Metagenome / Metatranscriptome Family F065697

Basic Information
Family ID	F065697
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	55 residues
Representative Sequence	VRRAVSVAERRDWDRLPISIPFFVRGRKGGGEEFLEFATALNLSAGGVLLAT
Number of Associated Samples	100
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.98 %
% of genes near scaffold ends (potentially truncated)	77.17 %
% of genes from short scaffolds (< 2000 bps)	70.08 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Unclassified (51.969 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.961 % of family members)
Environment Ontology (ENVO)	Unclassified (22.835 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.417 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.75% β-sheet: 28.75% Coil/Unstructured: 67.50%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00512	HisKA	29.13
PF02518	HATPase_c	12.60
PF07238	PilZ	3.15
PF00072	Response_reg	2.36
PF00158	Sigma54_activat	2.36
PF02954	HTH_8	1.57
PF02781	G6PD_C	0.79
PF07589	PEP-CTERM	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
All Organisms	root	All Organisms	48.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
cellular organisms	root	All Organisms → cellular organisms	48.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.43 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.15 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.36 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.15 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.36 %
Candidatus Peregrinibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.15 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.36 %
unclassified Candidatus Peregrinibacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → unclassified Candidatus Peregrinibacteria	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.15 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.79 %
Candidatus Peregrinibacteria bacterium Greene0416_19	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → unclassified Candidatus Peregrinibacteria → Candidatus Peregrinibacteria bacterium Greene0416_19	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10048416	All Organisms → cellular organisms → Bacteria → Acidobacteria	1144	Open in IMG/M
3300003218\|JGI26339J46600_10090284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300003219\|JGI26341J46601_10055526	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300003368\|JGI26340J50214_10124779	Not Available	651	Open in IMG/M
3300004152\|Ga0062386_100788212	Not Available	783	Open in IMG/M
3300004152\|Ga0062386_101132130	Not Available	650	Open in IMG/M
3300005436\|Ga0070713_102062722	Not Available	553	Open in IMG/M
3300005439\|Ga0070711_101504712	Not Available	587	Open in IMG/M
3300005610\|Ga0070763_10124534	All Organisms → cellular organisms → Bacteria → Acidobacteria	1324	Open in IMG/M
3300005764\|Ga0066903_105178009	Not Available	690	Open in IMG/M
3300005995\|Ga0066790_10234770	All Organisms → cellular organisms → Bacteria → Proteobacteria	782	Open in IMG/M
3300006052\|Ga0075029_100653350	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	706	Open in IMG/M
3300006055\|Ga0097691_1069113	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Peregrinibacteria → unclassified Candidatus Peregrinibacteria → Candidatus Peregrinibacteria bacterium Greene0416_19	1134	Open in IMG/M
3300006055\|Ga0097691_1172209	Not Available	566	Open in IMG/M
3300006642\|Ga0075521_10667137	Not Available	513	Open in IMG/M
3300006806\|Ga0079220_10792567	Not Available	715	Open in IMG/M
3300010341\|Ga0074045_10773152	Not Available	608	Open in IMG/M
3300010359\|Ga0126376_11667581	Not Available	672	Open in IMG/M
3300010376\|Ga0126381_101583455	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300010376\|Ga0126381_104788583	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300010937\|Ga0137776_1249547	All Organisms → cellular organisms → Bacteria → Acidobacteria	1040	Open in IMG/M
3300014169\|Ga0181531_10011165	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5158	Open in IMG/M
3300015374\|Ga0132255_106358348	Not Available	500	Open in IMG/M
3300016294\|Ga0182041_11172420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300016319\|Ga0182033_10459652	All Organisms → cellular organisms → Bacteria → Acidobacteria	1087	Open in IMG/M
3300016319\|Ga0182033_11099949	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300016341\|Ga0182035_12093392	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300016341\|Ga0182035_12168154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300016387\|Ga0182040_10390574	All Organisms → cellular organisms → Bacteria → Acidobacteria	1089	Open in IMG/M
3300016387\|Ga0182040_11265988	Not Available	622	Open in IMG/M
3300016702\|Ga0181511_1281822	Not Available	603	Open in IMG/M
3300016702\|Ga0181511_1290910	All Organisms → cellular organisms → Bacteria	2739	Open in IMG/M
3300017938\|Ga0187854_10094171	All Organisms → cellular organisms → Bacteria → Acidobacteria	1413	Open in IMG/M
3300017940\|Ga0187853_10471501	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300017955\|Ga0187817_10120661	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300017975\|Ga0187782_10251307	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300017975\|Ga0187782_11244485	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300018009\|Ga0187884_10365259	Not Available	581	Open in IMG/M
3300018021\|Ga0187882_1073224	All Organisms → cellular organisms → Bacteria → Acidobacteria	1531	Open in IMG/M
3300018043\|Ga0187887_10329362	Not Available	901	Open in IMG/M
3300018062\|Ga0187784_10700910	Not Available	810	Open in IMG/M
3300018090\|Ga0187770_10072179	All Organisms → cellular organisms → Bacteria	2531	Open in IMG/M
3300018090\|Ga0187770_11205588	Not Available	612	Open in IMG/M
3300020580\|Ga0210403_11058219	Not Available	632	Open in IMG/M
3300021168\|Ga0210406_10642478	Not Available	824	Open in IMG/M
3300021180\|Ga0210396_10246348	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300021181\|Ga0210388_11063198	Not Available	692	Open in IMG/M
3300021478\|Ga0210402_11340521	Not Available	643	Open in IMG/M
3300021560\|Ga0126371_10045136	All Organisms → cellular organisms → Bacteria → Acidobacteria	4197	Open in IMG/M
3300022713\|Ga0242677_1016867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	865	Open in IMG/M
3300025427\|Ga0208077_1058531	Not Available	538	Open in IMG/M
3300025612\|Ga0208691_1044263	All Organisms → cellular organisms → Bacteria → Acidobacteria	1014	Open in IMG/M
3300025878\|Ga0209584_10403800	Not Available	527	Open in IMG/M
3300026294\|Ga0209839_10018341	All Organisms → cellular organisms → Bacteria	2779	Open in IMG/M
3300026868\|Ga0207818_1017737	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300026887\|Ga0207805_1027763	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300026921\|Ga0207860_1013280	All Organisms → cellular organisms → Bacteria → Acidobacteria	1072	Open in IMG/M
3300026941\|Ga0207741_1014270	All Organisms → cellular organisms → Bacteria → Acidobacteria	898	Open in IMG/M
3300027035\|Ga0207776_1006920	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300027824\|Ga0209040_10146080	All Organisms → cellular organisms → Bacteria → Acidobacteria	1283	Open in IMG/M
3300028740\|Ga0302294_10023676	All Organisms → cellular organisms → Bacteria → Acidobacteria	1427	Open in IMG/M
3300028748\|Ga0302156_10320394	Not Available	691	Open in IMG/M
3300028788\|Ga0302189_10116728	All Organisms → cellular organisms → Bacteria → Acidobacteria	1187	Open in IMG/M
3300029910\|Ga0311369_10094029	All Organisms → cellular organisms → Bacteria	3047	Open in IMG/M
3300029951\|Ga0311371_12294788	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300029981\|Ga0302293_10228271	Not Available	574	Open in IMG/M
3300029990\|Ga0311336_10029506	All Organisms → cellular organisms → Bacteria	4215	Open in IMG/M
3300030003\|Ga0302172_10136192	Not Available	759	Open in IMG/M
3300030114\|Ga0311333_11366033	Not Available	608	Open in IMG/M
3300030838\|Ga0311335_10752234	Not Available	688	Open in IMG/M
3300031231\|Ga0170824_127409164	Not Available	683	Open in IMG/M
3300031474\|Ga0170818_105740864	Not Available	877	Open in IMG/M
3300031545\|Ga0318541_10367270	Not Available	804	Open in IMG/M
3300031572\|Ga0318515_10594928	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300031573\|Ga0310915_10494343	All Organisms → cellular organisms → Bacteria → Acidobacteria	869	Open in IMG/M
3300031719\|Ga0306917_10410959	All Organisms → cellular organisms → Bacteria → Acidobacteria	1057	Open in IMG/M
3300031719\|Ga0306917_11446840	Not Available	529	Open in IMG/M
3300031890\|Ga0306925_11014534	All Organisms → cellular organisms → Bacteria → Acidobacteria	845	Open in IMG/M
3300031912\|Ga0306921_11054131	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300031912\|Ga0306921_12340409	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300031947\|Ga0310909_10925229	Not Available	715	Open in IMG/M
3300031954\|Ga0306926_11278449	All Organisms → cellular organisms → Bacteria → Acidobacteria	858	Open in IMG/M
3300032001\|Ga0306922_10224565	All Organisms → cellular organisms → Bacteria	2017	Open in IMG/M
3300032001\|Ga0306922_11200425	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300032001\|Ga0306922_11868089	Not Available	589	Open in IMG/M
3300032059\|Ga0318533_10856822	Not Available	667	Open in IMG/M
3300032059\|Ga0318533_11031997	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300032782\|Ga0335082_10685222	Not Available	886	Open in IMG/M
3300032783\|Ga0335079_10306741	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300032828\|Ga0335080_11215362	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300032829\|Ga0335070_10259295	All Organisms → cellular organisms → Bacteria	1700	Open in IMG/M
3300032829\|Ga0335070_11144531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300032893\|Ga0335069_10570925	All Organisms → cellular organisms → Bacteria → Acidobacteria	1302	Open in IMG/M
3300032893\|Ga0335069_11366477	All Organisms → cellular organisms → Bacteria → Acidobacteria	768	Open in IMG/M
3300032896\|Ga0335075_11729255	Not Available	507	Open in IMG/M
3300032898\|Ga0335072_10152909	All Organisms → cellular organisms → Bacteria	2826	Open in IMG/M
3300033134\|Ga0335073_10068493	All Organisms → cellular organisms → Bacteria	4676	Open in IMG/M
3300033134\|Ga0335073_10564109	All Organisms → cellular organisms → Bacteria → Acidobacteria	1282	Open in IMG/M
3300033134\|Ga0335073_11160881	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.43%
Host-Associated	Host-Associated	1.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.95%
Aquatic	Environmental → Aquatic	20.47%
Plants	Host-Associated → Plants	1.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.50%
Freshwater	Environmental → Aquatic → Freshwater	18.11%
Peat	Environmental → Terrestrial → Peat	9.45%
Sediment	Environmental → Aquatic → Sediment	1.57%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	22.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.11%
Loam	Environmental → Terrestrial → Soil → Loam	9.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.57%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	21.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.57%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.79%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	13.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.87%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.30%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	5.51%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.51%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.15%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.36%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.36%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.36%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.57%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.79%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.79%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026868	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 32 (SPAdes)	Environmental	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300026887	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49 (SPAdes)	Environmental	Open in IMG/M
3300026921	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)	Environmental	Open in IMG/M
3300026941	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39 (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027043	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 11 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300028674	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_1	Environmental	Open in IMG/M
3300028740	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029981	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_2	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100484161	3300003218	Bog Forest Soil	VRRTASVAERRGWERLPISVPFFVRGAKPGGEEFLEFATALNLSAGGLLLATRRYLDPGTNISLE
JGI26339J46600_100902842	3300003218	Bog Forest Soil	VRRRDSVAERRDWDRLPISIPFFVRGRKASGEEFLEFATALNLSAGGVLLAARRYLDPGSQISLEVPVALVNKAQ
JGI26341J46601_100555262	3300003219	Bog Forest Soil	VRRPISVAERRDWDRLPISIPFFVRGRKLTGEDFLEFATALNLSAGGVLLATKRYLDPGTQISLEVPIALV
JGI26340J50214_101247791	3300003368	Bog Forest Soil	VRRPVAVAERRDWDRLPISIPFFVRGRKFTGEEFLEFATALNLSAGGVLLATRRYLDPGTQISLEVP
Ga0062386_1007882122	3300004152	Bog Forest Soil	VRRTVPVAERRGWERLPISIPFFVRGSTAAGEEFLEFATALNLSAGGVL
Ga0062386_1011321301	3300004152	Bog Forest Soil	VRRPVSATERRDWDRLPISIPFFVRGTKLTGEEFLEFATALNLSAGGV
Ga0062386_1016278221	3300004152	Bog Forest Soil	VRRPISVAERRDWDRLPISIPFFVRGRKLTGEDFLEFATALN
Ga0070713_1020627221	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VRRTVSVAERRGWERLPISIPFFVRGKSANGEEFLEFATALNLSAGGVLLAA
Ga0070711_1015047121	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDVRYPYVTQEIAVRRTVSAAERRGWERLPISIPFFVRGSTASGEEFLEFATALNLSAGGVLLATRRYLDPGTSISLEVPVALVNKAQ
Ga0070763_101245341	3300005610	Soil	VRRTVSVAERRGWERLPISIPFFVRGTSASGEEFLEFATALNLSAGGVLLATRRYMEPGTQL
Ga0066903_1051780092	3300005764	Tropical Forest Soil	VSRSALPSERRGWERLPISIPFFVRGSKATGEDFLEFATALNLSAGGLLLATRRYLDPGTRVSL
Ga0066790_102347702	3300005995	Soil	MEWRAKVRRPVSVTERRDWDRLPISIPFFVRGKKLTGEEFLEFATALNLSAGGVLLATK
Ga0075029_1006255821	3300006052	Watersheds	VRHEEHSTDRREWDRLPIAIPFFVRGRKGDREEFLEFATALNLSA
Ga0075029_1006533502	3300006052	Watersheds	MERLDPLSGTERRKWYRMPITIPFFVRGRKSTGEEFLEFATALNIS
Ga0097691_10691132	3300006055	Arctic Peat Soil	VSSAERRDWDRLPITIPFFVRSRSYSGEEFLQFAAALNLSAGGALLATKKYLEPNTPITLEVPTA
Ga0097691_11722092	3300006055	Arctic Peat Soil	MEIPPDVPTPASGAERRDWDRLPISIPFFVRGRKSNGEGIVEFATALDVSA
Ga0075521_106671371	3300006642	Arctic Peat Soil	VLPRIASVAERRDWDRLPIAIPFFVRGKKATGEEFLEFATALNLSAGGVLLATRRFLEPGAELSLEV
Ga0079220_107925671	3300006806	Agricultural Soil	VRRTVSVAERRGWERLPISIPFFVRGKSANGEEFLEFATALNLSAGGVLLAARRYMDPGSEITLEIPVALANKAQL
Ga0116223_105671502	3300009839	Peatlands Soil	VRRTASVAERRDWDRLPISIPFFVRGSNADGEEFLEFA
Ga0074046_104401312	3300010339	Bog Forest Soil	VRRTASVAERRGWDRLPISIPFFVRGAKASGEEFLEF
Ga0074046_106026971	3300010339	Bog Forest Soil	VRRRDSVAERRDWDRLPISIPFFVRGRKASGEEFL
Ga0074045_107731521	3300010341	Bog Forest Soil	VRRPASVAERREWDRLPISIPFFVRGRKTTGEEFLEFATALNLSAGGV
Ga0126376_116675812	3300010359	Tropical Forest Soil	LVANVLRIQKGRIQVRRAARLADRREWDRLPISIPFFVRGKKDSGEEFLEFATALNLSAGGVLLAARRFLEPGTQITLEVPVALVNKAQLP
Ga0126381_1015834552	3300010376	Tropical Forest Soil	VSRIVSVAERRDWDRLPISIPFFVRGRKGGGEEFLEFATALNLSAGGILL
Ga0126381_1047885831	3300010376	Tropical Forest Soil	VRRTASVAERRDWDRLPISIPFFVRGRKGGGEEFLEFATALNLSAGGVLLATRRFLEPGT
Ga0137776_12495472	3300010937	Sediment	MNDKNERRKSERLPISIPFFMRSAKAGGNEFLDFATALNLSAGGVLLASRRCLDPG
Ga0181531_100111651	3300014169	Bog	LRRSVSVAERRGWDRLPISIPFFVRGKNSDGEEFLEFATALNLSAGGVLLATRRYLDPGTEISLEIP
Ga0181526_103190161	3300014200	Bog	VRRREVPTDRREWDRLPLSIPFFVRGRKGTGEEFLE
Ga0181522_103054572	3300014657	Bog	VRRSVSVAERRGWDRLPISIPFFVRGKNSDGEEFL
Ga0132255_1063583481	3300015374	Arabidopsis Rhizosphere	VRQTVSVAERRGWERLPISIPFFVRGSTSSGEDFLEFATALNLSAG
Ga0182041_111724201	3300016294	Soil	VRRPASDRREWDRLPISIPFFVRGKKATGEEFLEFATALNLSAGGVLLATRRYLEPG
Ga0182033_104596521	3300016319	Soil	VRHTVSVEERRDWDRLPISIPFFVRGRKAGGEEFLEFATALNLSAGGLLLATRRYLEP
Ga0182033_110999491	3300016319	Soil	VRRSERLADRREWDRLPISIPFFVRGKKDSGEEFLEFATALNLSAGGVLLATRRFLDPGTQITL
Ga0182035_120933921	3300016341	Soil	VRRSVSVAERRDWDRLPISIPFFVRGKKSGGEEFLEFATALNLSAGGVLLAARRYLEPGTQLSLEVPVALVN
Ga0182035_121681541	3300016341	Soil	VRRPASDRREWDRLPISIPFFVRGKKATGEEFLEFATALNLSAGGVLLATRRYLEPGTQISLEIP
Ga0182034_101733993	3300016371	Soil	VRRSVSVAERRDWDRLPISIPFFVRGKKSGGEEFLEFAT
Ga0182040_103905741	3300016387	Soil	VRHKEPNADRREWDRLPISIPFFVRGKKEAGEEFLEFATALNLS
Ga0182040_112659881	3300016387	Soil	VSRSILPSERRGWDRLPISIPFFVRGSKSTGEEFLEFATALNLSAGGLLLATR
Ga0182040_118110161	3300016387	Soil	VRRAVSVAERRDWDRLPISIPFFVRGRKGGAEEFLEFA
Ga0182040_119535011	3300016387	Soil	VRRSVSVAERRDWDRLPISIPFFVRGKKSGGEEFLEFA
Ga0181511_12818221	3300016702	Peatland	LRRTVSVAERRGWDRLPISIPFFVRGKNSNGEEFLEFATALNLSGG
Ga0181511_12909101	3300016702	Peatland	VRRTVSVAERRGWDRLPISIPFFVRGKNSEGEEFLEFATALNLSAGGVLLATR
Ga0187854_100941712	3300017938	Peatland	LRRSVSVAERRGWDRLPISIPFFVRGKNSNCEEFLEFATALNLSAGGVLLATRRYLDPGTEITLEIPV
Ga0187853_104715011	3300017940	Peatland	VRRTASVAERRDWDRLPISIPFFVRGSNADGEEFLEFATALNLSAGGLLLAARRYLE
Ga0187817_101206611	3300017955	Freshwater Sediment	VRRTVSVAERRGWERLPISIPFFVRGSTASGEEFLEFATALNLSASGVLLATRR
Ga0187782_102513071	3300017975	Tropical Peatland	MAERRGWDRLPISIPFFIRGTKSNGEAFLEFATALNLSAGGLLLASRRYLDPGT
Ga0187782_112444851	3300017975	Tropical Peatland	MTERRSWDRLPISIPFFVRGTKNNGEEFLEFATALNLSAGGLLL
Ga0187884_103652592	3300018009	Peatland	VRRSVSVAERRGWERLPISIPFFVRGSTASGEEFLEFATALNLSAGGVLLATRRYLDAG
Ga0187882_10732241	3300018021	Peatland	LRRSVSVAERRGWDRLPISIPFFVRGKNSNGEEFLEFATALNLSAGGVLLATRRYLDPGTEITL
Ga0187881_102453782	3300018024	Peatland	VRRTASVAERRDWDRLPISIPFFVRGSNADGEEFLE
Ga0187887_103293622	3300018043	Peatland	VRRSVSVAERRGWERLPISIPFFVRGSTASGEEFLEFATALNLSAGGVLLATRRYLDAGTKISLEVPVALVNKAQLPRSVARLQA
Ga0187784_107009102	3300018062	Tropical Peatland	LRRAASVAERRGWDRLPISIPFFVRGTKVGGEEFLEFATALNLSAGGLLLATRRYLDP
Ga0187769_104337732	3300018086	Tropical Peatland	VRRTASVAERRGWDRLPIAIPFFVRGKAGGGEFLEFATALN
Ga0187771_113505781	3300018088	Tropical Peatland	VRETASVAERRGWDRLPISIPFFVRGTKAKGEEFLEFATALNLC
Ga0187770_100721793	3300018090	Tropical Peatland	VRRTVSVAERRGWERLPISIPFFVRGSTASGEEFLEFATALNLSAGGVLLATRRYLDPG
Ga0187770_112055881	3300018090	Tropical Peatland	VRRTASVAERRGWDRLPISIPFFVRGTKASGEEFLEFATALNLCAGGLLLAARRYLDPGTQITLEIP
Ga0210403_110582191	3300020580	Soil	VRRPISVTERRAWARLPISIPFFVRGKKVTGEDFLEFATALNLSAGGVLL
Ga0210406_106424782	3300021168	Soil	VRRSVSAADRREWERLPISIPFFVRGKKANGEEFLEFATALNLSAGGVLLAARRYL
Ga0210396_102463481	3300021180	Soil	VRRTVSVAERRGWERLPISIPFFVRGTSASGEEFLEFATALNLSAGGVLLATRRYIDPGTQIS
Ga0210388_110631982	3300021181	Soil	LRRTVSVAERRGWERLPISVPFFVRGTSASGEEFLEFATGLNLS
Ga0210402_113405211	3300021478	Soil	VRRPVSVAERRDWDRLPISIPFFVRGRKLTGEDFLEFATALNLSAGGVLLATKRYLD
Ga0126371_100451364	3300021560	Tropical Forest Soil	VRRAARLADRRVWDRLPISIPFFVRGKKDSGEEFLEFATALNLSAG
Ga0242677_10168672	3300022713	Soil	MSTPDQGLRPLSLAERRNWYRLPISIPFFMRGKKSTGEEFLELATALNVSG
Ga0208077_10585311	3300025427	Arctic Peat Soil	MEPPNKRLCPESLAERREWYRLPISIPFFMRGKKPAGEEVLEFTTALNISAGGA
Ga0208355_10624231	3300025581	Arctic Peat Soil	VRRTASVAERRGWERLPISIPFFVRGSKADGEDFLEFATAL
Ga0208355_10765481	3300025581	Arctic Peat Soil	VRRTASVAERRGWERLPISIPFFVRGSKANGEEFL
Ga0208691_10442631	3300025612	Peatland	LRRSVSVAERRGWDRLPISIPFFVRGKNSNGEEFLEFATALNLSAGGVLLATRRYLD
Ga0209584_104038001	3300025878	Arctic Peat Soil	MKRPPNVSTPALGAERREWDRLPIYIPFFVRGKKPTGEEFLECATALNISAG
Ga0209839_100183411	3300026294	Soil	MEWRAKVRRPVSVTERRDWDRLPISIPFFVRGKKLTGEEFLEFATALNLSAG
Ga0207818_10177371	3300026868	Tropical Forest Soil	VRRRESVAERRDWDRLPISIPFFVRGRKGSGEEFLEFATALNLSAGGVLLAARRYLEPGSQI
Ga0207821_10251281	3300026869	Tropical Forest Soil	VRRRESAAERREWDRLPIAIPFFVRGRKGTGEEFLE
Ga0207805_10277631	3300026887	Tropical Forest Soil	VRRRESVAERRDWDRLPISIPFFVRGRKGSGEEFLEFATALNLSAGGVLLAARRYL
Ga0207860_10132801	3300026921	Tropical Forest Soil	VRRRESAAERREWDRLPIAIPFFVRGRKGTGEEFLEFATALNLSAGGVL
Ga0207741_10142702	3300026941	Tropical Forest Soil	VRRRESAAERREWDRLPIAIPFFVRGRKGTGEEFLEFATALNLSAGGVLLA
Ga0207776_10069203	3300027035	Tropical Forest Soil	VRRRESVAERRDWDRLPISIPFFVRGRKGSGEEFLEFATALNLSAGGVLLAARRYLEPGSQISLEVPVALVNK
Ga0207800_10198291	3300027043	Tropical Forest Soil	VRRRESVAERRDWDRLPISIPFFVRGRKGSGEEFLEFATALNL
Ga0209448_101888691	3300027783	Bog Forest Soil	VRRTASVAERRGWDRLPISIPFFVRGTKANGEEFLEFATALN
Ga0209040_101460801	3300027824	Bog Forest Soil	VRRTASVAERRGWDRLPISIPFFVRGTKASGEEFLEFATALNLSAGG
Ga0209039_102917632	3300027825	Bog Forest Soil	VRRTVPVAERRGWERLPISIPFFVRGSTAAGEEFLE
Ga0302161_102289002	3300028674	Fen	VRRPVSVAERRDWDRLPISIPFFVRGRKLTGEEFLEFATA
Ga0302294_100236761	3300028740	Fen	VRRPVSVAERRDWDRLPISIPFFVRGRKLTGEEFLEFATALNLSAGGVLLATRRYLDPGTQISLEVPV
Ga0302156_103203941	3300028748	Bog	VRRTVSVAERRGWDRLPISIPFFVRGTSASGEEFLEFATALNLSAGGLLLATRRYLDPGTQISL
Ga0302189_101167281	3300028788	Bog	VRRTVSVAERRGWDRLPISIPFFVRGTSASGEEFLEFATALNLSAGGLLLATR
Ga0308309_105850251	3300028906	Soil	VRRTVSVAERRGWDRLPISIPFFVRGTTAAGEEFLEFATAL
Ga0311369_100940294	3300029910	Palsa	LRRSVSVAERRGWDRLPISIPFFVRGKNSNGEEFLEFATALNLSAGGVLLA
Ga0311371_122947881	3300029951	Palsa	LRRSVSVAERRGWDRLPISIPFFVRGKNSNGEEFLEFATALNLSAGGVLLATRRYLDPGTEITLE
Ga0302293_102282711	3300029981	Fen	VRRPVSVAERRDWDRLPISIPFFVRGRKLTGEEFLEFATALNLSAGGVLLATRRYLDPGTQISLEVPVALVNKAQLPQSVSLL
Ga0311336_100295061	3300029990	Fen	VRRPVSVAERRDWDRLPISIPFFVRGRKLTGEEFLEFATALNLSAGGVLLATRRYLDPGTQISLEVPVALV
Ga0302172_101361921	3300030003	Fen	VRLPTTVNERRDWDRLPIAVPFFARGKRGNGDEFLEFATALNLSAGGVL
Ga0311333_113660332	3300030114	Fen	VRRPVSVAERRDWDRLPISIPFFVRGRKLTGEEFLEFATALNLSAGGVLLATRRYLDPGTQISLEVPVALVNKA
Ga0311360_106418171	3300030339	Bog	VRRPVSVAERRDWDRLPISIPFFVRGRKLTGEEFLEFAT
Ga0311335_107522341	3300030838	Fen	VRLPTTVNERRDWDRLPIAIPFFARGKRGNGDEFLEFATALNLSAGGVLLATRRYLDPGS
Ga0170824_1274091641	3300031231	Forest Soil	VRRSVSVADRREWERLPISIPFFVRGKKANGEEFLEFATALNLSAGGVLLAARRYLE
Ga0170818_1057408641	3300031474	Forest Soil	VRRPISVAERRDWDRLPISIPFFVRGRKLTGEDFLEFATALNLSAGGVLLATKRYLDPGTQISLEIPIALV
Ga0318541_103672702	3300031545	Soil	VRHTVSVEERRDWDRLPISIPFFVRGRKAGGEEFLEFATALNLSAG
Ga0318515_105949281	3300031572	Soil	VRRSVSVAERRDWDRLPISIPFFVRGKKSGGEEFLEFATALNLSAGGVLLAARRYLEPGTQLSLEVPVALVNKAQLPRSVSLLHA
Ga0310915_104943432	3300031573	Soil	VPRRTLPVERRGWDRLPISIPFFVRGSKPTGEEFLEFATALNLSAGGVLLATRRYLEPGTRISLEVPVALVNK
Ga0265314_103167841	3300031711	Rhizosphere	VRRSASVAERRGWDRLPISIPFFVRGTKPGGEEFLEFAT
Ga0306917_104109591	3300031719	Soil	VRRAARLADRREWDRLPISIPFFVRGKKDSGEEFLEFATALNLSAGGVLLAARRFLEPGTQITLEVPVALVNKA
Ga0306917_114468401	3300031719	Soil	VRRPMPLAERREWDRLPLSIPFFLRGKKASGEEFLEFATALNLSAGGVLLAARRYLDPGTQISLEVPVALVNKAQLPRSVSL
Ga0306925_110145341	3300031890	Soil	VRRAVSVAERRDWDRLPISIPFFVRGRKGGGEEFLEFATALNLSAGGVLLAT
Ga0306921_110541312	3300031912	Soil	VRRAVSVAERRDWDRLPISIPFFVRGRKGGGEEFLEFATALNLSAGGVLLATRRYLEP
Ga0306921_123404091	3300031912	Soil	VRRTGSVAERRDWDRLPISIPFFVRGRKGGGEEFLEFATALNLSAGGVLLATRRYLEPGTPISLEVPVALVNKAQLPRSVSL
Ga0310909_109252291	3300031947	Soil	VRRPMPLAERREWDRLPLSIPFFLRGKKASGEEFLEFATALNLSAGGVLLAARRYLDPGTQISLEVPVALVNKA
Ga0306926_112784491	3300031954	Soil	VRRSVSVAERRDWDRLPISIPFFVRGKKSGGEEFLEFATALNLSAGGV
Ga0306922_102245651	3300032001	Soil	VRRAASVAERRGWERLPISIPFFVRGAKPGGEEFLEFATALNLSAGGLL
Ga0306922_112004252	3300032001	Soil	VRRSERLADRREWDRLPISIPFFVRGKKDSGEEFLEFATALNLSAGGVLLATRRFLDPGTQITLEV
Ga0306922_118680891	3300032001	Soil	VRRPMPLAERREWDRLPLSIPFFLRGKKASGEEFLEFATALNLSAGGVLLAARRYLDPGTQISLEVPVALVNKAQLPRS
Ga0318533_108568221	3300032059	Soil	VRRAASVAERRGWERLPISIPFFVRGAKPGGEEFLEFATAVNLSAGGLLL
Ga0318533_110319971	3300032059	Soil	VRRAVSVAERRDWDRLPISIPFFVRGRKGGGEEFLEFATALNLSAGGVLLATRRYLE
Ga0335082_106852221	3300032782	Soil	VRHSLPGLDRRIWDRLPISIPFFVRGTKSDGEDFLEFATALNLSAGGVLLA
Ga0335079_103067413	3300032783	Soil	VRRTASVAERRGWDRLPISIPFFVRGKNSDGDEFLEFATALNLSAGGVLLATRRYL
Ga0335078_108016852	3300032805	Soil	VRRSVSVAERRGWERLPISIPFFVRGTTASGEEFLEFATAL
Ga0335080_109017381	3300032828	Soil	VRRSVSVAERRGWERLPISIPFFVRGSTASGEEFLEFATALN
Ga0335080_112153621	3300032828	Soil	VRRTQSVAERRDWDRLPISIPFFVRGRKGGGEEFLEFATALNLSAGGVLLATRRYLEPGTQLSLEVPVALVNKAQLPRSVSLLHATVL
Ga0335070_102592953	3300032829	Soil	LEQTAKADRRACVRLPISVPFFVRGNKRNAEEFLEFATALNVSATGALIATRRYIDPGT
Ga0335070_111445312	3300032829	Soil	VRRTVSTAERRGWERLPISIPFFVRGNTPSGEEFLEFATALNLSAGGVLLATRRYLDPGTTISLEVPVALVNK
Ga0335081_107441952	3300032892	Soil	VRRTVSVAERRGWERLPISIPFFVRGSTPAGEEFLD
Ga0335069_105709252	3300032893	Soil	VRRSASVAERRGWDRLPISIPFFVRGTKPGGEEFLEFATALNLSAGGLL
Ga0335069_110754541	3300032893	Soil	VRRTVSVAERRGWDRLPISIPFFVRGTSGNGEEFLEFATAL
Ga0335069_113664772	3300032893	Soil	VRRAVSVADRREWERLPISIPFFVRGKKSTGEEFLEFATALNLSA
Ga0335075_117292551	3300032896	Soil	VRRNASVAERRGWERLPISIPFFVRGDNAAGEEFLEFATALNLSASGVLLATRRYLDPGTKISLEVPVALVNKAQLPRSVS
Ga0335072_101529093	3300032898	Soil	VRRTVSVAERRGWDRLPISIPFFVRGTSTSGEEFLEFATALNLSAGGLLLATRRYLEPGTQISL
Ga0335083_115372722	3300032954	Soil	MGKQNERRKWERLPISIPFFMRVSKGNGEESLDFAPALN
Ga0335073_100684935	3300033134	Soil	VRRTVSVAERRGWERLPISIPFFVRGSTASGEEFLEFATALNLSAGGVLLATRRYLDPGTKISLEVPVA
Ga0335073_105641092	3300033134	Soil	VRRTVSVAERRGWERLPISIPFFVRGKNADGEEFLEFATALNLSAGGVLLAT
Ga0335073_111608811	3300033134	Soil	VRRSVSVAERRGWERLPISIPFFVRGSTASGEEFLEFATALNLSAGGVLLATRRYLDP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065697

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign