Metagenome / Metatranscriptome Family F065641

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065641
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	103 residues
Representative Sequence	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP
Number of Associated Samples	103
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.72 %
% of genes near scaffold ends (potentially truncated)	29.13 %
% of genes from short scaffolds (< 2000 bps)	81.89 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.84

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.913 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (28.347 % of family members)
Environment Ontology (ENVO)	Unclassified (45.669 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.906 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.84
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.84
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SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.2: Ribonucleotide reductase-like	d1mxra_	1mxr	0.58918
f.61.1.1: Multidrug and toxic compound extrusion (MATE) transporters	d3mkua_	3mku	0.57996
d.144.1.0: automated matches	d2pywa_	2pyw	0.57862
a.25.1.2: Ribonucleotide reductase-like	d2uw1a_	2uw1	0.57744
a.102.4.4: Complement components	d3cu7ae	3cu7	0.56648

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00118	Cpn60_TCP1	36.22
PF00076	RRM_1	4.72
PF00166	Cpn10	2.36
PF01145	Band_7	1.57
PF00011	HSP20	1.57
PF01165	Ribosomal_S21	1.57
PF02566	OsmC	1.57
PF02237	BPL_C	1.57
PF00072	Response_reg	0.79
PF08281	Sigma70_r4_2	0.79
PF03099	BPL_LplA_LipB	0.79
PF00903	Glyoxalase	0.79
PF03958	Secretin_N	0.79
PF02142	MGS	0.79
PF00248	Aldo_ket_red	0.79
PF08279	HTH_11	0.79
PF01632	Ribosomal_L35p	0.79
PF00462	Glutaredoxin	0.79
PF02687	FtsX	0.79
PF01527	HTH_Tnp_1	0.79
PF03466	LysR_substrate	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	36.22
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	2.36
COG0340	Biotin-protein ligase	Coenzyme transport and metabolism [H]	2.36
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.57
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	1.57
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.57
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.57
COG0095	Lipoate-protein ligase A	Coenzyme transport and metabolism [H]	0.79
COG0291	Ribosomal protein L35	Translation, ribosomal structure and biogenesis [J]	0.79
COG0321	Lipoate-protein ligase B	Coenzyme transport and metabolism [H]	0.79

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.91 %
Unclassified	root	N/A	7.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.91 %
Unclassified	root	N/A	7.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.91 %
Unclassified	root	N/A	7.09 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	71.65 %
Unclassified	root	N/A	7.09 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	71.65 %
Unclassified	root	N/A	7.09 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	62.20 %
Unclassified	root	N/A	7.09 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	4.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	62.20 %
Unclassified	root	N/A	7.09 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	62.20 %
Unclassified	root	N/A	7.09 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	3.15 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	62.20 %
Unclassified	root	N/A	7.09 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	3.15 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	62.20 %
Unclassified	root	N/A	7.09 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3.15 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100402362	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	6865	Open in IMG/M
3300001213\|JGIcombinedJ13530_102820606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	717	Open in IMG/M
3300004052\|Ga0055490_10040471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1184	Open in IMG/M
3300004082\|Ga0062384_100560234	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	767	Open in IMG/M
3300004092\|Ga0062389_100092442	All Organisms → cellular organisms → Bacteria	2642	Open in IMG/M
3300004266\|Ga0055457_10008923	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
3300004463\|Ga0063356_101368717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1039	Open in IMG/M
3300005172\|Ga0066683_10386896	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300005172\|Ga0066683_10619367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	653	Open in IMG/M
3300005177\|Ga0066690_10000954	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10172	Open in IMG/M
3300005178\|Ga0066688_10106393	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300005179\|Ga0066684_10970454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300005180\|Ga0066685_10402756	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	950	Open in IMG/M
3300005340\|Ga0070689_100184899	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1694	Open in IMG/M
3300005340\|Ga0070689_100269359	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300005447\|Ga0066689_10167527	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300005451\|Ga0066681_10787554	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300005553\|Ga0066695_10120774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1618	Open in IMG/M
3300005554\|Ga0066661_10224302	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300005556\|Ga0066707_10677662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300005558\|Ga0066698_10344372	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1030	Open in IMG/M
3300005558\|Ga0066698_10508806	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	818	Open in IMG/M
3300005566\|Ga0066693_10223887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	739	Open in IMG/M
3300005568\|Ga0066703_10178146	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300005829\|Ga0074479_10010616	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300006031\|Ga0066651_10053953	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300006046\|Ga0066652_100420548	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300006755\|Ga0079222_12255789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	542	Open in IMG/M
3300006794\|Ga0066658_10427982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300006796\|Ga0066665_10066417	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2544	Open in IMG/M
3300006796\|Ga0066665_11158489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300006796\|Ga0066665_11223581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300006797\|Ga0066659_10092658	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300006800\|Ga0066660_10062619	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2486	Open in IMG/M
3300006800\|Ga0066660_10921563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	710	Open in IMG/M
3300006847\|Ga0075431_100578177	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1109	Open in IMG/M
3300006854\|Ga0075425_100306177	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300006903\|Ga0075426_10442257	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300007255\|Ga0099791_10627038	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300007775\|Ga0102953_1109798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1227	Open in IMG/M
3300009012\|Ga0066710_100673514	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1575	Open in IMG/M
3300009012\|Ga0066710_101381235	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1092	Open in IMG/M
3300009012\|Ga0066710_102028345	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	851	Open in IMG/M
3300009012\|Ga0066710_103608064	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300009111\|Ga0115026_11543766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300009147\|Ga0114129_10856137	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300009167\|Ga0113563_10371884	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1514	Open in IMG/M
3300009167\|Ga0113563_11038342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	945	Open in IMG/M
3300009167\|Ga0113563_11403141	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300009179\|Ga0115028_12103114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300009506\|Ga0118657_10152055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3300	Open in IMG/M
3300009506\|Ga0118657_11004862	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1020	Open in IMG/M
3300009506\|Ga0118657_12924944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300010166\|Ga0126306_11162486	Not Available	633	Open in IMG/M
3300010301\|Ga0134070_10063004	Not Available	1260	Open in IMG/M
3300010303\|Ga0134082_10040042	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1783	Open in IMG/M
3300010304\|Ga0134088_10288987	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
3300010329\|Ga0134111_10222669	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	768	Open in IMG/M
3300010335\|Ga0134063_10581880	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300010337\|Ga0134062_10350434	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	711	Open in IMG/M
3300010391\|Ga0136847_11073781	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300010391\|Ga0136847_12322562	All Organisms → cellular organisms → Bacteria	2348	Open in IMG/M
3300010397\|Ga0134124_10574600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1101	Open in IMG/M
3300010397\|Ga0134124_10864062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	908	Open in IMG/M
3300010397\|Ga0134124_11053598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	828	Open in IMG/M
3300010401\|Ga0134121_11949259	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	618	Open in IMG/M
3300010403\|Ga0134123_12358569	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300010412\|Ga0136852_10923363	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	832	Open in IMG/M
3300010412\|Ga0136852_11738639	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300012199\|Ga0137383_10385239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1027	Open in IMG/M
3300012201\|Ga0137365_10040696	All Organisms → cellular organisms → Bacteria	3547	Open in IMG/M
3300012201\|Ga0137365_10134564	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1858	Open in IMG/M
3300012201\|Ga0137365_10734991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300012205\|Ga0137362_11089598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	679	Open in IMG/M
3300012208\|Ga0137376_10622188	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	933	Open in IMG/M
3300012209\|Ga0137379_10178502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2036	Open in IMG/M
3300012209\|Ga0137379_10258863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1652	Open in IMG/M
3300012211\|Ga0137377_10522915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1124	Open in IMG/M
3300012232\|Ga0137435_1088989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	924	Open in IMG/M
3300012351\|Ga0137386_10990524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300012354\|Ga0137366_10523264	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	855	Open in IMG/M
3300012357\|Ga0137384_10279286	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300012358\|Ga0137368_10007559	All Organisms → cellular organisms → Bacteria	11270	Open in IMG/M
3300012359\|Ga0137385_10778120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	796	Open in IMG/M
3300012360\|Ga0137375_11463955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300012922\|Ga0137394_11341548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300012923\|Ga0137359_10748855	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	849	Open in IMG/M
3300012976\|Ga0134076_10207982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	823	Open in IMG/M
3300012976\|Ga0134076_10212288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	815	Open in IMG/M
3300014150\|Ga0134081_10086602	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	973	Open in IMG/M
3300014154\|Ga0134075_10417162	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300014157\|Ga0134078_10036566	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300014157\|Ga0134078_10507476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300015359\|Ga0134085_10064986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1477	Open in IMG/M
3300017657\|Ga0134074_1037021	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300018052\|Ga0184638_1086505	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300018053\|Ga0184626_10022337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2576	Open in IMG/M
3300018056\|Ga0184623_10062436	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300018072\|Ga0184635_10285965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300018433\|Ga0066667_10347306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1178	Open in IMG/M
3300018433\|Ga0066667_10615963	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	906	Open in IMG/M
3300018476\|Ga0190274_10905757	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	949	Open in IMG/M
3300019228\|Ga0180119_1161725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300020000\|Ga0193692_1040888	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1066	Open in IMG/M
3300020022\|Ga0193733_1005441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3647	Open in IMG/M
3300020579\|Ga0210407_10098430	Not Available	2221	Open in IMG/M
3300021478\|Ga0210402_10500998	Not Available	1128	Open in IMG/M
3300026196\|Ga0209919_1169576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300026310\|Ga0209239_1010257	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4994	Open in IMG/M
3300026312\|Ga0209153_1106935	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300026327\|Ga0209266_1256747	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300026329\|Ga0209375_1191132	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	792	Open in IMG/M
3300026343\|Ga0209159_1040693	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2377	Open in IMG/M
3300026536\|Ga0209058_1177958	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	938	Open in IMG/M
3300026538\|Ga0209056_10117037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2127	Open in IMG/M
3300026540\|Ga0209376_1075074	All Organisms → cellular organisms → Bacteria	1820	Open in IMG/M
3300026548\|Ga0209161_10216297	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1041	Open in IMG/M
3300026552\|Ga0209577_10143731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1884	Open in IMG/M
3300027533\|Ga0208185_1014993	All Organisms → cellular organisms → Bacteria	1933	Open in IMG/M
3300031576\|Ga0247727_10006906	All Organisms → cellular organisms → Bacteria	21991	Open in IMG/M
3300032144\|Ga0315910_10006525	All Organisms → cellular organisms → Bacteria	9402	Open in IMG/M
3300033418\|Ga0316625_101210132	Not Available	693	Open in IMG/M
3300033521\|Ga0316616_101522001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	868	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.06%
Host-Associated	Host-Associated	3.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.38%
Aquatic	Environmental → Aquatic	19.68%
Plants	Host-Associated → Plants	3.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.59%
Freshwater	Environmental → Aquatic → Freshwater	7.87%
Sediment	Environmental → Aquatic → Sediment	7.09%
Marine	Environmental → Aquatic → Marine	4.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.15%
Cave	Environmental → Terrestrial → Cave	0.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.09%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.15%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.36%
Lake	Environmental → Aquatic → Freshwater → Lake	1.57%
Loam	Environmental → Terrestrial → Soil → Loam	1.57%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	33.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.09%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	3.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.15%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.36%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.57%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.51%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.15%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.15%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.94%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.36%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	2.36%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.57%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.57%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.57%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.57%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.57%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.79%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004266	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007775	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300026196	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1004023621	3300000956	Soil	MQPTATMNFTDSQLQKCYERNFAEAGGLSDELRQVRALIAAHDLFHMLEGSHSSRVHETIEHLLVPGLRPGLRRWYQRPDAERDATAVVLRDHLSQLAGERLEPAAAA
JGIcombinedJ13530_1028206062	3300001213	Wetland	MNFTDPQLQKCYEKHFAEAPEFPGELRQVRALIAAHDLFQMLEGPHSSRVHETIWHLLLPKLRPGLRCWFQRAGADKDFTAVALRDHLSQLAGEKLEP*
Ga0055490_100404713	3300004052	Natural And Restored Wetlands	LCLFWPGVVGTFLLHRGRIVNFTDPQLQRCYESHFVGAGNFSDEVRQVRALIAVHDWFQMLEGPHSSRVHETMEHLLLPELRPGLRRWYQLSDAEKNPTATALRDHLSQLAGEKLDKTHSA*
Ga0062384_1005602342	3300004082	Bog Forest Soil	MKFTDPQLQKCYENNFTEGGGFSDELRQVRALIAVCEVFQMFEGTHSWRVHETIERLLAPELRPGLRRWYQRAGADKDSAGVALRDRLSRLAGEKLEKLTGIPHNPS*
Ga0062389_1000924424	3300004092	Bog Forest Soil	MNFTDPQLQKCYERNFTEVGVFPDELRQVRALIAVYEVFQMFEGTHSSRVHETIEHLLLPELRPGLRHWYQRAGADKDATAITLRDRLSQLAGEKFENITDIPHKPS*
Ga0055457_100089233	3300004266	Natural And Restored Wetlands	MIFTDPQLQKCYDSNFAEAGDLSNELRQVRALVAVHDVFQAFEGPHSARVHETLEHLLRPELRPGLRAWFQRPYTGSDSAAIALRDHLSQLTGERLESNSLSASEPA*
Ga0063356_1013687172	3300004463	Arabidopsis Thaliana Rhizosphere	VNFTDSQLQKCYENLFAEAGHFPEELRQVRALIGVHDLFQMLEGPHSTRVHETIWQLLLPGLRPGLRGWYARPGAEKDFAAVSLRDRLSQLAGERLETTTDIPDNPS*
Ga0066683_103868962	3300005172	Soil	MPPGRVVNFTDSQLQDCYERNFAAVTDLSTELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0066683_106193671	3300005172	Soil	VVNFTDPQLQDSYDRNFAAVVDCSDERRQVRALIAAHDSFRLIEGPHSPRVHETIEHLLLPGLRPVLRSWYQRSGADTNSAAIDFRDQLSQLAGEKLENNNGYSS*
Ga0066690_100009542	3300005177	Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLGPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0066690_109204241	3300005177	Soil	MSHRTQDCSASWSKFRFPWPGVADTLPLPRGRVVNFTASQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPWLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0066688_101063932	3300005178	Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLGPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP
Ga0066684_109704541	3300005179	Soil	NFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0066685_104027562	3300005180	Soil	VNFTDSQLKDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0066678_101934643	3300005181	Soil	LFKSFQGFTGHTGHRTVQRPGRNSGSLWPGVADTFPLPRERVVNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0070689_1001848992	3300005340	Switchgrass Rhizosphere	MNFTDAQLELCYERNFVASAELAEEVREVCALIAAHDVFLMMEGPHSSKVHETIERLLMPELRSVLHRWYQRAGADLHPAAIELRDRLSHLAGERLEIGYAT*
Ga0070689_1002693592	3300005340	Switchgrass Rhizosphere	VNFTDPQLQKCYESNLTGAAGFSDELRQVSALIAAHDLFQMLEGSHSARVHETIERLLLPELRLALRCWYQRSEAEADLKSAAVGFRDQLSQLAGERLEEVRMFP*
Ga0066689_101675272	3300005447	Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRNHLSHLTGERLEP*
Ga0066681_107875542	3300005451	Soil	TDPQLQKCYESNFTGAGGISDEVRQVRALIAVHDLFQMLEGPHSSRVHEAIEHLLLPGLRPELRRWYQRCGGDKDRSAVALRDHLSRLAGERFEPQSTCCL*
Ga0066695_101207741	3300005553	Soil	DCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0066661_102243022	3300005554	Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0066707_106776622	3300005556	Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNLAAVALRDHLSQLAGERLEP*
Ga0066698_103443723	3300005558	Soil	MPPGRVVNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0066698_105088062	3300005558	Soil	VNFTDSQLQDCYDRNFAAVTDYSDELRQVRALITAHDLFRMIEGPHSPRVHETIEHLLLPGLRPVLRSWYQRSGADTNLAAIDFRDQLSQLAGENLEKNSGYSS*
Ga0066693_102238872	3300005566	Soil	VNFTDPQLQDCYERNFAVVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0066703_101781462	3300005568	Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLGPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERL
Ga0074479_100106161	3300005829	Sediment (Intertidal)	GRIVNFTDPQLQKCYESHFVGAGGFSDEVRQVRALISLHDWFQMLEGPHSSRVHETMEQLLLPELRPGLRRWYQLDAEKDPAATVLRDRLSQLAGERLEDHSGCAP*
Ga0066651_100539532	3300006031	Soil	MPPGRVVNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLGPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0066652_1004205482	3300006046	Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGPETNPAAVALRDHLSQLANAPEAG*
Ga0079222_122557891	3300006755	Agricultural Soil	NFTDSQLQKCYERNFAEVADLCVELRQVSALIAAHDLFRLMEGPHSVRVHEVIEHLLLPGLRPVLRSWYQRPGADMNSQEVGLRDQLSQLAGERL*
Ga0066658_104279821	3300006794	Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAEERLEP*
Ga0066665_100664175	3300006796	Soil	YERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0066665_111584892	3300006796	Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLGPGLRPGLRRWYQRSGAETNPAAVALR
Ga0066665_112235812	3300006796	Soil	VNFTDPQLQKCYESNFTGAGGISDEVRQVRALIAVHDLFQMLEGPHSSRVHEAIDHLLLPGLRPELRRWYQRSGGDKDPSAVALRDHLSRLAGERFEPQSRCRL*
Ga0066659_100926584	3300006797	Soil	VNFTASQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0066660_100626191	3300006800	Soil	MPPGRVVNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERSRCL*
Ga0066660_109215631	3300006800	Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHL
Ga0075431_1005781773	3300006847	Populus Rhizosphere	MNRDIQPTPMMNFADSQLQKCYERNFAEAGGFSDELRQVRALIAVHDLFQMLEGSHSSRVHETIGHLLVPGLRPGLRRWYQRPDADRDPTAVALRDHLSRLAGEKLEPAAVA*
Ga0075425_1003061772	3300006854	Populus Rhizosphere	MVNFTDSQLQKCYERNFAEVADLCVELRQVSALIAAHDLFRLMEGPHSVRVHEVIEHLLLPGLRPVLRSWYQRPGADMNSEEVGLRDQLSQLAGERL*
Ga0075426_104422572	3300006903	Populus Rhizosphere	MVNFTDSQLQKCYERNFAEVTDLCVELRQVSALIAAHDLFRLMEGPHSLRVHEVIEHLLLPGLRPVLRSWYQRPGADMNSQEVGLRDQLSQLAGERL*
Ga0099791_106270382	3300007255	Vadose Zone Soil	MNFNDKQLQACFECNFAEAKGASDEARKVGALIATHDLFQMLEGPHSSRVHEAIWLLLLPKLRPGLRAWYRRSGAEINPAAIELRDHLSQLAGERLEKDTTHSLGA*
Ga0102953_11097983	3300007775	Soil	MNFTDPQLQKCYESNLAEAGSFPGEERQVRALIATHEVFLMFEGAHSSRVHETIEHLLLPGLRPELRRWYQRTDAEKDLSAVVLRDHLSQLAGEKLESTTNTPDNNVEHGQSSRDI*
Ga0066710_1006735143	3300009012	Grasslands Soil	MNFTDPLLQKCYETNLTHAGGFSGELPHVRALIAAHDLFQMLEGPHSPRVHETIEHLLLPALRPVLRSWYQRPGADTNSTTIEFRDHLSELAGERF
Ga0066710_1013812352	3300009012	Grasslands Soil	VNFTDPQLQKCYERNLTGAGGFSDELRQISALIAAHDLFQMLEGSHSARVHETIERLLLPELRPGLRCWYQQSEADLNPAAVGFRDQLSQLAGERLEDVTHVPLNPS
Ga0066710_1020283452	3300009012	Grasslands Soil	FRLPLGRIVNFTDPQLQKCYESNFTGAGGISDEVRQVRALIAVHDLFQMLEGPHSSRVHEAIEHLLLPGLRPELRRWYQRSGGDKDRSAVALRDHLSRLAGERFEPQSTCCL
Ga0066710_1036080641	3300009012	Grasslands Soil	VNFTDPQLQDCCDRSFAAVVDCSDERRQVRALIAAHDSFRLIEGPHSPRVHETIEHLLLPGLRPVLRSWYQRSGADMNSAAIDFRDQLSQLAGEKLENNNGYSS
Ga0115026_115437662	3300009111	Wetland	MNFTDPQLQKCYESNFAEAGGFSDDLRQICALIGVHGLFQMLEGSHSPRVHETIWHLLLPKLRPGLRRWYQRSGAAKDPTAVALR
Ga0114129_108561371	3300009147	Populus Rhizosphere	MEPGNLQPTPMMNFTDSQLQKCYERNFAEAGGFSDELRQVRALIAAHDLFHMLEGSHSSRVHETIEHLLVPGLRPGLRRWYQRPDADRDATAVVLRDHLSQLAGKKLENIPAISHEPL*
Ga0113563_103718843	3300009167	Freshwater Wetlands	VNFTDSQLQKCYESHFIGAGGFTVEVRQVRALIAVHDWFQMLEGLHSSRVHETMEHLLLPELRPGLRRWYQLDAEKDPAATALRDQLSQLAGERLEDHGGCSP*
Ga0113563_110383421	3300009167	Freshwater Wetlands	MNFTDPQLQKCYESNFAEAGGFSDDLRQICALIGVHGLFQMLEGSHSPRVHETIWHLLLPKLRPGLRRWYQRSGAAKDPTAVALRDHLSQLAGEKLGDKTGIPHHPS*
Ga0113563_114031411	3300009167	Freshwater Wetlands	QLQKCYESNFAEAGGFSDDLRQICALIGVNGLFQMLEGSHSQRVHETIWHLLLPKLRPGLRRWYQRSGAAKDPTAVALRDHLSQLAGEKLGDKTGFPHHPS*
Ga0115028_121031141	3300009179	Wetland	VNFTDSQLQKCYESHFIGAGGFSVEVRQVRALIAVHDWFQMLEGPHSSRVHDTMEHLLLPELRPGLRRWYQLDAEQDSAATSLRDHLSQLAGEKLEDHRGCSP*
Ga0118657_101520553	3300009506	Mangrove Sediment	MNFTDPQLQLCYEKHFAEACDVSPEFRQVHALIAAHDFFHMLEGPHSPRVHETIWHLLLPTLRPALCRWYRSSGAAKNSTAIALRDHLSRLAGETLENPADIPNNPPEAPDVFLALPKK*
Ga0118657_110048622	3300009506	Mangrove Sediment	MNFTDPQLQLCYEKHFAEACDASPEFRQVRALIAAHDFFHMLEGPHSSRVHETIWHLLLPRLRWGLHCWFLRAGAETDPATIEFRDRLGQLAGEKLGP*
Ga0118657_129249441	3300009506	Mangrove Sediment	KNDPTSIQKKPFFEHDMNFTDPQLQKCYEKHFAEPCDVSAELRQVRALIAAHDLFQMLEGPHSSRVHEAIWHLLLPKLRPALRRWYRGSGAANNSTAIALRDHLSRLAGETLENPADIPHNPPGAQDVFLALQKK*
Ga0126306_111624862	3300010166	Serpentine Soil	LQKSYESNFTEAADSSDQQRQVRALIAMHDLFQTLEGPHSSRVHQTIEHLLLPQLRAVLRSWYQRSGADTNSAAINLRDQLSQLAGEKLEQEHLSRNALVLT*
Ga0134070_100630042	3300010301	Grasslands Soil	MPPGRVVNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPELRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0134082_100400422	3300010303	Grasslands Soil	VNFTDSQLQDFYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0134088_102889871	3300010304	Grasslands Soil	VNFTDSQLQDCYERNFAAVTDLSTELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0134086_101874252	3300010323	Grasslands Soil	VNVTDPQLHKCYESNFTGARGIPDEVRKVRALIAVHDLIQMLEGPHSSRVHEAIEHLLLPGLRPELRRWYQRPGGDKDRSAVAL
Ga0134111_102226692	3300010329	Grasslands Soil	PGVADTFRLPLGRIVNFTDPQLQKCYESNFTGAGGISDEVRQVRALIAVHDLFQMLEGPHSSRVHEAIDHLLLPGLRPELRRWYQRSGGDTDPSAVALRDHLSRLAGERFEPQSTCRL*
Ga0134063_105818801	3300010335	Grasslands Soil	FRFPWPGVADTFPLPRGRVVNFTDSQLKDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0134062_103504341	3300010337	Grasslands Soil	MPPGRVVNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLGPGLRPGLRRWYRCSGAETNPAAVALRDHLSQLAGERLEP*
Ga0136847_110737811	3300010391	Freshwater Sediment	VNFTDAQLQECYHRNFATSTGFSDELRPVCSLIAVHDFFQMIEGPHSGRVHETIEHLLSPGLRPRLRAWYRRRGAEMNHAAIQFRDQLSQLAGERLENAADLPLNPS*
Ga0136847_123225622	3300010391	Freshwater Sediment	VIAVNFTDSQLQECYEGDFAALPDFSAEQRQVRALITVHDLFEMLEGPHSSRVHETIEHLLLPRMRPGLRRWYQRPDAEKDPATIALRDHLSKLTGEKLEDITNTPHNQS*
Ga0134124_105746003	3300010397	Terrestrial Soil	MNFTDPLLQKCYESNFTQAGGLSDEQSHVRALIAAHDLFQMLEGPHSPRVHETIEHLLLPGLRPVLRNWYQRSGAETNPAAVEFRDQLNQLAGERLERG*
Ga0134124_108640622	3300010397	Terrestrial Soil	MHFTDPQLQDCYNRNFVAVADYPDELRQVRALIAAHDLFRLMEGPHSPRVHEAIEHLLLPGLRPVLRNWYQRSGADTSSTAVEFREQLNQLAGERLEHN*
Ga0134124_110535982	3300010397	Terrestrial Soil	VNFTDPQLQKCYESNLTGAGGLSDELRQVSALIAAHDLFQMLEGSHSARVHETIERLLLPELRLALRCWYQRSEADLSSAAAGFRDQLSQLAGERLEEKERE*
Ga0134121_119492591	3300010401	Terrestrial Soil	DPQLQDCYDRNFGALADDSPEVREVRALIAAHDFFRRFEGPHSRRVHETIDHLLSQGLRPALRFWYQRSAADTDSVATHLRDQLSQLTGEKLEVNNGHSSQPAAIGDTKIKGN*
Ga0134123_123585692	3300010403	Terrestrial Soil	VNFTDPQLQKCYDSHFIGAGGFSDDLRQVRALIAVHDWFRMLEGPHSSRVHETMEHLLLPELRPGLRRWYQRSDADKDTSAVALRDHLSQLTGEKLDKAHAA*
Ga0136852_109233633	3300010412	Mangrove Sediment	MNFTDPQLQKCYEKHFAEDCDVSAELRHVRALIAAHDLFQMLEGPHSSRVHETIWHLLLPKLRPALRRWYRGSGAAKNSTAIALRDHLSRLAGETLENDVDIPHNPPEAPDVF
Ga0136852_117386392	3300010412	Mangrove Sediment	MNFTDPPLQKCYQKHYAEACDVSAELREVRALIAAHDLFQMLEGPHSSRVHETIWHLLLPRLRPALRRWYRGSGAVRSSTAIVLRDHLSRLAGETLENPADIPHNPPGAHDVFLALPQK*
Ga0137383_103852392	3300012199	Vadose Zone Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPWLRPGLRRWYQRSGAETNPAAVALRGHLSQLAGERLEP*
Ga0137365_100406963	3300012201	Vadose Zone Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRGHLSQLAGERLEP*
Ga0137365_101345642	3300012201	Vadose Zone Soil	VNFTDPQLQKCYERNLTGAGGFSDELRQISALIAAHDLFQMLEGSHSARVHETIERLLLPELRPGLRCWYQRSEADLNPAAVGFRDQLSQLAGERLEDVTHVPLNPS*
Ga0137365_107349911	3300012201	Vadose Zone Soil	RMVNFTDPRLQKCYESHFIGVGGFPYEVRQVRALIAVHDWFQMLEGPHSLRVHETMEHLLLPELRPGLRRWYQLSGAEKDPAAIALRDHLSHLAGENLETMVDATFNSS*
Ga0137362_110895982	3300012205	Vadose Zone Soil	MNFTDSQLQECYERNYAEVSGFSDGLRQVCALIAAHDFFQMLEGPHSARVDETIEQLLLPGLRPGLREWFRLCSAEMNPAAISFREQLSHLAGERLEIPNGMLLNPS*
Ga0137376_106221882	3300012208	Vadose Zone Soil	MYFTDSQLQECYEGNFAEAADLSGELRRVHALIAVHDWFQMLEGPHSLRVHETIEHLLVPELRSVLHRWYQRAGADLNPAAIEFRDHLSQLAGERLETGFAP*
Ga0137379_101785022	3300012209	Vadose Zone Soil	MNFTDSQLQECYERNYAEVSGFSDGLRQVCALIAAHDFFQMLEGPHSVRVHETIEQLLLPGLRPGLREWFRLCSAEMNPAAMSFREQLSHLAGERLEVPNGMLLNPS*
Ga0137379_102588632	3300012209	Vadose Zone Soil	VNFTASQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSPRVHETIEHLLVPWLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0137377_105229151	3300012211	Vadose Zone Soil	MNFTDSQLQECYERNYAEVSGFSDGLRQVCALIAAHDFFQMLEGPHSARVHETIEQLLLPGLRPGLREWFRLCSAEMNPAAIGFREQLSHLAGE
Ga0137435_10889891	3300012232	Soil	MNFADPQLQKCYESNLAEAGGSFDELRQVRAMIATHELFEMLEGSHSPRVHETIEHLLLPGLRPELRRWYQRSAANTDPTAVALRDHLSQLAGEKLEHPMDIPGNPS*
Ga0137387_101331942	3300012349	Vadose Zone Soil	MNFTDSQLQECYERNYAELIGFSDGLRQVCALIAAHDFFQMLEGPHSARVHETIEQLLLPGLRPGLREWFRLCSAEMNPAAIGFREQLSHLAGERLEVPNGMLLNPS*
Ga0137386_109905241	3300012351	Vadose Zone Soil	VNFTDPHLQKCYESNLIEAGDSSAEQRQVRALIAMHDSFQILEGPHSSRVHETIEHLLLPGLRPGLRRWYRRSDADINPSAINLRDHLSQLAGEKLE*
Ga0137366_105232642	3300012354	Vadose Zone Soil	VNFTDPQLQKCYESHFIGAGGFSNEVRQVRALIAVHDWFQMLEGPHSSRVHETMDHLLLPELRPGLRRWYQLSGADKDPTAVALREHLSQLAGERLEIITDILHHPS*
Ga0137384_102792862	3300012357	Vadose Zone Soil	VNFTASQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSPRVHETIEHLLVPGLRPGLRRWYQCSGAETNPAAVALRDHLSQLAGERLEP*
Ga0137368_100075596	3300012358	Vadose Zone Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVDETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0137385_107781202	3300012359	Vadose Zone Soil	VNFTASQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSPRVHETIEHLLVPWLRPGLRRWYQRSGAETNPAAVALRDHLS
Ga0137375_114639552	3300012360	Vadose Zone Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVDETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQL
Ga0137394_113415481	3300012922	Vadose Zone Soil	IRPAGLRSDRTKVHRFAMKPGIQPTPIMNFTDSQLQECYERNLTEAGGFSDELRQVSALIAVHDLFQMLEGSHSSRVHETIEHLLVPGLRPGLRRWYQRSGAENDPTAVALRDHLSRLAGEKLENIILSA*
Ga0137359_107488551	3300012923	Vadose Zone Soil	QECYEGNFAEAADLSGELRRVHALIAVHDWFQMLEGPHSLRVHETIEHLLVPELRSVLHRWYQRAGADLNPAAIEFRDHLSQLAGERLETGFAP*
Ga0134076_102079822	3300012976	Grasslands Soil	VNFTDSQLQDCYDRNFAAVTDYSDELRQVRALITAHDLFRMIEGPHSPRVHETIEHLLLPGLRPVLRSWYQRSGADTNLAAIDFRDQLSQLAG
Ga0134076_102122882	3300012976	Grasslands Soil	VCIVNFTDPQLQKCYESNFTGAGGISDEVRQVRALIAVHDLFQMLEGPHSLRVHETMEHLLWPELRPGLRRWYQLSGAEKDPAAIALRDHLSQLAG
Ga0134081_100866022	3300014150	Grasslands Soil	MPPGRVVNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSHLAGERLEP*
Ga0134075_104171621	3300014154	Grasslands Soil	MNFTDSQLKDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLGPGLRPGLRRWYRCSGAETNPAAVALRDHLSQLAGERLEP*
Ga0134078_100365661	3300014157	Grasslands Soil	MPPGRVVNFTDSQLRDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEMDPEFRTVT*
Ga0134078_105074761	3300014157	Grasslands Soil	VNFTDPQLQKCYESNFTGAGGISDVVRQVRALIAVHDLFQMLEGPHSSRVHEAIEHLLLPGLRPELRRWYQRSGGDKDRSAVALRDHLSRLAGERFEPQSTCCL*
Ga0134085_100649862	3300015359	Grasslands Soil	VNFTDSQLKDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLGPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP*
Ga0134074_10370212	3300017657	Grasslands Soil	MPPGRVVNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLGPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP
Ga0184638_10865052	3300018052	Groundwater Sediment	VNFTDSQLQECFERKFAALPNLSAEQRQVGVLIAEHDLFEMLEEPHSSRVHETIEHLRLPRMRPGLRRWYQRSDAEKDPATIAL
Ga0184626_100223374	3300018053	Groundwater Sediment	VSAVNFTDSQLQECFERKFAALPNLSAEQRQVGVLIAEHDLFEMLEEPHSSRVHETIEHLRLPRMRPGLRRWYQRSDAEKDPATIAL
Ga0184623_100624362	3300018056	Groundwater Sediment	VNFTDSQLQDCYDRDFAAVTDYSDELRQVRALITAHDLFRMIEGPHSPRVHETIEHLLLPGLRPVLRSWYQRSGADTNLAAIDFRDQLSQLAGENLEKNNGYSS
Ga0184635_102859651	3300018072	Groundwater Sediment	VNFTDPQLQKCYESNLTGAGGFTDELRQVSALIAAHDLFQMLEGSHSARVHETIERLLLPELRLALRCWYQRSEADLNSAVGFRDQLSQLAGERLEAVRDVPLNPS
Ga0066667_103473062	3300018433	Grasslands Soil	MPPGRVVNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP
Ga0066667_106159632	3300018433	Grasslands Soil	MNFTDSQLQECYERNYAEVSGFSDGLRQVCALIAAHDFFQMLEGPHSARVHETIEQLLLPGLRPGLREWFRLCSAEMNPAALGFREQLSHLAGERLEIPNGMLLNPS
Ga0190274_109057571	3300018476	Soil	MLSFTDPQLRKCYESNFDDAAGSSGELRQVRALIATHDLFRMLEGPHSSRVHETIWHLLLPKLRQGLRQWYQRSDADKGPTADQLRDHLSLMAGERLGDKMD
Ga0180119_11617251	3300019228	Groundwater Sediment	GRVVNFTDPQLQKCYDRNFAEAAESSGELRQVAALIAAHDVFRLMEGPHSPRVHEAIEHILLPTLRPVLRRWYQRADAEMNPAAIEFRDHLSQLAGERL
Ga0193692_10408882	3300020000	Soil	VNFTDPQLQKCYDRNLAAAPESSGELRQVGALIAAHDVFRMMEGPHSPRVHEAIEHLLLPTLRPGLRNWYRRPGAEADSAATEFRDQLSQLAGERLEIHAAQPA
Ga0193733_10054412	3300020022	Soil	MPPGRLVNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQHSGAETNPAAVALRDHLSQLAGERLEP
Ga0210407_100984302	3300020579	Soil	MSFTDPQLQKYYEANLTDAGGLSDELCQVRALIAVHDLAQRLEGPESSRVHETIWHLLLPKLRSGLRRWYQRPGAEQDFAAVALREHLSQLAGEKLENNNEHST
Ga0210402_105009982	3300021478	Soil	MNFTDPQLQRYYEANLTDAGGLSDELCQVRALIAVHDLAQRLEGPQSSRVHETIWHLLLPKLRSGLRRWYQRPGAEQDFAAVALREHLSQLAGEKLENNNEHST
Ga0209919_11695761	3300026196	Soil	DPQLQKCYESNLAEAGSFPGEERQVRALIATHEVFLMFEGAHSSRVHETIEHLLLPGLRPELRRWYQRTDAEKDLSAVVLRDHLSQLAGEKLESTTNTPDNNVEHGQSSRDI
Ga0209239_10102573	3300026310	Grasslands Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP
Ga0209153_11069352	3300026312	Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSSAETNPAAVALRDHLSQLAGERLEP
Ga0209266_12567471	3300026327	Soil	MPPGRVVNFTDSQLQDCYERNFAAVTDLSTELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERLEP
Ga0209375_11911321	3300026329	Soil	MPPGRVVNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAV
Ga0209159_10406932	3300026343	Soil	VNFTDPQLQKCYESNFTGAGGISDEVRQVRALIAVHDLFQMLEGPHSSRVHEAIEHLLLPGLRPELRRWYQRSGGDKDRSAVALRDHLSRLAGERFEPQSTCCL
Ga0209058_11779582	3300026536	Soil	VNFTDPQLQDSYDRNFAAVVDCSDERRQVRALIAAHDSFRLIEGPHSPRVHETIEHLLLPGLRPVLRSWYQRSGADTNLAAIDFRDQLSQLAGENLEKNSGYSS
Ga0209056_101170371	3300026538	Soil	YERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNLAAVALRDHLSQLAGERLEP
Ga0209376_10750742	3300026540	Soil	MPPGRVVNFTDSQLQDCYERNFAAVTDLSTELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLANAPEAG
Ga0209161_102162971	3300026548	Soil	IVNFTDPQLQKCYESNFTGAGGISDEVRQVRALIAVHDLFQMLEGPHSSRVHEAIEHLLLPGLRPELRRWYQRSGGDKDRSAVALRDHLSRLAGERFEPQSTCCL
Ga0209577_101437312	3300026552	Soil	VNFTDSQLQDCYERNFAAVTDLSAELRQVRALIGAHDLFQMLEGPHSSRVHETIEHLLVPGLRPGLRRWYQRSGAETNPAAVALRDHLSQLAGERSRCL
Ga0208185_10149931	3300027533	Soil	VNFTDPQLQKCYDRNFAEAAESSGELRQVAALIAAHDVFRLMEGPHSPRVHEAIEHILLPTLRPVLRRWYQRADAEMNPAAIEFRDHLSQLAGERL
Ga0247727_1000690617	3300031576	Biofilm	MNFTDPQLQECYQRNFAEAGNPSDELRQIRALITVHDLFQMLEGSHSARVHETIEHLLLPELRPTLRSWYQRSDADRNPAAVAFRNHLSRLAGEKLENVADNPHDPP
Ga0315910_100065255	3300032144	Soil	MNFTDPQLQKCYESNFVATDGSSSELRQVRALVAAHDLFRMLEGPHSSRVHETIWHLLLPKLRPGLRQWYQRSDVDKGPAADPLRDQLSLMAGEKLEEKMGTPHKPVLSL
Ga0316625_1012101322	3300033418	Soil	GRIVNFTDSQLQKCYESHFIGAGGFPVEVRQVRALIAVHDWFQMLEGTRSSRVHETMEHLLLPELRPGLRRWYQLDAEKDPAATALRDQLSQLAGERLEDHGGCSP
Ga0316616_1015220011	3300033521	Soil	VNFTDSQLQKCYESHFIGAGGFPVEVRQVRALIAVHDWFQMLEGPHSSRVHETMEHLLLPELRPGLRRWYQLDAEKDPAATALRDQLSQLAGERLEDHGGCSP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065641

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences