Metagenome Family F065660

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065660
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	67 residues
Representative Sequence	MSSAEKPASKSRSRLDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Number of Associated Samples	83
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	88.89 %
% of genes near scaffold ends (potentially truncated)	22.05 %
% of genes from short scaffolds (< 2000 bps)	55.91 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (92.126 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil (29.921 % of family members)
Environment Ontology (ENVO)	Unclassified (53.543 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.630 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.43% β-sheet: 0.00% Coil/Unstructured: 28.57%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01619	Pro_dh	40.94
PF03745	DUF309	18.11
PF00465	Fe-ADH	8.66
PF00248	Aldo_ket_red	7.09
PF04209	HgmA_C	3.15
PF12840	HTH_20	2.36
PF01557	FAA_hydrolase	0.79
PF09861	Lar_N	0.79
PF01637	ATPase_2	0.79
PF01738	DLH	0.79
PF00005	ABC_tran	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0506	Proline dehydrogenase	Amino acid transport and metabolism [E]	40.94
COG1547	Predicted metal-dependent hydrolase	Function unknown [S]	18.11
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	8.66
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	8.66
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	8.66
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	8.66
COG3508	Homogentisate 1,2-dioxygenase	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.15
COG1373	Predicted ATPase, AAA+ superfamily	General function prediction only [R]	0.79
COG1672	Predicted ATPase, archaeal AAA+ ATPase superfamily	General function prediction only [R]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	92.13 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.09 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	3.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.57 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	2.36 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1.57 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.79 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	2.36 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1.57 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2.36 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1.57 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.79 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2.36 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1.57 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.79 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2.36 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1.57 %
Geminocystaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Geminocystaceae	0.79 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2.36 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1.57 %
Cyanobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Geminocystaceae → Cyanobacterium	0.79 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2.36 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1.57 %
Cyanobacterium stanieri	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Geminocystaceae → Cyanobacterium → Cyanobacterium stanieri	0.79 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.79 %
Unclassified	root	N/A	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10001753	All Organisms → cellular organisms → Bacteria	7031	Open in IMG/M
3300002558\|JGI25385J37094_10098491	All Organisms → cellular organisms → Archaea	871	Open in IMG/M
3300002560\|JGI25383J37093_10001353	All Organisms → cellular organisms → Bacteria	6773	Open in IMG/M
3300002560\|JGI25383J37093_10027718	All Organisms → cellular organisms → Archaea	1898	Open in IMG/M
3300002560\|JGI25383J37093_10044592	All Organisms → cellular organisms → Archaea	1450	Open in IMG/M
3300002561\|JGI25384J37096_10008050	All Organisms → cellular organisms → Archaea	3941	Open in IMG/M
3300002561\|JGI25384J37096_10235668	All Organisms → cellular organisms → Archaea	535	Open in IMG/M
3300002562\|JGI25382J37095_10036474	All Organisms → cellular organisms → Archaea	1926	Open in IMG/M
3300002562\|JGI25382J37095_10067832	All Organisms → cellular organisms → Archaea	1335	Open in IMG/M
3300002562\|JGI25382J37095_10193357	All Organisms → cellular organisms → Archaea	618	Open in IMG/M
3300002562\|JGI25382J37095_10272716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Geminocystaceae → Cyanobacterium → Cyanobacterium stanieri	509	Open in IMG/M
3300002908\|JGI25382J43887_10009811	All Organisms → cellular organisms → Archaea	4822	Open in IMG/M
3300002908\|JGI25382J43887_10011807	All Organisms → cellular organisms → Archaea	4467	Open in IMG/M
3300002908\|JGI25382J43887_10072501	All Organisms → cellular organisms → Archaea	1859	Open in IMG/M
3300002908\|JGI25382J43887_10091313	All Organisms → cellular organisms → Archaea	1622	Open in IMG/M
3300002909\|JGI25388J43891_1018343	All Organisms → cellular organisms → Archaea	1246	Open in IMG/M
3300002911\|JGI25390J43892_10003940	All Organisms → cellular organisms → Archaea	3273	Open in IMG/M
3300002911\|JGI25390J43892_10075894	All Organisms → cellular organisms → Archaea	767	Open in IMG/M
3300002912\|JGI25386J43895_10043473	All Organisms → cellular organisms → Archaea	1307	Open in IMG/M
3300005167\|Ga0066672_10619754	All Organisms → cellular organisms → Archaea	700	Open in IMG/M
3300005174\|Ga0066680_10000674	All Organisms → cellular organisms → Archaea	12235	Open in IMG/M
3300005174\|Ga0066680_10075409	All Organisms → cellular organisms → Archaea	2026	Open in IMG/M
3300005174\|Ga0066680_10552402	All Organisms → cellular organisms → Archaea	723	Open in IMG/M
3300005176\|Ga0066679_10904680	All Organisms → cellular organisms → Archaea	555	Open in IMG/M
3300005177\|Ga0066690_10485394	All Organisms → cellular organisms → Archaea	833	Open in IMG/M
3300005180\|Ga0066685_10330952	All Organisms → cellular organisms → Archaea	1056	Open in IMG/M
3300005180\|Ga0066685_10933823	All Organisms → cellular organisms → Archaea	578	Open in IMG/M
3300005186\|Ga0066676_10043983	All Organisms → cellular organisms → Archaea	2507	Open in IMG/M
3300005445\|Ga0070708_101127182	All Organisms → cellular organisms → Archaea	734	Open in IMG/M
3300005451\|Ga0066681_10389553	All Organisms → cellular organisms → Archaea	857	Open in IMG/M
3300005468\|Ga0070707_100000366	All Organisms → cellular organisms → Archaea	44647	Open in IMG/M
3300005468\|Ga0070707_100085357	All Organisms → cellular organisms → Archaea	3052	Open in IMG/M
3300005536\|Ga0070697_100588225	All Organisms → cellular organisms → Archaea	978	Open in IMG/M
3300005540\|Ga0066697_10018047	All Organisms → cellular organisms → Archaea	3783	Open in IMG/M
3300005552\|Ga0066701_10098980	All Organisms → cellular organisms → Archaea	1700	Open in IMG/M
3300005553\|Ga0066695_10218267	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1199	Open in IMG/M
3300005555\|Ga0066692_10005690	All Organisms → cellular organisms → Archaea	5536	Open in IMG/M
3300005556\|Ga0066707_10929204	All Organisms → cellular organisms → Archaea	532	Open in IMG/M
3300005557\|Ga0066704_10920490	All Organisms → cellular organisms → Archaea	540	Open in IMG/M
3300006755\|Ga0079222_10125154	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1409	Open in IMG/M
3300006791\|Ga0066653_10066624	All Organisms → cellular organisms → Archaea	1546	Open in IMG/M
3300006797\|Ga0066659_10943850	All Organisms → cellular organisms → Archaea	721	Open in IMG/M
3300006804\|Ga0079221_10907326	All Organisms → cellular organisms → Archaea	648	Open in IMG/M
3300006903\|Ga0075426_10689078	All Organisms → cellular organisms → Archaea	766	Open in IMG/M
3300006954\|Ga0079219_10705522	All Organisms → cellular organisms → Archaea	768	Open in IMG/M
3300007255\|Ga0099791_10021793	All Organisms → cellular organisms → Archaea	2759	Open in IMG/M
3300007258\|Ga0099793_10151353	All Organisms → cellular organisms → Archaea	1098	Open in IMG/M
3300010048\|Ga0126373_11391480	All Organisms → cellular organisms → Archaea	767	Open in IMG/M
3300011270\|Ga0137391_10184702	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1816	Open in IMG/M
3300011270\|Ga0137391_11322354	All Organisms → cellular organisms → Archaea	567	Open in IMG/M
3300012189\|Ga0137388_11364057	All Organisms → cellular organisms → Archaea	648	Open in IMG/M
3300012198\|Ga0137364_11113808	All Organisms → cellular organisms → Archaea	594	Open in IMG/M
3300012200\|Ga0137382_11127722	All Organisms → cellular organisms → Archaea	559	Open in IMG/M
3300012202\|Ga0137363_10833910	All Organisms → cellular organisms → Archaea	782	Open in IMG/M
3300012203\|Ga0137399_10337648	All Organisms → cellular organisms → Archaea	1250	Open in IMG/M
3300012203\|Ga0137399_11781454	All Organisms → cellular organisms → Archaea	504	Open in IMG/M
3300012206\|Ga0137380_11507563	All Organisms → cellular organisms → Archaea	557	Open in IMG/M
3300012208\|Ga0137376_11445805	All Organisms → cellular organisms → Archaea	578	Open in IMG/M
3300012363\|Ga0137390_10661194	All Organisms → cellular organisms → Archaea	1009	Open in IMG/M
3300012918\|Ga0137396_10236573	All Organisms → cellular organisms → Archaea	1346	Open in IMG/M
3300012918\|Ga0137396_10392238	All Organisms → cellular organisms → Archaea	1029	Open in IMG/M
3300012925\|Ga0137419_10494896	All Organisms → cellular organisms → Archaea	970	Open in IMG/M
3300012927\|Ga0137416_10144941	All Organisms → cellular organisms → Archaea	1851	Open in IMG/M
3300017657\|Ga0134074_1004632	All Organisms → cellular organisms → Archaea	4408	Open in IMG/M
3300017934\|Ga0187803_10201111	All Organisms → cellular organisms → Archaea	785	Open in IMG/M
3300018431\|Ga0066655_10010789	All Organisms → cellular organisms → Archaea	3952	Open in IMG/M
3300018468\|Ga0066662_10008100	All Organisms → cellular organisms → Bacteria	5324	Open in IMG/M
3300018468\|Ga0066662_10042615	All Organisms → cellular organisms → Archaea	2820	Open in IMG/M
3300018468\|Ga0066662_11388743	All Organisms → cellular organisms → Archaea	726	Open in IMG/M
3300021171\|Ga0210405_10073438	All Organisms → cellular organisms → Archaea	2694	Open in IMG/M
3300024330\|Ga0137417_1118670	All Organisms → cellular organisms → Archaea	2252	Open in IMG/M
3300024330\|Ga0137417_1184891	All Organisms → cellular organisms → Archaea	1141	Open in IMG/M
3300024330\|Ga0137417_1188425	All Organisms → cellular organisms → Archaea	2135	Open in IMG/M
3300025922\|Ga0207646_10000001	All Organisms → cellular organisms → Archaea	1242027	Open in IMG/M
3300025922\|Ga0207646_10030061	All Organisms → cellular organisms → Archaea	4928	Open in IMG/M
3300025922\|Ga0207646_11225028	All Organisms → cellular organisms → Archaea	657	Open in IMG/M
3300026277\|Ga0209350_1000384	All Organisms → cellular organisms → Archaea	26608	Open in IMG/M
3300026277\|Ga0209350_1005623	All Organisms → cellular organisms → Archaea	4331	Open in IMG/M
3300026296\|Ga0209235_1015350	All Organisms → cellular organisms → Archaea	4172	Open in IMG/M
3300026296\|Ga0209235_1035729	All Organisms → cellular organisms → Archaea	2521	Open in IMG/M
3300026296\|Ga0209235_1035987	All Organisms → cellular organisms → Archaea	2509	Open in IMG/M
3300026296\|Ga0209235_1085822	All Organisms → cellular organisms → Archaea	1392	Open in IMG/M
3300026297\|Ga0209237_1017863	All Organisms → cellular organisms → Archaea	4105	Open in IMG/M
3300026297\|Ga0209237_1046686	All Organisms → cellular organisms → Archaea	2211	Open in IMG/M
3300026297\|Ga0209237_1075841	All Organisms → cellular organisms → Archaea	1561	Open in IMG/M
3300026298\|Ga0209236_1017801	All Organisms → cellular organisms → Bacteria	4036	Open in IMG/M
3300026298\|Ga0209236_1080950	All Organisms → cellular organisms → Archaea	1506	Open in IMG/M
3300026306\|Ga0209468_1023368	All Organisms → cellular organisms → Archaea	2195	Open in IMG/M
3300026310\|Ga0209239_1038790	All Organisms → cellular organisms → Archaea	2207	Open in IMG/M
3300026313\|Ga0209761_1028044	All Organisms → cellular organisms → Archaea	3418	Open in IMG/M
3300026317\|Ga0209154_1000222	All Organisms → cellular organisms → Archaea	40808	Open in IMG/M
3300026318\|Ga0209471_1009754	All Organisms → cellular organisms → Bacteria	5061	Open in IMG/M
3300026328\|Ga0209802_1061791	All Organisms → cellular organisms → Archaea	1803	Open in IMG/M
3300026329\|Ga0209375_1052482	All Organisms → cellular organisms → Archaea	2025	Open in IMG/M
3300026332\|Ga0209803_1006742	All Organisms → cellular organisms → Bacteria	6417	Open in IMG/M
3300026333\|Ga0209158_1001667	All Organisms → cellular organisms → Archaea	14591	Open in IMG/M
3300026333\|Ga0209158_1020026	All Organisms → cellular organisms → Archaea	3037	Open in IMG/M
3300026334\|Ga0209377_1027386	All Organisms → cellular organisms → Archaea	2781	Open in IMG/M
3300026371\|Ga0257179_1002070	All Organisms → cellular organisms → Archaea	1570	Open in IMG/M
3300026376\|Ga0257167_1060557	All Organisms → cellular organisms → Archaea	588	Open in IMG/M
3300026507\|Ga0257165_1014025	All Organisms → cellular organisms → Archaea	1295	Open in IMG/M
3300026532\|Ga0209160_1010752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	6713	Open in IMG/M
3300026532\|Ga0209160_1023115	All Organisms → cellular organisms → Archaea	4099	Open in IMG/M
3300026551\|Ga0209648_10094663	All Organisms → cellular organisms → Archaea	2461	Open in IMG/M
3300026551\|Ga0209648_10392695	All Organisms → cellular organisms → Archaea	918	Open in IMG/M
3300027548\|Ga0209523_1043745	All Organisms → cellular organisms → Archaea	912	Open in IMG/M
3300027643\|Ga0209076_1006392	All Organisms → cellular organisms → Archaea	2861	Open in IMG/M
3300027643\|Ga0209076_1057882	All Organisms → cellular organisms → Archaea	1099	Open in IMG/M
3300027655\|Ga0209388_1123843	All Organisms → cellular organisms → Archaea	737	Open in IMG/M
3300027671\|Ga0209588_1000298	All Organisms → cellular organisms → Archaea	13010	Open in IMG/M
3300027671\|Ga0209588_1013979	All Organisms → cellular organisms → Archaea	2454	Open in IMG/M
3300027846\|Ga0209180_10011667	All Organisms → cellular organisms → Archaea	4545	Open in IMG/M
3300027846\|Ga0209180_10016843	All Organisms → cellular organisms → Archaea	3832	Open in IMG/M
3300027862\|Ga0209701_10345772	All Organisms → cellular organisms → Archaea	843	Open in IMG/M
3300027875\|Ga0209283_10004215	All Organisms → cellular organisms → Bacteria	8186	Open in IMG/M
3300027875\|Ga0209283_10148444	All Organisms → cellular organisms → Archaea	1554	Open in IMG/M
3300031720\|Ga0307469_10002289	All Organisms → cellular organisms → Archaea	7641	Open in IMG/M
3300031720\|Ga0307469_10141996	All Organisms → cellular organisms → Archaea	1780	Open in IMG/M
3300031820\|Ga0307473_10943387	All Organisms → cellular organisms → Archaea	626	Open in IMG/M
3300031962\|Ga0307479_10122557	All Organisms → cellular organisms → Archaea	2537	Open in IMG/M
3300032180\|Ga0307471_100053539	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3350	Open in IMG/M
3300032180\|Ga0307471_100054724	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3322	Open in IMG/M
3300032180\|Ga0307471_100107551	All Organisms → cellular organisms → Archaea	2554	Open in IMG/M
3300032180\|Ga0307471_100380988	All Organisms → cellular organisms → Archaea	1531	Open in IMG/M
3300032180\|Ga0307471_101362741	All Organisms → cellular organisms → Archaea	870	Open in IMG/M
3300032180\|Ga0307471_101777920	All Organisms → cellular organisms → Archaea	768	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.21%
Host-Associated	Host-Associated	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.43%
Aquatic	Environmental → Aquatic	0.79%
Plants	Host-Associated → Plants	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.43%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.13%
Loam	Environmental → Terrestrial → Soil → Loam	6.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	52.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	29.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.36%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100017533	3300002558	Grasslands Soil	MTSPEKPAAKGRSRLDQVDKRLLSDILAILIILLFAIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
JGI25385J37094_100984911	3300002558	Grasslands Soil	SARASEMSSGEKPASKSRSRLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
JGI25383J37093_100013537	3300002560	Grasslands Soil	MGITEKPASKSQSRLDQVDKKLLSDILAILVILLFTIATFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
JGI25383J37093_100277181	3300002560	Grasslands Soil	LDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
JGI25383J37093_100445922	3300002560	Grasslands Soil	MSSPEKPVAKGRSRLDQVDKGLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
JGI25384J37096_100080504	3300002561	Grasslands Soil	MXSPEKPAAKGRSRXDQVDKRLLSDILAILIILLFAIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
JGI25384J37096_102356681	3300002561	Grasslands Soil	MSIPGKPAAKGRSRLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRE*
JGI25382J37095_100364742	3300002562	Grasslands Soil	MSSAEKXASKSRSRLDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
JGI25382J37095_100678323	3300002562	Grasslands Soil	MSSPQKPALKGRSKLDQVDKRLLSDILAILIILLFTVAAFWRYPVAGVLLAGSLALTVFVAADVVLFRRG*
JGI25382J37095_101933571	3300002562	Grasslands Soil	KRIREMTSPVNPAAKVRSRADQVDMRLLSDILAVLVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADIVLFRRG*
JGI25382J37095_102727161	3300002562	Grasslands Soil	MSSTEKPASKDRSKLDQVDKRLLSDILAILVILLFTITAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
JGI25382J43887_100098115	3300002908	Grasslands Soil	MSSPGKPAAKGRSRLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
JGI25382J43887_100118074	3300002908	Grasslands Soil	MSSPEKPAAKGRSRLDQVDKRLLSDILAILIILLFAIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
JGI25382J43887_100725013	3300002908	Grasslands Soil	MSSTEKPAPKSSSRLDQVDKRLLSDILAILVILVFTIGAFWRYPVPGVLLAGSLALTVFVAADVVLF
JGI25382J43887_100913133	3300002908	Grasslands Soil	MTSPVNPAAKVRSRADQVDMRLLSDILAVLVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADIVLFRRG*
JGI25388J43891_10183431	3300002909	Grasslands Soil	GRSRLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
JGI25390J43892_100039404	3300002911	Grasslands Soil	MRSAEKPASKSRSRLDQVDRRLLSDILAILVILVFTIAAFWRYPVPGVLLTGSLALTVFVAADVVLFRRG*
JGI25390J43892_100758941	3300002911	Grasslands Soil	MTSPLIPAAKVRSRPDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADIVLFRRG*
JGI25386J43895_100434733	3300002912	Grasslands Soil	MSSAEKPASKSRSRLDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
Ga0066672_106197542	3300005167	Soil	LDQVDKRFLSDILAILMILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
Ga0066680_100006745	3300005174	Soil	MSSPGKPAAKGRSRLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRE*
Ga0066680_100754092	3300005174	Soil	MSSVEKPAPKGRSKLDQIDRRLLSDIVAILFILLVAIYAFWRYPVPGVLLACSLALTVFVAADVVLFRRG*
Ga0066680_105524022	3300005174	Soil	MSSAERPASKSRSRLDQVDKRLLSDILAIFVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
Ga0066679_109046801	3300005176	Soil	QKSQIGLIYKFSWLSTRISEMSSAERPASKSRSRLDQVDKRFLSDILAILMILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
Ga0066690_104853942	3300005177	Soil	MSSAERPASKSRSRLDQVDKRFLSDILAILMILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
Ga0066685_103309523	3300005180	Soil	SQIGLIYEFSRLFKRIREMTSPVNPAAKVRTRPDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADIVLFRRG*
Ga0066685_109338231	3300005180	Soil	MSIPGKPAAKGRSRLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
Ga0066676_100439833	3300005186	Soil	MSSAEKPASKSRSRLDQVDRRLLSDILAILVILVFTIAAFWRYPVPGVLLTGSLALTVFVAADVVLFRRG*
Ga0070708_1011271821	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSSPEKPSAKGRSRLDQVDKRLLSDILAILIILFFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0066681_103895532	3300005451	Soil	SSAEKPASKSRSRLDQVDRRLLSDILAILVILVFTIAAFWRYPVPGVLLTGSLALTVFVAADVVLFRRG*
Ga0070707_10000036614	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTTAQKPSPKSRAKLDQVDKKLLSDILAILVILLFAIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
Ga0070707_1000853571	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSSAEKPASKPRSKLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVFLAGSLAITVFVAADIVLFRRG*
Ga0070697_1005882252	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSTSEKTPVKGRSRLDQVDKRLLSDILAILVILFFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
Ga0066697_100180474	3300005540	Soil	LDQVDRRLLSDILAILVILVFTIAAFWRYPVPGVLLTGSLALTVFVAADVVLFRRG*
Ga0066701_100989803	3300005552	Soil	LDQVDKRLLSDILAILVILVFTIAAFRRYPVPGVLLAGSLALTVFVAADVVLFRRG*
Ga0066695_102182671	3300005553	Soil	SPEKPVAKGRSRLDQVDKGLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
Ga0066692_100056903	3300005555	Soil	LDQVDKKLLSDILAILVILLFTIATFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
Ga0066707_109292041	3300005556	Soil	MSSAERPASKSRSRLDQVDKRLLSDILAILIILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
Ga0066704_109204902	3300005557	Soil	LDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
Ga0079222_101251543	3300006755	Agricultural Soil	LTTAQKPNPKGRTRLDQIDKKLLSDILAILVILFFTIAAFWRYPVPGVLLAGSLAITVFVAA
Ga0066653_100666242	3300006791	Soil	LDQVDRRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
Ga0066659_109438502	3300006797	Soil	MTSPVNPAAKVRTRPDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
Ga0079221_109073261	3300006804	Agricultural Soil	MTAAQKPNPKGRAKLDQVDKKLLTDILVIFVILLFTIAAFWRYPVPGVLLAGSLAITV
Ga0075426_106890782	3300006903	Populus Rhizosphere	MTAAQKPSPKSRAKLDQVDKKLLSDILAILVILFFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
Ga0079219_107055221	3300006954	Agricultural Soil	EMTAAQKPNPKARAKLDQVDKKLLSDILAILVVLFFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
Ga0099791_100217934	3300007255	Vadose Zone Soil	MSSAEKSGSKIRSKLDQPDKRLLSDILAVLVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
Ga0099793_101513532	3300007258	Vadose Zone Soil	MISAEKPASKPRSKLDQVDKRLLSDILAILVILLVTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
Ga0126373_113914802	3300010048	Tropical Forest Soil	MKMDGITKKFLGDLASILVILLITSAAFWRYPVPGVLLAGGLALTIFVAADVVLFRKG*
Ga0137391_101847023	3300011270	Vadose Zone Soil	MSGNEKPVAKDRSRLDQVDKRLLSDILAILVILGFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
Ga0137391_113223541	3300011270	Vadose Zone Soil	MSSIEKPAPKGRSKLDQIDRRLLSDIVAILFILLVTIYAFWRYPVPGVLLACSLALTVFVAADVVLFRR
Ga0137388_113640571	3300012189	Vadose Zone Soil	MSSAEKSGSKSRSKLDQADKRLLSDILAVLVILLFTTAAFWRYPVPGVLLAGSLAITVFVAADIVLFRRG*
Ga0137364_111138082	3300012198	Vadose Zone Soil	LDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFV
Ga0137382_111277221	3300012200	Vadose Zone Soil	LDQVDRRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVF
Ga0137363_108339101	3300012202	Vadose Zone Soil	MISAEKPASKPGSKLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADV
Ga0137399_103376482	3300012203	Vadose Zone Soil	LDQVDKRLLSDILAILIILLFTVATFWRYPVAGVLLAGSLALTVFVAADVVLFRRG*
Ga0137399_117814541	3300012203	Vadose Zone Soil	MTSPVNPAAKVRTRPDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADIVLFRRG*
Ga0137380_115075631	3300012206	Vadose Zone Soil	MSSAEKLASKSWSRLDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGGLALTVFVAADVVLFRRG*
Ga0137376_114458052	3300012208	Vadose Zone Soil	MSSAEKLASKSRSRLDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVL
Ga0137361_101432871	3300012362	Vadose Zone Soil	MRLLSDILAVLVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADIVLFRRG*
Ga0137390_106611942	3300012363	Vadose Zone Soil	MSSVEKPAPKGRSKLDQIDRRLLSDIVAILFILLVTIYAFWRYPVPGVLLACSLALTVFVAADVVLFRR
Ga0137396_102365731	3300012918	Vadose Zone Soil	MSSAEKPASKPRSKLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVL
Ga0137396_103922382	3300012918	Vadose Zone Soil	MISAEKPASKPRSKLDQVDKRLLSDIVAILIILIFTIAAFWRYPVPGVLLAGSLAITVFV
Ga0137419_104948962	3300012925	Vadose Zone Soil	MSSNDKPASKGRSRLDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG*
Ga0137416_101449413	3300012927	Vadose Zone Soil	MSSAEKLASKSRSRLDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG*
Ga0134074_10046324	3300017657	Grasslands Soil	VSSAEKPASKSRSRLDQVDRRLLSDILAILVILVFTIAAFWRYPVPGVLLTGSLALTVFVAADVVLFRRG
Ga0187803_102011112	3300017934	Freshwater Sediment	MSGVDKPVSKSRSKLDQVDRKLLTDVLGILFILLFTILAFWRYQVSGVLLACSLALTVFVAADVVLFRRG
Ga0066655_100107893	3300018431	Grasslands Soil	LAQVDRRLLSDILAILVILVFTIAAFWRYPVPGVLLTGSLALTVFVAADVVLFRRG
Ga0066662_100081006	3300018468	Grasslands Soil	LDQVDKKLLSDILAILVILLFTIATFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0066662_100426153	3300018468	Grasslands Soil	MSSPGKPAAKGRSRLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRE
Ga0066662_113887431	3300018468	Grasslands Soil	SWLSARVSEMSSAEKPASKSRSRLDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0210405_100734385	3300021171	Soil	MSGAEKPASKSRSRLDQADKRLLSDILAILVILLFTVAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0137417_11186704	3300024330	Vadose Zone Soil	MISAEKPASKPGSKLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0137417_11848912	3300024330	Vadose Zone Soil	MISAEKPASKPRSKLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0137417_11884253	3300024330	Vadose Zone Soil	LDQVDKRLLSDILAILVILVFTIATFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0207646_10000001661	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTTAQKPSPKSRAKLDQVDKKLLSDILAILVILLFAIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0207646_100300615	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNSPEKPAAKVRSRLDQVDKRLLSDILAILIILFFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0207646_112250281	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSSAEKPASKPRSKLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0209350_10003849	3300026277	Grasslands Soil	MSSPEKPVAKGRSRLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0209350_10056235	3300026277	Grasslands Soil	LDQVDRRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0209235_10153503	3300026296	Grasslands Soil	MTSPVNPAAKVRSRADQVDMRLLSDILAVLVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADIVLFRRG
Ga0209235_10357292	3300026296	Grasslands Soil	MSSPEKPVAKGRSRLDQVDKGLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0209235_10359872	3300026296	Grasslands Soil	LDQVDKRLLSDILAILIILLFAIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0209235_10858223	3300026296	Grasslands Soil	SKSRSRLDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0209237_10178634	3300026297	Grasslands Soil	MSSPEKPAAKGRSRLDQVDKRLLSDILAILIILLFAIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0209237_10466863	3300026297	Grasslands Soil	MSIPGKPAAKGRSRLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0209237_10758412	3300026297	Grasslands Soil	LDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0209236_10178014	3300026298	Grasslands Soil	MTSPVNPAAKVRSRPDQVDMRLLSDILAVLVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADIVLFRRG
Ga0209236_10809502	3300026298	Grasslands Soil	LDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0209468_10233684	3300026306	Soil	LDQVDRRLLSDILAILVILVFTIAAFWRYPVPGVLLTGSLALTVFVAADVVLFRRG
Ga0209239_10387904	3300026310	Grasslands Soil	MTSPLIPAAKVRSRPDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADIVLFRRG
Ga0209761_10280442	3300026313	Grasslands Soil	MSSAEKLASKSRSRLDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0209154_100022231	3300026317	Soil	MSSAERPASKSRSRLDQVDKRFLSDILAILMILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0209471_10097545	3300026318	Soil	LDQVDKRFLSDILAILMILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0209802_10617912	3300026328	Soil	MSSVEKPAPKGRSKLDQIDRRLLSDIVAILFILLVAIYAFWRYPVPGVLLACSLALTVFVAADVVLFRRG
Ga0209375_10524823	3300026329	Soil	MSSAEKPASKSRSRLDQVDRRLLSDILAILVILVFTIAAFWRYPVPGVLLTGSLALTVFVAADVVLFRRG
Ga0209803_10067427	3300026332	Soil	LDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGGLALTVFVAADVVLFRRG
Ga0209158_100166711	3300026333	Soil	LDQVDKRLLSDILAILVILVFTIAAFRRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0209158_10200262	3300026333	Soil	LDQVDKRLLSDILAIFVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0209377_10273862	3300026334	Soil	MSSAEKPASKSRSRLDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0257179_10020702	3300026371	Soil	MSSGEKSGSKSLSKLDQADKRLLSDILAVLVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLSRRG
Ga0257167_10605571	3300026376	Soil	MSSAEKSGSKSRSKLDQADKRLLSDILAVLVILLFTMAAFWRYPVPGVLLAGSLAITVFVAADVVLSRRG
Ga0257165_10140253	3300026507	Soil	MSSAEKSGSKSRSKLDQADKRLLSDILAVLVILLFTTAAFWRYPVPGVLLAGSLAITVFVAADVVL
Ga0209160_10107526	3300026532	Soil	LDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLTGSLALTVFVAADVVLFRRG
Ga0209160_10231152	3300026532	Soil	MGITEKPASKSQSRLDQVDKKLLSDILAILVILLFTIATFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0209648_100946633	3300026551	Grasslands Soil	MSSVEKPAPKGRSKLDQIDRRLLSDIVAILFILLVTIYAFWRYPVPGVLLACSLALTVFVAADVVLFRRG
Ga0209648_103926951	3300026551	Grasslands Soil	MSGTEKPVAKDRSRLDQFDKRLLSDILAILVILGFTIAAFWRYPVPGVLLAGSLAIAVFVAADVVLFRRG
Ga0209523_10437452	3300027548	Forest Soil	MTAAQKPNPKGRAKLDQVDKKLLSDILAIFVILLLTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0209076_10063924	3300027643	Vadose Zone Soil	MTSPVNPAAKVRTRPDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLAVTVFVAADIVLFRRG
Ga0209076_10578822	3300027643	Vadose Zone Soil	MISAEKPASKPRSKLDQVDKRLLSDILAILVILLVTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0209388_11238431	3300027655	Vadose Zone Soil	LSMRISEMSSGEKPASKSRSKLDQLDKKLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0209588_10002988	3300027671	Vadose Zone Soil	LTLSSTRIQEMSSAEKPASKPRSKLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0209588_10139794	3300027671	Vadose Zone Soil	LDQVDKRLLSDILAILVILVFTIAAFWRYPVPGVLLAGSLAITVFVA
Ga0209180_100116675	3300027846	Vadose Zone Soil	MSGTEKPVAKDRSRLDQVDKRLLSDILAILVILGFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0209180_100168433	3300027846	Vadose Zone Soil	MSSPEKPPSKGRSRLDQVDKRLLSDILAILIILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0209701_103457721	3300027862	Vadose Zone Soil	KPAPKGRSKLDQIDRRLLSDIVAILFILLVTIYAFWRYPVPGVLLACSLALTVFVAADVVLFRRG
Ga0209283_100042157	3300027875	Vadose Zone Soil	MSSAEKPASKDRSKLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0209283_101484442	3300027875	Vadose Zone Soil	MSSAEKPASKPGSKLDQVDKRLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0307469_100022893	3300031720	Hardwood Forest Soil	MSSLEKPVAKGRSRLDQVDKRLLSDILAILVILFFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0307469_101419963	3300031720	Hardwood Forest Soil	LSSPEKPVAKARSRLDQVDKRLLSDILAILIILFFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0307473_109433872	3300031820	Hardwood Forest Soil	MSSAEKPASKGRSRLDQVDRRLLSDILAVLIILLFSIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0307479_101225573	3300031962	Hardwood Forest Soil	LTTAQKPNPKGRTKLDQIDKKLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0307471_1000535393	3300032180	Hardwood Forest Soil	MSSAEKRASKGRARLDQVDKRLLSDILAILVILLFTVAAFWRYPVAGVLLAGSLALTVFVAADVVLFRRG
Ga0307471_1000547241	3300032180	Hardwood Forest Soil	LTTAQKPNPKGRTKLDQIDKKLLSDILAILVILLFTVAAFWRYPVPGVLLAGSLAITVFVAADVVLFR
Ga0307471_1001075512	3300032180	Hardwood Forest Soil	MSSPEKPVAKARSRLDQVDKRLLSDILAILIILFFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0307471_1003809883	3300032180	Hardwood Forest Soil	MSSAEKPASKGRSRLDQVDRRLLSDILAVLIILLFTIAAFWRYPVPGVLLAGSLALTVFVAADVVLFRRG
Ga0307471_1013627412	3300032180	Hardwood Forest Soil	MTAAQKPNPKGRARLDQVDKKLLSDILAILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG
Ga0307471_1017779201	3300032180	Hardwood Forest Soil	MSSAEKPASKPRSKLDQVDKRLLSDILGILVILLFTIAAFWRYPVPGVLLAGSLAITVFVAADVVLFRRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065660

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences