NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F065824

Metagenome Family F065824

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065824
Family Type Metagenome
Number of Sequences 127
Average Sequence Length 43 residues
Representative Sequence MNRNKHLALAALGFFLTGCTGMTKNQAALVGAATCGAMGAA
Number of Associated Samples 119
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 89.76 %
% of genes from short scaffolds (< 2000 bps) 77.95 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (52.756 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(12.598 % of family members)
Environment Ontology (ENVO) Unclassified
(28.346 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(36.220 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 49.28%    β-sheet: 0.00%    Coil/Unstructured: 50.72%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF01741MscL 18.11
PF00196GerE 13.39
PF01435Peptidase_M48 8.66
PF08239SH3_3 2.36
PF04357TamB 1.57
PF01464SLT 1.57
PF07730HisKA_3 0.79
PF01040UbiA 0.79
PF03160Calx-beta 0.79
PF02954HTH_8 0.79
PF12836HHH_3 0.79
PF00722Glyco_hydro_16 0.79
PF02518HATPase_c 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG1970Large-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 18.11
COG2911Phospholipid transport to the outer membrane protein TamBCell wall/membrane/envelope biogenesis [M] 1.57
COG2273Beta-glucanase, GH16 familyCarbohydrate transport and metabolism [G] 0.79
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.79
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.79
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.79
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.79


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms52.76 %
UnclassifiedrootN/A47.24 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000443|F12B_12116765All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium869Open in IMG/M
3300000655|AF_2010_repII_A100DRAFT_1077822Not Available583Open in IMG/M
3300000787|JGI11643J11755_11028101Not Available628Open in IMG/M
3300000787|JGI11643J11755_11666124All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1791Open in IMG/M
3300000789|JGI1027J11758_12430674All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium672Open in IMG/M
3300000858|JGI10213J12805_10040725Not Available538Open in IMG/M
3300000890|JGI11643J12802_10972070All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium569Open in IMG/M
3300000955|JGI1027J12803_102549983All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300000956|JGI10216J12902_103543450All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300002124|C687J26631_10241140Not Available599Open in IMG/M
3300003890|Ga0063162_1070900All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium609Open in IMG/M
3300003987|Ga0055471_10205398All Organisms → cellular organisms → Bacteria → Proteobacteria616Open in IMG/M
3300003994|Ga0055435_10188627Not Available589Open in IMG/M
3300004071|Ga0055486_10032323Not Available969Open in IMG/M
3300004157|Ga0062590_102185631Not Available579Open in IMG/M
3300004479|Ga0062595_101733830Not Available590Open in IMG/M
3300004480|Ga0062592_101254533Not Available696Open in IMG/M
3300005172|Ga0066683_10465952All Organisms → cellular organisms → Bacteria → Proteobacteria773Open in IMG/M
3300005172|Ga0066683_10566135All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300005366|Ga0070659_100167257All Organisms → cellular organisms → Bacteria → Proteobacteria1800Open in IMG/M
3300005526|Ga0073909_10011333All Organisms → cellular organisms → Bacteria2730Open in IMG/M
3300005549|Ga0070704_100607632All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300005556|Ga0066707_10079550All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1974Open in IMG/M
3300005564|Ga0070664_100548621Not Available1069Open in IMG/M
3300005713|Ga0066905_102061410All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300005719|Ga0068861_101967064Not Available583Open in IMG/M
3300005841|Ga0068863_100308477All Organisms → cellular organisms → Bacteria → Proteobacteria1536Open in IMG/M
3300006049|Ga0075417_10378266All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300006358|Ga0068871_101305837Not Available682Open in IMG/M
3300006358|Ga0068871_101425670Not Available653Open in IMG/M
3300006844|Ga0075428_102465227All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium533Open in IMG/M
3300006845|Ga0075421_102179472Not Available585Open in IMG/M
3300006845|Ga0075421_102234693Not Available577Open in IMG/M
3300006846|Ga0075430_100496208All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1007Open in IMG/M
3300006852|Ga0075433_10260174All Organisms → cellular organisms → Bacteria1538Open in IMG/M
3300006871|Ga0075434_100552797Not Available1171Open in IMG/M
3300006880|Ga0075429_101885927All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300006894|Ga0079215_10665924Not Available695Open in IMG/M
3300006903|Ga0075426_11460886Not Available520Open in IMG/M
3300006914|Ga0075436_100398416Not Available997Open in IMG/M
3300007004|Ga0079218_13642023All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium523Open in IMG/M
3300007076|Ga0075435_101205250All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium662Open in IMG/M
3300009012|Ga0066710_100358988Not Available2157Open in IMG/M
3300009094|Ga0111539_10113696All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3175Open in IMG/M
3300009156|Ga0111538_14120908All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300009176|Ga0105242_10114848All Organisms → cellular organisms → Bacteria2301Open in IMG/M
3300010047|Ga0126382_10424633All Organisms → cellular organisms → Bacteria1045Open in IMG/M
3300010047|Ga0126382_11252622All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300010323|Ga0134086_10022426All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2032Open in IMG/M
3300010335|Ga0134063_10155382All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300010362|Ga0126377_10115994All Organisms → cellular organisms → Bacteria2467Open in IMG/M
3300010375|Ga0105239_12971493All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300010396|Ga0134126_11745457Not Available683Open in IMG/M
3300010400|Ga0134122_10318070Not Available1343Open in IMG/M
3300010400|Ga0134122_11618161All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300011438|Ga0137451_1098510Not Available890Open in IMG/M
3300011444|Ga0137463_1153635All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium866Open in IMG/M
3300012355|Ga0137369_10832715Not Available626Open in IMG/M
3300012914|Ga0157297_10321028Not Available591Open in IMG/M
3300012927|Ga0137416_12124813Not Available516Open in IMG/M
3300012958|Ga0164299_10024250All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2540Open in IMG/M
3300012972|Ga0134077_10029964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus1926Open in IMG/M
3300012985|Ga0164308_12062886Not Available531Open in IMG/M
3300013308|Ga0157375_13251677Not Available542Open in IMG/M
3300014325|Ga0163163_10764484Not Available1029Open in IMG/M
3300015264|Ga0137403_10110002All Organisms → cellular organisms → Bacteria2758Open in IMG/M
3300015358|Ga0134089_10276151All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium693Open in IMG/M
3300015373|Ga0132257_103915910All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300016422|Ga0182039_10134326All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1889Open in IMG/M
3300017966|Ga0187776_10997172Not Available615Open in IMG/M
3300017997|Ga0184610_1279479All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium552Open in IMG/M
3300018056|Ga0184623_10097726All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1356Open in IMG/M
3300018056|Ga0184623_10471599All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300018072|Ga0184635_10007896All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3580Open in IMG/M
3300018429|Ga0190272_12924123All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300018469|Ga0190270_12879962Not Available543Open in IMG/M
3300018481|Ga0190271_11727866Not Available739Open in IMG/M
3300019356|Ga0173481_10064390All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1306Open in IMG/M
3300019356|Ga0173481_10335330Not Available717Open in IMG/M
3300019458|Ga0187892_10406705Not Available646Open in IMG/M
3300019886|Ga0193727_1151478All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium629Open in IMG/M
3300022214|Ga0224505_10142050All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium929Open in IMG/M
3300025160|Ga0209109_10381926Not Available659Open in IMG/M
3300025165|Ga0209108_10397872Not Available676Open in IMG/M
3300025310|Ga0209172_10473185Not Available582Open in IMG/M
3300025791|Ga0210115_1096101Not Available602Open in IMG/M
3300025930|Ga0207701_10071966All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3138Open in IMG/M
3300025993|Ga0208415_1028048All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium552Open in IMG/M
3300026004|Ga0208416_1013613All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium636Open in IMG/M
3300026041|Ga0207639_12268711Not Available504Open in IMG/M
3300026075|Ga0207708_11107159All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300026088|Ga0207641_11352431Not Available713Open in IMG/M
3300026320|Ga0209131_1272221Not Available649Open in IMG/M
3300026323|Ga0209472_1031266All Organisms → cellular organisms → Bacteria2432Open in IMG/M
3300026329|Ga0209375_1015310All Organisms → cellular organisms → Bacteria4572Open in IMG/M
3300026332|Ga0209803_1026566All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2791Open in IMG/M
3300026452|Ga0256821_1026718Not Available631Open in IMG/M
3300026524|Ga0209690_1014582All Organisms → cellular organisms → Bacteria4098Open in IMG/M
3300027462|Ga0210000_1059681All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium617Open in IMG/M
3300027722|Ga0209819_10041276All Organisms → cellular organisms → Bacteria1575Open in IMG/M
3300027723|Ga0209703_1206479Not Available720Open in IMG/M
3300027819|Ga0209514_10383471Not Available611Open in IMG/M
3300027840|Ga0209683_10552823Not Available525Open in IMG/M
3300027873|Ga0209814_10134085All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1059Open in IMG/M
3300027886|Ga0209486_10604844Not Available696Open in IMG/M
3300027909|Ga0209382_11530962All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium663Open in IMG/M
3300028784|Ga0307282_10225129All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium899Open in IMG/M
3300031170|Ga0307498_10018541All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1547Open in IMG/M
3300031198|Ga0307500_10221731All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300031226|Ga0307497_10095489All Organisms → cellular organisms → Bacteria1148Open in IMG/M
3300031562|Ga0310886_10344981All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium864Open in IMG/M
3300032770|Ga0335085_10093761All Organisms → cellular organisms → Bacteria3902Open in IMG/M
3300034149|Ga0364929_0260787Not Available585Open in IMG/M
3300034690|Ga0364923_0146953All Organisms → cellular organisms → Bacteria613Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere12.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.02%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.72%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.15%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.94%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.36%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.36%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.36%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.36%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.36%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.36%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.57%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.57%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.57%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.57%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.57%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.57%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.57%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.57%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.57%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.57%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.79%
SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment0.79%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.79%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.79%
Hot Spring SedimentsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Sediments0.79%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs0.79%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment0.79%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.79%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.79%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.79%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.79%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.79%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.79%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000443Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemlyEnvironmentalOpen in IMG/M
3300000655Forest soil microbial communities from Amazon forest - 2010 replicate II A100EnvironmentalOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000858Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002124Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3EnvironmentalOpen in IMG/M
3300003890Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing - Chocolate Pots Core 3, 1cmEnvironmentalOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300003994Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300003995Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2EnvironmentalOpen in IMG/M
3300004071Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011438Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012501Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300022214Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300025160Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2EnvironmentalOpen in IMG/M
3300025165Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1EnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025549Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025791Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025993Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)EnvironmentalOpen in IMG/M
3300026004Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302 (SPAdes)EnvironmentalOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026452Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027462Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027654Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027722Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027723Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027819Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)EnvironmentalOpen in IMG/M
3300027840Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M
3300034690Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F12B_1211676513300000443SoilMEKNKYLAISALGFFLTGCAGMTKNQAALVGAATCG
AF_2010_repII_A100DRAFT_107782213300000655Forest SoilMEKNKYLAISALGFFLTGCAGMSKNQAALVGAATCGAGGAAGGAL
JGI11643J11755_1102810113300000787SoilMTNSNKYLAXTALGFFMTGXTGMTKTQAGLVGAAVCGAA
JGI11643J11755_1166612413300000787SoilMQKNKYLALTAAGFFLAGCTGMTRNQAATVGALTCGVAGAG
JGI1027J11758_1243067413300000789SoilMQTNKYLAMSALGFFLTGCAGMSKNQAALVGAATCGAGGAAG
JGI10213J12805_1004072523300000858SoilMQNNKYLALTALGFLLAGCTGMTRNQAALVGALTCGAAGAGGGAYA
JGI11643J12802_1097207013300000890SoilMNRNKHLALAALGFFLTGCTGMTKNQAALVGAATCGAMGAAGGAMAA
JGI1027J12803_10254998333300000955SoilMEKNKYLAISALGFFLTGCAGMSKNQAALVGAATCGAGG
JGI10216J12902_10354345013300000956SoilMKRNKQLALAALGFFLTGCTGITKNQAALVGAAVCGTMAGGGVAASRAHEN
C687J26631_1024114023300002124SoilMEKNKYLALTALGFFLSGCTGVLTKNQAALVGALTCGAGGAAAGGIIT
Ga0063162_107090013300003890Hot Spring SedimentsMKRNKQLALAALGFFLSGCTGMTKNQAALVGAATCGAMGAAGG
Ga0055471_1020539813300003987Natural And Restored WetlandsMRKNKFLTIVAAGFLLSGCAGMTKRQAALVGATVCGAMGAGGG
Ga0055435_1018862713300003994Natural And Restored WetlandsMNRNKYLALTALVFFMSACTGMTKRQAAIVGASVCGVAGAAGGGAAAHSGI
Ga0055438_1026112523300003995Natural And Restored WetlandsMQTNKYLALSALGFFLSSCTGIMTKEQAAIVGAATCGIMGGAGGAYIGNQ
Ga0055486_1003232323300004071Natural And Restored WetlandsMNRNKYLALTALGFFMVGCTGMTKKQAALVGASVSGVAGAG
Ga0062590_10218563113300004157SoilMTNSNKYLALTALGFFMTGCTGMTKTQAGLVGAAVCGAAG
Ga0062595_10173383013300004479SoilMKTSKHLALTALGFFLTAGCAGMSKTQSALVGAAACGAGGAGVGAAV
Ga0062592_10125453323300004480SoilMQKNKYLALTAAGFFLAGCTGMTRNQAATVGALTCGVAGAGAGVYAAHQGING
Ga0066683_1046595223300005172SoilMKKNKQLALAALGFFLTGCTGMTKNQAALVGAAVCGTMAGAGVGAS
Ga0066683_1056613513300005172SoilMIGSKQLALAAVGFFLSGCAGMTKNQAAVFGAATCGIVGGAA
Ga0070659_10016725733300005366Corn RhizosphereMKRNKELALVALGLFMTGCTGMTKTQAAIVGASFCGISTGAGV
Ga0073909_1001133313300005526Surface SoilMKHDRQLALAVLGFFLTGCAGMSKTQSALVGAAACGAGG
Ga0070704_10060763213300005549Corn, Switchgrass And Miscanthus RhizosphereMTKSQYAALLAGGFLLTGCTGMTKTQAAIVGASFCGVATG
Ga0066707_1007955013300005556SoilMGKNKYLALSALGYFLSGCAGTGLTKNQAALLGAVGCGAV
Ga0070664_10054862133300005564Corn RhizosphereMKRNKELALVALGLFMTGCTGMTKTQAAIVGASFCGIS
Ga0068852_10100810413300005616Corn RhizosphereMKRNKQMAFVALGMFLTGCTGVMSKNQAALVGATLCGTAAGAGVGASRD
Ga0066905_10206141013300005713Tropical Forest SoilMNRNKQLALAVLGFFLTGCTGMTKMQAAMVGAGVC
Ga0068861_10196706413300005719Switchgrass RhizosphereMKRNKELALVALGLFMTGCTGMTKTQAAIVGASFCGISTGAG
Ga0068863_10030847713300005841Switchgrass RhizosphereMKRNKQMAFVALGMFLTGCTGVMSKNQAALVGATLCGTAAGAGVG
Ga0075417_1037826613300006049Populus RhizosphereMKRNKELALVALGLFMTGCTGMTKTQAAIVGASFC
Ga0068871_10130583713300006358Miscanthus RhizosphereMKRNKQMAFVALGMFLTGCTGVMTKTQAALVGATLCGTAAGAG
Ga0068871_10142567023300006358Miscanthus RhizosphereMMQKSNYIALTALGFFLTGCVGLTKNQAALIGATLC
Ga0066659_1052863713300006797SoilMKIRKQLALAALGFFVTGCTGMTKNQAAIVGASTCGAMTAAGVAGSRTHDRWV
Ga0075428_10246522713300006844Populus RhizosphereMNKNKHLALAALGFFLAGCTGMTKNQAALVGASVCGAMGAMG
Ga0075421_10217947213300006845Populus RhizosphereMTKNNKYLALTALGFFMAGCTGLTKNQAALVGASVCGVMG
Ga0075421_10223469313300006845Populus RhizosphereMQNNKYLALTALGFFLAGCTGMTRNQAAMVGALTCGAAGA
Ga0075430_10049620813300006846Populus RhizosphereMEKNKYLAISALGFFLTGCAGMSKNQAALVGAATCG
Ga0075433_1026017433300006852Populus RhizosphereMKHDRQLALAVLGFFLTGCAGMSKTQSALVGAAACGAGGAGVGAAVAH
Ga0075434_10055279733300006871Populus RhizosphereMKQHKQLALATLGLFLTGCTGMTKTQAAIVGASFCGVATGA
Ga0075429_10188592723300006880Populus RhizosphereMEKNKYLAISALGFFLTGCAGMSKNQAALVGAATCGAGGAAGG
Ga0079215_1066592413300006894Agricultural SoilMQNNKYLALTALGFFLAGCTGMTRNQAAMVGALTCGAAGAGGGAYA
Ga0075426_1146088613300006903Populus RhizosphereMQTNKYLAMSALGFFLTGCAGMSKNQAALVGAATCGAGGAA
Ga0075424_10008794843300006904Populus RhizosphereMQTNKYLALSALGFFLSGCTGVMSKETAAIVGAATCGIMGGAGGAYIGRQHGSTG
Ga0075436_10039841633300006914Populus RhizosphereMKRQKQLALATLGLFLTGCTGMTKTQAAIVGASFCG
Ga0079218_1364202313300007004Agricultural SoilMKKNKQLALAALGFFLTGCTGMTKNQAALVGAGVCGAMGAM
Ga0075435_10120525023300007076Populus RhizosphereMKISKQLALAALGVFVTGCTGMTKNQAAIVGASTCGAMTAA
Ga0066710_10035898833300009012Grasslands SoilMEKNQYIALAALGFFLSGCTGVTKTQSALIGAATCAVAGGAGGG
Ga0111539_1011369653300009094Populus RhizosphereMKHNRQLALGVLGFFLTGCAGMSKNQAALVGAAACGAGGAGVGAAVAHHG
Ga0111538_1412090823300009156Populus RhizosphereMKHDRQLALAVLGFFLTGCAGMSKNQAALVGAAACGA
Ga0105242_1011484813300009176Miscanthus RhizosphereMTKSQYAALLAGGFLLTGCTGMTKTQAAIVGASFCG
Ga0126382_1042463323300010047Tropical Forest SoilMKKNKQLALVAVGFFLSGCTGMTKTQAALTGAGVCGLMG
Ga0126382_1125262223300010047Tropical Forest SoilMNRNKPLALAALGFFLSGCSGMTKNQAAIVGASVCGAMGAGGGWAVA
Ga0134086_1002242643300010323Grasslands SoilMGKNKYIALSALGFFLSGCTGTGLTKNQAALLGAVGC
Ga0134063_1015538213300010335Grasslands SoilMGKNKYIALSALGFFLSGCTGTGLTKNQAALLGAVGCGAVGAGV
Ga0126377_1011599433300010362Tropical Forest SoilMKKNKQLALVAVGFFLSGCTGMTKTQAALTGAGVC
Ga0105239_1297149313300010375Corn RhizosphereMTKSQYAALLAGGFLLTGCTGMTKTQAAIVGASFC
Ga0134126_1174545723300010396Terrestrial SoilMKIGKHLALAALGFFVTGCTGVMTKNQAALVGATFCGTATGAGVGTA
Ga0134122_1031807043300010400Terrestrial SoilMNRNKHLALAALGFFLTGCTGLTKNQAALVGASVCGVMGGA
Ga0134122_1161816123300010400Terrestrial SoilMMTKNNKYLALTALGFFMSGCTGLTKNQAALVGAGVCGAFGAGGGAGVARN
Ga0137451_109851023300011438SoilMTNSNKYLALTALGFFMTGCTGLTKNQAALVGATVCGLGGAGAGA
Ga0137463_115363513300011444SoilMRNKRYLALTALGFFLTGCTGMTKNQAALVGASVCGALGGTGGAVLAHQ
Ga0137369_1083271523300012355Vadose Zone SoilMKKNKRLALAALGFFLTGCTGMTKNQAALVGAAFCGTAAGVG
Ga0157351_101429223300012501Unplanted SoilMKHDRQLALAVLGFFLTGCAGMSKTQSALVGAAACGAGGAGVGAAVAHHGING
Ga0157297_1032102813300012914SoilMQKNKYLALTAAGFFLAGCTGMTRNQAATVGALTCGVAGAGAGV
Ga0137416_1212481313300012927Vadose Zone SoilMKRSKRLALTALGFFLTGCAGMTKTQSALVAAAACGA
Ga0164299_1002425013300012958SoilMKRNKELALVALGLFMTGCTGMTKTQAAIVGASFCGI
Ga0134077_1002996413300012972Grasslands SoilMGKNKYLALSALGFFLSGCTGTGLTKNQAALLGAVG
Ga0164308_1206288613300012985SoilMKRNKELALVALGLFMTGCTGMTKTQAAIVGASFCG
Ga0157375_1325167713300013308Miscanthus RhizosphereMKTSKHLALTALGFFLTGCAGMTKTQSALVAAAACGAGGAGVGA
Ga0163163_1076448413300014325Switchgrass RhizosphereMKRNKELALVALGLFMTGCTGMTKTQAAIVGASFCGISTGA
Ga0137403_1011000243300015264Vadose Zone SoilMQTNKYLAMSALGFFLTGCAGMSKNQAALVGAATC
Ga0134089_1027615123300015358Grasslands SoilMKKNKLLALAALGFFLTGCTGMTKNQAALVGAAVCGTMAGAGVGASRAHENN
Ga0132257_10391591013300015373Arabidopsis RhizosphereMKHNRQLALGVLGFFLTGCAGMSKNQAALVGAAACGAGGAG
Ga0182039_1013432613300016422SoilMQKNKYLAMSALGFFLTGCAGMSKNQAAIVGATVCGLGGAAGGGLAANNG
Ga0187776_1099717213300017966Tropical PeatlandMGKNKYLALTAVGFFLAGCSGMTKTQGALLGAAICGAGGAGAG
Ga0184610_127947923300017997Groundwater SedimentMKRNKQLALAALGFFLTGCTGMTKNQAALVGGAVCGTMAGAGVGASR
Ga0184623_1009772633300018056Groundwater SedimentMLKNKSLVLAAAGFFLSGCAGMTKQQAALSGAAVC
Ga0184623_1047159923300018056Groundwater SedimentMTKNNKYLALTALGFFMAGCTGLTKNQAALVGAGVCGAMGAMGGAAAAHQGI
Ga0184635_1000789613300018072Groundwater SedimentMKHDRQLALAVLGFFLTGCAGMSKTQSALVGAAACGAGGA
Ga0184640_1003535413300018074Groundwater SedimentMKHDRQLALAVLGFFLTGCAGMSKTQSALVGAAACGAGGAGVGAAVAHHGINGSH
Ga0190272_1292412323300018429SoilMNKNKYLALTAVGFFLSGCGTMTKNQAALVGASVCGAMGAGVG
Ga0190270_1287996223300018469SoilMTKNNKYLALTALGFFMAGCTGLTKNQAALVGASVCGVMGGAGGAAVA
Ga0190271_1172786613300018481SoilMQNNKYLALTALGFFLAGCTGMTRNQAAMVGALTCGAAGAGG
Ga0173481_1006439013300019356SoilMKRNKQMAFVALGMFLTGCTGVMTKNQAALVGATLCGTAAGAGV
Ga0173481_1033533013300019356SoilMQKNKYLALTAAGFFLTGCAGMTRNQAALVGALTCGAAGAGGG
Ga0187892_1040670523300019458Bio-OozeMVKQKYLALTVMGFFLSAGCTMSKNQAALIGAATCGAAGAGIGAAA
Ga0193725_113996723300019883SoilMKHDRQLALAVLGFFLTGCAGMSKTQSALVGAAACGAGGAGVGAAVAHHGINGSHVN
Ga0193727_115147823300019886SoilMQTNKYLAMSALGFFLTGCAGMSKNQAALVGAATCGAGG
Ga0224505_1014205023300022214SedimentMTNRNKYLALTALGFFMTGCTGLTKNQAALVGAAVCGAGGAAAG
Ga0212128_1026441313300022563Thermal SpringsMEKNKYLAMTAVGFFLTGCAGMTKNQAALVGALTCGAAGAAAGGIITHNTGHRLSE
Ga0209109_1038192613300025160SoilMEKNKYLALAVVGFFFSGCTGVMTKNQAAVVGALTCGT
Ga0209108_1039787223300025165SoilMEKNKYLALTVVGFFLTGCTGVMTKNQAALVGALT
Ga0209172_1047318523300025310Hot Spring SedimentMLKRKFVALGVLGFFLSGCTGLTRNQAMTVGAVTCGLGGAGIGAAVAHQGIRG
Ga0210094_110148113300025549Natural And Restored WetlandsMQTNKYLALSALGFFLSSCTGIMTKEQAAIVGAATCGIMGGAGGAYIGNQHGS
Ga0210115_109610123300025791Natural And Restored WetlandsMRKNKFLTIVAAGFLLSGCAGMTKRQAALVGATVCGAMGAGGGAAIAH
Ga0207684_1117176213300025910Corn, Switchgrass And Miscanthus RhizosphereMKKNKLLALAALGFFLTGCTGMTKNQAALVGAAVCGTMAGAGVGASRAHENNTWVAAP
Ga0207701_1007196613300025930Corn, Switchgrass And Miscanthus RhizosphereMQKNKYLALTAAGFFLTGCAGMTRNQAALVGALTCGAAGAG
Ga0208415_102804813300025993Rice Paddy SoilMNRNKHLALAALGFFLTGCTGMTKNQAALVGAATCGAMGAAGGAMAAH
Ga0208416_101361313300026004Rice Paddy SoilMNRNKHLALAALGFFLTGCTGMTKNQAALVGAATCGA
Ga0207639_1226871123300026041Corn RhizosphereMKRNKQMAFVALGMFLTGCTGVMTKNQAALVGATLCGTAAGAGVG
Ga0207708_1110715913300026075Corn, Switchgrass And Miscanthus RhizosphereMTKNNKYLALTALGFFMSGCTGLTKNQAALVGAGVCGAFGAGGGAGVARNKDKNVYAGAA
Ga0207641_1135243113300026088Switchgrass RhizosphereMKRNKQMAFVALGMFLAGCTGVMSKNQAALVGATLCGTAAGAGVGASRD
Ga0209131_127222113300026320Grasslands SoilMKSNKYVALSALGFFLTGCAGMTKNQAALVGAGLCGAGGAGIGAASAHQGV
Ga0209472_103126633300026323SoilMGKNKYLALSALGFFLTGCTGMTKTQGALLGAVTCGAAGAGIGA
Ga0209375_101531043300026329SoilMGKNKYLALSALGFFLTGCTGMTKTQGALLGAVTCGA
Ga0209803_102656613300026332SoilMGKNKYLALSALGFFLSGCTGTGLTKNQAALLGAVGC
Ga0256821_102671813300026452SedimentMTNKNRYLALSALGFFMTGCTGTMTKNEAALSAAAFCGASAGL
Ga0209690_101458243300026524SoilMGKNKYIALSALGFFLSGCAGTGLTKNQAALLGAVGCGAVGAGVGVGI
Ga0210000_105968123300027462Arabidopsis Thaliana RhizosphereMNRNKHLALAALGFFLTGCTGMTKNQAALVGAATCGAMGAA
Ga0209799_102744123300027654Tropical Forest SoilMQTNKYLALSALGLFLSSCTGVMSKETAAIVGAATCGAMGAGGGAYIGHQHGNF
Ga0209819_1004127633300027722Freshwater SedimentMEKNKYLAISALGFFLTGCAGMTKNQAALVGAATCGAAGAG
Ga0209703_120647923300027723Freshwater SedimentMKTNKYLALSALGFFLTGCTGVMTKNQAALVGALTCGAAGGAAGGI
Ga0209514_1038347113300027819GroundwaterMEKNKYIVMAVVGFFLSGCTGVLTKNQAGVVGALACGVMGGAIGGGTAAADGKG
Ga0209683_1055282313300027840Wetland SedimentMTNSNKYLALTALGFFMTGCTGMTKNQAALVSAAVCG
Ga0209814_1013408513300027873Populus RhizosphereMKKSRQLALVALGFFLSGCTGMTKNQAAIVGASVCGAMGAAG
Ga0209486_1060484413300027886Agricultural SoilMNTNKHLALAALGFFLTGCTGMTKNQAALVGASVCGA
Ga0209382_1153096223300027909Populus RhizosphereMKRNKELALVALGLFMTGCTGMTKTQAAIVGASFCGVS
Ga0307282_1022512923300028784SoilMKISKQLALAALGFFMSGCTGMTKNQAAIVGASTCGAMTAAGVAGTRTHDR
Ga0307498_1001854123300031170SoilMKTSKHLALTALGFFLTGCAGMSKTQSALVGAAACGAGGAGVGAAVAHH
Ga0307500_1022173123300031198SoilMKHDRQLALAVLGFFLTGCAGMSKTQSALVGAAACGAGGAG
Ga0307497_1009548923300031226SoilMKHDRQLALAVLGFFLTGCAGMSKTQSALVGAAACGAGGAGVGAAVAHH
Ga0310886_1034498113300031562SoilMQTNKYLAMSALGFFLTGCAGMTRNQAALVGAATCGVGGAAGGAMAAHNGVQ
Ga0307468_10173894823300031740Hardwood Forest SoilMKHDRQLALAVLGFFLTGCAGMSKTQSALVGAAACGAGGAGVGAAVAHHGIN
Ga0307470_1013801413300032174Hardwood Forest SoilMKHDRQLALAVLGFFLTGCAGMSKTQSALVGAAACGAGGAGVGAAVAHHGINGSHV
Ga0335085_1009376113300032770SoilMQTNKYLALTALGFFMSGCTGVMTKETAAIVGAATCG
Ga0364929_0260787_3_1403300034149SedimentMTKNNKYLALTALGFFLAGCTGLTKNQAALVGASVCGVMGAAGGAA
Ga0364923_0146953_484_6123300034690SedimentMDQNKYLTLAVLAFFLTGCTGVMTKNQAAMVGAATCGTIGGLG


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