Metagenome / Metatranscriptome Family F065929

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065929
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	78 residues
Representative Sequence	ALAAIQERAREVIEGAPAALLFTAVAFQARLGVVGAPRTDVEALTAGTLEGPIFPAQRMDVGLTRFGVEEVVEIRHNRHG
Number of Associated Samples	73
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.83 %
% of genes near scaffold ends (potentially truncated)	77.95 %
% of genes from short scaffolds (< 2000 bps)	93.70 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.063 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (32.283 % of family members)
Environment Ontology (ENVO)	Unclassified (43.307 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.394 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 0.00% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF13614	AAA_31	1.57
PF12762	DDE_Tnp_IS1595	1.57
PF03400	DDE_Tnp_IS1	1.57
PF01797	Y1_Tnp	1.57
PF04015	DUF362	0.79
PF02321	OEP	0.79
PF13229	Beta_helix	0.79
PF01526	DDE_Tnp_Tn3	0.79
PF01610	DDE_Tnp_ISL3	0.79
PF04221	RelB	0.79
PF03972	MmgE_PrpD	0.79
PF13340	DUF4096	0.79
PF02416	TatA_B_E	0.79
PF01527	HTH_Tnp_1	0.79
PF00072	Response_reg	0.79
PF04365	BrnT_toxin	0.79
PF01555	N6_N4_Mtase	0.79
PF00496	SBP_bac_5	0.79
PF00293	NUDIX	0.79
PF13482	RNase_H_2	0.79
PF13610	DDE_Tnp_IS240	0.79
PF13435	Cytochrome_C554	0.79
PF01656	CbiA	0.79
PF16363	GDP_Man_Dehyd	0.79
PF00011	HSP20	0.79
PF15738	YafQ_toxin	0.79
PF01609	DDE_Tnp_1	0.79
PF07978	NIPSNAP	0.79
PF13333	rve_2	0.79
PF00872	Transposase_mut	0.79
PF00005	ABC_tran	0.79
PF07592	DDE_Tnp_ISAZ013	0.79
PF13522	GATase_6	0.79
PF00528	BPD_transp_1	0.79
PF13551	HTH_29	0.79
PF00239	Resolvase	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.57
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	1.57
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.57
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.79
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.79
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.79
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.79
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	0.79
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.79
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.79
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.79
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.79
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.79
COG3077	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	Defense mechanisms [V]	0.79
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.79
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.79
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.79
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.79
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.79
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.79
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.79
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.06 %
Unclassified	root	N/A	3.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.06 %
Unclassified	root	N/A	3.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.06 %
Unclassified	root	N/A	3.94 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	75.59 %
Unclassified	root	N/A	3.94 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	1.57 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.57 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	74.02 %
Unclassified	root	N/A	3.94 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	1.57 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.57 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.79 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	74.02 %
Unclassified	root	N/A	3.94 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1.57 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.79 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.79 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.79 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	74.02 %
Unclassified	root	N/A	3.94 %
unclassified Patescibacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group	0.79 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.79 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.79 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.79 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	74.02 %
Unclassified	root	N/A	3.94 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.79 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.79 %
Patescibacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	0.79 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.79 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	74.02 %
Unclassified	root	N/A	3.94 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.79 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.79 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.79 %
Patescibacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	0.79 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	74.02 %
Unclassified	root	N/A	3.94 %
unclassified Ktedonobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter	0.79 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.79 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.79 %
Patescibacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	0.79 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	74.02 %
Unclassified	root	N/A	3.94 %
Ktedonobacter sp. 13_1_40CM_4_52_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_40CM_4_52_4	0.79 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.79 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.79 %
Patescibacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	0.79 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_101016960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3115	Open in IMG/M
3300003659\|JGI25404J52841_10136949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	518	Open in IMG/M
3300004633\|Ga0066395_10598862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	646	Open in IMG/M
3300004633\|Ga0066395_11018498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	506	Open in IMG/M
3300005289\|Ga0065704_10779419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	532	Open in IMG/M
3300005332\|Ga0066388_102426966	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300005332\|Ga0066388_102565971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	927	Open in IMG/M
3300005332\|Ga0066388_106763839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	577	Open in IMG/M
3300005455\|Ga0070663_100916510	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005549\|Ga0070704_101949016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	545	Open in IMG/M
3300005713\|Ga0066905_102187363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	516	Open in IMG/M
3300005764\|Ga0066903_103540499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	841	Open in IMG/M
3300005764\|Ga0066903_106492035	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300005764\|Ga0066903_106508957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	609	Open in IMG/M
3300005764\|Ga0066903_108311330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	530	Open in IMG/M
3300005981\|Ga0081538_10147594	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300005983\|Ga0081540_1032409	All Organisms → cellular organisms → Bacteria	2854	Open in IMG/M
3300005985\|Ga0081539_10316186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	666	Open in IMG/M
3300006049\|Ga0075417_10047993	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300006194\|Ga0075427_10073739	Not Available	611	Open in IMG/M
3300006845\|Ga0075421_100284870	All Organisms → cellular organisms → Bacteria	2014	Open in IMG/M
3300006845\|Ga0075421_100643021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1241	Open in IMG/M
3300006845\|Ga0075421_101512808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	734	Open in IMG/M
3300006854\|Ga0075425_100367591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1656	Open in IMG/M
3300006854\|Ga0075425_101313735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	820	Open in IMG/M
3300006880\|Ga0075429_101588986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	568	Open in IMG/M
3300006881\|Ga0068865_100970296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	743	Open in IMG/M
3300006904\|Ga0075424_102864939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	502	Open in IMG/M
3300009012\|Ga0066710_100951992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1323	Open in IMG/M
3300009094\|Ga0111539_11819763	Not Available	706	Open in IMG/M
3300009094\|Ga0111539_11921159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	686	Open in IMG/M
3300009094\|Ga0111539_13464877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	507	Open in IMG/M
3300009100\|Ga0075418_10027376	All Organisms → cellular organisms → Bacteria	6228	Open in IMG/M
3300009100\|Ga0075418_10399196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1470	Open in IMG/M
3300009100\|Ga0075418_10468344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1350	Open in IMG/M
3300009100\|Ga0075418_10623811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1160	Open in IMG/M
3300009100\|Ga0075418_10738301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1062	Open in IMG/M
3300009100\|Ga0075418_12270856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	592	Open in IMG/M
3300009100\|Ga0075418_12726373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	540	Open in IMG/M
3300009100\|Ga0075418_13104781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	506	Open in IMG/M
3300009146\|Ga0105091_10771753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	509	Open in IMG/M
3300009147\|Ga0114129_10271539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2268	Open in IMG/M
3300009147\|Ga0114129_10906090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1117	Open in IMG/M
3300009147\|Ga0114129_12377371	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	635	Open in IMG/M
3300009147\|Ga0114129_12447248	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300009156\|Ga0111538_10306826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2008	Open in IMG/M
3300009162\|Ga0075423_10141056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2529	Open in IMG/M
3300009162\|Ga0075423_10679642	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300009162\|Ga0075423_10940644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	917	Open in IMG/M
3300009162\|Ga0075423_12870900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	528	Open in IMG/M
3300009551\|Ga0105238_12905009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	515	Open in IMG/M
3300009553\|Ga0105249_11309198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	796	Open in IMG/M
3300009789\|Ga0126307_11303138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	588	Open in IMG/M
3300009792\|Ga0126374_11542950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	546	Open in IMG/M
3300009837\|Ga0105058_1061162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	852	Open in IMG/M
3300010041\|Ga0126312_10936736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	632	Open in IMG/M
3300010043\|Ga0126380_10020775	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	3150	Open in IMG/M
3300010043\|Ga0126380_10237080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1252	Open in IMG/M
3300010043\|Ga0126380_10377268	Not Available	1044	Open in IMG/M
3300010043\|Ga0126380_10932519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	724	Open in IMG/M
3300010043\|Ga0126380_11336228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	626	Open in IMG/M
3300010043\|Ga0126380_12117480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	518	Open in IMG/M
3300010046\|Ga0126384_10246100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1442	Open in IMG/M
3300010046\|Ga0126384_10803957	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300010046\|Ga0126384_11316620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	671	Open in IMG/M
3300010046\|Ga0126384_11457158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	640	Open in IMG/M
3300010046\|Ga0126384_11577261	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	617	Open in IMG/M
3300010046\|Ga0126384_11687808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	599	Open in IMG/M
3300010046\|Ga0126384_11876729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	570	Open in IMG/M
3300010047\|Ga0126382_10637502	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300010358\|Ga0126370_10101121	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300010358\|Ga0126370_11221295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	700	Open in IMG/M
3300010358\|Ga0126370_11363092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	668	Open in IMG/M
3300010358\|Ga0126370_12419615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	522	Open in IMG/M
3300010359\|Ga0126376_11364401	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300010360\|Ga0126372_10256305	Not Available	1505	Open in IMG/M
3300010361\|Ga0126378_12158564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	635	Open in IMG/M
3300010361\|Ga0126378_12862331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	551	Open in IMG/M
3300010362\|Ga0126377_10355414	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300010362\|Ga0126377_10513657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1232	Open in IMG/M
3300010362\|Ga0126377_10922058	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300010362\|Ga0126377_13045702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	541	Open in IMG/M
3300010366\|Ga0126379_12622508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	601	Open in IMG/M
3300010373\|Ga0134128_11880759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	659	Open in IMG/M
3300010375\|Ga0105239_10670492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1185	Open in IMG/M
3300010375\|Ga0105239_13550743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	507	Open in IMG/M
3300010376\|Ga0126381_103531994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	614	Open in IMG/M
3300010376\|Ga0126381_103920689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	580	Open in IMG/M
3300010398\|Ga0126383_11461216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	773	Open in IMG/M
3300010399\|Ga0134127_13545451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	511	Open in IMG/M
3300010401\|Ga0134121_12877329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	528	Open in IMG/M
3300010863\|Ga0124850_1058696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1193	Open in IMG/M
3300010868\|Ga0124844_1311346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	525	Open in IMG/M
3300012208\|Ga0137376_11042141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	700	Open in IMG/M
3300012209\|Ga0137379_11072488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	711	Open in IMG/M
3300012211\|Ga0137377_10246797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1715	Open in IMG/M
3300012211\|Ga0137377_11652041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	563	Open in IMG/M
3300012357\|Ga0137384_10607776	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	892	Open in IMG/M
3300012513\|Ga0157326_1045952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_40CM_4_52_4	627	Open in IMG/M
3300012897\|Ga0157285_10163154	All Organisms → cellular organisms → Bacteria → Terrabacteria group	673	Open in IMG/M
3300012948\|Ga0126375_10544159	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	875	Open in IMG/M
3300012948\|Ga0126375_10577671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	854	Open in IMG/M
3300012948\|Ga0126375_11246707	Not Available	621	Open in IMG/M
3300012948\|Ga0126375_11579937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	564	Open in IMG/M
3300012971\|Ga0126369_11699217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	720	Open in IMG/M
3300012971\|Ga0126369_12099576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	653	Open in IMG/M
3300012971\|Ga0126369_12472027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	605	Open in IMG/M
3300012971\|Ga0126369_12477598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	604	Open in IMG/M
3300012971\|Ga0126369_13098635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	544	Open in IMG/M
3300012971\|Ga0126369_13102149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	544	Open in IMG/M
3300013308\|Ga0157375_10250432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1932	Open in IMG/M
3300014487\|Ga0182000_10501539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	564	Open in IMG/M
3300015371\|Ga0132258_11208997	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300015372\|Ga0132256_100410117	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1458	Open in IMG/M
3300015373\|Ga0132257_100987232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1059	Open in IMG/M
3300015374\|Ga0132255_104000026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	626	Open in IMG/M
3300015374\|Ga0132255_105373665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	542	Open in IMG/M
3300016357\|Ga0182032_11941470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	516	Open in IMG/M
3300016445\|Ga0182038_11293412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	652	Open in IMG/M
3300027909\|Ga0209382_10550268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1264	Open in IMG/M
3300028381\|Ga0268264_11080420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	810	Open in IMG/M
3300028587\|Ga0247828_10376777	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300031421\|Ga0308194_10160738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	700	Open in IMG/M
3300031720\|Ga0307469_11927752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	573	Open in IMG/M
3300031736\|Ga0318501_10282196	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → unclassified Patescibacteria group → Patescibacteria group bacterium	884	Open in IMG/M
3300032063\|Ga0318504_10448087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	617	Open in IMG/M
3300032174\|Ga0307470_10842415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	715	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.42%
Host-Associated	Host-Associated	38.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.63%
Plants	Host-Associated → Plants	38.58%
Aquatic	Environmental → Aquatic	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.66%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	27.56%
Loam	Environmental → Terrestrial → Soil → Loam	10.24%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.57%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Sand	Environmental → Terrestrial → Soil → Sand	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	27.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	32.28%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	23.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.15%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.36%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.57%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1010169601	3300000955	Soil	DRALAAVQERSREVIESALAVLLLTAIAFQSGLVVVGTPRTNVVALTPRTLKGPIFPSQRMDVRLTRFDVEELVEMRKNAHG*
JGI25404J52841_101369491	3300003659	Tabebuia Heterophylla Rhizosphere	VGEGALTAVQEGACEVIEGALAGLLFTAVALQARLVVIGPPGTNIVALTSGTLEGTILPPQRMDVRLTLVDVEELVNV*
Ga0066395_105988621	3300004633	Tropical Forest Soil	PRCTREAQQKRGENPMPQRALAAIQQRAREVVEGALATLLFTAVALQARLVMVRPPRTDVVALTAGTLEWALLPPQRMDVGLTRCGVEELVEMRHNRHG*
Ga0066395_110184981	3300004633	Tropical Forest Soil	AVQEGAREVIEGALAGLLFTAVALQARLVVICPPGTNIVALTAGTLEGTIFPPQRMDVGLTLVDVEELVNG*
Ga0065704_107794191	3300005289	Switchgrass Rhizosphere	RALAAVQECSREVIAGALAGLLLTAVAFQAGLVVVGAPRTDVVALTPRTLEGPILPAQPMDVGLTRFEVEEVVQMRDHRHG*
Ga0066388_1024269662	3300005332	Tropical Forest Soil	VAEGALAAVQEGAREVIEGALAGLLFTAVALQARLVVICPPGTNIVALTAGTLEGTIFPPQRMDVGLTLVDVEELVNG*
Ga0066388_1025659711	3300005332	Tropical Forest Soil	VHERALAAIQEHACMVIEGTLAGVLFTAVAFQSRLIVVRAPGTDVVALTARTLEWTIFPPQHMNTKWTRFGVEELVQMRHNRYG*
Ga0066388_1067638392	3300005332	Tropical Forest Soil	VCEGALAAVQERAREVIKGALATLRFAAVALQARLGVVGAPGPDIEALTAGTLEGPIFPAQRMDVGLTRF
Ga0070663_1009165102	3300005455	Corn Rhizosphere	ALAAIQERAREVIEGALAGLLFTAVALQARLVVIRAPGADVVALTSGALQEPIFPAQRMDVCLARFGASILGSAIWHP*
Ga0070704_1019490161	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ALAAIQERAREVIEGAPAALLFTAVAFQARLGVVGAPRTDVEALTAGTLEGPIFPAQRMDVGLTRFGVEEVVEIRHNRHG*
Ga0066905_1021873631	3300005713	Tropical Forest Soil	VHERALAAIQERACKVIEGALAGVLFTAVAFQSRLIVVRAPGTDVVALTGRTLEWAIFPPQRMNIKWTRFGVEELVQMRHNRYG*
Ga0066903_1035404991	3300005764	Tropical Forest Soil	VRQGPLAAVQERAGEVIEGAFAALLFATVALQSGLGVVRAPRADVETLAAGALEGPIFPAQRMDVGLTRSLNLSLFVEG*
Ga0066903_1064920352	3300005764	Tropical Forest Soil	FTAVALQPGLVVVRAPRTDVVALTPRTLEGPIFPAQPMDVGLTRCGVEKLVQMRHYRHG*
Ga0066903_1065089571	3300005764	Tropical Forest Soil	EKSGENPMPQRALAAIQQRAREVIEGALATLLLAAIAFQTRLGVLGAPGPDVVALTPRTLEGPLFPAQRMDGGLTRFGVEEVVEMRHNRHS*
Ga0066903_1083113301	3300005764	Tropical Forest Soil	MHTRALAAVQERAREVIEGALAGLLFTAVALQAGLVVVRAPRANIVALTPRTLEGLIFPAQHMDVRLTRFGVEEVVQMRHNRHGWASPVITGSVKNRI
Ga0081538_101475941	3300005981	Tabebuia Heterophylla Rhizosphere	QNPVHDRALAAVQERTREVIEGALAALLFTAVALQAWLGMVRAPWSDVEALTAGTLEGPIFPAQRMDVGLTRCGVEEMVEMRHHRHG*
Ga0081540_10324091	3300005983	Tabebuia Heterophylla Rhizosphere	HHRALAAIQERTREVIEGALAALLFTAVALQAWLGMVRAPWSDVEALTAGTLEGPIFPAQRMDGGLTRFGVEEVVEMRHHRHG*
Ga0081539_103161862	3300005985	Tabebuia Heterophylla Rhizosphere	VRQGALAAVEQGAGEVLEGARAALRFTAGAFQAGLGVVRAPWSDGEALTAGTLEGPIFSAQRMDVRLTRVGVEELVQMRHHRHAEYLLSSRVR*
Ga0075417_100479932	3300006049	Populus Rhizosphere	VCEGALAAVQEGTREVMEGALAGLLFTAVALQARLVVICPPGTNMVALTSGTLEGTIFPPQRMDVCLTLIDVEELVHV*
Ga0075427_100737392	3300006194	Populus Rhizosphere	VIEGALAALLFTAVALQARLVVICPPGTNMVALTSGTLAGTIFPPQRMDVCLTLVDVEELVNV*
Ga0075421_1002848701	3300006845	Populus Rhizosphere	GENPVHHRALAAIQERTSEVIEGALADFLFTAVAFESGLIVVRAPGTDVVALTPGTLQRAIFPPERMDVGLTLVDIEELVNVRKHRHG*
Ga0075421_1006430211	3300006845	Populus Rhizosphere	QERTREVIEGALAALLFTAVAFQAWLGVVGAPGTDVVALTAGTLEGPIFPPECMDVRLALCETEEVMDI*
Ga0075421_1015128081	3300006845	Populus Rhizosphere	HDRALAAVQERAREVIESALAVLLLTAIAFQSGLVVVGTPRTNVVALTPRTLKGPIFPSQRMDVRLTRFDVEELVEMRKNAHG*
Ga0075425_1003675911	3300006854	Populus Rhizosphere	EKSGQNPVHHRALAAIQECAREVIEGALAALLFAAVAFQARLGVVGAPGTDVEALTAGTLEGPIFPAQRMDVALTRFGVEEVVECDTIDMAEFLL*
Ga0075425_1013137352	3300006854	Populus Rhizosphere	RGTRQAQQKRREHPVHDRALAAVQQRAREVIEGALAGLLFTPVALQAGLVVVRAPGTDVVALTAGTLEWAIFPPQCMDIRLTRFGAEELVQMRHHRHG*
Ga0075429_1015889861	3300006880	Populus Rhizosphere	VPKSGQNPVHHRALAAIQECAREVIEGALAALLFAAVAFQARLGVVGAPGTDVEALTAGTLEGPIFPAQRMDVALTRFGVEEVVECDTIDMAEFLL*
Ga0068865_1009702962	3300006881	Miscanthus Rhizosphere	AREVIEGALAGLLFTAVALQSRLVVICPPGTNMVALTSGTLEGTIFPPQRMDVCLTLVDVEELVNV*
Ga0075424_1028649392	3300006904	Populus Rhizosphere	AVAFQARLGVVGASGTDVETLTARTLEGPIFPPQHMDIRSTRFGVEELVQMRHKRHG*
Ga0066710_1009519923	3300009012	Grasslands Soil	VRQRALAAVQERAREIIEGALAVLLFTAVAFQSGLVVIDAPGTDVVALTSGALQGPIFPAQRMDIRVTRFGVAELVKMLHDRHG
Ga0111539_118197632	3300009094	Populus Rhizosphere	CEVIEGALAGLLFTAVALQSRLVVICPPETNMVALTSGTLEGTIFPPQRMDVGLTLVDVEELVDVCEHRHR*
Ga0111539_119211592	3300009094	Populus Rhizosphere	KSGQNPVHHRALAAIQECAREVIEGALAALLFAAVAFQARLGVVGAPGTDVEALTAGTLEGPIFPAQRMDVALTRFGVEEVVECDTIDMAEFLL*
Ga0111539_134648771	3300009094	Populus Rhizosphere	TLAAIQECSREVIEGTLTVLLFTAVALQAGLVVVGAPRTYVVAPTPRTLEGPILPAQPMDVGLTRVGVEEVVQMRVVFQTWI*
Ga0075418_100273764	3300009100	Populus Rhizosphere	VCEGALAAVQEGTREVMEGALAGLLFTAVALQAKLVVICPPGTNMVALTSGTLEGTIFPPQRMDVCLTLIDVEELVHV*
Ga0075418_103991962	3300009100	Populus Rhizosphere	MHDRALAAVQERSREVIESALAVLLLTAIAFQSGLVVVGTPRTNVVALTPRTLKGPIFPSQRMDVRLTRFGVEELVEMRKNAHA*
Ga0075418_104683442	3300009100	Populus Rhizosphere	QRALAAIQQRASKVIEGALAGLLFTAVAFQSRLVVVRTPRTDLVALTARTLEWPIFPPQRMDIGLTRVGVEELV*
Ga0075418_106238111	3300009100	Populus Rhizosphere	NPVGEGALAAVQECAREVIEGALAVLLFTAVALQSRLVVICPPGTNMVALTSGTLEGTILPPQRMDVRLTLVDVEELVKV*
Ga0075418_107383012	3300009100	Populus Rhizosphere	VHERALAAIQERAREVIEGALATLLFAAVAFQARLGVIGTPGPDVVALTPRTLEGPVFPAQRMDVGLTRVGVEEVVEMGHNRHG*
Ga0075418_122708561	3300009100	Populus Rhizosphere	TAVQEGAREVIEGALAGLLFTAVAVQSRLVVIGPPGTNMVALTSGTLEGTILPPQRMDVRLTLVDVEELVNV*
Ga0075418_127263732	3300009100	Populus Rhizosphere	QECACEVIEGALAALLFAAIAFQARLGVVGAPGPDVMALTSRTLERPIFPAQPMDVGLTRFGVEELV*
Ga0075418_131047811	3300009100	Populus Rhizosphere	AAVQERAREVIEGALTVLLFTAVALQAGLVVVGAPRTDVVALTPRTLERPILPAQLMDVGLTRFGVEEVVKMQNNRHG*
Ga0105091_107717532	3300009146	Freshwater Sediment	AREVIEGALAGLLFTAVAFQARLVVICPPGTNIVALTSGTLEGTIFPPQRMDVGLTLVDVEELVNV*
Ga0114129_102715395	3300009147	Populus Rhizosphere	ALAAIQERTREVIEGALAALLFTAVAFQAWLGMVCTPWSDVEALTAGTLEGPIFPAQRMDGGLTGFSVEEVVEMRHNRHG*
Ga0114129_109060902	3300009147	Populus Rhizosphere	VHHRALAATQERTREVIEGALAALLFTAVAFQAWLGVVGAPGTDVVALTAGTLEGPIFPPECMDVRLALCETEEVVDI*
Ga0114129_123773711	3300009147	Populus Rhizosphere	EGREDPVGEGALTAVQEGAREVIEGALAGLLFTAVALQSRLVVICPPGTNIVALTSGTLEGTILPPQRMDVHLTLVDAEELVKV*
Ga0114129_124472481	3300009147	Populus Rhizosphere	IEGALAGLLFTAVALQAGLVVIGTPGTDVVTLTSGALQGAIFPAQYMDIRLTRFGVEEVVQIRHHRHG*
Ga0111538_103068261	3300009156	Populus Rhizosphere	VHHRALAAIQECAREVIEGALAALLFAAVAFQARLGVVGAPGTDVEALTAGTLEGPIFPAQRMDVALTRFGVEEVVECDTIDMAEFLL*
Ga0075423_101410566	3300009162	Populus Rhizosphere	FAAVAFQARLGVVGAPGTDVEALTARTLEGPIFPAQRMDVALTRFGVEEVVECDTIDMAEFLL*
Ga0075423_106796423	3300009162	Populus Rhizosphere	MREIVEGALATLLFAAVAFQARLGVVGAPGPNVVALAPGTLEGTIFPPQRMDVCLALFEAKELVDIGKRRHR*
Ga0075423_109406442	3300009162	Populus Rhizosphere	ERAREVIEGALAVLLFTAVALQSGLVVVGTPRTNVVALTPRTLERPIFPSQRMNVGVTLFGVEELVDVREHWHR*
Ga0075423_128709002	3300009162	Populus Rhizosphere	ALAAVQERSREVIEGALAGLLFTAVALQAGLVVICPPGTDVVALTPRTLEGPIFPAQGMDIGVAGFHTEQLVYM*
Ga0105238_129050092	3300009551	Corn Rhizosphere	AAVQERSREVIEGALAVLLFTTVALQSGLVVIDAPGTDVVALTSGTLEGTIFPPQRMDVGLTLVDIEELVNV*
Ga0105249_113091982	3300009553	Switchgrass Rhizosphere	EGALAALLFAAVAFQARLGVVRAPRADVKTLTAGTLEEPIFPAQRMDVGLTRFRVEEVVEMRHHRHG*
Ga0126307_113031381	3300009789	Serpentine Soil	REVIEGALAVLLFTAVAFQAGLVVVGAPRTNVVALTAGTLEGPIFPAQRMDVGLTRFGVEEGVEMRHHRHG*
Ga0126374_115429501	3300009792	Tropical Forest Soil	GRQNPVHHRALAAIQERTREVIEGALAALLFTAVALQAWLGMVRAPWSDVEALTAGTLEGPIFPAQRMNGGLTRFGVEEMVEMRHHRHG*
Ga0105058_10611622	3300009837	Groundwater Sand	HDRALAAVQERSREVIEGALAILLFTVVAFQAGLVVVGAPRTDVVALTPRTLQRTIFPPQRMDIGLALFGVEELVDIREYWHG*
Ga0126312_109367361	3300010041	Serpentine Soil	MPQRALAAIQQRASQVIEGALATLLFAAVAFQARLGVIGAPGPDAVALTPRTLERTIFPSQRMDVCLALLGVEELVDVGKHRHG*
Ga0126380_100207756	3300010043	Tropical Forest Soil	MPQRALAAIQQRASQVIEGALAGLLFTAVAFQSRLGVVRPPRTDMVALTARTLEWALFPPQRMDIGLTRFGVQEVGEMRHHRQG*
Ga0126380_102370801	3300010043	Tropical Forest Soil	QEEGGKYPVHDRALAAVQERAREVIEGALAGLLFTPVALQSGLIVVGTPRPNVVALTSRTLEGPIFPAQPMDVGLTRFGVEEVVQMRNHRHG*
Ga0126380_103772681	3300010043	Tropical Forest Soil	EGAFAALLFATVTFQSGLGVVRAPRADVETLTAGTLEGPIFPAQRMDISLTRFGVEELVKMRHHRHG*
Ga0126380_109325191	3300010043	Tropical Forest Soil	PVHDRALAAIQERAREVIEGALAALLFTAVALQARLGMVGAPRTNVVALTAGTLEGPIFPAQRMEGGLTRFGVEEVVEMRHHRHG*
Ga0126380_113362281	3300010043	Tropical Forest Soil	RAREVIEGALAALLFTAVAFQAWLGVVGAPGTDGEALTAGTLEGPIFPAQRMDVGLTRFGVEEVVEMGHHRHG*
Ga0126380_121174801	3300010043	Tropical Forest Soil	CTRQAQEKSGQNPAHHRALAAIQECACEVIESAPATLLFAAVAFQALLGVVDAPRTNVVTLTPRTLERPIFPSQRMNVGLTLVGVEELVDV*
Ga0126384_102461001	3300010046	Tropical Forest Soil	AAIQACAREVIEGALAVLLFTAVALQAGLVVVSAPRTNVVALTPRTLERPIFPSQRMNGGLTLFGVEELVDVREHWHG*
Ga0126384_108039573	3300010046	Tropical Forest Soil	AREVIEGALAALLFAAVAFQARLGVVGAPGTDVEALAPGTLQRTIFPPQCMDVGLALFGVEELVDVREHWHR*
Ga0126384_113166203	3300010046	Tropical Forest Soil	EVIEGTLAGLLFTAVALQSGLVVIRAPGADVVALTSGALQGPIFPPQRMDVGVTLVDVKELVDVREYQHG*
Ga0126384_114571581	3300010046	Tropical Forest Soil	MPQRALATIQQRAREIIAGALAGLLFAAVALQPRLVVVRPPRTDMVALTAGALEWAIFPAQRMDRGLTRVGVEEVVEMGHNRHG*
Ga0126384_115772611	3300010046	Tropical Forest Soil	QRASKVIEGALAGLLFTAVALQARLVVIGAPGTNVVALTARTLEWAIFQPQRMDIELPRFGVEELVEMRHHRHG*
Ga0126384_116878082	3300010046	Tropical Forest Soil	ALAAVQERAREVIEGPLAVLFFTAVALQPGLVVVGAPRTDIVTLTPRTLKGPIFPAQRMDVGLTRCGVEEVVQMRNHRHG*
Ga0126384_118767291	3300010046	Tropical Forest Soil	QRALAAIQQRASQVIEGALAVLLFTAVAFQSRLVMVRTPRTDMVALTARTLEWAIFPPQRMDIGLTRFGVEEVVEMRHHRHG*
Ga0126382_106375021	3300010047	Tropical Forest Soil	TEQKGGENPVGEGALAAVQEGAREVIEGALAALLFTAVALQPRLVVVRTPRTDMVALTVGTLEWTLFPPQRMDIGLTRFGVEEVVEMRHNRHG*
Ga0126370_101011213	3300010358	Tropical Forest Soil	EGALTAVQEGAREVIEGALAGLLFTAVALQSRLVVICPPGTNIVALTSGTLEGTILPPQRMDVRLTLVDVEELVKV*
Ga0126370_112212952	3300010358	Tropical Forest Soil	MYDRALAVLLFTAVALQSGLVVVDAPRTDVVAPTLRTWEGPIFPARHMDVRIDTFGGG
Ga0126370_113630922	3300010358	Tropical Forest Soil	ALAVLLFTAVALQSGLVVVGAPRTDVVALTSRTLEGPIFPPQRMDVGVAGLSIEELVEV*
Ga0126370_124196151	3300010358	Tropical Forest Soil	GPLTAVQERAGEIIEGAFAALLFATVPFQSGLGVVRPPRADVATLTAGALEGPIFPAQHMDVGLTRCRVEEVVEMRHHRHG*
Ga0126376_113644011	3300010359	Tropical Forest Soil	AVAFQAWLGMVRAPWSDVEALTAGTLEGPIFPAQRMDGGLTRFGVGEVVEMRHHRHG*
Ga0126372_102563052	3300010360	Tropical Forest Soil	ALAALLFTAVALQARLGVVGAPGTDVVALTAGTLEGPIFPPECMDVRLALCETEEVVDI*
Ga0126378_121585641	3300010361	Tropical Forest Soil	VHERVLAAIQERSREVIEGTLAGLLFTAVALQPGLVVVGAPRTDVVALTPRTLEGPLFPVQRMDIGLTRFGVEEVVQMRNHRHG*
Ga0126378_128623311	3300010361	Tropical Forest Soil	GTRQAQEKRGEHPVHQRALAAIQERAGEVIEGTLAALLFTAVALQARLSVVGAPWSDIEALTAGTLEGSIFPAQRMDVGLTLADIEELVKV*
Ga0126377_103554141	3300010362	Tropical Forest Soil	CEIIEGALAALLFTAVAFQAWLGMVRAPWSDVVALTAGTLEGPLFPAQRMEVGLTRVGVEEVVEMRHHRHG*
Ga0126377_105136573	3300010362	Tropical Forest Soil	MEGALAAPRFTAVALQAWLGMGRAPGADVEALTARTLEGPIFPAQRMDGGLARFGVEEVVELRHHRHG*
Ga0126377_109220581	3300010362	Tropical Forest Soil	EVIEGALATLLFTAVALQAGLVVVGAPGPDVVALTARTLEGPIFPAQRMDIGLTRFGGEEVVEMRHHRHG*
Ga0126377_130457021	3300010362	Tropical Forest Soil	YRALAAVQERAREIIDGALATLLFAAVAFQSGLVVIDAPETDVVALASGALQGPLFPAQRMDIRVTRFGVEELVQMRHDRHG*
Ga0126379_126225082	3300010366	Tropical Forest Soil	VHHRALAAIQERTREVIAGALAALLLTAVALQSGLVVVGSPRTDVKALTAGTLEGPIFPPECIDVRLSLCETEEVVDI*
Ga0134128_118807592	3300010373	Terrestrial Soil	MEGARAALLFTAVALQARLGVVDAPGTDAEALTAGTLEGPIFPAQRMDGGLTRFGVEEVVEMRHNRHG*
Ga0105239_106704922	3300010375	Corn Rhizosphere	EGAREVIEGALAALLFAAVAFQARLGVVGAPRTDVVALTARTLEWAIFPPQRMDIGLTRFGVEEVVEMRHHRHG*
Ga0105239_135507431	3300010375	Corn Rhizosphere	QKRREHPVHDRALAAVQQRAREGMEGALATLLFTAVALQAGLVVVGAPGTDVVALTPRTLEGAIFPAQPMEVRLTRVGVEEVVQM*
Ga0126381_1035319942	3300010376	Tropical Forest Soil	AVEQGRGEVIEGALAALLFTAVAFQAWLGVVGAPGADVEALTAGTLEGSIFPAQRMDVGLTLADIEELVKV*
Ga0126381_1039206891	3300010376	Tropical Forest Soil	EGALAGLLFTAVALPSRLVVICPPGTNMVALTSGALQGTIFPPQRMDVRLALVDVEELVKV*
Ga0126383_114612161	3300010398	Tropical Forest Soil	MECTTQEKGGEHPGRQGPLAAVQERAGEVIAGACAALLFATGTFQSGLGVVRAPRAEVETLTAGALEGPIFPAPHMDGGLPRFRVEEVVEMRHH
Ga0134127_135454511	3300010399	Terrestrial Soil	KSGQNPVHDRALAAVQERACEVIEGALATLLFAAAAFQARLGVVGAPGPDVVALTPRTLEGPIFPAQSMDVGLTRFGVEELVQMRNHRHG*
Ga0134121_128773291	3300010401	Terrestrial Soil	DPVHDRALAAVQERSREIIEGALAGLLFTAVAFQPWLVVVRPPRTDVVALTAGTLEGALFPPQRMDIGLTRCGVEEVVEMRHNRHG*
Ga0124850_10586963	3300010863	Tropical Forest Soil	MCLATAKSGLTVLRFTAVALQSGLVVVGTPRTDVVALTPRTLEEPIFPAQRMDIGLTRVGVEKVVQMRH
Ga0124844_13113461	3300010868	Tropical Forest Soil	MPQRALAAIQQRASQVIEGALAVLLFTAVAFQSRLGVVRTPRTDMVALTARTLEWALFPPQRMDIGLTRFGVQEVVEMRHNRHG*
Ga0137376_110421411	3300012208	Vadose Zone Soil	LALVQHRAGEIIEGALAVFAAVAVQSRLVMVCAPETDVVALTSGALQRTVFPAQRMNVGLTSFGVEELV*
Ga0137379_110724881	3300012209	Vadose Zone Soil	ALAVLLSTAVALQARLVVVRPPRTDVVALTAGTLEWALVPPQRMAIALTRFGVAEVVEMRHHRHG*
Ga0137377_102467971	3300012211	Vadose Zone Soil	PLALVQHRAGEIIEGALAVFAAVAVQSRLVMVCAPETDVVALTSGALQRTVFPAQRMNVGLTSFGVEELV*
Ga0137377_116520411	3300012211	Vadose Zone Soil	VMEGALAALLFAAVAFQARLGVVGAPGSDVEALTAGTLEGPIFPAQHMDVGLARFGVEEVVEMRHNRHG*
Ga0137384_106077762	3300012357	Vadose Zone Soil	QECAREVIEGALAALLFAAVAFQARLGVVGAPGSDVEALTAGTLEGPIFPAQHMDVGLARFGVEEVVEMRHNRHG*
Ga0157326_10459521	3300012513	Arabidopsis Rhizosphere	MHERALAAIQERAREVIEGALAALLFTAVAFQARLGVVGAPGPDVVAVTAGTLERSIFPAQRMNVGLTLFGVEELVDVREHW
Ga0157285_101631541	3300012897	Soil	SKVIEGALAVLLFTAVALQSGLVVVRAPRTDVVALTARTLEWAIFPPQRMDIGLTRFGVEEVVEMRHNRHG*
Ga0126375_105441592	3300012948	Tropical Forest Soil	VHDRELAAIQERAREVMEGAPAILLFTAVALQAGLVVVGTPRTDVVALTPRTLEGPILPAQGMDGGVTLVSVEELVDV*
Ga0126375_105776712	3300012948	Tropical Forest Soil	LPVHERALAAVHERAGEVMEGALAGVLFPAVALQCGLVVVRAPGTDVVALTAGTLEWAIFPPQRMDIRLTRFGVEELVQMRHNRHG*
Ga0126375_112467072	3300012948	Tropical Forest Soil	LAALLFTAVAFQAWLGMVRAPGADVETLTAGTLEGPILPAQRMDIGLTRFGVEEVVEMRHHRHG*
Ga0126375_115799371	3300012948	Tropical Forest Soil	MEQGRGEVIEGALAALLFTAVAFQAWLGVVGAPGADVEALTAGTLEGAIFPAQRMDVGLTLADIEELVKV*
Ga0126369_116992171	3300012971	Tropical Forest Soil	ACEVIEGALAGLLFTAVAFQTGLVVVRAPGTDVVTLTAGTLEWAIFPPQRMDGGLTRFGVEEVV*
Ga0126369_120995761	3300012971	Tropical Forest Soil	AQQEGGQNPVGEGALAAVQKGASEVIEGACAVLLFTAVALQSRLVVIGPPGTNMVALTAGTLEGTIFPPQRMDVRLTLVDVEELVKV*
Ga0126369_124720272	3300012971	Tropical Forest Soil	VQERAREVIEGALAGLLFTAVALQAGLVVGGAPRTDIVALTPRTLEGPIFPAQRMDVGLTRYGV*
Ga0126369_124775982	3300012971	Tropical Forest Soil	VHDRALAAIQERAREVIEGALAVLLFTAIALQARLVVVGAPGTDVEALTPRTLEGPIFPPECMDVGLTLVDVEELIKVREYWHG*
Ga0126369_130986351	3300012971	Tropical Forest Soil	MPQRALAAIQQRAREVIAGALAVLLFTAVALQPRLVVVRPPGTDIVALTVGTLEWAIFPPQRMDIGLTRVGVEEVVEMGHNRHG*
Ga0126369_131021491	3300012971	Tropical Forest Soil	VGEGALAAVQECAREVIEGALATLLLTAVALQAGLVVVGAPGPDVVALTAGTLEGPIFPAQRMDGGLTHFGVEE
Ga0157375_102504324	3300013308	Miscanthus Rhizosphere	VHDRALAAVQERSREIIEGALAGLLFTAVALQSGLVVVGTPRTNVVALTPRTLEGPIFPPQRMDVRLTRFGVEELVEMRKNEHG*
Ga0182000_105015391	3300014487	Soil	ALAAIQERAREVIEGALAVLLFTAVALQSGLVVVCAPGTDVVALTAGTLEWAIFPPQRMDIRLTCFSVEELVQMRHKRHG*
Ga0132258_112089973	3300015371	Arabidopsis Rhizosphere	VQECACEVIEGALAGVLFTAVALQSGLVVVRAPRTDVVALTPRTLEGPIFPAQCMNVGLTHFGVEEVVQMRHYRHG*
Ga0132256_1004101171	3300015372	Arabidopsis Rhizosphere	GALAGLLFTAVAFQARLGMVGAPGTNVEALTAGTLERAIFPPQRMDIGLTHFGVEEVVEMRHHRHS*
Ga0132257_1009872322	3300015373	Arabidopsis Rhizosphere	VRQRALAAVQERAREIIEGALAVLLFTAVAFQSGLVVIEAPGTDVGALTSGALQGPIFPAQRMDIRVTRFGVEELVQMRHDRHG*
Ga0132255_1040000261	3300015374	Arabidopsis Rhizosphere	RACEIIEGALAGLLFTAVALQAGLVVIDAPGTDVVALTSGALQGPIFPAQRMDIRVTRFGVEELVQMRHDRHG*
Ga0132255_1053736651	3300015374	Arabidopsis Rhizosphere	KGGENPVCEGALAAIQERSGEVIEGALAALLFTAVALQARLVVVGAPEPDVGALTPRTLERPLFPAQRMDVGLTHFGVEEVVEMRHNRHG*
Ga0182032_119414701	3300016357	Soil	ERAREVIEGALAVLLFTAIALQARLVVVGAPGTDVEALTPRTLEGPIFPPECMDVGLTLVDVEELIKVREYWHG
Ga0182038_112934121	3300016445	Soil	MPQRALAAIQQRASQVIEGALAGLLFTAVAFQARLGVVRTPRTDVVALTARTLEWASFPPQRMDRGLTRFGVEEVVEM
Ga0209382_105502682	3300027909	Populus Rhizosphere	PTQERTREVIEGALAALLFTAVAFQAWLGVVGAPGTDVVALTAGTLEGPIFPPECMDVRLALCETEEVMDI
Ga0268264_110804201	3300028381	Switchgrass Rhizosphere	EGALAGLLFTAVAFQPWLVVVRPPRTDVVALTAGTLEGALFPPQRMDIGLTRCGVEEVVEMRHHRHR
Ga0247828_103767771	3300028587	Soil	EGTLSALLFTAIALQARLGVVGAPRPDVEALTAGTLEGPIFPAQRMDVGLTRFRVEEVVEMRHHRHG
Ga0308194_101607381	3300031421	Soil	LLSKAASFRGQWLTQERAREVIEGALAGLRFTAVALQAGLVMVGTPRTNVVALTPRTLERPIFPSQRMNVGVTLFGVEELVDG
Ga0307469_119277521	3300031720	Hardwood Forest Soil	VHHRALAAIQERTREVIEGALAALLFTAVAFQAWLGMVRAPWSDVEALTAGTLEGPIFPAQRMDVGLTRFGVEEVVEMRHNRHG
Ga0318501_102821962	3300031736	Soil	VHHRALAAIQACAREVIEGALAALLFAAVAFQARLGVVGAPGTDVEALAPGTLQRTIFLPQCMDVGLALVGVEELVDV
Ga0318504_104480871	3300032063	Soil	AREVIEGALAVLLFTAVAFQSRLVVIRTPGTNVVALTSGALQGPIFPAQRMDIRVTRFGVEELVKMRHDRHG
Ga0307470_108424151	3300032174	Hardwood Forest Soil	IEGALATLLFTAVALQAGLVVVGAPWTDVVALTPRTLEGSIFPAQPMDVRLTRFGVEEVVQM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065929

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences