Metagenome / Metatranscriptome Family F065866

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065866
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	82 residues
Representative Sequence	GGDPDRGLDLNGRAVMALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGA
Number of Associated Samples	113
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.43 %
% of genes from short scaffolds (< 2000 bps)	86.61 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.063 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.323 % of family members)
Environment Ontology (ENVO)	Unclassified (39.370 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.094 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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SCOP family	SCOP domain	Representative PDB	TM-score
e.11.1.0: automated matches	d3ilwa_	3ilw	0.64071
e.22.1.2: Iron-containing alcohol dehydrogenase	d5br4a1	5br4	0.63732
a.90.1.1: Transcription factor STAT-4 N-domain	d1bgfa_	1bgf	0.62363
c.6.2.4: AmyC N-terminal domain-like	d2b5dx2	2b5d	0.6046
c.6.2.4: AmyC N-terminal domain-like	d3p0ba1	3p0b	0.60096

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF13520	AA_permease_2	18.11
PF00324	AA_permease	7.87
PF00999	Na_H_Exchanger	4.72
PF08669	GCV_T_C	3.94
PF00120	Gln-synt_C	3.15
PF13561	adh_short_C2	1.57
PF03951	Gln-synt_N	1.57
PF00990	GGDEF	1.57
PF02782	FGGY_C	0.79
PF00106	adh_short	0.79
PF16350	FAO_M	0.79
PF00753	Lactamase_B	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	7.87
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	7.87
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	7.87
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	7.87
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	4.72
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	4.72
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	4.72
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	4.72
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	4.72
COG0174	Glutamine synthetase	Amino acid transport and metabolism [E]	1.57

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.06 %
Unclassified	root	N/A	3.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.06 %
Unclassified	root	N/A	3.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.06 %
Unclassified	root	N/A	3.94 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.83 %
Unclassified	root	N/A	3.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.31 %
Unclassified	root	N/A	3.94 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	73.23 %
Unclassified	root	N/A	3.94 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	54.33 %
Unclassified	root	N/A	3.94 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	54.33 %
Unclassified	root	N/A	3.94 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2119805009\|FNTS007_GKN1E7E02HULRL	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0750373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300000891\|JGI10214J12806_10554486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1715	Open in IMG/M
3300003373\|JGI25407J50210_10181617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300004156\|Ga0062589_101417706	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300004156\|Ga0062589_102197136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300004463\|Ga0063356_101034972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1176	Open in IMG/M
3300004643\|Ga0062591_100077319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2046	Open in IMG/M
3300005328\|Ga0070676_11176046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300005329\|Ga0070683_100081083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3038	Open in IMG/M
3300005336\|Ga0070680_101933901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300005339\|Ga0070660_101386857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300005343\|Ga0070687_100600332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300005343\|Ga0070687_101507577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300005344\|Ga0070661_101345940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300005347\|Ga0070668_101389801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300005353\|Ga0070669_101361991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300005355\|Ga0070671_100886393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300005356\|Ga0070674_100308123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1265	Open in IMG/M
3300005365\|Ga0070688_100068851	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300005441\|Ga0070700_101752689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300005444\|Ga0070694_100686305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	832	Open in IMG/M
3300005455\|Ga0070663_100494116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1015	Open in IMG/M
3300005530\|Ga0070679_101442907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300005543\|Ga0070672_100954229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	759	Open in IMG/M
3300005543\|Ga0070672_101779714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300005578\|Ga0068854_101291821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300005616\|Ga0068852_102757897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300005617\|Ga0068859_100227810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1952	Open in IMG/M
3300005718\|Ga0068866_11277616	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005719\|Ga0068861_102431324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300005842\|Ga0068858_100142443	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300005889\|Ga0075290_1063918	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005981\|Ga0081538_10085584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1655	Open in IMG/M
3300006058\|Ga0075432_10100759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1067	Open in IMG/M
3300006237\|Ga0097621_102094228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300006572\|Ga0074051_11010814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300006880\|Ga0075429_101161077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674	Open in IMG/M
3300006881\|Ga0068865_100975763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300007004\|Ga0079218_11855723	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300007004\|Ga0079218_12336344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300009098\|Ga0105245_10263928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1677	Open in IMG/M
3300009098\|Ga0105245_10386954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1394	Open in IMG/M
3300009156\|Ga0111538_11640137	Not Available	810	Open in IMG/M
3300009174\|Ga0105241_12284502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300009545\|Ga0105237_12045929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300009789\|Ga0126307_10527175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	953	Open in IMG/M
3300009818\|Ga0105072_1003083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2678	Open in IMG/M
3300010029\|Ga0105074_1077620	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300010038\|Ga0126315_11128032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300010041\|Ga0126312_10143300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1656	Open in IMG/M
3300010041\|Ga0126312_10941572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	630	Open in IMG/M
3300010041\|Ga0126312_11006340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300010045\|Ga0126311_10231702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1362	Open in IMG/M
3300010047\|Ga0126382_12377798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300010323\|Ga0134086_10249224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	676	Open in IMG/M
3300012159\|Ga0137344_1091391	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300012353\|Ga0137367_10006296	All Organisms → cellular organisms → Bacteria	9533	Open in IMG/M
3300012684\|Ga0136614_11039559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	563	Open in IMG/M
3300012899\|Ga0157299_10080116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300012904\|Ga0157282_10118365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300012907\|Ga0157283_10152762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300012941\|Ga0162652_100057830	All Organisms → cellular organisms → Bacteria → Terrabacteria group	642	Open in IMG/M
3300012941\|Ga0162652_100065678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300013100\|Ga0157373_10444519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	932	Open in IMG/M
3300013306\|Ga0163162_11907356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300013307\|Ga0157372_13383884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300013308\|Ga0157375_10714005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1156	Open in IMG/M
3300014268\|Ga0075309_1096810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300014272\|Ga0075327_1262047	Not Available	567	Open in IMG/M
3300014745\|Ga0157377_11423498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300015077\|Ga0173483_10108967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1167	Open in IMG/M
3300015374\|Ga0132255_100175265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3015	Open in IMG/M
3300018078\|Ga0184612_10154176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1201	Open in IMG/M
3300018422\|Ga0190265_11341236	Not Available	831	Open in IMG/M
3300018432\|Ga0190275_10384118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1409	Open in IMG/M
3300018465\|Ga0190269_10281537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300018466\|Ga0190268_11466112	All Organisms → cellular organisms → Bacteria → Terrabacteria group	590	Open in IMG/M
3300019884\|Ga0193741_1150696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300020005\|Ga0193697_1012555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2071	Open in IMG/M
3300020202\|Ga0196964_10303551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300022694\|Ga0222623_10057803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1494	Open in IMG/M
3300022694\|Ga0222623_10389267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300022756\|Ga0222622_10556587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300022886\|Ga0247746_1137572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300023071\|Ga0247752_1063110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300025327\|Ga0209751_10195791	All Organisms → cellular organisms → Bacteria → Proteobacteria	1732	Open in IMG/M
3300025904\|Ga0207647_10201562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1151	Open in IMG/M
3300025918\|Ga0207662_10618358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	755	Open in IMG/M
3300025921\|Ga0207652_10098463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2579	Open in IMG/M
3300025923\|Ga0207681_10484547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1011	Open in IMG/M
3300025927\|Ga0207687_10099542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2136	Open in IMG/M
3300025941\|Ga0207711_10105946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2494	Open in IMG/M
3300026023\|Ga0207677_10153951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1778	Open in IMG/M
3300026032\|Ga0208419_1044395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300026035\|Ga0207703_11537520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300026527\|Ga0209059_1160124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	810	Open in IMG/M
3300027523\|Ga0208890_1046241	Not Available	683	Open in IMG/M
3300027561\|Ga0209887_1000067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27836	Open in IMG/M
3300027561\|Ga0209887_1060733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300027722\|Ga0209819_10118020	All Organisms → cellular organisms → Bacteria → Terrabacteria group	927	Open in IMG/M
3300028707\|Ga0307291_1064232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	894	Open in IMG/M
3300028708\|Ga0307295_10022612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1545	Open in IMG/M
3300028717\|Ga0307298_10096582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	837	Open in IMG/M
3300028720\|Ga0307317_10002696	All Organisms → cellular organisms → Bacteria	5386	Open in IMG/M
3300028744\|Ga0307318_10284553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300028755\|Ga0307316_10050237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1399	Open in IMG/M
3300028755\|Ga0307316_10346856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300028778\|Ga0307288_10291183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300028778\|Ga0307288_10494051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300028811\|Ga0307292_10371524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300028876\|Ga0307286_10068229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1223	Open in IMG/M
3300028881\|Ga0307277_10391641	All Organisms → cellular organisms → Bacteria → Terrabacteria group	621	Open in IMG/M
3300030336\|Ga0247826_10394512	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300030336\|Ga0247826_10817038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300031824\|Ga0307413_10897964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	752	Open in IMG/M
3300031903\|Ga0307407_10086757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1907	Open in IMG/M
3300032002\|Ga0307416_103822451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300032003\|Ga0310897_10617190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300032004\|Ga0307414_10051173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2866	Open in IMG/M
3300032005\|Ga0307411_11938224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300032013\|Ga0310906_11181514	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300032211\|Ga0310896_10856159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300033550\|Ga0247829_10077210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2441	Open in IMG/M
3300033550\|Ga0247829_10167825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1722	Open in IMG/M
3300033551\|Ga0247830_10100013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2036	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.57%
Host-Associated	Host-Associated	35.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.06%
Plants	Host-Associated → Plants	35.43%
Aquatic	Environmental → Aquatic	5.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.24%
Sediment	Environmental → Aquatic → Sediment	3.94%
Roots	Host-Associated → Plants → Roots	2.36%
Freshwater	Environmental → Aquatic → Freshwater	1.57%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.17%
Loam	Environmental → Terrestrial → Soil → Loam	9.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.66%
Sand	Environmental → Terrestrial → Soil → Sand	4.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.36%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.57%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Ice	Environmental → Aquatic → Freshwater → Ice	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.66%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.30%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.15%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.36%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.57%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.57%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.30%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.15%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.15%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.15%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.15%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.36%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.57%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.57%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.79%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.79%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2119805009	Soil microbial communities from sample at FACE Site NTS_007 Nevada Test Site	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026032	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FNTS007_03008050	2119805009	Soil	VTALADDLRSSDRQLVLEAGLRDLRFEASGLPHVTEALRALVDTPDVAWRAYACSLLAEELGEE
ICChiseqgaiiDRAFT_07503732	3300000033	Soil	VAGQGIQIGEEEAHGASRRALLLLTAGGDPERGLDLNGRAVSALAEEVRTVDRQLALERGLDELKAEAKGXPXVSEALXALRATPDVAWRAYACSLLAEELGAG*
JGI10214J12806_105544862	3300000891	Soil	GGDPDRGLDLNGRAVTALADEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG*
JGI25407J50210_101816171	3300003373	Tabebuia Heterophylla Rhizosphere	DEARGAARRALLLLSAGGDPERGLDLHGRAVTAIADDLRTVDRQLALESGLRQLRLQAEGLPHVSEALHGLSEAPDVAWRAYAAGVLAQALDEDQS*
Ga0062589_1014177062	3300004156	Soil	LLLSTGGDPGRGLDLHGRAVSAMADDLRTVDRQIALEDGVKELRLEAEGLAHVSEAIHGLVEAPDVAWRAYAAGVLAQELEED*
Ga0062589_1021971362	3300004156	Soil	IGEEEAHGASRRALLLLTAGGDPERGLDLNGRAVSALAEEVRTVDRQLALERGLDELKAESKGLPHVSEALAALRATPDVAWRAYACSLLAEELGAG*
Ga0063356_1010349721	3300004463	Arabidopsis Thaliana Rhizosphere	NGRAVTALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTAMRATPDVAWRAYACSLLAEELGAG*
Ga0062591_1000773191	3300004643	Soil	AGQGIQIGEEEAHGASRRALLLLTAGGDPERGLDLNGRAVSALAEEVRTVDRQLALERGLDELKAESKGLPHVSEALAALRATPDVAWRAYACSLLAEELGAG*
Ga0070676_111760462	3300005328	Miscanthus Rhizosphere	RAVMALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGD*
Ga0070683_1000810831	3300005329	Corn Rhizosphere	HGASRRALLLLTAGGDPDRGLDLNGRAVTALAEEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELG*
Ga0070680_1019339012	3300005336	Corn Rhizosphere	LDLNGRAVSALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGD*
Ga0070660_1013868572	3300005339	Corn Rhizosphere	TAGGDPDRGLDLNGRAVTALAEEVRNVDRQLALERGLDELKAAAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGA*
Ga0070687_1006003321	3300005343	Switchgrass Rhizosphere	HGASRRALLLLTAGGDPDRGLDLNGRAVNALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGD*
Ga0070687_1015075771	3300005343	Switchgrass Rhizosphere	LLLTAGGDPDRGLDLNGRAVTALADEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG*
Ga0070661_1013459401	3300005344	Corn Rhizosphere	PDRGLDLNGRAVNALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGD*
Ga0070668_1013898011	3300005347	Switchgrass Rhizosphere	AGGDPDRGLDLNGRAVVALANEVRTVDRQLALERGLDELKAQSKGLPHVSEALAALRATPDVAWRAYACSLLAEELGAE*
Ga0070669_1013619912	3300005353	Switchgrass Rhizosphere	AGGDPDRGLDLNGRAVMALAEEVRTVDRQLALESGLDELKADAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGD*
Ga0070671_1008863932	3300005355	Switchgrass Rhizosphere	LTAGGDPDRGLDLNGRAVNALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGD*
Ga0070674_1003081232	3300005356	Miscanthus Rhizosphere	LLLLTAGGDPDRGLDLNGRAVVALANEARTVDRQLALERGLDELKAQSKGLPHVSEALAALRATPDVAWRAYACSLLAEELGAE*
Ga0070688_1000688511	3300005365	Switchgrass Rhizosphere	ALLLLTAGGDPDRGLDLNGRAVMALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGA*
Ga0070700_1017526892	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LLTAGGDPDRGLDLNGRAVMALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGAG*
Ga0070694_1006863052	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GDPDRGLDLNGRAVVALANEVRTVDRQLALERGLDELKAQSKGLPHVSEALAALRATPDVAWRAYACSLLAEELGAE*
Ga0070663_1004941162	3300005455	Corn Rhizosphere	TAGGDPDRGLDLNGRAVTALADEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG*
Ga0070679_1014429072	3300005530	Corn Rhizosphere	LLLTAGGDPDRGLDLNGRAVMALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGA*
Ga0070672_1009542292	3300005543	Miscanthus Rhizosphere	MALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGA*
Ga0070672_1017797141	3300005543	Miscanthus Rhizosphere	VAGQEVQIDEDEEHGASRRALLLLTAGGDPDRGLDLNGRAVTALAEEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRAT
Ga0070686_1016602571	3300005544	Switchgrass Rhizosphere	ALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGAG*
Ga0068854_1012918211	3300005578	Corn Rhizosphere	GASRRALLLLTAGGDPDRGLDLNGRAVTALADEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG*
Ga0068852_1027578972	3300005616	Corn Rhizosphere	EAHGASRRALLLLTAGGDPDRGLDLNGRAVVALANEVRTVDRQLALERGLDELKAQSKGLPHVSEALAALRATPDVAWRAYACSLLAEELGAE*
Ga0068859_1002278102	3300005617	Switchgrass Rhizosphere	VAGQGIQIGEDEAHGASRRALLLLTAGGDPDRGLDLNGRAVMALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGD*
Ga0068866_112776163	3300005718	Miscanthus Rhizosphere	GLDLNGRAVNALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGA*
Ga0068861_1024313242	3300005719	Switchgrass Rhizosphere	DLNGRAVMALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGD*
Ga0068858_1001424431	3300005842	Switchgrass Rhizosphere	DRGLDLNGRAVMALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGA*
Ga0075290_10639181	3300005889	Rice Paddy Soil	SSLAEELRTVDRQLALEAGLGELKSLAVGFPHVSELVAGLAATPDLAWRAYAASVLAEELGMDA*
Ga0081538_100855842	3300005981	Tabebuia Heterophylla Rhizosphere	LLTAGGDPARGLDLNGSAVTALATDLRSVDRQLALEEGIRDLRVRAKGLPHVSEAVHALADAPDVAWRAYAASLLADELAED*
Ga0075432_101007591	3300006058	Populus Rhizosphere	ASRRALLLLTAGGDPDRGLDLNGRAVMALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGAG*
Ga0097621_1020942281	3300006237	Miscanthus Rhizosphere	ALLLLTAGGDPDRGLDLNGRAVNALAEEVRTVDPQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGAG*
Ga0074051_110108142	3300006572	Soil	RALVLLGAGGDPTGGLDLHGRAVTAMADELRTVDRQLALEDGIRQLRVEASGLPHVSEAVHALADTPDVAWRAYAASLLAEELAGD*
Ga0075429_1011610771	3300006880	Populus Rhizosphere	RALLLLTAGGDPDRGLDLNGRAVMALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGAG*
Ga0068865_1009757632	3300006881	Miscanthus Rhizosphere	AGQGIQIGEDEAHGASRRALLLLTAGGDPDRGLDLNGRAVNALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGA*
Ga0079218_118557231	3300007004	Agricultural Soil	GDPERGLDLDGRAVTALADELRTVDRQLALEHGLLDLRVQAQGLSHASEVLHGLISAPEVAWRAYAAALLAEELDGAAE*
Ga0079218_123363441	3300007004	Agricultural Soil	GGDPERGLDLNGRAVTAIADDLRSVDRQLALEQAVAELRLQAQGLPHVSEAIKALADAPDVAWRAYACSLLAEELGTA*
Ga0105245_102639282	3300009098	Miscanthus Rhizosphere	LLLLTARGDPDRGLDLNGRAVNALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGA*
Ga0105245_103869542	3300009098	Miscanthus Rhizosphere	LASVAGQEVAIQDDEAHGASRRALLLLTAGGDPDRGLDLNGRAVVALANEVRTVDRQLALERGLDELKAQSKGLPHVSEALAALRATPDVAWRAYACSLLAEELGAE*
Ga0111538_116401372	3300009156	Populus Rhizosphere	STGGDPGRGLDLHGRAVSAMADDLRTVDRQIALEDGVKELRLEAEGLAHVSEAIHGLVEAPDVAWRAYVAGVLAQELEED*
Ga0105241_122845021	3300009174	Corn Rhizosphere	DPDRGLDLNGRAVTALADEVSTVARQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG*
Ga0105237_120459291	3300009545	Corn Rhizosphere	EHGASRRALLLLTAGGDPDRGLDLNGRAVTALADEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG*
Ga0126307_105271752	3300009789	Serpentine Soil	ALLLLTAGGDPSRGLDLNGRAVAGLADELRDVDRQLALEDGLRELRQLATGLPYVSEAVRALTDAPEVAWRAYACSLLATELGADEPDDELD*
Ga0105072_10030831	3300009818	Groundwater Sand	LDGRAVTALADDLRTVDRQLALEQGLVALRLQVQGLPHASEAVHGLIDAPDVAWRAYAAGLLAEELGGVDD*
Ga0105074_10776201	3300010029	Groundwater Sand	AGGDPERGLDLHGRAVSAMADDLRTVDRQIALEEGLKQLRVQAEGLAHVSEALHGLTDAPDVAWRAYVAGLLAQALAED*
Ga0126315_111280321	3300010038	Serpentine Soil	VLASVAGQGIQIEEDEAHGASRRALLLLTAGGDPDRGLDLNGRAVNALAQEVRTVDRQLALERGLDELKAEAKGLPHVSEALAALRATPDVAWRAYACSLLAEELGAG*
Ga0126312_101433002	3300010041	Serpentine Soil	AAGGDPERGLDLHGRAVTAVADELRTVDRQLALEQGIADLRAQAKGLPHVSEAVHALADAPDVAWRAFACSLLAEELGEG*
Ga0126312_109415722	3300010041	Serpentine Soil	GDPDRGLDLNGRAVNALAQEVRTVDRQLALERGLDELKAEAKGLPHVSEALAALRATPDVAWRAYACSLLAEELGAG*
Ga0126312_110063401	3300010041	Serpentine Soil	ADELRDVDRQLALEDGLRELRQLATGLPYVSEAVRALTDAPEVAWRAYACSLLATELGADEPDDELD*
Ga0126311_102317021	3300010045	Serpentine Soil	VAEDEAHGASRRALLLLAAGGNPDRGLDLNGRAVSALAEELRTVDRQLALERGLDELKAQAKGFAHISEALAALRATPDVAWRAYACSLLAEELGGG*
Ga0126382_123777981	3300010047	Tropical Forest Soil	RRALLLLTAGGDPERGLDLNGRAVSALAEDLRTVDRQLALERGLDELKAGAKGLPHVTEALAALRATPDVAWRAYACSLLAEELGD*
Ga0134086_102492241	3300010323	Grasslands Soil	DPDRGLDLNGRAVGALAEELRTVDRQLALDRGLDELKAQSKGLAHVSEAVAALRATPDVAWRAYACSLLAEELGD*
Ga0137344_10913912	3300012159	Soil	LLSAGGDPERGLDLHGRAVSAMADDLRTVDRQIALEEGLKQLRVQAEGLAHVSEALHGLTDAPDVAWRAYAAGLLAQALAED*
Ga0137367_100062961	3300012353	Vadose Zone Soil	RGLDLDGRAVTALADDLRTVDRQLALEQGLLGLRLQVQGLPHASEAVHGLIDAPDVAWRAYAAGLLAEELGG*
Ga0136614_110395591	3300012684	Polar Desert Sand	DPERGLDLNGRAVASLADDLRTVDRQLVLERGIGELKIQARDLPHILEAVKALGATPDVAWRAYACSLLAEELAGEE*
Ga0157299_100801161	3300012899	Soil	LLTAGGDPDRGLDLNGRAVTALADEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG*
Ga0157282_101183651	3300012904	Soil	SVAGQEVQIDEDEEHGASRRALLLLTAGGDPDRGLDLNGRAVTALADEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG*
Ga0157283_101527622	3300012907	Soil	LTAGGNPDRGLDLNGRAVTALADEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG*
Ga0162652_1000578302	3300012941	Soil	VGSLADDLRTVDRQLTLERGIGELKIQARDLPHVLEAVKALGATPDVAWRAYACSLLAEELAGEE*
Ga0162652_1000656781	3300012941	Soil	DEDEAHGASRRALLLLASGGDPERGLDLNGRAVTALAEEVRTVDRQLALDQGLDELKAQAKGLPHVSEAVAALRATPDVAWRAYACSLLAEELGAD*
Ga0157373_104445191	3300013100	Corn Rhizosphere	GGDPDRGLDLNGRAVTALAEEMRTVDRQLALERGLDELKAQAKGLPHVSEALAALRATPDVAWRAYACSLLAEELGG*
Ga0163162_119073561	3300013306	Switchgrass Rhizosphere	NGRAVVALADEVRTVDRQLALERGFDELKAQSKGLPHVSEALAALRATPDVAWRAYACSLLAEELGAE*
Ga0157372_133838841	3300013307	Corn Rhizosphere	AVTALAEEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG*
Ga0157375_107140052	3300013308	Miscanthus Rhizosphere	LDLNGRAVMALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGAG*
Ga0075309_10968102	3300014268	Natural And Restored Wetlands	NGRAVAALADELRDVDRQRALEDGLRDLRQDSTGLPHVSEAVRALLAAPDIAWRAYAASLLVEDLEGDEED*
Ga0075327_12620471	3300014272	Natural And Restored Wetlands	GLDLNGRAVTAIADDLRTADRQLSLENGMRDLRQLCSGLPHVSEAVNGLVAAPDVAWRAYAASLLAEDLAADDAEEDG*
Ga0157377_114234982	3300014745	Miscanthus Rhizosphere	LNGRAVMALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGD*
Ga0173483_101089671	3300015077	Soil	DRGLDLNGRAVAALAEEVRTVDRQLALERGLDDLKAQAKGLPHVSEALTAMRATPDVAWRAYACSLLAEELGAG*
Ga0132255_1001752651	3300015374	Arabidopsis Rhizosphere	EDEGHGASRRALLLLTAGGDPDRGLDLNGRAVTALAEEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG*
Ga0184612_101541763	3300018078	Groundwater Sediment	DEDEAHGAARRALLLLSAGGDPERGLDLHGRAVSAMADDLRTVDRQIALEEGLKQLRVQAEGLAHVSEALHGLVDAPDVAWRAYSAGLLAQALAED
Ga0190265_113412361	3300018422	Soil	RGLDLHGRAVTALADDLRTVDRQLALEEGVRQLRIEAAGLAHVSEALHALTDTPDVAWRAYAAGLLAEELGGEPS
Ga0190275_103841182	3300018432	Soil	GLDLHGRAVTALADDLRTVDRQLALEAGVRQLRVEAAGLAHVSEALHALAETPDVAWRAYAAALLAEELGGDD
Ga0190269_102815371	3300018465	Soil	LDLNGRAVTALAEEVRTVDRQLALERGLDDLKAQAKGLPHVSEALTAMRATPDVAWRAYACSLLAEELGAG
Ga0190268_114661121	3300018466	Soil	ERGLDLNGRAVTAMADELRTVDRQLALEQGLIDLRFLAEGLPHTSEAVHGLMHAPDMAWRAYAAGLLAEELGGVDD
Ga0193741_11506961	3300019884	Soil	PAVSELAEELRDIDRQIILETGFRELAAQSKGLPHVSEALHGLMHAPDIGWRAYACSLLAEDLAGE
Ga0193697_10125551	3300020005	Soil	AVAALADELRTVDRQLALEAGLNELAAQAKGLPHVSEALHGLMHAPEVAWRAYAASLLADELGGDE
Ga0196964_103035511	3300020202	Soil	LHGRAVGSLADDLRTVDRQIALEHGVQALREQASGLPHVSEVVQALIAAPDVAWRAYACSLLAEELAEDD
Ga0222623_100578032	3300022694	Groundwater Sediment	AGGDPERGLDLNGRAVGSLADDLRTVDRQLTLERGIGELKVQARDLPHVLEAVKALGATPDVAWRAYACSLLAEELAGEE
Ga0222623_103892671	3300022694	Groundwater Sediment	VGIDEDEAHGASRRALLLLASGGDPERGLDLNGRAVTALAEEVRTVDRQLALDQGLDELKAQAKGLPHVSEAVAALRATPDVAWRAYACSLLAEELGAD
Ga0222622_105565871	3300022756	Groundwater Sediment	LDLNGRAVSALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTALRATPDVAWRAFACSLLAEELGAG
Ga0247746_11375721	3300022886	Soil	RRALLLLTAGGDHDRGLDLNGRAVTALADEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG
Ga0247752_10631101	3300023071	Soil	VLASVAGQGIQIAEDEAHGASRRALLLLTAGGDPDRGLDLNGRAVTALADEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG
Ga0209751_101957911	3300025327	Soil	RSALLLLVAGGDPSRGLDLNGRAVTALAEELDAPDRRAALARGLEELRAEASGLAHVSEALHALAEEPEIAWRAFACSLLAGEFDED
Ga0207647_102015621	3300025904	Corn Rhizosphere	DEAHGAGRRALLLLTASGDPDRGLDLNGRAVAALADEVRTVDRQLALERGLDELKAQAKGLSHVSEALAALRATPDVAWRAYACSLLAEELGAE
Ga0207662_106183581	3300025918	Switchgrass Rhizosphere	ALLLLTAGGDPDRGLDLNGRAVNALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGD
Ga0207652_100984631	3300025921	Corn Rhizosphere	GLDLNGRAVTALADEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG
Ga0207681_104845473	3300025923	Switchgrass Rhizosphere	VLASVAGQEVRIDEDEEHGASRRALLLLTAGGDPDRGLDLNGRAVMALAEEVRTVDRQLALESGLDELKADAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGD
Ga0207687_100995423	3300025927	Miscanthus Rhizosphere	EDEEHGASRRALLLLTAGGDPDRGLDLNGRAVTALADEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG
Ga0207711_101059463	3300025941	Switchgrass Rhizosphere	LNGRAVMALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGA
Ga0207677_101539511	3300026023	Miscanthus Rhizosphere	DRGLDLNGRAVMALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGAG
Ga0208419_10443951	3300026032	Natural And Restored Wetlands	NGRAVAALADELRDVDRQRALEDGLRDLRQDSTGLPHVSEAVRALLAAPDIAWRAYAASLLVEDLEGDDE
Ga0207703_115375201	3300026035	Switchgrass Rhizosphere	GGDPDRGLDLNGRAVMALAEEVRTVDRQLALESGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGA
Ga0209059_11601242	3300026527	Soil	HVPLDEDDRRGAVRRALLLLTAGGDPSRGLDLDGRAVRALASDLDEPARREALGAALVELSAEAEGLPHVSEALHGLTDAPDVAWRAYACSLLARELGEED
Ga0208890_10462411	3300027523	Soil	TGGLDFHGRAVTAMADELRTVDRQLALEDGIRQLRVEASGLPHVSEAVHALADTPDVAWRAYAASLLAEELAGD
Ga0209887_10000671	3300027561	Groundwater Sand	PDRGLDLDGRAVTALADDLRTVDRQLALEQGLVALRLQVQGLPHASEAVHGLIDAPDVAWRAYAAGLLAEELGGVDD
Ga0209887_10607332	3300027561	Groundwater Sand	DPDEAHGAARRALLLLSTGGDPDRGLDLHGRAVGSLADDLRTVDRQIALEEGLRQLRLQAEGLPHVSEALHGLIDAPDVAWRAYAAGLLAQALGEADS
Ga0209819_101180201	3300027722	Freshwater Sediment	PDRGLDLHGRAVGSIADDLRTVDRQIALEEGLKEIRLQAEGLPHVSEALHGLLDAPDVAWRAYAAGILAQALGED
Ga0307291_10642321	3300028707	Soil	ADDLRTVDRQLTLERGIGELKVQARDLPHVLEAVKALGATPDVAWRAYACSLLAEELAGE
Ga0307295_100226121	3300028708	Soil	DLNGRAVTALAEEVRTVDRQLALDQGLDELKAQAKGLPHVSEAVAALRATPDVAWRAYACSLLAEELGAD
Ga0307298_100965822	3300028717	Soil	ASVAGEEIQIDEDEAHGASRRALLLLTAGGDPDRGLDLNGRAVSALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTALRATPDVAWRAFACSLLAEELGAG
Ga0307317_100026961	3300028720	Soil	LDLNGRAVSALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTAMRATPDVAWRAYACSLLAEELGAG
Ga0307318_102845531	3300028744	Soil	DPDRGLDLNGRAVSALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTALRATPDVAWRAFACSLLAEELGAG
Ga0307316_100502371	3300028755	Soil	GRAVSALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTALRATPDVAWRAFACSLLAEELGAG
Ga0307316_103468562	3300028755	Soil	AAGGDPARGLDLNGRAVASIADELRTVDRQLALEAGINELAAQAKGLPHVSEALHGLMHAPEVAWRAYAASLLADELGGDE
Ga0307288_102911832	3300028778	Soil	DLYGRAVASIADELRTVDRQLALEAGINELAAQAKGLPHVSEALHGLMHAPEVAWRAYAASLLADELGGDE
Ga0307288_104940512	3300028778	Soil	SVAGVGVQIGEDEAHGASRRALLLLTAGGDPDRGLDLNGRAVSALAEEVRTVDRQLSLESGLDELKAQAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGAG
Ga0307292_103715242	3300028811	Soil	DLNGRAVTTLAEEVRTVDRQLALERGLDELKAGAKGLPHVSEALTAMRATPDVAWRAYACSLLAEELGAG
Ga0307286_100682292	3300028876	Soil	SLADDLRTVDRQLTLERGIGELKVQARDLPHVLEAVKALGATPDVAWRAYACSLLAEELAGEE
Ga0307277_103916411	3300028881	Soil	ARRALLLLAAWGDPERGLDLNGRAVGSLADDLRTVDRQLTLERGIGELKVQARDLPHVLEAVKALGATPDVAWRAYACSLLAEELAGEE
Ga0247826_103945121	3300030336	Soil	LSAGGDPERGLDLHGRTVTAVADDLRTVDRQLALEDGLKQLRLQAEGLPHVSEALHGLAEAPDVAWRAYAAGILAQAFGEDDE
Ga0247826_108170381	3300030336	Soil	SVAGQEVQIDEDEEHGASRRALLLLTAGGDPDRGLDLNGRAVTALADEVRTVDRQLALERGLDELKAEAKGLAHVSEALTALRATPDVAWRAYACSLLAEELGG
Ga0307413_108979641	3300031824	Rhizosphere	LTAGGYPDRGLDLNGRAVMALAEEVRTVDRQLALERGLDELKAEAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGAS
Ga0307407_100867572	3300031903	Rhizosphere	LASVAGQEIQIEEEEAHGASRRALLLLTAGGDPDRGLDLNGRAVTALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGAS
Ga0307416_1038224512	3300032002	Rhizosphere	LASVAGQEIQIEEDEAHGASRRALLLLTAGGDPDRGLDLNGRAVIALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTAMRATPDVAWRAYACSLLAEELGAG
Ga0310897_106171902	3300032003	Soil	HGASRRALLLLTAGGDPDRGLDLNGRAVTALAEEVRTVDRQLALERGLDELKAEAKGLAHVSEALSALRATPDVAWRAYACSLLAEELGG
Ga0307414_100511731	3300032004	Rhizosphere	DPERGLDLDGRAVTALADDLRTVDRQLALEQGLVALRLQVQGLPHASEAVHGLIDAPDVAWRAYAAGLLAEELGGVDGG
Ga0307411_119382241	3300032005	Rhizosphere	GASRRALLLLTAGGDPDRGLDLNGRAVVALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGAG
Ga0310906_111815142	3300032013	Soil	LLSTGGDPGRGLVLHGRAVTAMAEDLRTVDRQIALEEGLKQVRLQAEGLPHVSEALHGLVEAPDVAWRAYAAGILAQALGED
Ga0310896_108561592	3300032211	Soil	EIQIEEDEAHGASRRALLLLTAGGDPDRGLDLNGRAVTALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTAMRATPDVAWRAYACSLLAEELGAG
Ga0247829_100772103	3300033550	Soil	LNGRAVMALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGAG
Ga0247829_101678252	3300033550	Soil	AGQEVQIDEDEEHGASRRALLLLTAGGDPDRGLDLNGRAVTALAEEVRTVDRQLALERGLDELKAEAKGLAHVSEALRALRATPDVAWRAYACSLLAEELGG
Ga0247830_101000132	3300033551	Soil	RALLLLTAGGDPDRGLDLNGRAVMALAEEVRTVDRQLALERGLDELKAAAKGLPHVSEALTALRATPDVAWRAYACSLLAEELGAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065866

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences