Metagenome Family F065930

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065930
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	63 residues
Representative Sequence	MRMPILSYFLVAGIVLFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPNETQSPTSGVDSSD
Number of Associated Samples	82
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.95 %
% of genes near scaffold ends (potentially truncated)	24.41 %
% of genes from short scaffolds (< 2000 bps)	77.95 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.543 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (32.283 % of family members)
Environment Ontology (ENVO)	Unclassified (25.197 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.906 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.67% β-sheet: 0.00% Coil/Unstructured: 73.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF05235	CHAD	3.15
PF03992	ABM	2.36
PF00293	NUDIX	1.57
PF04115	Ureidogly_lyase	1.57
PF03330	DPBB_1	1.57
PF13618	Gluconate_2-dh3	1.57
PF00072	Response_reg	0.79
PF12680	SnoaL_2	0.79
PF06147	DUF968	0.79
PF00174	Oxidored_molyb	0.79
PF07992	Pyr_redox_2	0.79
PF11149	DUF2924	0.79
PF02586	SRAP	0.79
PF09335	SNARE_assoc	0.79
PF00005	ABC_tran	0.79
PF04800	NDUS4	0.79
PF09361	Phasin_2	0.79
PF02622	DUF179	0.79
PF04828	GFA	0.79
PF02735	Ku	0.79
PF12697	Abhydrolase_6	0.79
PF14224	DUF4331	0.79
PF07366	SnoaL	0.79
PF03466	LysR_substrate	0.79
PF00817	IMS	0.79
PF00561	Abhydrolase_1	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	3.15
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	3.15
COG3194	Ureidoglycolate hydrolase (allantoin degradation)	Nucleotide transport and metabolism [F]	1.57
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.79
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.79
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.79
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.79
COG1678	Putative transcriptional regulator, AlgH/UPF0301 family	Transcription [K]	0.79
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.79
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.79
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.79
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.54 %
All Organisms	root	All Organisms	46.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.54 %
cellular organisms	root	All Organisms → cellular organisms	46.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.01 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.92 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.54 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.57 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.54 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.09 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	5.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.57 %
Chelatococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae	0.79 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.54 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.30 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	5.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.57 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.79 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.54 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	5.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.57 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.79 %
Chelatococcus reniformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus reniformis	0.79 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.79 %
Bradyrhizobium oligotrophicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium oligotrophicum	0.79 %
Bradyrhizobium hipponense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium hipponense	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.54 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	5.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.57 %
Mesorhizobium sp. LSJC277A00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC277A00	0.79 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.79 %
Chelatococcus reniformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus reniformis	0.79 %
Bradyrhizobium oligotrophicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium oligotrophicum	0.79 %
Bradyrhizobium hipponense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium hipponense	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8762639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4308	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0707971	Not Available	568	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101514764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2503	Open in IMG/M
3300000559\|F14TC_100940427	Not Available	1243	Open in IMG/M
3300000787\|JGI11643J11755_11541037	All Organisms → cellular organisms → Bacteria → Proteobacteria	1678	Open in IMG/M
3300001431\|F14TB_110185532	Not Available	664	Open in IMG/M
3300003659\|JGI25404J52841_10061511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	786	Open in IMG/M
3300003659\|JGI25404J52841_10086527	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300004114\|Ga0062593_100358943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1279	Open in IMG/M
3300004156\|Ga0062589_100006322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4453	Open in IMG/M
3300004463\|Ga0063356_105604459	Not Available	539	Open in IMG/M
3300004479\|Ga0062595_100213903	Not Available	1208	Open in IMG/M
3300005294\|Ga0065705_10542544	Not Available	745	Open in IMG/M
3300005332\|Ga0066388_100015770	All Organisms → cellular organisms → Bacteria	6278	Open in IMG/M
3300005332\|Ga0066388_100744434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1581	Open in IMG/M
3300005332\|Ga0066388_102844473	Not Available	884	Open in IMG/M
3300005347\|Ga0070668_101302711	Not Available	660	Open in IMG/M
3300005353\|Ga0070669_101823248	Not Available	531	Open in IMG/M
3300005434\|Ga0070709_11218272	Not Available	605	Open in IMG/M
3300005445\|Ga0070708_100157228	All Organisms → cellular organisms → Bacteria → Proteobacteria	2117	Open in IMG/M
3300005455\|Ga0070663_101446160	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300005713\|Ga0066905_100075112	Not Available	2194	Open in IMG/M
3300005713\|Ga0066905_100092617	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300005713\|Ga0066905_100113550	Not Available	1872	Open in IMG/M
3300005713\|Ga0066905_100129101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1780	Open in IMG/M
3300005713\|Ga0066905_100359617	Not Available	1166	Open in IMG/M
3300005713\|Ga0066905_100860578	All Organisms → cellular organisms → Bacteria → Proteobacteria	790	Open in IMG/M
3300005713\|Ga0066905_101532715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium oligotrophicum	608	Open in IMG/M
3300005764\|Ga0066903_102890541	Not Available	931	Open in IMG/M
3300005937\|Ga0081455_10009145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10217	Open in IMG/M
3300005937\|Ga0081455_10014105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7854	Open in IMG/M
3300005937\|Ga0081455_10316323	Not Available	1114	Open in IMG/M
3300005983\|Ga0081540_1014998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4924	Open in IMG/M
3300005983\|Ga0081540_1221923	Not Available	672	Open in IMG/M
3300006049\|Ga0075417_10001491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6505	Open in IMG/M
3300006049\|Ga0075417_10029303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2269	Open in IMG/M
3300006049\|Ga0075417_10054931	Not Available	1730	Open in IMG/M
3300006049\|Ga0075417_10148754	Not Available	1088	Open in IMG/M
3300006049\|Ga0075417_10322281	Not Available	753	Open in IMG/M
3300006194\|Ga0075427_10068797	Not Available	629	Open in IMG/M
3300006844\|Ga0075428_100054049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	4400	Open in IMG/M
3300006844\|Ga0075428_100269439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1832	Open in IMG/M
3300006844\|Ga0075428_100351743	Not Available	1581	Open in IMG/M
3300006844\|Ga0075428_101506978	Not Available	704	Open in IMG/M
3300006845\|Ga0075421_100061505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4746	Open in IMG/M
3300006845\|Ga0075421_101101042	Not Available	892	Open in IMG/M
3300006847\|Ga0075431_100182351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC277A00	2154	Open in IMG/M
3300006847\|Ga0075431_101672330	Not Available	594	Open in IMG/M
3300006852\|Ga0075433_10049061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	3672	Open in IMG/M
3300006853\|Ga0075420_100185828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1817	Open in IMG/M
3300006854\|Ga0075425_100288425	All Organisms → cellular organisms → Bacteria → Proteobacteria	1889	Open in IMG/M
3300006854\|Ga0075425_100377553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1632	Open in IMG/M
3300006904\|Ga0075424_100269605	All Organisms → cellular organisms → Bacteria → Proteobacteria	1810	Open in IMG/M
3300006904\|Ga0075424_101269220	Not Available	783	Open in IMG/M
3300006904\|Ga0075424_101953216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	619	Open in IMG/M
3300006904\|Ga0075424_102017032	Not Available	609	Open in IMG/M
3300006969\|Ga0075419_11217550	Not Available	556	Open in IMG/M
3300009094\|Ga0111539_10204087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2304	Open in IMG/M
3300009094\|Ga0111539_11287296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus reniformis	848	Open in IMG/M
3300009147\|Ga0114129_10280548	Not Available	2226	Open in IMG/M
3300009147\|Ga0114129_12296867	Not Available	647	Open in IMG/M
3300009147\|Ga0114129_13472661	Not Available	505	Open in IMG/M
3300009156\|Ga0111538_10116538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3393	Open in IMG/M
3300009156\|Ga0111538_10870049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1141	Open in IMG/M
3300009162\|Ga0075423_10035127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5100	Open in IMG/M
3300009168\|Ga0105104_10826563	Not Available	539	Open in IMG/M
3300010043\|Ga0126380_10213891	Not Available	1302	Open in IMG/M
3300010046\|Ga0126384_10556078	Not Available	998	Open in IMG/M
3300010046\|Ga0126384_12061042	Not Available	547	Open in IMG/M
3300010047\|Ga0126382_10017938	All Organisms → cellular organisms → Bacteria	3608	Open in IMG/M
3300010047\|Ga0126382_10084377	Not Available	1998	Open in IMG/M
3300010047\|Ga0126382_12166634	Not Available	534	Open in IMG/M
3300010358\|Ga0126370_11549687	Not Available	632	Open in IMG/M
3300010359\|Ga0126376_10902545	Not Available	874	Open in IMG/M
3300010359\|Ga0126376_11973937	Not Available	625	Open in IMG/M
3300010359\|Ga0126376_12231944	Not Available	593	Open in IMG/M
3300010359\|Ga0126376_12343338	Not Available	580	Open in IMG/M
3300010362\|Ga0126377_12856795	Not Available	557	Open in IMG/M
3300010371\|Ga0134125_10215880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2133	Open in IMG/M
3300010375\|Ga0105239_10842210	Not Available	1052	Open in IMG/M
3300010375\|Ga0105239_11987171	Not Available	675	Open in IMG/M
3300010376\|Ga0126381_104688634	Not Available	526	Open in IMG/M
3300010398\|Ga0126383_10048870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3510	Open in IMG/M
3300011119\|Ga0105246_10016096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4733	Open in IMG/M
3300012507\|Ga0157342_1027602	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012943\|Ga0164241_10723168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	723	Open in IMG/M
3300012948\|Ga0126375_10482311	Not Available	919	Open in IMG/M
3300012948\|Ga0126375_11032415	Not Available	672	Open in IMG/M
3300012957\|Ga0164303_10052058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1820	Open in IMG/M
3300012971\|Ga0126369_10682110	Not Available	1104	Open in IMG/M
3300012985\|Ga0164308_10174181	All Organisms → cellular organisms → Bacteria → Proteobacteria	1615	Open in IMG/M
3300012986\|Ga0164304_11208882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300012989\|Ga0164305_11270085	Not Available	642	Open in IMG/M
3300013296\|Ga0157374_11325487	Not Available	742	Open in IMG/M
3300013297\|Ga0157378_10775483	Not Available	983	Open in IMG/M
3300013306\|Ga0163162_10862961	All Organisms → cellular organisms → Bacteria → Proteobacteria	1020	Open in IMG/M
3300013308\|Ga0157375_13106562	Not Available	554	Open in IMG/M
3300014325\|Ga0163163_11377529	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300014969\|Ga0157376_10367710	All Organisms → cellular organisms → Bacteria → Proteobacteria	1381	Open in IMG/M
3300015373\|Ga0132257_103486920	Not Available	572	Open in IMG/M
3300015374\|Ga0132255_104304728	Not Available	604	Open in IMG/M
3300016319\|Ga0182033_11577464	Not Available	593	Open in IMG/M
3300016371\|Ga0182034_10699021	Not Available	862	Open in IMG/M
3300016445\|Ga0182038_10966153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	753	Open in IMG/M
3300018072\|Ga0184635_10015416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium hipponense	2740	Open in IMG/M
3300018072\|Ga0184635_10124633	Not Available	1024	Open in IMG/M
3300018081\|Ga0184625_10387016	Not Available	723	Open in IMG/M
3300018081\|Ga0184625_10564450	Not Available	564	Open in IMG/M
3300025917\|Ga0207660_10827573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	755	Open in IMG/M
3300025926\|Ga0207659_11341081	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300025928\|Ga0207700_10462324	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300025961\|Ga0207712_10661841	Not Available	908	Open in IMG/M
3300027873\|Ga0209814_10014653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	3129	Open in IMG/M
3300027873\|Ga0209814_10023428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2515	Open in IMG/M
3300027873\|Ga0209814_10102458	Not Available	1215	Open in IMG/M
3300027873\|Ga0209814_10104833	Not Available	1201	Open in IMG/M
3300027873\|Ga0209814_10349006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	647	Open in IMG/M
3300027874\|Ga0209465_10663169	Not Available	513	Open in IMG/M
3300027880\|Ga0209481_10055536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1844	Open in IMG/M
3300027907\|Ga0207428_10055701	Not Available	3143	Open in IMG/M
3300027909\|Ga0209382_10413041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1501	Open in IMG/M
3300027909\|Ga0209382_10595036	Not Available	1205	Open in IMG/M
3300027909\|Ga0209382_11544517	Not Available	659	Open in IMG/M
3300031170\|Ga0307498_10027443	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300031446\|Ga0170820_17682868	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300031744\|Ga0306918_10439091	Not Available	1019	Open in IMG/M
3300031912\|Ga0306921_12693601	Not Available	511	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	51.97%
Environmental	Environmental	48.03%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	51.97%
Terrestrial	Environmental → Terrestrial	44.09%
Aquatic	Environmental → Aquatic	3.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	41.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.45%
Sediment	Environmental → Aquatic → Sediment	3.15%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	38.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.92%
Loam	Environmental → Terrestrial → Soil → Loam	14.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.15%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.57%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	38.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.36%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	32.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.45%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	5.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.36%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_03125200	2088090015	Soil	MRMPILTYFLVVGTVLFGGLVLVSSQLESKPLPVSQRVGVPPPFKALPDDLPTSTWLERNQPF
ICChiseqgaiiDRAFT_07079711	3300000033	Soil	MRMPILAYFLVVGTVLFGGLVLLSTQLESKPLPVSQRIGVPPPFKASADEPQILRQD*
INPhiseqgaiiFebDRAFT_1015147641	3300000364	Soil	MQMPILSYFLLVGLVLFGGLVLVSSQLESKPLPVSQRIGLPTPFKALPEDNQSLTSNGGEIIP*
F14TC_1009404273	3300000559	Soil	MRMPILTYFLVVGTVLFGGLVLVSSQLESKPLPVSQRVGVPPPFKALPDDLPTSTWLERNQPF*
JGI11643J11755_115410372	3300000787	Soil	MQMPILSYFLLVGLVLFGGLVLVSSQLESKPLPVSQRIGLPTPFKELPEDNQSLTSNGGEIIP*
F14TB_1101855321	3300001431	Soil	MMRMPILSHFLVVGLVLFGGLVLVSSQLESKPLPVSQRIGLPTPFKALPEDNQSLTSNGGEIIP*
JGI25404J52841_100615111	3300003659	Tabebuia Heterophylla Rhizosphere	MRMPILSYFLLIGAVLFGGLLLVSSQLESKPLPVSQRIGLPPPFKALPDDTQSQTGGLDSVDEFSFPD*
JGI25404J52841_100865271	3300003659	Tabebuia Heterophylla Rhizosphere	IGTVLFGGLFLVSSQLESKPLPVSQRIGLPPPFKALPNETQLQTGGVDSADKSYVRD*
Ga0062593_1003589432	3300004114	Soil	MRIPILAYFLVVGTILFGGLVLVSSKLESQPLPVSQRIGVPAPFKALPDANGSPTSGNSAVD*
Ga0062589_1000063224	3300004156	Soil	VIRETQPVSQPEKLMRIPILAYFLVVGTILFGGLVLVSSQLESRPIPVSQRIGVPAPFKALPDANGSSTSDNSAAD*
Ga0063356_1056044592	3300004463	Arabidopsis Thaliana Rhizosphere	MRIPILAYFLVVGTILFGGLVLVSSQLESRPIPVSQRIGVPAPFKALPDANGSSTSDNSAAD*
Ga0062595_1002139031	3300004479	Soil	MRMPILSYFLAAGIILFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPNEIQSPTSGVDSTDESNAGD*
Ga0065705_105425441	3300005294	Switchgrass Rhizosphere	LSEKSMRMPILSYFLVAGIVLFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPDETQSPTSGVVSTAESDVRD*
Ga0066388_1000157708	3300005332	Tropical Forest Soil	MRMPILSYFLVAGMILFGGLVLVSSRLESKPLSVSQTIGLPAPFKAPSEDAPTRDIDRIFP*
Ga0066388_1007444341	3300005332	Tropical Forest Soil	MRMPILSYFLLTGAVLFGGLILVSSQLESKPLPVSQRIGLPAPFKASPDETQLQTGGVDSADESSVRD*
Ga0066388_1028444732	3300005332	Tropical Forest Soil	MRMPILSYFLVIGAVLFGGLFLVSSQLESKPLLVSQKIGLPPPFKALSDETQSPTSGVDSTAESNVGD*
Ga0070668_1013027111	3300005347	Switchgrass Rhizosphere	MRMPILSYFLAAGIILFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPNEIQSPTSGVDS
Ga0070669_1018232481	3300005353	Switchgrass Rhizosphere	MRMPIVSYFLVVGILLFGGLILVSSRLESKQLPVSQTSGLPAPFKAPPEDTQSPTSDGGEITP*
Ga0070709_112182721	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPILSYFLAAGIILFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPNEIQSPTSGVDSTDESNAGD*
Ga0070708_1001572284	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRMPILSYFLVVGILLFGGLVLVSSRLESKPLPVSQTIGLPAPFKAPPEDTQSPTNDGGDIIP*
Ga0070663_1014461602	3300005455	Corn Rhizosphere	LFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPNEIQSPTSGVDSTDESNAGD*
Ga0066905_1000751122	3300005713	Tropical Forest Soil	MRMPILAYFLVVGAVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKASADEPQIFRQD*
Ga0066905_1000926173	3300005713	Tropical Forest Soil	MRMPILSYFLVIGTVLFGGLFLVSSQLESKPLLVSQKIGLPPPFKALSDETQSPTSGVDSTAESNVGD*
Ga0066905_1001135504	3300005713	Tropical Forest Soil	MRMPILAYFLVVGTVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKASADEPQLFRQD*
Ga0066905_1001291011	3300005713	Tropical Forest Soil	MRMPIFAYFLVVGTVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKASGDEPQFSWQD*
Ga0066905_1003596172	3300005713	Tropical Forest Soil	MRMPLLAYFLVVGTVLFGGLVLLSTQLESKPLPVSQRIGVPPPFKALADEPQIPRQD*
Ga0066905_1008605782	3300005713	Tropical Forest Soil	MRMPILSYFLLIGAVLFGGLFLVSSQLESKPLPVSQRIGLPPPFKALPDEKQSLMSGVNSATESNVQD*
Ga0066905_1015327151	3300005713	Tropical Forest Soil	MPILSYFLVVGAVLFGGLVLVSSQLESKPLPVSQRVGVPPPFKAPPADLPTPTWLERNQPF*
Ga0066903_1028905413	3300005764	Tropical Forest Soil	MRMPILSYFLVGGTILFGGLVLVSSQLESKPLPVSQTVGVPPPFKAAPEDRQSTTSTDNL
Ga0081455_1000914518	3300005937	Tabebuia Heterophylla Rhizosphere	MRMPILSYFLVIGTVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLERNQPF*
Ga0081455_100141058	3300005937	Tabebuia Heterophylla Rhizosphere	MRMPILAHFLVVGTVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKASADEPQLFRQD*
Ga0081455_103163232	3300005937	Tabebuia Heterophylla Rhizosphere	VRMPILAYFLVVGTVLFGGLVLVSTQLESKPLPLSQRIGVPPPFKASADAPQIFRLD*
Ga0081540_10149985	3300005983	Tabebuia Heterophylla Rhizosphere	MRVPILSYFLVIGTVLFGGLFLVSSQLESKPLPVSQRIGLPPPFKALPNETQLQTGGVDSADKSYVRD*
Ga0081540_12219232	3300005983	Tabebuia Heterophylla Rhizosphere	MPIFSYFLVIGTVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKAPDDLPTPTWLERNQPF
Ga0075417_100014918	3300006049	Populus Rhizosphere	MRMPILSYFLVIGTVLFGGLVLISTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLERNQTF*
Ga0075417_100293033	3300006049	Populus Rhizosphere	LSYFLVVGIVLFGGLVLVSSQLESKPLPVSQRIGLPTPFKALPEDNQSLTSNDGEIIP*
Ga0075417_100549312	3300006049	Populus Rhizosphere	MRMPILSYFLVAGIVLFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPDQTQSPTSGADSTADSNVQD*
Ga0075417_101487542	3300006049	Populus Rhizosphere	MPILSYFLVVGTVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLERNQPF*
Ga0075417_103222812	3300006049	Populus Rhizosphere	MNVPEPSKAAAKESGGMSLLEKSMRMPILSYFLVVGIALFGGLVLVSSELESKPLPVSQRIGLPAPFKAPPENTQSPTNDSDDIIP*
Ga0075427_100687971	3300006194	Populus Rhizosphere	MRMPILTYFGVVGTVLFGGLVLVSSQLESKPLPVSQRVGVPPPFKALPDDLPTSTWLERNQPF*
Ga0075428_1000540497	3300006844	Populus Rhizosphere	MRMPILSYFLVVGTVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLERNQPF*
Ga0075428_1002694393	3300006844	Populus Rhizosphere	MPILSYFLVVGTVLFGALVLVSTQLESKPLSVSQRIGVPPPFKAAPDDLPTPTWLERNQPF*
Ga0075428_1003517432	3300006844	Populus Rhizosphere	MRMPILSYFLVVGTVLFGGLVLVSTQLESKPLSVSQRIGVPPPFKAAPDDLPTPTWLERNQPF*
Ga0075428_1015069782	3300006844	Populus Rhizosphere	MRMPVLAYFLVVGTVLFGGLVLLSTQLESKPLPVSQRIGAPPPFKGPADEPQIPRQD*
Ga0075421_1000615057	3300006845	Populus Rhizosphere	MRMPILSYFLVVGTVLFGALVLVSTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLE
Ga0075421_1011010421	3300006845	Populus Rhizosphere	MRMPILSYFLVVGTVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLE
Ga0075431_1001823512	3300006847	Populus Rhizosphere	MPILSYFLVAGIVLFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPNETQSPTSGVDSSDEPNVRD*
Ga0075431_1016723301	3300006847	Populus Rhizosphere	MPILSYFLVVGTVLFGGLVLVSTQLESKPLSVSQRIGVPPPFKAAPDDLPTPTWLERNQPF*
Ga0075433_100490619	3300006852	Populus Rhizosphere	MRMPLLSHFLVVGAVLFGGLILVSGQLASKPLPVSQRIGVPPPFKAPPDQTQSPTSGADSTADSNVQD*
Ga0075420_1001858284	3300006853	Populus Rhizosphere	MPILSYFLVIGTVLFGGLVLISTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLERNQTF*
Ga0075425_1002884253	3300006854	Populus Rhizosphere	MSLLEKSMRMPILSYFLVVGIALFGGLVLVSSELESKPLPVSQRIGLPAPFKAPPENTQSPTNDSDDIIP*
Ga0075425_1003775532	3300006854	Populus Rhizosphere	MRMPIVSYFLVVGILLFGGLILVSSRLESKQLPVSQTIGLPAPFKAPPEDTQSPKSDGEITP*
Ga0075424_1002696053	3300006904	Populus Rhizosphere	MRMPILSYFLAAGIILFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPDQTQSPTSGADSTADSNVQD*
Ga0075424_1012692201	3300006904	Populus Rhizosphere	LSYFFVVGLLLFGGLVLVSSQLESKPLPVSQRIGLPTPFKALPEDNQSLTSN
Ga0075424_1019532162	3300006904	Populus Rhizosphere	MRMPILSYFLVVGIALFGGLVLVSSELESKPLPVSQRIGLPAPFKAPPENTQSPTNDSDDIIP*
Ga0075424_1020170321	3300006904	Populus Rhizosphere	MRMPVLSYFLVVGILLFGGLVLVSSRLESKPLPVSQTIGLPAPFKALPEDTQSATNDGVDIIP*
Ga0075419_112175502	3300006969	Populus Rhizosphere	MNVPEPSKAAAKESGGMSLLEKSMRMPILSYFLVVGIALFGGLVLVSSELESKPLPVSQRIGLPAPFKAPPENTQSPTSDSDDIIP*
Ga0111539_102040874	3300009094	Populus Rhizosphere	MPILSYFLVVGTILFGGLVLVSTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLERNQPF*
Ga0111539_112872962	3300009094	Populus Rhizosphere	LSYFLVVGIVLFGGLVLVSSQLESKPLPVSQRIGLPTPFKELPEDNQSLTSNGGEIIP*
Ga0114129_102805483	3300009147	Populus Rhizosphere	MRMPILSYFLVIGAVVFGGLVLVSSQLESKPLPVSQRVGVPPPFKAPPDDLPTSTWLERNQPF*
Ga0114129_122968671	3300009147	Populus Rhizosphere	MRMPIFAYFLVVGAVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKASADEPQIYRQD*
Ga0114129_134726611	3300009147	Populus Rhizosphere	MPILSYFLVVGTVLFGALVLVSTQLESKPLPVSQRIGVPPPFKAAPDDLPTPT
Ga0111538_101165388	3300009156	Populus Rhizosphere	MPILSSFLVIGTVLFGGLVLISTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLERNQTF*
Ga0111538_108700493	3300009156	Populus Rhizosphere	LSYFLVVGTVLFGGLVLVSTQLESKPLSVSQRIGVPPPFKAAPDDLPTPTWLERNQPF*
Ga0075423_100351276	3300009162	Populus Rhizosphere	MPILSYFLVVGLVLFGGLVLVSSQLESKPLPVSQRIGLPTPFKALPEDNQSLTSNDGEIIP*
Ga0105104_108265631	3300009168	Freshwater Sediment	MPILSYFLVIGTVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLERNQPF*
Ga0126380_102138912	3300010043	Tropical Forest Soil	MPILSYFLIIGAVLFGGLILVSSQLESKPLPVSQRIGVPPPFKALPDEIQSQTGSVDSADESNVRD*
Ga0126384_105560783	3300010046	Tropical Forest Soil	MRMPILSYFLVIGTVLFGGLILVSSQLESKPLPVSQRIGVPPPFKALADETQSQTGSVDSADESNVRD*
Ga0126384_120610421	3300010046	Tropical Forest Soil	MRMPILSYFLLVGIVLFGGLILVSTQLESEPLPVSQRIGAPPPFKAPPDEKQSLMSGVNSATESNVQD*
Ga0126382_100179381	3300010047	Tropical Forest Soil	MRMPIFAYFLVVGTVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKASADAPQIFRLD*
Ga0126382_100843773	3300010047	Tropical Forest Soil	MRMPILSYFLVIGTVLFGGLILVSSQLESKPLPVSQRIGVPPPFKALPDEIQSQTGSVDSADESNVRD*
Ga0126382_121666342	3300010047	Tropical Forest Soil	FGVLVLVSSQLESKPLPVSQWIGLPPPFKALPDEKQSLMSGVNSATESNVQD*
Ga0126370_115496871	3300010358	Tropical Forest Soil	MPAESLLEKWSMRMPILSYFLLTGAVLFGGLILVSNQLESKPLPVSQRVGLPAPFKASPDETQLQTGGVDSADESNVRY*
Ga0126376_109025453	3300010359	Tropical Forest Soil	LSYFLLIGAVLFGGLILVSSQLESKPLPVSQRIGLPQPFKALPDETQSQTGGVDFADESNVRD*
Ga0126376_119739371	3300010359	Tropical Forest Soil	MRMPILSYFLVIGTVLFGGLILVSSQLESKPLPVSQRIGLPPPFKALPDEKQSLMSG
Ga0126376_122319441	3300010359	Tropical Forest Soil	MRMPILSYFLLVGIVLFGGLILVSTQLESEPLPVSQRIGAPPLFKAPPDEKQSLMSGVNSATESNVQD*
Ga0126376_123433381	3300010359	Tropical Forest Soil	MRRPILAYFLVVGTVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKASADEPQIFRQD*
Ga0126377_128567952	3300010362	Tropical Forest Soil	MPILSYFLVIGTILFGGLFLVSSQLESKPLPVSQRVGLPPPFKALSDETQSPTSGVDSPAESNVGD*
Ga0134125_102158802	3300010371	Terrestrial Soil	VIRETQPVSQPEKLMRIPILAYFLVVGTILFGGLGLVSSQLESRPIPVSQRIGVPAPFKALPDANGSSTSDNSAAD*
Ga0105239_108422101	3300010375	Corn Rhizosphere	MPIVSYFLVVGILLFGGLILVSSRLESKQLPVSQTIGLPAPFKAPPEDTQSPTSDGGEITP*
Ga0105239_119871711	3300010375	Corn Rhizosphere	MPVLSYFLVVGILLFGGLVLVSSRLESKPLPVSQTIGLPAPFKALPEDTQSATNDGVDIIP*
Ga0126381_1046886342	3300010376	Tropical Forest Soil	MPILSYFLVAGAILFGGLVLISSQLEVKPLPVSQTIGMPQPFKAPSTTSSQNF*
Ga0126383_100488705	3300010398	Tropical Forest Soil	MPAESLLEKWSMRMPILSYFLLTGAVLFSGLILVSSQLESKPLPVSQRIGLPAPFKASPDETQLQTGGVDSADESNVRD*
Ga0105246_100160966	3300011119	Miscanthus Rhizosphere	MPVLSYFLVVGILLFGGLVLVSSRLESKPLPVSQTIGLLAPFKAPLEDTQSAT
Ga0157342_10276021	3300012507	Arabidopsis Rhizosphere	MPVLSYFLVVGILLFGGLVLVSSRLESKPLPVSQTIGLPAPFKALPEDTQSATNDGGDKIP*
Ga0164241_107231682	3300012943	Soil	MRIPILAYFLVVGTILFGGLVLVSSKLESQPLPVSQRIGVPAPFKALPDANGSPTSGNAAAD*
Ga0126375_104823113	3300012948	Tropical Forest Soil	MPILSYFLVIGAVLFGGLFLVSSQLESKPLLVSQKIGLPPPFKALSDETQSPTSGVDSTAESNVGD*
Ga0126375_110324151	3300012948	Tropical Forest Soil	RMPIFAYFLVVGTVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKASGDEPQFSWQD*
Ga0164303_100520582	3300012957	Soil	MPIVSYFLVVGILLFGGLILVSSRLESKQLPVSQTIGLPAPFKAPPEDTQSPISDGGEITP*
Ga0126369_106821101	3300012971	Tropical Forest Soil	MPAESLLEKWSMRMPILSYFLLTGAVLFSGLMLVSSQLESKPLPVSQRIGLPAPFKASPDETQLQTGGVDSADESNVRD*
Ga0164308_101741814	3300012985	Soil	MPVLSYFLVVGILLFGGLVLVSSRLESKQLPVSQTIGLPAPFKAPPEDTQSP
Ga0164304_112088821	3300012986	Soil	MPIVSYFLVVGILLFGGLILVSSRLESKQLPVSQTIGLPAPFKAPPEDTQSPKSDGEITP
Ga0164305_112700851	3300012989	Soil	MPVLSYFLVVGILLFGGLVLVSSRLESKPLPVSQTIGLPAPFKALPQDTQSATNDGGDKIP*
Ga0157374_113254872	3300013296	Miscanthus Rhizosphere	MPVLSYFLVVGILLFGGLVLVSSRLESKPLPVSQTIGLPAPFKAPLEDTQSATNDGGDIIP*
Ga0157378_107754833	3300013297	Miscanthus Rhizosphere	MPIVSYFLVVGILLFGGLILVSSRLESKQLPVSQTIGLPAPFKAPPEDTQ
Ga0163162_108629612	3300013306	Switchgrass Rhizosphere	MRMPVLSYFLVVGILLFGGLVLVSSRLESKPLPVSQTIGLPAPFKAPPEDTQSATNDGVDIIP*
Ga0157375_131065621	3300013308	Miscanthus Rhizosphere	MPIVSYFLVVGILLFGGLILVNSRLESKQLPVSQTIGLPAPFKAPPEDTQSPTSDGGEITP*
Ga0163163_113775291	3300014325	Switchgrass Rhizosphere	KSFAEKSMRMPILSYFLAAGIILFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPNEIQSPTSGVDSTDESNAGD*
Ga0157376_103677102	3300014969	Miscanthus Rhizosphere	MPVLSYFLVVGILLFGGLVLVSSRLESKPLPVSQTIGLPAPFKALPEDTQSATNDGGDKTP*
Ga0132257_1034869201	3300015373	Arabidopsis Rhizosphere	MPVLSYFLVVGILLFGGLVLVSSRLESKPLPVSQTIGLPAPFKALPEDTQSATNDGGDIIP*
Ga0132255_1043047282	3300015374	Arabidopsis Rhizosphere	MPVLSYFLVVGILLFGGLALVSSRLESKPLPVSQTIGLPAPFKALPEDTQSATNDGGDIIP*
Ga0182033_115774641	3300016319	Soil	AFMSPLEKSMRMPILSYFLVVGMLLFGGLILVSSELESKPLAVSQTIGLPPAFKAPPEDIQSLTKDGAGIHP
Ga0182034_106990212	3300016371	Soil	RHYFNTAFMSPLEKSMRMPILSYFLVVGMLLFGGLILVSSELESKPLAVSQTIGLPPAFKAPPEDIQSLTKDGAGIHP
Ga0182038_109661531	3300016445	Soil	MRAESFLEKWSMRMPILSYFLLAGAVLFGGLILVSSQLESKPLPVSQRIGLPAPFKASPDETQLQTGGVDSADESNVRD
Ga0184635_100154167	3300018072	Groundwater Sediment	MQMPILTYFLVVGTALFGALVLVTSQLESKLLPVTQTIGVPPPFKALPELPTTNRTHTVP
Ga0184635_101246331	3300018072	Groundwater Sediment	MRMPIVSYFLVVGITLFGGLVLVSNRLESKPLPVSQTIGLPAPFKAPPEDTKSPISDGGEITP
Ga0184625_103870161	3300018081	Groundwater Sediment	MPILSYFLVAGIVLFCGLILVSNQLESKPLPVSQRIGVPPPFKSLPDETQSPTSGVDSNAESNVRD
Ga0184625_105644501	3300018081	Groundwater Sediment	MQMPILTYFLVVGTALFGALVLVTSQLESKLLPVTQTMGVPPPFKALPELPTTNRPHTVP
Ga0207660_108275731	3300025917	Corn Rhizosphere	MRIPILAYFLVVGTILFGGLVLVSSQLESRPIPVSQRIGVPAPFKALPDANGSSTSDNSAAD
Ga0207659_113410811	3300025926	Miscanthus Rhizosphere	LAAGIILFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPNEIQSPTSGVDSTDESNAGD
Ga0207700_104623241	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GIILFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPNEIQSPTSGVDSTDESNAGD
Ga0207712_106618411	3300025961	Switchgrass Rhizosphere	MPILSYFLAAGIILFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPNEIQSPTSGVDSTDESNAGD
Ga0209814_100146535	3300027873	Populus Rhizosphere	MRMPILSYFLVIGTVLFGGLVLISTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLERNQTF
Ga0209814_100234283	3300027873	Populus Rhizosphere	LSYFLVVGIVLFGGLVLVSSQLESKPLPVSQRIGLPTPFKALPEDNQSLTSNDGEIIP
Ga0209814_101024583	3300027873	Populus Rhizosphere	MRMPILSYFLVAGIVLFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPNETQSPTSGVDSSD
Ga0209814_101048331	3300027873	Populus Rhizosphere	LVVGAVLFGGLILVSGQLASKPLPVSQRIGVPPPFKAPPDQTQSPTSGADSTADSNVQD
Ga0209814_103490061	3300027873	Populus Rhizosphere	MPILSYFLVVGTVLFGGLVLVSTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLERNQP
Ga0209465_106631692	3300027874	Tropical Forest Soil	MRMPILSYFLVGGTILFGGLASVSSQLESKPLPVSQTVGVPPPFKAAPEDRQ
Ga0209481_100555363	3300027880	Populus Rhizosphere	MRMPILTYFGVVGTVLFGGLVLVSSQLESKPLPVSQRVGVPPPFKALPDDLPTSTWLERNQPF
Ga0207428_100557014	3300027907	Populus Rhizosphere	MRMPVLSYFLVVGTILFGGLVLVSTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLERNQPF
Ga0209382_104130412	3300027909	Populus Rhizosphere	MNVPEPSKAAAKESGGMSLLEKSMRMPILSYFLVVGIALFGGLVLVSSELESKPLPVSQRIGLPAPFKAPPENTQSPTNDSDDIIP
Ga0209382_105950363	3300027909	Populus Rhizosphere	MRMPILSYFLVVGTVLFGALVLVSTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLERN
Ga0209382_115445172	3300027909	Populus Rhizosphere	MPILSYFLVVGTILFGGLVLVSTQLESKPLPVSQRIGVPPPFKAAPDDLPTPTWLERNQP
Ga0307498_100274431	3300031170	Soil	MRMPILSYFLVAGIVLFCGLILVSNQLESKPLPVSQRIGVSPPFKAPPNETQSPTSGVDSTDESNVRD
Ga0170820_176828682	3300031446	Forest Soil	MRMPILSYFLAAGIILFGGLILVSSQLESKPLPVSQRIGVPPPFKAPPIEIQSPTSGVDSTDESNARD
Ga0306918_104390912	3300031744	Soil	MRMPILSYFLVVGMLLFGGLILVSSELESKPLAVSQTIGLPPAFKAPPEDIQSLTKDGAGIHP
Ga0306921_126936012	3300031912	Soil	GLILVSNQLESKPLPVSQTVGLPAPFKASPDETQLQTGGVDSADESNVRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065930

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences