Metagenome / Metatranscriptome Family F065772

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065772
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	47 residues
Representative Sequence	MIENITDNLSTDIAATEPMDDAELQAIITQDLTDAVSYVDSDLSPTRA
Number of Associated Samples	104
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	85.83 %
% of genes near scaffold ends (potentially truncated)	94.49 %
% of genes from short scaffolds (< 2000 bps)	88.19 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (55.906 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (22.047 % of family members)
Environment Ontology (ENVO)	Unclassified (49.606 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (55.118 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.95% β-sheet: 0.00% Coil/Unstructured: 71.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF08241	Methyltransf_11	25.20
PF13489	Methyltransf_23	13.39
PF00535	Glycos_transf_2	3.94
PF03764	EFG_IV	0.79
PF10926	DUF2800	0.79
PF13884	Peptidase_S74	0.79
PF08774	VRR_NUC	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0480	Translation elongation factor EF-G, a GTPase	Translation, ribosomal structure and biogenesis [J]	0.79

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.83 %
Unclassified	root	N/A	14.17 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	61.42 %
cellular organisms	root	All Organisms → cellular organisms	24.41 %
Unclassified	root	N/A	14.17 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	55.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.41 %
Unclassified	root	N/A	14.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.94 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	55.91 %
Unclassified	root	N/A	14.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	55.91 %
Unclassified	root	N/A	14.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.94 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	55.91 %
Unclassified	root	N/A	14.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	55.91 %
Unclassified	root	N/A	14.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	55.91 %
Unclassified	root	N/A	14.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_103913042	Not Available	555	Open in IMG/M
3300002835\|B570J40625_100438328	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1253	Open in IMG/M
3300003388\|JGI25910J50241_10168969	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300003394\|JGI25907J50239_1053215	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	821	Open in IMG/M
3300003493\|JGI25923J51411_1055746	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	704	Open in IMG/M
3300003497\|JGI25925J51416_10107705	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	660	Open in IMG/M
3300005581\|Ga0049081_10038743	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1811	Open in IMG/M
3300005582\|Ga0049080_10122300	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	879	Open in IMG/M
3300005582\|Ga0049080_10149219	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	783	Open in IMG/M
3300005584\|Ga0049082_10118726	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300006484\|Ga0070744_10193933	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	579	Open in IMG/M
3300006484\|Ga0070744_10200427	Not Available	568	Open in IMG/M
3300006802\|Ga0070749_10384248	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	776	Open in IMG/M
3300006802\|Ga0070749_10424923	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	731	Open in IMG/M
3300006805\|Ga0075464_11062803	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	509	Open in IMG/M
3300007544\|Ga0102861_1067366	All Organisms → cellular organisms → Bacteria → Proteobacteria	939	Open in IMG/M
3300007550\|Ga0102880_1150711	Not Available	609	Open in IMG/M
3300007559\|Ga0102828_1207886	Not Available	503	Open in IMG/M
3300007622\|Ga0102863_1057854	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1134	Open in IMG/M
3300007639\|Ga0102865_1205539	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	587	Open in IMG/M
3300007992\|Ga0105748_10400573	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	592	Open in IMG/M
3300008055\|Ga0108970_10253948	All Organisms → cellular organisms → Bacteria → Proteobacteria	755	Open in IMG/M
3300008107\|Ga0114340_1006716	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7629	Open in IMG/M
3300008107\|Ga0114340_1112238	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1070	Open in IMG/M
3300008120\|Ga0114355_1249479	All Organisms → Viruses	523	Open in IMG/M
3300008259\|Ga0114841_1207200	Not Available	699	Open in IMG/M
3300008266\|Ga0114363_1028273	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2392	Open in IMG/M
3300008267\|Ga0114364_1084272	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1032	Open in IMG/M
3300008339\|Ga0114878_1264347	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	524	Open in IMG/M
3300009026\|Ga0102829_1073053	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1050	Open in IMG/M
3300009026\|Ga0102829_1221849	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	617	Open in IMG/M
3300009056\|Ga0102860_1179994	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	602	Open in IMG/M
3300009068\|Ga0114973_10056084	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2312	Open in IMG/M
3300009079\|Ga0102814_10735917	Not Available	543	Open in IMG/M
3300009082\|Ga0105099_11013744	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	529	Open in IMG/M
3300009152\|Ga0114980_10472634	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	715	Open in IMG/M
3300009158\|Ga0114977_10530944	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	641	Open in IMG/M
3300009158\|Ga0114977_10725196	Not Available	528	Open in IMG/M
3300009165\|Ga0105102_10026502	All Organisms → cellular organisms → Bacteria	2398	Open in IMG/M
3300009165\|Ga0105102_10541908	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300010370\|Ga0129336_10107381	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1633	Open in IMG/M
3300010885\|Ga0133913_13589490	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1008	Open in IMG/M
3300011010\|Ga0139557_1010982	All Organisms → Viruses → Predicted Viral	1770	Open in IMG/M
3300011010\|Ga0139557_1014555	All Organisms → Viruses → Predicted Viral	1497	Open in IMG/M
3300011010\|Ga0139557_1066668	Not Available	604	Open in IMG/M
3300011011\|Ga0139556_1007590	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1572	Open in IMG/M
3300012012\|Ga0153799_1070015	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	634	Open in IMG/M
3300012017\|Ga0153801_1043220	All Organisms → cellular organisms → Bacteria → Proteobacteria	796	Open in IMG/M
3300012665\|Ga0157210_1000149	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35738	Open in IMG/M
3300012666\|Ga0157498_1010185	All Organisms → cellular organisms → Bacteria → Proteobacteria	1500	Open in IMG/M
3300012964\|Ga0153916_13338852	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300013004\|Ga0164293_10973531	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	531	Open in IMG/M
3300017716\|Ga0181350_1029484	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1515	Open in IMG/M
3300017716\|Ga0181350_1036108	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300017716\|Ga0181350_1131008	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	596	Open in IMG/M
3300017723\|Ga0181362_1039673	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	993	Open in IMG/M
3300017747\|Ga0181352_1205998	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	505	Open in IMG/M
3300017754\|Ga0181344_1003788	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5225	Open in IMG/M
3300017761\|Ga0181356_1032969	All Organisms → Viruses → Predicted Viral	1850	Open in IMG/M
3300017761\|Ga0181356_1057978	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300017766\|Ga0181343_1120931	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	736	Open in IMG/M
3300017774\|Ga0181358_1085998	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300017777\|Ga0181357_1139670	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300017780\|Ga0181346_1032164	All Organisms → Viruses → Predicted Viral	2170	Open in IMG/M
3300017785\|Ga0181355_1091809	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1262	Open in IMG/M
3300019784\|Ga0181359_1221427	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	594	Open in IMG/M
3300019784\|Ga0181359_1268654	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	507	Open in IMG/M
3300020048\|Ga0207193_1074268	All Organisms → cellular organisms → Bacteria	3294	Open in IMG/M
3300020048\|Ga0207193_1147769	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1981	Open in IMG/M
3300020205\|Ga0211731_10625622	Not Available	535	Open in IMG/M
3300020498\|Ga0208050_1009998	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1076	Open in IMG/M
3300020554\|Ga0208599_1056173	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	555	Open in IMG/M
3300021962\|Ga0222713_10279254	All Organisms → Viruses → Predicted Viral	1074	Open in IMG/M
3300022179\|Ga0181353_1009531	All Organisms → cellular organisms → Bacteria	2415	Open in IMG/M
3300022179\|Ga0181353_1109654	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	670	Open in IMG/M
3300022179\|Ga0181353_1147730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300024866\|Ga0255272_1128193	All Organisms → Viruses	631	Open in IMG/M
3300027124\|Ga0255116_1047053	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	565	Open in IMG/M
3300027141\|Ga0255076_1042334	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	794	Open in IMG/M
3300027489\|Ga0255095_1086103	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	531	Open in IMG/M
3300027563\|Ga0209552_1056983	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1099	Open in IMG/M
3300027563\|Ga0209552_1082392	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	878	Open in IMG/M
3300027608\|Ga0208974_1166498	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	550	Open in IMG/M
3300027608\|Ga0208974_1169500	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	543	Open in IMG/M
3300027649\|Ga0208960_1138201	Not Available	619	Open in IMG/M
3300027679\|Ga0209769_1163971	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	699	Open in IMG/M
3300027683\|Ga0209392_1119778	All Organisms → cellular organisms → Bacteria → Proteobacteria	831	Open in IMG/M
3300027733\|Ga0209297_1344382	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	542	Open in IMG/M
3300027736\|Ga0209190_1318641	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	587	Open in IMG/M
3300027782\|Ga0209500_10119396	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1279	Open in IMG/M
3300027785\|Ga0209246_10024350	All Organisms → cellular organisms → Bacteria	2281	Open in IMG/M
3300027798\|Ga0209353_10075223	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1535	Open in IMG/M
3300027804\|Ga0209358_10000819	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	26347	Open in IMG/M
3300027897\|Ga0209254_10352899	All Organisms → cellular organisms → Bacteria → Proteobacteria	1106	Open in IMG/M
3300027900\|Ga0209253_10440822	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300027900\|Ga0209253_10705681	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	727	Open in IMG/M
3300027969\|Ga0209191_1258860	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300027971\|Ga0209401_1010520	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5155	Open in IMG/M
3300031758\|Ga0315907_10306168	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1304	Open in IMG/M
3300031758\|Ga0315907_10391435	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1122	Open in IMG/M
3300031758\|Ga0315907_11012889	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300031772\|Ga0315288_11646969	Not Available	520	Open in IMG/M
3300031784\|Ga0315899_10555973	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300031787\|Ga0315900_10580080	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	826	Open in IMG/M
3300031834\|Ga0315290_10394923	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1212	Open in IMG/M
3300031857\|Ga0315909_10072606	All Organisms → cellular organisms → Bacteria	3071	Open in IMG/M
3300031857\|Ga0315909_10713733	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300031873\|Ga0315297_11317449	Not Available	588	Open in IMG/M
3300031951\|Ga0315904_10811205	All Organisms → cellular organisms → Bacteria → Proteobacteria	769	Open in IMG/M
3300031951\|Ga0315904_10868679	All Organisms → cellular organisms → Bacteria → Proteobacteria	733	Open in IMG/M
3300031963\|Ga0315901_10084217	All Organisms → cellular organisms → Bacteria	2982	Open in IMG/M
3300031999\|Ga0315274_11554029	Not Available	625	Open in IMG/M
3300032046\|Ga0315289_10711613	Not Available	906	Open in IMG/M
3300032092\|Ga0315905_10199486	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1970	Open in IMG/M
3300032093\|Ga0315902_10783033	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	757	Open in IMG/M
3300032116\|Ga0315903_10220675	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300032342\|Ga0315286_11043421	Not Available	810	Open in IMG/M
3300032401\|Ga0315275_11904798	Not Available	629	Open in IMG/M
3300033233\|Ga0334722_11270824	Not Available	515	Open in IMG/M
3300033981\|Ga0334982_0169399	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1100	Open in IMG/M
3300033995\|Ga0335003_0027560	All Organisms → cellular organisms → Bacteria	3068	Open in IMG/M
3300034066\|Ga0335019_0551458	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	681	Open in IMG/M
3300034092\|Ga0335010_0650224	Not Available	526	Open in IMG/M
3300034106\|Ga0335036_0247131	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1210	Open in IMG/M
3300034117\|Ga0335033_0394615	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	684	Open in IMG/M
3300034118\|Ga0335053_0526719	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	692	Open in IMG/M
3300034272\|Ga0335049_0779516	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.21%
Host-Associated	Host-Associated	0.79%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.21%
Plants	Host-Associated → Plants	0.79%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	85.04%
Marine	Environmental → Aquatic → Marine	14.17%
Leaf	Host-Associated → Plants → Leaf	0.79%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	32.28%
Lake	Environmental → Aquatic → Freshwater → Lake	32.28%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	10.24%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	7.09%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.15%
River	Environmental → Aquatic → Freshwater → River	3.15%
Coastal	Environmental → Aquatic → Marine → Coastal	3.94%
Ice	Environmental → Aquatic → Freshwater → Ice	2.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.79%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.79%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.79%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	27.56%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	24.41%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	10.24%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	7.87%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	7.09%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.15%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.15%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.94%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.36%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.79%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.79%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	22.05%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	10.24%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	7.87%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.09%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	7.09%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	6.30%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	5.51%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.15%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.15%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.15%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.36%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.36%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	2.36%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.36%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	1.57%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.57%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.79%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	0.79%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.79%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.79%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.79%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.79%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.79%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.79%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003493	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN	Environmental	Open in IMG/M
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007550	Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008339	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Sept 29, 2014 all contigs	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300011011	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1m	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300012666	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020554	Freshwater microbial communities from Lake Mendota, WI - 17AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300024866	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027124	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepC_8h	Environmental	Open in IMG/M
3300027141	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepB_8h	Environmental	Open in IMG/M
3300027489	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepC_8d	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027649	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1039130421	3300001213	Wetland	MNDIENLSTDIAAQTPMDDAELQAIVTQDLTDAISY
B570J40625_1004383283	3300002835	Freshwater	MIENITENLSTDIAAQEPMDDAELQSIITQDLTDAVSYVDSDLSPTRAKGTEYYR
JGI25910J50241_101689691	3300003388	Freshwater Lake	MNDIENLSTDIAATEPMDDAELQAIVTQDLTDAVSYVDSDLSPTRAKGT
JGI25907J50239_10532151	3300003394	Freshwater Lake	MIENITDNLSTDIASQNQMDDAELQAIITQDLTDAISYVDS
JGI25923J51411_10557462	3300003493	Freshwater Lake	MNMNELPITTDLAAQEQMDDTELEAIIGQDLTDAVSYIDSDISPIRAMGTAYYRAARLLALTPTH*
JGI25925J51416_101077052	3300003497	Freshwater Lake	MNMNDMPVTTDVAAQEQMDDTELEAIIGQDLTDAVSYIDSDISPIRAMGTAYY
Ga0049081_100387435	3300005581	Freshwater Lentic	MIENDIPENLSTDIAAKEPMDDAELQAIVTQDLTDAVSYVDSDLSPT
Ga0049080_101223001	3300005582	Freshwater Lentic	MNEQDITNTISTDIAAKTQMDDAELQSIITQDLTDAVSYIDSDLSPTRAKGTEYY
Ga0049080_101492193	3300005582	Freshwater Lentic	MIEQDITENLSTDIAATEPMDDAELQAIITQDLTDAVSYVDSDLSPTRAKG
Ga0049082_101187263	3300005584	Freshwater Lentic	MNDIENLSTDIAATEPMDDAELQAIVTQDLTDAVSYVDSDLSPTRAKGTEYY
Ga0070744_101939332	3300006484	Estuarine	MNMNELPISTDVAAQEPMDDDELQAIITQDITDAISYIDTDISPTRARGTEYY
Ga0070744_102004271	3300006484	Estuarine	MNDIENLSTDIAAKEPMDDMELQAIITQDLTDAISYVDSDLSPT
Ga0070749_103842481	3300006802	Aqueous	MIENITENLSTDIAAKQPMDDAELQSIITQDLTDAV
Ga0070749_104249231	3300006802	Aqueous	MIENITDNLSTDIAAQQPMDDAELQAIITQDLTDAVSYVDSDLSPTRAKGTEYYR
Ga0075464_110628031	3300006805	Aqueous	MIEQNITENLSTDIAAKQPMDDAELQSIITQDLTDAVSYVDSDLSPTRAKGTEYYRGD
Ga0102861_10673663	3300007544	Estuarine	MNEQDITSAINTDIAATEPMDDMELQAIITQDLTDAISYVDSDLSPTRA*
Ga0102880_11507111	3300007550	Estuarine	MMNELLTTDVSAIEPMDDAELEAIIGQDLTDAVSYVDTYLSPIRARGTEYYRGD
Ga0102828_12078861	3300007559	Estuarine	MMNELLTTDVSAIEPMDDAELEAIIGQDLTDAVSYVDSDLSPIRARGTEY
Ga0102863_10578543	3300007622	Estuarine	MIENITENLSTDIAATEPMDDAELQAIVTQDLTDAVSYVDSDLSP
Ga0102865_12055392	3300007639	Estuarine	MIENITDNLSTDIAATEPMDEMELQAIITQDLTDAISYVDSDLSPT
Ga0105748_104005732	3300007992	Estuary Water	MIEQDITENLSTDIAATEPMDDMELQAIITQDLTDAISYVDSDLSPTRA
Ga0108970_102539482	3300008055	Estuary	MNDIENLSTDIAATEPMDEMELQAIITQDLTDAISYVDSDLSPTRAKGTEYYR
Ga0114340_10067161	3300008107	Freshwater, Plankton	MIEQNITENLSTDIAAKQPMDDAELQSIITQDLTDAVSYVDSDLSPT
Ga0114340_11122383	3300008107	Freshwater, Plankton	MNEQDITSAINTDITATEPMDEMELQAIITQDLTDAISYVDSDLSPTRA
Ga0114355_12494791	3300008120	Freshwater, Plankton	MNMNDIPLSVDMAAPEPMDDAELQAIINGELQDAVSYIDSDISPIRAKGTE
Ga0114841_12072002	3300008259	Freshwater, Plankton	MIENITDNLSTDIAATEPMDDAELQAIITQDLTDAVSYVDSDLSPTRAKGTEY*
Ga0114363_10282731	3300008266	Freshwater, Plankton	MIENDIPENLSTDIAATQPMDDAELQAIVTQDLTDAVSYVDSDLSPTR
Ga0114364_10842721	3300008267	Freshwater, Plankton	MIENITDNLSTDIASQNQMDDAELQAIITQDLTDAISYVDSDLSP
Ga0114878_12643472	3300008339	Freshwater Lake	MIENITDNLSTDIAATEPMDDMELQAIITQDLTDAVSYVD
Ga0102829_10730531	3300009026	Estuarine	MIENDIPENLSTDIAAKEPMDEMELQAIITQDLTDAI
Ga0102829_12218492	3300009026	Estuarine	MIENITENLSTDIAATEPMDDAELQAIITQDLTDAVSYVD
Ga0102860_11799941	3300009056	Estuarine	MIENITENLSTDIAATEPMDEMELQAIITQDLTDAVSY
Ga0114973_100560841	3300009068	Freshwater Lake	MIDNMTENLSTDIAATEPMDDAELQAIITQDLTDAVSYVDSDLSPTRAKGTEY
Ga0102814_107359173	3300009079	Estuarine	MNESEISTDIAAQTPMDDAELQSIITQELTDAVSYV
Ga0105099_110137441	3300009082	Freshwater Sediment	MIQQNITNTINTDISSTAPMDDAELQAIITQDLVDAV
Ga0114980_104726342	3300009152	Freshwater Lake	MIDNMTENLSTDIAATEPMDDAELQAIITQDLTDAVSYVDSDLSPTRAKG
Ga0114977_105309442	3300009158	Freshwater Lake	MNMNDMPVTTDVAAQEPMDDTELEAIIGQDLTDAVSYIDSDISPVRAMGTAYYR
Ga0114977_107251962	3300009158	Freshwater Lake	MNDLENLSTDIAAKQPMDDAELQAIITQDLTDAVSYVDSDLSPTRAKGTEY
Ga0105102_100265026	3300009165	Freshwater Sediment	MNEQDITSAITTDIVATKPMDDAELESIIGQDLTDAVS
Ga0105102_105419082	3300009165	Freshwater Sediment	MNDIENLSTDIAATEPMDDAELQAIITQDLTDAVS
Ga0129336_101073811	3300010370	Freshwater To Marine Saline Gradient	MIENITENLSTDIAAKEPMDDAELQSIITQDLTDAISYVDSDLSPTRAKGT*
Ga0133913_135894901	3300010885	Freshwater Lake	MIENDIPENLSTDIAAKEPMDEMELQAIITQDLTDAISYVDS
Ga0139557_10109821	3300011010	Freshwater	MIENITDNLSTDIASQNQMDDAKLQAIITQDLTDAISYVDSDLSPTRARGTEYYRGD
Ga0139557_10145555	3300011010	Freshwater	MNEKITTDIAATESMDDAELQAIITQDLTDAISYVDSDLS
Ga0139557_10666682	3300011010	Freshwater	MNEKITTDIAAQNQMDDAELQAIITQDLTDAISYVDSDLSPTRARGT
Ga0139556_10075901	3300011011	Freshwater	MIENITDNLSTDIASQNQMDDAELQAIITQDLTDAISYVDSDLSPTRARGTE
Ga0153799_10700152	3300012012	Freshwater	MIENITDNLSTDIAATEPMDDAELQSIITQDLVDAVSYVDSDLSPTRAKGTEYYR
Ga0153801_10432203	3300012017	Freshwater	MNDIENLSTDIAATEPMDDMELQAIITQDLTDAISYVDSDLSPT
Ga0157210_100014935	3300012665	Freshwater	MNMNDMPVTTDVAAQETMDDTELEAIIGQDLTDAVSYIDSDISPVRAMGTAYYRXXXXX
Ga0157498_10101851	3300012666	Freshwater, Surface Ice	MNDIENLSTDIAATEPMDDAELQAIVTQDLTDAISYVDSDLSPTR
Ga0153916_133388521	3300012964	Freshwater Wetlands	MNEQDITNAINTDIVAAKPMDDAELESIISQDLVDAVSYVDSDLSPTRAK
Ga0164293_109735312	3300013004	Freshwater	MIEKVTENLSTDIAATEPMDDAELQAIITQDLVDAVSYVDSDLSPTRAKG
Ga0181350_10294844	3300017716	Freshwater Lake	MIENITDNLSTDIAATEPMDDAELQAIITQDLTDAISYVDSDLSPTRA
Ga0181350_10361083	3300017716	Freshwater Lake	MNMNDMPVTTDVAAQEPMDDTELEAIIGQDLTDAVSYIDSDISPIRAMGTAYY
Ga0181350_11310082	3300017716	Freshwater Lake	MNMNELPITTDVAAQEQMDDTELEAIIGQDLTDAVSYIDSDISPIRAMGT
Ga0181362_10396733	3300017723	Freshwater Lake	MNDMNISTDIAAKTKMDDAELQSIITQDLTDAVSY
Ga0181352_12059982	3300017747	Freshwater Lake	MIEKVTENLSTDIAATEPMDDAELQAIITQDLTDAVSYVD
Ga0181344_100378812	3300017754	Freshwater Lake	MIENITDNLSTDIAAQEPMDDMELQAIITQDLTDAVSYVDS
Ga0181356_10329696	3300017761	Freshwater Lake	MNEKITTDIAATEPMDDAELQAIITQDLTDAISYV
Ga0181356_10579781	3300017761	Freshwater Lake	MIEQDITENLSTDIAATEPMDDAELQAIITQDLTDAVSYVDSDLSPTRAK
Ga0181343_11209312	3300017766	Freshwater Lake	MIENITDNLSTDIAATEPMDDAELQAIITQDLTDAISYVDSDLSPTRARG
Ga0181358_10859981	3300017774	Freshwater Lake	MNMNELPITTDLAAQEQMDDTELEAIIGQDLTDAVSYIDSDISPIRAMGTA
Ga0181357_11396703	3300017777	Freshwater Lake	MNMNELPITTDLAAQEQMDDTELEAIIGQDLTDAVSYIDSDISPIRAMGTAYYRG
Ga0181346_10321646	3300017780	Freshwater Lake	MNMNDMPITTDVAAQEQMDDTELEAIIGQDLTDAVSYIDSDISPIRAMGTAY
Ga0181355_10918091	3300017785	Freshwater Lake	MNDLENLSTDIAAKQPMDDAELQAIVTQDLTDAVSYV
Ga0181359_12214271	3300019784	Freshwater Lake	MIENITDNLSTDIAATEPMDDAELQAIITQDLTDAISYVDSDLSPTRARGTL
Ga0181359_12686541	3300019784	Freshwater Lake	MNMNELPITTDLAAQEQMDDTELEAIIGQDLTDAVSYIDSDISPIRAMGTAYYRGD
Ga0207193_10742681	3300020048	Freshwater Lake Sediment	MIENITENLSTDIAATEPMDDMELQSIITQDLTDAVSYVDSDLSPTRAKGTEYYR
Ga0207193_11477694	3300020048	Freshwater Lake Sediment	MNDIENLSTDIAAKEPMDDAELQAIVTQDLTDAVSYVDSDLSPTRAKGTEYYR
Ga0211731_106256221	3300020205	Freshwater	MMNELPTTDISATEPMDDAELEAIIGQDLTDAVSYVDSDLSPIRARGTE
Ga0208050_10099983	3300020498	Freshwater	MIEQDITENLSTDIAATEPMDDMELQAIITQDLTDAISYVDSDLSPT
Ga0208599_10561732	3300020554	Freshwater	MIENITDNLSTDIASQNQMDDAELQAIITQDLTDAISYVDSDLSPTRA
Ga0222713_102792545	3300021962	Estuarine Water	MNMTDLPLNVDVAAPEPMDDSELEAIVNGELQDAVSYIDSDISPIRAKGT
Ga0181353_10095317	3300022179	Freshwater Lake	MNDIENLSTDIAATEPMDEMELQAIITQDLTDAISYVDSDLS
Ga0181353_11096542	3300022179	Freshwater Lake	MIEKVTENLSTDIAATEPMDDAELQAIITQDLTDAVSYVDSDLSPTRAKG
Ga0181353_11477302	3300022179	Freshwater Lake	MNDIENLSTDIAATEPMDDAELQAIVTQDLTDAISYVDSDL
Ga0255272_11281933	3300024866	Freshwater	MNMNEIGLSVDVAAPEPMDDAELQAIINGELQDAVSYIDSDISPIRAKGTEYY
Ga0255116_10470532	3300027124	Freshwater	MIENITDNLSTDIAATEPMDDAELQAIITQDLTDAISYVDSDL
Ga0255076_10423342	3300027141	Freshwater	MIENITDNLSTDIAAAEPMDDAELQAIVTQDLTDAISYVDSDLSPTRAKGTEY
Ga0255095_10861031	3300027489	Freshwater	MIEQDITENLSTDIAATEPMDEMELQAIITQDLTDAIS
Ga0209552_10569831	3300027563	Freshwater Lake	MIENITDNLSTDIAATEPMDDAELQAIITQDLTDAVSYVDSDLSPTRA
Ga0209552_10823923	3300027563	Freshwater Lake	MNMNELPITTDVVAQEQMDDTELEAIIGQDLTDAVSYIDSDISPIRAMGTAYYRGDPFG
Ga0208974_11664982	3300027608	Freshwater Lentic	MIENITENLSTDIAATEPMDDMELQAIITQDLTDAISYVDSDLSPTRAKGTE
Ga0208974_11695002	3300027608	Freshwater Lentic	MIENITDNLSTDIAATEPMDDAELQAIITQDLTDAVSYVDSDLSPTRAK
Ga0208960_11382011	3300027649	Freshwater Lentic	MNEKITTDIAAQNQMDDAELQAIITQDLTDAISYVDSDLSPTRA
Ga0209769_11639712	3300027679	Freshwater Lake	MIENITDNLSTDIAATEPMDDAELQAIVTQDLTDAVSYVDSDLSPTRAK
Ga0209392_11197781	3300027683	Freshwater Sediment	MNEQDITNAITTDIAATKPMDDAELESIIGQDLTDAVSYVDSDLSP
Ga0209297_13443822	3300027733	Freshwater Lake	MNMNDMPVTTDVAAQEPMDDTELEAIIGQDLTDAVSYIDSDISPIRAMGTAYYRGD
Ga0209190_13186412	3300027736	Freshwater Lake	MNMNDMPVTTDVAAQEPMDDTELEAIIGQDLTDAVSYIDSDISPVRAMGTAYYRGDPFG
Ga0209500_101193962	3300027782	Freshwater Lake	MNDISKQDIEQNISTDVTATEPMDDAELQSIITSDLTDAISYVDTDLSPTRARVSQRP
Ga0209246_100243505	3300027785	Freshwater Lake	MNDIENLSTDIAATEPMDDAELQAIITQDLTDAVSYVDSDLSPTRAK
Ga0209353_100752234	3300027798	Freshwater Lake	MNDIENLSTDIAATEPMDEMELQAIITQDLTDAISYVDSDLSPTRAKGTEY
Ga0209358_100008191	3300027804	Freshwater Lake	MIEKVTENLSTDIAATEPMDDAELQAIITQDLTDAVSYV
Ga0209254_103528991	3300027897	Freshwater Lake Sediment	MNDIENLSTDIAAKEPMDDAELQAIVTQDLTDAVSYVDSDLSPTRAKGTDH
Ga0209253_104408223	3300027900	Freshwater Lake Sediment	MIENITENLSTDIAATEPMDDAELQAIITQDLTDAVSYVDSDLSP
Ga0209253_107056811	3300027900	Freshwater Lake Sediment	MNEQDITNVINTDIVAAKPMDDAELESIISQDLVDAVSY
Ga0209191_12588602	3300027969	Freshwater Lake	MNDLENLSTDIAAKQPMDDAELQAIVTQDLTDAVSYVDS
Ga0209401_101052012	3300027971	Freshwater Lake	MIDNMTENLSTDIAATEPMDDAELQAIITQDLTDAVSYV
Ga0315907_103061681	3300031758	Freshwater	MIENITDNLSTDIASQNQMDDAELQAIITQDLTDAIS
Ga0315907_103914353	3300031758	Freshwater	MNMNDIPLSVDMAAPEPMDDAELQAIINGELQDAVSYIDSDISPIRAK
Ga0315907_110128893	3300031758	Freshwater	MINEMGLSIDVAAPEPMDDAELQAIINGELQDAVSYIDSDISPIRAKGTE
Ga0315288_116469691	3300031772	Sediment	MNEKITTDIAAQTPMDDAELQAIVTQDLTDAISYVDSDLSPTRARGTEYY
Ga0315899_105559733	3300031784	Freshwater	MIEQDITENLSTDIAATEPMDDAELQAIITQDLTDAVSYV
Ga0315900_105800803	3300031787	Freshwater	MIENITDNLSTDIAATQPMDDAELQSIITQDLTDAVSYVDSDLSPTRAK
Ga0315290_103949231	3300031834	Sediment	MMNELLTTDVSAIEPMDDAELEAIIGQDLTDAVSYVDSDLSPIRARGTEYYRGDRF
Ga0315909_100726067	3300031857	Freshwater	MINEMGLSIDVAAPEPMDDAELQAIINGELQDAVSYIDSDISPIRAKGTEYY
Ga0315909_107137331	3300031857	Freshwater	MNEQDITSAINTDIGAKEPMDDAELQAIVTQDLTDAVS
Ga0315297_113174491	3300031873	Sediment	MNESEISTDIAAQTPMDDAELQAIVTQDLTDAVSYVDSDLSPTRARGT
Ga0315904_108112051	3300031951	Freshwater	MNEQDITSAINTDIAATEPMDDAELQAIVTQDLTD
Ga0315904_108686791	3300031951	Freshwater	MNDIENLSTDIAAKQPMDDAELQAIVTQDLTDAVSYVDSDL
Ga0315901_100842178	3300031963	Freshwater	MIENITDNLSTDIAATEPMDDAELQAIITQDLTDAV
Ga0315274_115540291	3300031999	Sediment	MNESEISTDIAATEPMDDAELQAIVTQDLTDAVSYVDSDLSPTRAR
Ga0315289_107116133	3300032046	Sediment	MMNELLTTDVSATEPMDDAELEAIIGQDLTDAVSYVDSDLSPIRARGT
Ga0315905_101994866	3300032092	Freshwater	MIENINENLSTDIAAQEPMDDAELQSIITQDLVDAVSYVDSDLSPTRAKGT
Ga0315902_107830331	3300032093	Freshwater	MIENITENLSTDIAATEPMDDAELQSIITQDLTDAVS
Ga0315903_102206751	3300032116	Freshwater	MIENITDNLSTDIAATEPMDDAELQAIITQDLTDAVSYVDSDLSPTRAKGTEYYR
Ga0315286_110434213	3300032342	Sediment	MMNELPNTDVSAIEPMDDTELEAIIGQDLTDAVSYVDSDLSPIRARGTEY
Ga0315275_119047982	3300032401	Sediment	MMNELPNTDVSAIEPMDDTELEAIIGQDLTDAVSYVDSDLSPIRARGTEYYRGD
Ga0334722_112708241	3300033233	Sediment	MNEKITTDIAATEPMDDAELQAIITQDLTDAVSYVDSDLSPTRARG
Ga0334982_0169399_1_153	3300033981	Freshwater	MIENITDNLSTDIAAKQPMDEMELQAIITQDLTDAVSYVDSDLSPTRAKGT
Ga0335003_0027560_2_142	3300033995	Freshwater	MIENITENLSTDIAATEPMDDAELQAIITQDLTDAVSYVDSDLSPTR
Ga0335019_0551458_3_158	3300034066	Freshwater	MNMNDIPLSVDMAAPEPMDDAELQSIINGELTDAVSYIDSDISPIRAKGTEY
Ga0335010_0650224_3_140	3300034092	Freshwater	MNDIENLSTDIAAKEPMDDAELQAIVTQDLTDAVSYVDSDLSPTRA
Ga0335036_0247131_1_111	3300034106	Freshwater	MIENITDNLSTDIAAQTPMDDAELQAIITQDLTDAIS
Ga0335033_0394615_3_158	3300034117	Freshwater	MNPNDMPISVDVAAPEAMDDAELESIVNGELTDAVSYIDTDISPIRAKGTEY
Ga0335053_0526719_2_163	3300034118	Freshwater	MNMNDIPLSVDMAAPEPMDDAELQSIINGELTDAVSYIDSDISPIRAKGTEYYR
Ga0335049_0779516_1_156	3300034272	Freshwater	MNEQDITNVINTDIVAAKPMDDAELESIIGQDLTDAVSYVDSDLSPTRAKGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065772

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences