Metagenome / Metatranscriptome Family F065776

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065776
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	46 residues
Representative Sequence	MPGYLTNRYITLNPAADVAEAEADITALETRVTEAEANIDDLSLNIGV
Number of Associated Samples	72
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	34.65 %
% of genes from short scaffolds (< 2000 bps)	70.08 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (45.669 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton (19.685 % of family members)
Environment Ontology (ENVO)	Unclassified (49.606 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (61.417 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.42% β-sheet: 0.00% Coil/Unstructured: 56.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF13385	Laminin_G_3	3.97
PF02839	CBM_5_12	3.97
PF04820	Trp_halogenase	3.97
PF01050	MannoseP_isomer	3.17
PF13578	Methyltransf_24	2.38
PF13661	2OG-FeII_Oxy_4	0.79
PF04165	DUF401	0.79
PF13759	2OG-FeII_Oxy_5	0.79
PF13640	2OG-FeII_Oxy_3	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1906	Predicted GntP-related membrane permease AF0261, DUF401 family	General function prediction only [R]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.06 %
Unclassified	root	N/A	40.94 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	51.18 %
Unclassified	root	N/A	40.94 %
cellular organisms	root	All Organisms → cellular organisms	7.87 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	45.67 %
Unclassified	root	N/A	40.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.72 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.79 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	45.67 %
Unclassified	root	N/A	40.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.72 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.79 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	45.67 %
Unclassified	root	N/A	40.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.36 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	0.79 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	45.67 %
Unclassified	root	N/A	40.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.79 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	40.94 %
Unclassified	root	N/A	40.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.36 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.57 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.79 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.79 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.79 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	40.94 %
Unclassified	root	N/A	40.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.36 %
Namakavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Namakavirus	0.79 %
Lake Baikal phage Baikal-20-5m-C28	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	0.79 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.79 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.79 %
Shandvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Shandvirus	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.79 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	40.94 %
Unclassified	root	N/A	40.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.36 %
unclassified Magnetospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum	0.79 %
Eurybiavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Eurybiavirus	0.79 %
Namakavirus smbcm6	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Namakavirus → Namakavirus smbcm6	0.79 %
Lake Baikal phage Baikal-20-5m-C28	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	0.79 %
Shandvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Shandvirus	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.79 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	40.94 %
Unclassified	root	N/A	40.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.36 %
unclassified Eurybiavirus	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Eurybiavirus → unclassified Eurybiavirus	0.79 %
Magnetospirillum sp. 15-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. 15-1	0.79 %
Namakavirus smbcm6	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Namakavirus → Namakavirus smbcm6	0.79 %
Lake Baikal phage Baikal-20-5m-C28	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	0.79 %
Shandvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Shandvirus	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.79 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	40.94 %
Unclassified	root	N/A	40.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.36 %
Eurybiavirus sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Eurybiavirus → unclassified Eurybiavirus → Eurybiavirus sp.	0.79 %
Magnetospirillum sp. 15-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. 15-1	0.79 %
Namakavirus smbcm6	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Namakavirus → Namakavirus smbcm6	0.79 %
Lake Baikal phage Baikal-20-5m-C28	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	0.79 %
Shandvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Shandvirus	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002835\|B570J40625_100205714	All Organisms → Viruses → Predicted Viral	2124	Open in IMG/M
3300004112\|Ga0065166_10067280	Not Available	1234	Open in IMG/M
3300004112\|Ga0065166_10146311	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	899	Open in IMG/M
3300004240\|Ga0007787_10406645	Not Available	678	Open in IMG/M
3300005517\|Ga0070374_10039284	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	2457	Open in IMG/M
3300005525\|Ga0068877_10076017	All Organisms → Viruses → Predicted Viral	2151	Open in IMG/M
3300005527\|Ga0068876_10111029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1630	Open in IMG/M
3300005527\|Ga0068876_10642247	Not Available	571	Open in IMG/M
3300005527\|Ga0068876_10658520	Not Available	563	Open in IMG/M
3300005527\|Ga0068876_10689882	Not Available	546	Open in IMG/M
3300005528\|Ga0068872_10042427	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2889	Open in IMG/M
3300005528\|Ga0068872_10197384	Not Available	1150	Open in IMG/M
3300005581\|Ga0049081_10178425	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	768	Open in IMG/M
3300005582\|Ga0049080_10179928	Not Available	702	Open in IMG/M
3300005662\|Ga0078894_10221916	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300005662\|Ga0078894_10374294	All Organisms → cellular organisms → Bacteria → Proteobacteria	1289	Open in IMG/M
3300005662\|Ga0078894_10608671	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	972	Open in IMG/M
3300005662\|Ga0078894_11505884	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	558	Open in IMG/M
3300005805\|Ga0079957_1194473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	984	Open in IMG/M
3300005805\|Ga0079957_1324056	Not Available	684	Open in IMG/M
3300006484\|Ga0070744_10091201	Not Available	882	Open in IMG/M
3300006639\|Ga0079301_1128572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	760	Open in IMG/M
3300007708\|Ga0102859_1127945	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	739	Open in IMG/M
3300008107\|Ga0114340_1007889	Not Available	6294	Open in IMG/M
3300008107\|Ga0114340_1009638	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4851	Open in IMG/M
3300008107\|Ga0114340_1021884	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4253	Open in IMG/M
3300008107\|Ga0114340_1069558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1485	Open in IMG/M
3300008107\|Ga0114340_1116024	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1044	Open in IMG/M
3300008107\|Ga0114340_1123438	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	998	Open in IMG/M
3300008110\|Ga0114343_1012899	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3955	Open in IMG/M
3300008110\|Ga0114343_1089712	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1086	Open in IMG/M
3300008110\|Ga0114343_1135914	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	803	Open in IMG/M
3300008110\|Ga0114343_1136998	Not Available	799	Open in IMG/M
3300008113\|Ga0114346_1036988	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2522	Open in IMG/M
3300008114\|Ga0114347_1033777	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2293	Open in IMG/M
3300008116\|Ga0114350_1007254	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5236	Open in IMG/M
3300008116\|Ga0114350_1050630	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	1512	Open in IMG/M
3300008116\|Ga0114350_1098765	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	927	Open in IMG/M
3300008120\|Ga0114355_1023399	Not Available	3201	Open in IMG/M
3300008120\|Ga0114355_1034890	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2454	Open in IMG/M
3300008120\|Ga0114355_1087895	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Shandvirus	1260	Open in IMG/M
3300008120\|Ga0114355_1126100	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	953	Open in IMG/M
3300008258\|Ga0114840_1049436	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	666	Open in IMG/M
3300008258\|Ga0114840_1049436	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	666	Open in IMG/M
3300008258\|Ga0114840_1075361	Not Available	510	Open in IMG/M
3300008259\|Ga0114841_1045337	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2171	Open in IMG/M
3300008266\|Ga0114363_1029148	All Organisms → cellular organisms → Bacteria	5171	Open in IMG/M
3300008448\|Ga0114876_1107918	Not Available	1094	Open in IMG/M
3300009159\|Ga0114978_10012672	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6433	Open in IMG/M
3300009159\|Ga0114978_10227844	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1166	Open in IMG/M
3300009164\|Ga0114975_10412469	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	736	Open in IMG/M
3300009419\|Ga0114982_1067135	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1119	Open in IMG/M
3300009419\|Ga0114982_1103541	Not Available	879	Open in IMG/M
3300010354\|Ga0129333_11250726	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	615	Open in IMG/M
3300010354\|Ga0129333_11602424	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	531	Open in IMG/M
3300010370\|Ga0129336_10209172	Not Available	1107	Open in IMG/M
3300010370\|Ga0129336_10350729	Not Available	812	Open in IMG/M
3300010885\|Ga0133913_11392325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. 15-1	1785	Open in IMG/M
3300012709\|Ga0157608_1098688	Not Available	501	Open in IMG/M
3300012716\|Ga0157605_1160451	Not Available	579	Open in IMG/M
3300012731\|Ga0157616_1057791	Not Available	690	Open in IMG/M
3300013004\|Ga0164293_10072923	Not Available	2699	Open in IMG/M
3300013005\|Ga0164292_10066425	Not Available	2791	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10108574	Not Available	1931	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10335337	Not Available	962	Open in IMG/M
3300017788\|Ga0169931_10413366	Not Available	991	Open in IMG/M
3300017788\|Ga0169931_10607592	Not Available	741	Open in IMG/M
3300020048\|Ga0207193_1050695	All Organisms → Viruses	4353	Open in IMG/M
3300020048\|Ga0207193_1637270	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Namakavirus → Namakavirus smbcm6	708	Open in IMG/M
3300020074\|Ga0194113_10854922	Not Available	618	Open in IMG/M
3300020160\|Ga0211733_10130221	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1488	Open in IMG/M
3300020172\|Ga0211729_11351817	Not Available	809	Open in IMG/M
3300020183\|Ga0194115_10100242	Not Available	1622	Open in IMG/M
3300020498\|Ga0208050_1015788	Not Available	806	Open in IMG/M
3300020519\|Ga0208223_1004407	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2606	Open in IMG/M
3300020551\|Ga0208360_1035561	Not Available	641	Open in IMG/M
3300021091\|Ga0194133_10335440	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	885	Open in IMG/M
3300021376\|Ga0194130_10034366	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3885	Open in IMG/M
3300022752\|Ga0214917_10006055	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12702	Open in IMG/M
3300022752\|Ga0214917_10006356	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12292	Open in IMG/M
3300022752\|Ga0214917_10028296	All Organisms → Viruses → Predicted Viral	4295	Open in IMG/M
3300027697\|Ga0209033_1177402	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	649	Open in IMG/M
3300027710\|Ga0209599_10076660	Not Available	877	Open in IMG/M
3300027782\|Ga0209500_10002388	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13372	Open in IMG/M
3300027793\|Ga0209972_10017794	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4451	Open in IMG/M
3300027793\|Ga0209972_10372648	Not Available	612	Open in IMG/M
3300027793\|Ga0209972_10467130	Not Available	524	Open in IMG/M
3300027797\|Ga0209107_10064698	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Eurybiavirus → unclassified Eurybiavirus → Eurybiavirus sp.	2031	Open in IMG/M
3300027816\|Ga0209990_10243765	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	820	Open in IMG/M
3300028025\|Ga0247723_1001281	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	15005	Open in IMG/M
3300028025\|Ga0247723_1005550	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5663	Open in IMG/M
3300028025\|Ga0247723_1121295	Not Available	638	Open in IMG/M
3300028025\|Ga0247723_1136290	Not Available	586	Open in IMG/M
3300031758\|Ga0315907_10025960	Not Available	5353	Open in IMG/M
3300031787\|Ga0315900_11056772	Not Available	527	Open in IMG/M
3300031857\|Ga0315909_10015221	Not Available	7906	Open in IMG/M
3300031857\|Ga0315909_10027104	Not Available	5633	Open in IMG/M
3300031857\|Ga0315909_10089728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2684	Open in IMG/M
3300031857\|Ga0315909_10289643	Not Available	1231	Open in IMG/M
3300031857\|Ga0315909_10499698	Not Available	840	Open in IMG/M
3300031857\|Ga0315909_10616771	Not Available	721	Open in IMG/M
3300031951\|Ga0315904_10125421	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2648	Open in IMG/M
3300031951\|Ga0315904_10238083	All Organisms → Viruses → Predicted Viral	1753	Open in IMG/M
3300031951\|Ga0315904_10266337	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1629	Open in IMG/M
3300031951\|Ga0315904_10853076	Not Available	742	Open in IMG/M
3300031963\|Ga0315901_10182873	All Organisms → Viruses → Predicted Viral	1833	Open in IMG/M
3300031963\|Ga0315901_10344397	Not Available	1216	Open in IMG/M
3300031963\|Ga0315901_10459741	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1003	Open in IMG/M
3300031963\|Ga0315901_10707009	Not Available	746	Open in IMG/M
3300032050\|Ga0315906_10475607	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1064	Open in IMG/M
3300032093\|Ga0315902_10297410	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1530	Open in IMG/M
3300032093\|Ga0315902_10500478	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1057	Open in IMG/M
3300032116\|Ga0315903_10029045	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5946	Open in IMG/M
3300032116\|Ga0315903_10190264	All Organisms → Viruses → Predicted Viral	1835	Open in IMG/M
3300032116\|Ga0315903_10620689	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	825	Open in IMG/M
3300032116\|Ga0315903_11165576	Not Available	523	Open in IMG/M
3300033996\|Ga0334979_0511120	Not Available	649	Open in IMG/M
3300034066\|Ga0335019_0174665	Not Available	1402	Open in IMG/M
3300034066\|Ga0335019_0465536	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	761	Open in IMG/M
3300034071\|Ga0335028_0028208	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3883	Open in IMG/M
3300034071\|Ga0335028_0722574	Not Available	519	Open in IMG/M
3300034101\|Ga0335027_0025290	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4997	Open in IMG/M
3300034112\|Ga0335066_0723305	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	500	Open in IMG/M
3300034117\|Ga0335033_0604165	Not Available	510	Open in IMG/M
3300034122\|Ga0335060_0211208	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1099	Open in IMG/M
3300034272\|Ga0335049_0122334	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1881	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	93.70%
Terrestrial	Environmental → Terrestrial	6.30%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	88.98%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	6.30%
Marine	Environmental → Aquatic → Marine	4.72%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	49.61%
Lentic	Environmental → Aquatic → Freshwater → Lentic	21.26%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	18.11%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	6.30%
Coastal	Environmental → Aquatic → Marine → Coastal	3.15%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	48.03%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	18.11%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	17.32%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	6.30%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.15%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.15%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.57%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.79%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	19.68%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	18.11%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	17.32%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	15.75%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.15%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.15%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	3.15%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	3.15%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.94%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.94%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.57%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.57%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	1.57%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	1.57%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.79%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.79%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008114	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008258	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012709	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES134 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012716	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES130 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012731	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES145 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300017788	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020183	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surface	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020519	Freshwater microbial communities from Lake Mendota, WI - 07OCT2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020551	Freshwater microbial communities from Lake Mendota, WI - 27JUL2010 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300021091	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40m	Environmental	Open in IMG/M
3300021376	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surface	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300027697	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J40625_1002057141	3300002835	Freshwater	MPGYLTNRYITLNPAADVQTVTTSVTTLASRVTEAEANIDDLSLNIGV*
Ga0065166_100672802	3300004112	Freshwater Lake	MPGYLTNRYVSFNPASSADLESAQTDIDSLENRVTEAEANIDDLSLNIGV*
Ga0065166_101463111	3300004112	Freshwater Lake	MPGYLTNRYITLNPAADVQTVTTSVTALASRVTEAESSIDDLSLNIGV*
Ga0007787_104066453	3300004240	Freshwater Lake	MPGYLSNRLISLNPAQDVATVESSVTALTTRVTEAEANIDDL
Ga0070374_100392843	3300005517	Freshwater Lake	MPGYLTNRYITLNPAADVQTVATSVTTLASRVTEAESSIDDLSLNIGV*
Ga0068877_100760174	3300005525	Freshwater Lake	MPGYLSNRLISLNPAQDVAAVESDVTALTTRVTEAEANIDDLSLNIGV*
Ga0068876_101110292	3300005527	Freshwater Lake	MPGYLTNRYITLNPAADVAEAEADITALETRVTEAEANIDDLSLNIGV*
Ga0068876_106422471	3300005527	Freshwater Lake	MPGYLTNRYITLNPAADIQTVTTSVTTLASRVTEAESSIDDLSLNIG
Ga0068876_106585202	3300005527	Freshwater Lake	MPGYLTNRYISLNPAADVAAVESDLDSLETRVTEAEANIDDLSLNLGV*
Ga0068876_106898822	3300005527	Freshwater Lake	MPGYLSNRYITFDPAQDVAEVAGDITALEIRVTEAEGNIDDLSLNIGV*
Ga0068872_100424272	3300005528	Freshwater Lake	MPGYLTNRYITLNPAADVQTVATSVTTLASRVTEAEAGIDDLSLNIGV*
Ga0068872_101973841	3300005528	Freshwater Lake	MPGYLSNRRISFDPTQAVEDLDTDLTAIEARVTEAEA
Ga0049081_101784252	3300005581	Freshwater Lentic	MPGYLTNRYITLNPAADVQTVTTSVTTLASRVTEAESSIDDLSLNIGV*
Ga0049080_101799282	3300005582	Freshwater Lentic	MPGYLTNRYITLNPAADVQTVTTSVTTLASRVTEAEASIDDLSLNIGV*
Ga0078894_102219162	3300005662	Freshwater Lake	MPGYLTNRYITLNPAADVQTVTTSVTSLASRVTEAEANIDDLSLNIGV*
Ga0078894_103742942	3300005662	Freshwater Lake	MPGYLSNRLISINPAQDLAAVESDLTALDARVTEAEANIDDISLNIGV*
Ga0078894_106086711	3300005662	Freshwater Lake	MPGYLTNRYITLNPAADVQTVTTSVTALASRVTEAEASIDDLSLNIGV*
Ga0078894_115058842	3300005662	Freshwater Lake	MPGYLTNRYITLNPAADIQTVTTSVTALASRVTEAESSIDDLSLNIGV*
Ga0079957_11944732	3300005805	Lake	PGYLTNRYIALNPAADVAEAEADITALETRVTEAEANIDDLSLNIGV*
Ga0079957_13240562	3300005805	Lake	MPGYLSNRLISLNPAQDVAAVESDLTALDTRVTEAEANIDDLSLNIGV*
Ga0070744_100912012	3300006484	Estuarine	MPGYLTNRYITLNPAADVQTVTTSVATLASRVTEAESSIDDLSLNIGV*
Ga0079301_11285722	3300006639	Deep Subsurface	PGYLTNRYITLNPAADVAEAEADITALETRVTEAEANIDDLSLNIGV*
Ga0102859_11279452	3300007708	Estuarine	PGYLTNRYITLNPAADVQTVATSVTTLASRVTEAESSIDDLSLNIGV*
Ga0114340_10078895	3300008107	Freshwater, Plankton	MPGYLSNRRISFDPTQEVADLDTDLTAVEARVTEAEANIDDLSLNIGV*
Ga0114340_10096386	3300008107	Freshwater, Plankton	MPGYLTNRYITLNPAADVQTVATSVTTLASRVTEAEASIDDLSLNIGV*
Ga0114340_10218846	3300008107	Freshwater, Plankton	MPGYLTNRYITLNPVADIQTVTTSVTALASRVTEAEASIDDLSLNIGV*
Ga0114340_10695583	3300008107	Freshwater, Plankton	MPGYLTNRYISLNPAADVAAVESDLDSLETRVTEAEANIDDLSLNIGV*
Ga0114340_11160242	3300008107	Freshwater, Plankton	MPGYLSNRRISFDPTQEVADLDTDLTAVEARVTEAEANIDDLSLNLGV*
Ga0114340_11234382	3300008107	Freshwater, Plankton	MPGYLSNRRISFDPTQEVADLDTDLTAIEARVTEAEANIDDLSLNIGV*
Ga0114343_10128995	3300008110	Freshwater, Plankton	RRISFDPTQEVADLDTDLTAVEARVTEAEANIDDLSLNIGV*
Ga0114343_10897121	3300008110	Freshwater, Plankton	RRISFDPTQEVADLDTDLTAVEARVTEAEANIDDLSLNLGV*
Ga0114343_11359142	3300008110	Freshwater, Plankton	MPGYLSNRRISFDPTQAVEDLDTDLTAIEARVTEAEANIDDLSLNLGV*
Ga0114343_11369981	3300008110	Freshwater, Plankton	MPGYLSNRYITFDPAQDVAEVAGDITALEIRVTEAEGNID
Ga0114346_10369884	3300008113	Freshwater, Plankton	MGYNNYMPGYLSNRLISLNPAQDVAAVESDITALTTRVTEAEANIDDLSLNIGV*
Ga0114347_10337773	3300008114	Freshwater, Plankton	MPGYLSNRLISLNPAQDVAAVESDVTALTTRVTEAEGNIDDLSLNIGV*
Ga0114350_10072548	3300008116	Freshwater, Plankton	MPGYLSNRYITFDPAQDVAEVAGDITALETRVTEAEANIDDLSLNIGV*
Ga0114350_10506301	3300008116	Freshwater, Plankton	MPGYLTNRYISLNPAADVAAVESDLDSLENRVTEAEANIDDLSLNIGV*
Ga0114350_10987651	3300008116	Freshwater, Plankton	MPGYLSNRLISLNPAQDVAAVESDVTALTTRVTEAEANID
Ga0114355_10233991	3300008120	Freshwater, Plankton	MPGYLSNRRISFDPTQAVEDLDTDLTAIEARVTEAEANIDDLSLNIGV*
Ga0114355_10282061	3300008120	Freshwater, Plankton	MPGYLSNRYITFDPAQDVAEVAGDITALEIRVTEAEGNI
Ga0114355_10348902	3300008120	Freshwater, Plankton	MPGYLTNRYVSYNPAADFEAVQTDVSALDVRVTEAEANIDDLSLNLGV*
Ga0114355_10878952	3300008120	Freshwater, Plankton	MGYNNYMPGYLSNRYITFDPAQDVAEVAGDITALEIRVTEAEGNIDDLSLNIGV*
Ga0114355_11261001	3300008120	Freshwater, Plankton	MPGYLSNRLISFNPAQDVAAVESDVTALTTRVTEAEANIDDLSLNIGV
Ga0114840_10494361	3300008258	Freshwater, Plankton	MPGYLSNRLISLNPAQDVAAVESDVTALTTRVTEAEANIDDLSLNI
Ga0114840_10494363	3300008258	Freshwater, Plankton	ISLNPAQDVAAVESDVTALTTRVTEAEANIDDLSLNIVEKKNIEI*
Ga0114840_10753611	3300008258	Freshwater, Plankton	ISLNPAQDVAAVESDVTALTTRVTEAEANIDDLSLNIGV*
Ga0114841_10453373	3300008259	Freshwater, Plankton	MPGYLTKRYITLNPAADIQTVTTSVTTLASRVTEAEASIDDLSLNIGV*
Ga0114363_10291486	3300008266	Freshwater, Plankton	MPGYSTNRYITLNPAADVQTVATSVTTLASRVTEAESSIDDLSLNIGV*
Ga0114876_11079181	3300008448	Freshwater Lake	MPGYLSNRRISFDPTQAVEDLDTDLTAIEARVTEAEANIDD
Ga0114978_100126729	3300009159	Freshwater Lake	MPGYLTNRYITLNPAADVQTVSTSVTTLASRVTEAESSIDDLSLNIGV*
Ga0114978_102278443	3300009159	Freshwater Lake	MPGYLTNRYITLNPAADVQTVTTSVTTLASRVTEAEASIDDLSLNLGV*
Ga0114975_104124691	3300009164	Freshwater Lake	MPGYLTNRYITLNPAADVQTVTTSVATLASRVTEA
Ga0114982_10671352	3300009419	Deep Subsurface	MPGYLTNRYITLNPAADVAEAEADITSLETRVTEAEANIDDLSLNIGV*
Ga0114982_11035412	3300009419	Deep Subsurface	MPGYLSNRYITFDPAQDVAEVAGDITALEIRVTEAEANIDDLSLNIGV*
Ga0129333_112507261	3300010354	Freshwater To Marine Saline Gradient	MPGYLTNRFINLNPAADVAETEADVAALETRVTEAEVNID
Ga0129333_116024242	3300010354	Freshwater To Marine Saline Gradient	MPGYLTNRYISLNPAADVAAVESDLDSLETRVTEAE
Ga0129336_102091721	3300010370	Freshwater To Marine Saline Gradient	MPGYLTNRYITLNPAADVAAVESDLDSLETRVTEAEANIDDLSLN
Ga0129336_103507291	3300010370	Freshwater To Marine Saline Gradient	LNPAADVAAVESDLDSLETRVTEAEANIDDLSLNIGV*
Ga0133913_113923252	3300010885	Freshwater Lake	MPGYLTNRYINLNPSVDIQTVSTSVTTLASRVTEAEANIDDLSLNIGV*
Ga0157608_10986881	3300012709	Freshwater	NRYITLNPAADVAEAEADITALETRVTEAEANIDDLSLNIGV*
Ga0157605_11604512	3300012716	Freshwater	MPGYLTNRYITLNPASDVAEAEADITALENRVTEAEANIDDLSLNIGV*
Ga0157616_10577912	3300012731	Freshwater	YITLNPAADVQTVATSVTTLASRVTEAESSIDDLSLNIGV*
Ga0164293_100729231	3300013004	Freshwater	MPGYLTNRYITLNPASDVAEAEADITALETRVTEAEANIDDLSLNIGV*
Ga0164292_100664252	3300013005	Freshwater	MPGYLTNRYITLNPAADVQTVSTSVTSLASRVTEAEANIDDLSLNIGV*
(restricted) Ga0172367_101085742	3300013126	Freshwater	MPGYLSNRLISLNPAQDVAEVAEDITALETRVTEAEANIDDLSLNIGV*
(restricted) Ga0172373_103353373	3300013131	Freshwater	MPGYLSNRLISLNPAQDVAEVAGDITALETRVTEAEANIDDLSLNIGV*
Ga0169931_104133662	3300017788	Freshwater	MPGYLSNRLISLNPAQDVAEVAGDITALETRVTEAEANIDDLSLNIGV
Ga0169931_106075922	3300017788	Freshwater	LNPAQDVAEVAGDITALETRVTEAEANIDDLSLNIGV
Ga0207193_10506955	3300020048	Freshwater Lake Sediment	MPGYLSNRRISFDPTQAVEDLDVDLTAVAARVTEAESNIDDLSLNIGV
Ga0207193_16372701	3300020048	Freshwater Lake Sediment	MPGYLTNRYITLNPAADVQTVTTSVTALASRVTEAESSIDDLSLNIGV
Ga0194113_108549221	3300020074	Freshwater Lake	MPGYLSNRLISLNPAQDVAEVAEDITSLETRVTEAEANIDDLSLNIGV
Ga0211733_101302211	3300020160	Freshwater	MPGYLTNRYITLNPAADVQTVSTSVTTLASRVTEAEANIDDLSLNIGV
Ga0211729_113518172	3300020172	Freshwater	MPGYLTNRYISLNPAADTQSVATSVTTLASRVTEAETNIDDLSLN
Ga0194115_101002422	3300020183	Freshwater Lake	MPGYLSNRLISLNPAQDVAEVAEDVTALETRVTEAEANIDDLSLNIGV
Ga0208050_10157882	3300020498	Freshwater	MPGYLTNRYITLNPAADVQTVTTSVTTLASRVTEAEANIDDLSLNIGV
Ga0208223_10044072	3300020519	Freshwater	MPGYLTNRYITLNPAADVQTVATSVTTLASRVTEAESSIDDLSLNIGV
Ga0208360_10355611	3300020551	Freshwater	LTNRYITLNPAADVAEAEADITALETRVTEAEANIDDLSLNIGV
Ga0194133_103354402	3300021091	Freshwater Lake	ISLNPAQDVAEVAEDITSLETRVTEAEANIDDLSLNIGV
Ga0194130_100343662	3300021376	Freshwater Lake	MPGYLSNRLISLNPAQDVAEVAEDITALETRVTEAEANIDDLSLNIGV
Ga0214917_1000605510	3300022752	Freshwater	MPGYLSNRLISLNPAQDVAAVESSVTALSTRVTEAEANIDDLSLNIGV
Ga0214917_100063564	3300022752	Freshwater	MPGYLSNRLISLNPAQDVAAVESDLTALDTRVTEAEANIDDLSLNIGV
Ga0214917_100282962	3300022752	Freshwater	MPGYLTNRYITLNPAADVAEAEADITALETRVTEAEANIDDLSLNIGV
Ga0209033_11774022	3300027697	Freshwater Lake	MPGYLSNRRISFDPTQEVADLDTDLTAIETRVTEAEANIDDLSLNIGV
Ga0209599_100766602	3300027710	Deep Subsurface	MPGYLSNRYITFDPAQDVAEVAGDITALEIRVTEAEANIDDLSLNIGV
Ga0209500_1000238816	3300027782	Freshwater Lake	MPGYLTNRYITLNPAADVQTVSTSVTTLASRVTEAESSIDDLSLNIGV
Ga0209972_100177945	3300027793	Freshwater Lake	MPGYLTNRYITLNPAADVQTVATSVTTLASRVTEAEAGIDDLSLNIGV
Ga0209972_103726482	3300027793	Freshwater Lake	DPAQDVAEVAGDITALEIRVTEAEANIDDLSLNIGV
Ga0209972_104671301	3300027793	Freshwater Lake	NNYMPGYLTNRYISLNPAADVAAVESDLDSLENRVTEAEANIDDLSLNIGV
Ga0209107_100646982	3300027797	Freshwater And Sediment	MPGYLTNRYITLNPAADVQTVTTSVTTLASRVTEAEASIDDLSLNIGV
Ga0209990_102437652	3300027816	Freshwater Lake	MPGYLTNRYISLNPAADVAAVESDLDSLETRVTEAEANIDDLSLNLGV
Ga0247723_100128112	3300028025	Deep Subsurface Sediment	MPGYLTNRFITLNPAADVAEAEANITALETRVTEAEANIDDLSLNIGV
Ga0247723_10055502	3300028025	Deep Subsurface Sediment	MPGYLSNRYITFDPAQDVEEVAGDIAALETRVTEAEANIDDLSLNIGV
Ga0247723_11212951	3300028025	Deep Subsurface Sediment	MPGYLTNRYITLNPAADVQTVTTSVATLASRVTEAEASI
Ga0247723_11362902	3300028025	Deep Subsurface Sediment	MPGYLTNRYITLNPAADIQTVTTSVTALASRVTEAEASIDDLSLNIGV
Ga0315907_100259607	3300031758	Freshwater	MPGYLSNRRISFDPTQEVADLDTDLTAVEARVTEAEANIDDLSLNIGV
Ga0315900_110567722	3300031787	Freshwater	MPGYLTNRYISLNPAADVAAVESDLDSLENRVTEAEANIDDLSLNIGV
Ga0315909_100152211	3300031857	Freshwater	MPGYLSNRRISFDPTQEVADLDTDLTAVEARVTEAEANIDDLSLNLGV
Ga0315909_100271047	3300031857	Freshwater	MPGYLSNRRISFDPTQAVEDLDTDLTAIEARVTEAEANIDDLSLNIGV
Ga0315909_100897283	3300031857	Freshwater	MPGYLTNRYITLNPAADVQTVATSVTTLASRVTEAE
Ga0315909_102896433	3300031857	Freshwater	MPGYLSNRYITFDPAQDVAEVAGDVIALEIRVTEAEANIDDLSLN
Ga0315909_104996982	3300031857	Freshwater	MPGYLSNRRISFDPTQEVADLDTDLTAIEARVTEAEANIDDL
Ga0315909_106167711	3300031857	Freshwater	MPGYLSNRYITFDPAQDVAEVAGDITALEIRVTEAEGNIDDISLNIGV
Ga0315904_101254211	3300031951	Freshwater	MPGYLTNRYISLNPAADVAAVESDLDSLETRVTEAEANIDDL
Ga0315904_102380834	3300031951	Freshwater	MPGYLTNRYITLNPAADVAEAEADITALETRVTEAEANIDDLSLNIG
Ga0315904_102663375	3300031951	Freshwater	MPGYLSNRYITFDPAQDVAEVAGDITALETRVTEAEANIDDL
Ga0315904_108530762	3300031951	Freshwater	MPGYLTNRYVSYNPAADFEAVQTDVSALDVRVTEAEANIDDLSLNLGV
Ga0315901_101828734	3300031963	Freshwater	MPGYLSNRLISLNPAQDVAAVESDVTALTTRVTEAEANIDDL
Ga0315901_103443973	3300031963	Freshwater	MPGYLTNRYISLNPAADVAAVESDLDSLETRVTEAEANIDDLSLNIGV
Ga0315901_104597411	3300031963	Freshwater	MPGYLSNRYITFDPAQDVAEVAGDITALETRVTEAEANIDDLSLNIGV
Ga0315901_107070091	3300031963	Freshwater	MPGYLSNRYITFDPAQDVAEVAGDVIALEIRVTEAEANIDDLSLNI
Ga0315906_104756071	3300032050	Freshwater	MPGYLSNRLISLNPAQDVAAVESDVTALTTRVTEAEANIDDLSLN
Ga0315902_102974102	3300032093	Freshwater	MPGYLTNRYITLNPAADIQTVTTSVTTLASRVTEAESSIDDLSLNIGV
Ga0315902_105004781	3300032093	Freshwater	MPGYLTNRYITLNPAADVAEAEADITALETRVTEAEAGIDDLSLNIGV
Ga0315903_100290452	3300032116	Freshwater	MPGYLSNRYITFDPAQDVAEVAGDITALEIRVTEAEGNIDDLSLNIGV
Ga0315903_101902641	3300032116	Freshwater	MPGYLSNRLISLNPAQDVAAVESDVTALTTRVTEAEANIDDLS
Ga0315903_106206891	3300032116	Freshwater	MPGYLTNRYISLNPAADVAAVESDLDSLENRVTEAEANIDDLSLNIG
Ga0315903_111655762	3300032116	Freshwater	MPGYLSNRLISLNPAQDVAAVESDITALEIRVTEAEGSIDDLSLNIGV
Ga0334979_0511120_321_467	3300033996	Freshwater	MPGYLTNRYITLNPAADVQTVSTSVTSLASRVTEAEANIDDLSLNIGV
Ga0335019_0174665_321_467	3300034066	Freshwater	MPGYLTNRYITLNPAADVAEAEADITALENRVTEAESSIDDLSLNIGV
Ga0335019_0465536_213_359	3300034066	Freshwater	MPGYLSNRRISFDPTQEVADLDTDLTAIETRVTEAESNIDDLSLNIGV
Ga0335028_0028208_3449_3595	3300034071	Freshwater	MPGYLSNRLISINPAQDLAAVESDLTALDARVTEAEANIDDLSLNIGV
Ga0335028_0722574_3_122	3300034071	Freshwater	MPGYLSNRYITFDPAQDLAEVSEDITALETRVTEAEANID
Ga0335027_0025290_1512_1658	3300034101	Freshwater	VPGYLTNRFITLNPAADVAEAEADITALETRVTEAEANIDDLSLNIGV
Ga0335066_0723305_2_127	3300034112	Freshwater	MPGYLTNRYITLNPAADIQTVTTSVTTLASRVTEAEANIDDL
Ga0335033_0604165_374_508	3300034117	Freshwater	LTNRYITLNPAADVQTVTTSVTTLASRVTEAEANIDDLSLNIGV
Ga0335060_0211208_619_765	3300034122	Freshwater	MPGYLTNRYISLNPAADVAEAEADITALETRVTEAEANIDDLSLNIGV
Ga0335049_0122334_476_622	3300034272	Freshwater	MPGYLTNRYITLNPAADVAEAEADITALETRVTEAEASIDDLSLNIGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters