Metagenome / Metatranscriptome Family F065983

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065983
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	58 residues
Representative Sequence	MKKRLTAQEKRYVERRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKTGRPKG
Number of Associated Samples	95
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.98 %
% of genes near scaffold ends (potentially truncated)	21.26 %
% of genes from short scaffolds (< 2000 bps)	66.93 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.890 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.047 % of family members)
Environment Ontology (ENVO)	Unclassified (37.008 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.803 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.13% β-sheet: 0.00% Coil/Unstructured: 52.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00082	Peptidase_S8	7.87
PF08238	Sel1	7.09
PF07238	PilZ	6.30
PF13418	Kelch_4	3.94
PF11860	Muramidase	3.15
PF02129	Peptidase_S15	2.36
PF00202	Aminotran_3	2.36
PF04389	Peptidase_M28	1.57
PF06181	Urate_ox_N	1.57
PF08530	PepX_C	1.57
PF03795	YCII	0.79
PF06983	3-dmu-9_3-mt	0.79
PF02801	Ketoacyl-synt_C	0.79
PF02954	HTH_8	0.79
PF13189	Cytidylate_kin2	0.79
PF00115	COX1	0.79
PF13528	Glyco_trans_1_3	0.79
PF08924	DUF1906	0.79
PF01479	S4	0.79
PF03745	DUF309	0.79
PF10282	Lactonase	0.79
PF01810	LysE	0.79
PF00884	Sulfatase	0.79
PF06662	C5-epim_C	0.79
PF13185	GAF_2	0.79
PF03786	UxuA	0.79
PF00106	adh_short	0.79
PF02627	CMD	0.79
PF14119	DUF4288	0.79
PF13561	adh_short_C2	0.79
PF01321	Creatinase_N	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG2936	Predicted acyl esterase	General function prediction only [R]	1.57
COG3748	Uncharacterized membrane protein	Function unknown [S]	1.57
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	0.79
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.79
COG1312	D-mannonate dehydratase	Carbohydrate transport and metabolism [G]	0.79
COG1547	Predicted metal-dependent hydrolase	Function unknown [S]	0.79
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.79
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.79
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.89 %
Unclassified	root	N/A	18.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.89 %
Unclassified	root	N/A	18.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.89 %
Unclassified	root	N/A	18.11 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	32.28 %
Unclassified	root	N/A	18.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.11 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.87 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.11 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.11 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.30 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.11 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.30 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001082\|JGI12664J13189_1001959	Not Available	2321	Open in IMG/M
3300001356\|JGI12269J14319_10069098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1957	Open in IMG/M
3300001593\|JGI12635J15846_10007502	All Organisms → cellular organisms → Bacteria	9295	Open in IMG/M
3300002245\|JGIcombinedJ26739_101426586	Not Available	586	Open in IMG/M
3300003505\|JGIcombinedJ51221_10022383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2231	Open in IMG/M
3300003505\|JGIcombinedJ51221_10147499	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	949	Open in IMG/M
3300003505\|JGIcombinedJ51221_10306383	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300004080\|Ga0062385_10004953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4099	Open in IMG/M
3300004080\|Ga0062385_10324206	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300004092\|Ga0062389_100927371	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300004092\|Ga0062389_101322701	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300004152\|Ga0062386_100139301	All Organisms → cellular organisms → Bacteria	1887	Open in IMG/M
3300004631\|Ga0058899_11986318	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300004631\|Ga0058899_12110349	All Organisms → cellular organisms → Bacteria → Acidobacteria	1602	Open in IMG/M
3300005533\|Ga0070734_10092478	All Organisms → cellular organisms → Bacteria → Acidobacteria	1780	Open in IMG/M
3300005534\|Ga0070735_10253868	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300005538\|Ga0070731_10138964	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300005541\|Ga0070733_10001799	All Organisms → cellular organisms → Bacteria	15738	Open in IMG/M
3300005542\|Ga0070732_10015159	All Organisms → cellular organisms → Bacteria	4291	Open in IMG/M
3300005542\|Ga0070732_10920867	Not Available	534	Open in IMG/M
3300005591\|Ga0070761_10004781	All Organisms → cellular organisms → Bacteria	7996	Open in IMG/M
3300005591\|Ga0070761_10127023	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300005602\|Ga0070762_10000124	All Organisms → cellular organisms → Bacteria	26851	Open in IMG/M
3300005602\|Ga0070762_10018462	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3609	Open in IMG/M
3300005602\|Ga0070762_10345859	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300005610\|Ga0070763_10327472	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300005712\|Ga0070764_10027973	All Organisms → cellular organisms → Bacteria	2832	Open in IMG/M
3300005712\|Ga0070764_10170688	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1205	Open in IMG/M
3300005921\|Ga0070766_10137814	Not Available	1482	Open in IMG/M
3300005921\|Ga0070766_11134155	Not Available	540	Open in IMG/M
3300006176\|Ga0070765_100066385	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3009	Open in IMG/M
3300006176\|Ga0070765_100623090	All Organisms → cellular organisms → Bacteria → Acidobacteria	1017	Open in IMG/M
3300006893\|Ga0073928_10006862	All Organisms → cellular organisms → Bacteria	15084	Open in IMG/M
3300007982\|Ga0102924_1103113	All Organisms → cellular organisms → Bacteria → Acidobacteria	1433	Open in IMG/M
3300007982\|Ga0102924_1248388	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300009520\|Ga0116214_1272250	Not Available	646	Open in IMG/M
3300009521\|Ga0116222_1068667	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300009522\|Ga0116218_1391351	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300009552\|Ga0116138_1064602	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300009665\|Ga0116135_1114510	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300009665\|Ga0116135_1411437	Not Available	550	Open in IMG/M
3300009672\|Ga0116215_1365232	Not Available	625	Open in IMG/M
3300009700\|Ga0116217_11043453	Not Available	500	Open in IMG/M
3300010339\|Ga0074046_10155494	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300010341\|Ga0074045_10597027	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300010379\|Ga0136449_100020657	All Organisms → cellular organisms → Bacteria	16833	Open in IMG/M
3300011120\|Ga0150983_13107777	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300017822\|Ga0187802_10001356	All Organisms → cellular organisms → Bacteria → Acidobacteria	6587	Open in IMG/M
3300017822\|Ga0187802_10026444	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300017823\|Ga0187818_10009008	All Organisms → cellular organisms → Bacteria → Acidobacteria	4260	Open in IMG/M
3300017942\|Ga0187808_10440303	Not Available	599	Open in IMG/M
3300017943\|Ga0187819_10036632	All Organisms → cellular organisms → Bacteria	2901	Open in IMG/M
3300017943\|Ga0187819_10047605	All Organisms → cellular organisms → Bacteria	2543	Open in IMG/M
3300017943\|Ga0187819_10117547	All Organisms → cellular organisms → Bacteria → Acidobacteria	1587	Open in IMG/M
3300017943\|Ga0187819_10398769	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300017946\|Ga0187879_10043623	All Organisms → cellular organisms → Bacteria → Acidobacteria	2662	Open in IMG/M
3300017955\|Ga0187817_10314438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300017995\|Ga0187816_10280871	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300018008\|Ga0187888_1129459	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300018009\|Ga0187884_10140140	Not Available	1025	Open in IMG/M
3300018022\|Ga0187864_10249125	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300018040\|Ga0187862_10493914	Not Available	737	Open in IMG/M
3300018042\|Ga0187871_10007821	All Organisms → cellular organisms → Bacteria	7550	Open in IMG/M
3300018047\|Ga0187859_10075475	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300020579\|Ga0210407_10086901	All Organisms → cellular organisms → Bacteria	2362	Open in IMG/M
3300020579\|Ga0210407_10297454	All Organisms → cellular organisms → Bacteria → Acidobacteria	1260	Open in IMG/M
3300020579\|Ga0210407_10784690	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300020581\|Ga0210399_10982646	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300020582\|Ga0210395_10141759	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300020582\|Ga0210395_11158213	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300020583\|Ga0210401_10680454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300020583\|Ga0210401_10696699	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300021168\|Ga0210406_10000275	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	75241	Open in IMG/M
3300021168\|Ga0210406_10724819	Not Available	764	Open in IMG/M
3300021170\|Ga0210400_10120542	All Organisms → cellular organisms → Bacteria → Acidobacteria	2093	Open in IMG/M
3300021170\|Ga0210400_10220322	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1546	Open in IMG/M
3300021170\|Ga0210400_10263795	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300021171\|Ga0210405_10070499	All Organisms → cellular organisms → Bacteria	2756	Open in IMG/M
3300021178\|Ga0210408_10192699	All Organisms → cellular organisms → Bacteria → Acidobacteria	1620	Open in IMG/M
3300021181\|Ga0210388_10061459	All Organisms → cellular organisms → Bacteria	3149	Open in IMG/M
3300021403\|Ga0210397_10668074	Not Available	797	Open in IMG/M
3300021433\|Ga0210391_10015397	All Organisms → cellular organisms → Bacteria → Acidobacteria	6168	Open in IMG/M
3300021433\|Ga0210391_10144787	All Organisms → cellular organisms → Bacteria	1871	Open in IMG/M
3300021433\|Ga0210391_10793590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300021474\|Ga0210390_10010410	All Organisms → cellular organisms → Bacteria → Acidobacteria	7594	Open in IMG/M
3300021478\|Ga0210402_10095967	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2657	Open in IMG/M
3300021478\|Ga0210402_10807601	Not Available	863	Open in IMG/M
3300021479\|Ga0210410_10612532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300021560\|Ga0126371_12594980	Not Available	614	Open in IMG/M
3300022529\|Ga0242668_1077223	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300022532\|Ga0242655_10025669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1303	Open in IMG/M
3300022557\|Ga0212123_10455889	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M
3300022557\|Ga0212123_10543546	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300022712\|Ga0242653_1072793	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300024225\|Ga0224572_1010987	All Organisms → cellular organisms → Bacteria → Acidobacteria	1710	Open in IMG/M
3300024225\|Ga0224572_1042062	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300027109\|Ga0208603_1060395	Not Available	570	Open in IMG/M
3300027370\|Ga0209010_1000036	All Organisms → cellular organisms → Bacteria	70868	Open in IMG/M
3300027545\|Ga0209008_1151439	Not Available	509	Open in IMG/M
3300027567\|Ga0209115_1005257	Not Available	2615	Open in IMG/M
3300027570\|Ga0208043_1135762	Not Available	647	Open in IMG/M
3300027604\|Ga0208324_1036243	All Organisms → cellular organisms → Bacteria → Acidobacteria	1471	Open in IMG/M
3300027625\|Ga0208044_1000081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	100774	Open in IMG/M
3300027674\|Ga0209118_1000018	All Organisms → cellular organisms → Bacteria	134369	Open in IMG/M
3300027729\|Ga0209248_10069322	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300027737\|Ga0209038_10017285	Not Available	2121	Open in IMG/M
3300027768\|Ga0209772_10205051	Not Available	624	Open in IMG/M
3300027826\|Ga0209060_10126817	All Organisms → cellular organisms → Bacteria → Acidobacteria	1188	Open in IMG/M
3300027829\|Ga0209773_10070324	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300027853\|Ga0209274_10059454	All Organisms → cellular organisms → Bacteria	1830	Open in IMG/M
3300027854\|Ga0209517_10053837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3006	Open in IMG/M
3300027855\|Ga0209693_10183559	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300027867\|Ga0209167_10020331	All Organisms → cellular organisms → Bacteria → Acidobacteria	3155	Open in IMG/M
3300027889\|Ga0209380_10080236	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300027894\|Ga0209068_10011549	All Organisms → cellular organisms → Bacteria	4202	Open in IMG/M
3300028906\|Ga0308309_10099720	All Organisms → cellular organisms → Bacteria	2243	Open in IMG/M
3300028906\|Ga0308309_10216420	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300030707\|Ga0310038_10321414	Not Available	692	Open in IMG/M
3300030730\|Ga0307482_1148854	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300030743\|Ga0265461_10793654	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300031090\|Ga0265760_10000724	All Organisms → cellular organisms → Bacteria	9406	Open in IMG/M
3300031708\|Ga0310686_103366948	All Organisms → cellular organisms → Bacteria	6557	Open in IMG/M
3300031708\|Ga0310686_117194760	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3475	Open in IMG/M
3300031753\|Ga0307477_10057184	All Organisms → cellular organisms → Bacteria	2684	Open in IMG/M
3300031754\|Ga0307475_10534315	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300031823\|Ga0307478_10236563	All Organisms → cellular organisms → Bacteria → Acidobacteria	1480	Open in IMG/M
3300032160\|Ga0311301_10040385	All Organisms → cellular organisms → Bacteria	11292	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.43%
Host-Associated	Host-Associated	1.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.87%
Aquatic	Environmental → Aquatic	27.56%
Plants	Host-Associated → Plants	1.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.87%
Freshwater	Environmental → Aquatic → Freshwater	22.83%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.57%
Sediment	Environmental → Aquatic → Sediment	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.88%
Loam	Environmental → Terrestrial → Soil → Loam	24.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	24.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.87%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.05%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	13.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.02%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.24%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.87%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.09%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.30%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.51%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.15%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.36%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.57%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001082	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12664J13189_10019593	3300001082	Forest Soil	MTKRVTAQQKRTVERRREHNRKHTLLRRECYKWLRKNMPDVYAKLRKKAGLAQTGRPKG*
JGI12269J14319_100690983	3300001356	Peatlands Soil	MKKQLTAQEKRYVERRRDHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKAGRPKG*
JGI12635J15846_100075023	3300001593	Forest Soil	MKKRVTTQEKHTVERRREHNRKHTLLRRECYKWLRXNLPEVYSKLRKKAGLAQTGRPKG*
JGIcombinedJ26739_1014265862	3300002245	Forest Soil	MKKQLTAQEKRYADRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKTGRPKS*
JGIcombinedJ51221_100223833	3300003505	Forest Soil	MKKRLTAQEKNYLERRRQHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLKQTGRPKS*
JGIcombinedJ51221_101474992	3300003505	Forest Soil	MKKRLTAQEKDYLERRRQHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLKQTGRPKS*
JGIcombinedJ51221_103063832	3300003505	Forest Soil	MKKRIASPEKRSALRRQEHNRKHTLLRRECYKWLRKNMPEVYEKLRKKAGLTKPGRPKA*
Ga0062385_100049533	3300004080	Bog Forest Soil	MKKRLTTQEKHTVERRREHNRKHTLLRRECYKWLRKNLPEVYTKLRKKAGLAQTGRPKG*
Ga0062385_103242061	3300004080	Bog Forest Soil	MKKRLTVQEKRTQERRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKG*
Ga0062389_1009273712	3300004092	Bog Forest Soil	MKKKRLTAQQSRTQERRRTHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLARTGRPKN
Ga0062389_1013227012	3300004092	Bog Forest Soil	MKKRLTAQEIRTQDRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKA*
Ga0062386_1001393012	3300004152	Bog Forest Soil	MKKKRPTAQQVRTLERRRTHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLVRSGRPKT
Ga0058899_119863182	3300004631	Forest Soil	MKKRLTAQEKNYQERRRQHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLKQTGRPKS*
Ga0058899_121103492	3300004631	Forest Soil	MKKRLTAQEKRYVERRRDHNRKHTLLRRECYKWLRKNLPEVYEKLRKKAGLAKTGRPKG*
Ga0070734_100924782	3300005533	Surface Soil	MKKRLTVPEKRSAMRRQEHNRKHTLLRRECYKWLRKNMPEIYEKLRRKAGLTKPGRPKV*
Ga0070735_102538682	3300005534	Surface Soil	MKKRLTVPEKRSAMRRQEHNRKHTLLRRECYKWLRKNMPEIYEKLRRKAGLTKPGRPKA*
Ga0070731_101389642	3300005538	Surface Soil	MKKRLTAQEKNYLERRRQHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLKQSGRPKS*
Ga0070733_100017999	3300005541	Surface Soil	MKKKLTAQQKRTVDRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRRKAGLAQTGRPKS*
Ga0070732_100151592	3300005542	Surface Soil	MKKQLTAQEKRYLMRRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLARTGRPKG*
Ga0070732_109208671	3300005542	Surface Soil	RLTAQEKNYLERRRQHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLKQSGRPKS*
Ga0070761_100047812	3300005591	Soil	MKKRVTTQEKHTVERRREHNRKHTLLRRECYKWLRKNLPEVYSKLRKKAGLAQTGRPKG*
Ga0070761_101270232	3300005591	Soil	MKKKLTAQQKLTVDRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKG*
Ga0070762_100001245	3300005602	Soil	MKKRLTAQQKLTVERRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKS*
Ga0070762_100184625	3300005602	Soil	MKKRLTAQEKRYEERRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLMPTGRPKV*
Ga0070762_103458592	3300005602	Soil	MTKKLTAQQKRTVDRSREHNRKHTLLRRECYKWLRKNLPDIYAKLRKKAGLAETGRPKA*
Ga0070763_103274722	3300005610	Soil	MKKRLTTQEKHTVERRREHNRKHTLLRRECYKWLRKNLPEVYSKLRKKAGLAQTGRPKG*
Ga0070764_100279733	3300005712	Soil	MKKRLTAQEKRYEERRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLMPTGRPKA*
Ga0070764_101706882	3300005712	Soil	MKKKLTAQQKRTVDRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKG*
Ga0070766_101378141	3300005921	Soil	MKKRVTTQEKHTVERRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLAQ
Ga0070766_111341551	3300005921	Soil	MKKRLTAQEKRYVDRRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLAKTGRPKE*
Ga0070765_1000663854	3300006176	Soil	MKKRVTTQEKHTVERRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLAQTGRPKG*
Ga0070765_1006230902	3300006176	Soil	MKKRLTAQEKLYVERRREHNRKHTLLRRECYKWLRKNLPEVYEKLRKKAGLAKTGRPKD*
Ga0073928_1000686210	3300006893	Iron-Sulfur Acid Spring	MKKQLTPPEKRSTLRRQEHNRKHTLLRRECYKWLRKNMPEVYEKLRKKAGLTRPGRPKA*
Ga0102924_11031131	3300007982	Iron-Sulfur Acid Spring	MKKRLTSPEKLRALRRQEHNRKHTLLRRECYKWLRKNLPGVYEKLRKKAGLTKPGRPRI*
Ga0102924_12483881	3300007982	Iron-Sulfur Acid Spring	MKKRLTPIEKRSALRRQEHNRKHTLLRRECYKWLRKNLPEVYEKLRKKAGLIRPGRPKA*
Ga0116214_12722502	3300009520	Peatlands Soil	MKKQLTAQEKRYVERRRDHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLGKPGRPKR*
Ga0116222_10686671	3300009521	Peatlands Soil	MKKQLTAQEKRYVERRRDHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKAGRPKR*
Ga0116218_13913512	3300009522	Peatlands Soil	MKKRLTAQQKRTLARRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLVKTGRPKA*
Ga0116138_10646022	3300009552	Peatland	MKKKLTAQQKRTVDRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKS*
Ga0116135_11145101	3300009665	Peatland	MKKKLNAQQKRTVDRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKG*
Ga0116135_14114371	3300009665	Peatland	MKKLTAQQKRTVERRREHNRKHTLLRRECYKWLRKNMPDVYAKLRKKAGLAQTGRPKG*
Ga0116215_13652322	3300009672	Peatlands Soil	MKKQLTAQEKRYVERRRDHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKAGRP
Ga0116217_110434531	3300009700	Peatlands Soil	EKSRMKKKRLTAQQVRTLERRRAHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLVRTGRPKD*
Ga0074046_101554942	3300010339	Bog Forest Soil	MKKKRLTVQQVRTQERRRAHNRKHTLLRRECYKWLRKNLPDVYEKLRKKAGLVRPGRPKR
Ga0074045_105970271	3300010341	Bog Forest Soil	PRMKKKRLTVQQVRTQERRRAHNRKHTLLRRECYKWLRKNLPDVYEKLRKKAGLVRPGRPKR*
Ga0136449_10002065718	3300010379	Peatlands Soil	MKKRLTAQQKRTLARRREHNRKHTLLRRECYKWLRKNMPDVYAKLRKKAGLVKTGRPKG*
Ga0150983_131077772	3300011120	Forest Soil	LTAQEKNYQERRRQHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLKQTGRPKS*
Ga0187802_100013569	3300017822	Freshwater Sediment	MKKRLTAQEKRYLERRRDHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKAGRPKD
Ga0187802_100264442	3300017822	Freshwater Sediment	MKKRLTAQEKNYLERRRQHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLKQTGRPKS
Ga0187818_100090084	3300017823	Freshwater Sediment	MKKQLTAQEKRYVERRRDHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKAGRPKA
Ga0187808_104403032	3300017942	Freshwater Sediment	KKRLSAQEKRYAARRRDHNRKHTLLRRECYKWLRKNLPEVYEKLRKKAGLARTGRPKR
Ga0187819_100366323	3300017943	Freshwater Sediment	MKKKRLTAQKVRTLERRRAHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLVRTGRPKG
Ga0187819_100476051	3300017943	Freshwater Sediment	LTAQEKRYGERRRDHNRKHTLLRRECYKWLRKNLPEVYEKLRKKAGLARTGRPKR
Ga0187819_101175471	3300017943	Freshwater Sediment	MKKRLSAQEKRYAARRRDHNRKHTLLRRECYKWLRKNLPEVYEKLRKKAGLARTGRPKR
Ga0187819_103987691	3300017943	Freshwater Sediment	MKKQLTAQEKRYLQRRRDHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKAGRPKD
Ga0187879_100436233	3300017946	Peatland	MKKKLTAQQKRTVDRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKS
Ga0187817_103144381	3300017955	Freshwater Sediment	TAQEKRYVERRRDHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKAGRPKG
Ga0187816_102808712	3300017995	Freshwater Sediment	MKKRLTAQEKRYVERRRDHNRKHTLLRRECYKWLRKNLPEVYEKLRKKAGLARTGRPKR
Ga0187888_11294591	3300018008	Peatland	MKKKRLTAQQVRTLERRRAHNRKHTLLRRECYKWLRKNLPDVYEKLRKKAGLVRTGRPKS
Ga0187884_101401402	3300018009	Peatland	MKKKLTAQQKRTVDRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKG
Ga0187864_102491252	3300018022	Peatland	MKKRLTAQEKRYLERRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLMQTGRPKG
Ga0187862_104939142	3300018040	Peatland	MKKKLTAQQKRTVDRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAG
Ga0187871_100078216	3300018042	Peatland	MKKKLNAQQKRTVDRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKG
Ga0187859_100754751	3300018047	Peatland	MKKLTAQQKRTVERRREHNRKHTLLRRECYKWLRKNMPDVYAKLRKKAGLAQTGRPKG
Ga0210407_100869013	3300020579	Soil	MKKRLTAQEKRYTERRREHNRKHTLLRRECYKWLRKNLPEIYAKLRKKAGLAKTGRPKS
Ga0210407_102974542	3300020579	Soil	MTKKLTASEKRYAQRRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLAKTGRPKT
Ga0210407_107846902	3300020579	Soil	MKKKRLTAQQVRTVERRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLVRAGRPKD
Ga0210399_109826461	3300020581	Soil	MKKKRLTAQQVRSQERRRTHNRKHTLLRRECYKWLRKNLPEIYTKLRKKAGLVKTGRPKG
Ga0210395_101417592	3300020582	Soil	MKKKLTAQQKRTVDRRREHNRKHTLLRRECYKWLRKNLPDIYAKLRKKAGLAETGRPKA
Ga0210395_111582132	3300020582	Soil	MKKRLTAQEKRYEERRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLMPTGRPKA
Ga0210401_106804542	3300020583	Soil	MKKRLTAQEKNYLERRRQHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLKQSGRPKS
Ga0210401_106966992	3300020583	Soil	MKKRLTAQEKDYLERRRQHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLKQTGRPKS
Ga0210406_1000027511	3300021168	Soil	MTKKLTASEKRYAQRRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLAKTGRPKA
Ga0210406_107248191	3300021168	Soil	RLTAQEKRYTERRREHNRKHTLLRRECYKWLRKNLPEIYAKLRKKAGLAKTGRPKS
Ga0210400_101205424	3300021170	Soil	MKKQLTAQEKRYADRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKTGRPKS
Ga0210400_102203222	3300021170	Soil	MKKRLTAQQKLTVERRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKS
Ga0210400_102637952	3300021170	Soil	MKKRLTAQEKRYVDRRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLAKTGRPKE
Ga0210405_100704991	3300021171	Soil	MKKRLTAQEKDYLERRRQHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLKQTGRPK
Ga0210408_101926993	3300021178	Soil	MKKRITAQQKRTLERRRQHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLVKAGR
Ga0210388_100614592	3300021181	Soil	MKKLTAQQKRTLERRREHNRKHTLLRRECYKWLRKNMPDVYTKLRKKAGLTETGRPKS
Ga0210397_106680741	3300021403	Soil	MKKRITAQQKRTLERRRQHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLAKTGRPKS
Ga0210391_100153973	3300021433	Soil	MKKRLTAQEKRYEERRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLMPTGRPKV
Ga0210391_101447872	3300021433	Soil	MKKRVTTQEKHTVERRREHNRKHTLLRRECYKWLRKNLPEVYSKLRKKAGLAQTGRPKG
Ga0210391_107935902	3300021433	Soil	MKKRLTAQEKNYQERRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGL
Ga0210390_1001041012	3300021474	Soil	MKKRLTAQEKLYVERRREHNRKHTLLRRECYKWLRKNLPEVYEKLRKKAGLAKTGRPKD
Ga0210402_100959672	3300021478	Soil	MKKRLTAQEKRTQERRRDHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLSQTGRPKG
Ga0210402_108076011	3300021478	Soil	MTKKLTASEKRYAQRRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLAKT
Ga0210410_106125322	3300021479	Soil	MKKRLTAQEKRYADRRRDHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKTGRPKGK
Ga0126371_125949802	3300021560	Tropical Forest Soil	MKKKRLTPQEVRNLERRQAHNRKHTLLRRECYKWLRKNMPDVYARLRKKAGLMRTGRPKT
Ga0242668_10772231	3300022529	Soil	MKKRLTAQEKNYLERRRQHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLKQTGRPKS
Ga0242655_100256692	3300022532	Soil	MTKRLTAQEKRYADRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKTGRPKVE
Ga0212123_104558891	3300022557	Iron-Sulfur Acid Spring	MKKRLTSPEKLRALRRQEHNRKHTLLRRECYKWLRKNLPGVYEKLRKKAGLTKPGRPRI
Ga0212123_105435462	3300022557	Iron-Sulfur Acid Spring	MKKRLTPIEKRSALRRQEHNRKHTLLRRECYKWLRKNLPEVYEKLRKKAGLIRPGRPKA
Ga0242653_10727932	3300022712	Soil	MQKRLTAQEKNYLERRRQHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLKQSGRPKS
Ga0224572_10109873	3300024225	Rhizosphere	MKKKLTAQQKRTVDRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGR
Ga0224572_10420622	3300024225	Rhizosphere	AQQKRTVDRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKG
Ga0208603_10603951	3300027109	Forest Soil	MKKRLTAQEKRYVERRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKTGRPKG
Ga0209010_10000364	3300027370	Forest Soil	MTKRVTAQQKRTVERRREHNRKHTLLRRECYKWLRKNMPDVYAKLRKKAGLAQTGRPKG
Ga0209008_11514392	3300027545	Forest Soil	MKKRLTAQEKRYVDRRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLAKT
Ga0209115_10052571	3300027567	Forest Soil	MKKRLTTQEKHTVERRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLAQTGRPKG
Ga0208043_11357622	3300027570	Peatlands Soil	MKKQLTAQEKRYVERRRDHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKAGRPKR
Ga0208324_10362431	3300027604	Peatlands Soil	MKKQLTAQEKRYVERRRDHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAKAGRPKG
Ga0208044_1000081102	3300027625	Peatlands Soil	MKKRLTAQQKRYVERRRQHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLAKTGRPKD
Ga0209118_100001813	3300027674	Forest Soil	MKKKRLTAQQVRTQKRRRAHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLVRTGRPKG
Ga0209248_100693222	3300027729	Bog Forest Soil	MKKRLTTQEKHTVERRREHNRKHTLLRRECYKWLRKNLPEVYTKLRKKAGLAQTGRPKG
Ga0209038_100172851	3300027737	Bog Forest Soil	KKRLSTQEKHTVERRREHNRKHTLLRRECYKWLRKNLPEVYTKLRKKAGLAQTGRPKG
Ga0209772_102050512	3300027768	Bog Forest Soil	MKKRLTAQEKRTLERRRQHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLVRTGRPKG
Ga0209060_101268172	3300027826	Surface Soil	MKKRLTVPEKRSAMRRQEHNRKHTLLRRECYKWLRKNMPEIYEKLRRKAGLTKPGRPKV
Ga0209773_100703243	3300027829	Bog Forest Soil	MKKKRLTAQQLHTLERRRTHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLARTGRPKN
Ga0209274_100594542	3300027853	Soil	MKKKLTAQQKLTVDRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKG
Ga0209517_100538372	3300027854	Peatlands Soil	MKKKRLTAQQVRTLERRRAHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLVRTGRPKD
Ga0209693_101835592	3300027855	Soil	MKKRLTTQEKHTVERRREHNRKHTLLRRECYKWLRKNLPEVYSKLRKKAGLAQTGRPKG
Ga0209167_100203312	3300027867	Surface Soil	MKKKLTAQQKRTVDRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRRKAGLAQTGRPKS
Ga0209380_100802363	3300027889	Soil	MKKRVTTQEKHTVERRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLAKTGRPKE
Ga0209068_100115493	3300027894	Watersheds	MKKKRLTAQQVRYLERRRTHNRKHTLLRRECYKWLRKNLPDIYAKLRKKAGLARTGRPKS
Ga0308309_100997203	3300028906	Soil	MKKRVTTQEKHTVERRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLAQTGRPKG
Ga0308309_102164201	3300028906	Soil	MKKRLTAQEKRYEERRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLMPTG
Ga0310038_103214141	3300030707	Peatlands Soil	MKKQLTAQEKRYVERRRDHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAG
Ga0307482_11488541	3300030730	Hardwood Forest Soil	MKKKLTAQEKRYTERRREHTRKHTLLRRECYKWLRKNLPEVYTKLRKKAGLAKT
Ga0265461_107936541	3300030743	Soil	KKHTAQQKRTVERRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKS
Ga0265760_100007245	3300031090	Soil	MKKRLTAPEKLYVERRREHNRKHTLLRRECYKWLRKNLPEVYEKLRRKAGLAKTGRPKD
Ga0310686_1033669488	3300031708	Soil	MKKRLTAQEKLYVERRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLAKTGRPTD
Ga0310686_1171947602	3300031708	Soil	MKKKHTAQQKRTVERRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLAQTGRPKS
Ga0307477_100571841	3300031753	Hardwood Forest Soil	MKKQLTAQEKRYVMRRREHNRKHTLLRRECYKWLRKNLPEVYAKLRKKAGLARTGRPKG
Ga0307475_105343151	3300031754	Hardwood Forest Soil	RMKKQLTAQEKRYVMRRREHNRKHTLLRRECYKWLRKNLPDVYAKLRKKAGLARTGRPKG
Ga0307478_102365632	3300031823	Hardwood Forest Soil	MKKRLTAQEKLYVERRREHNRKHTLLRRECYKWLRKNLPEVYEKLRKKAGLAKTGRPTD
Ga0311301_100403852	3300032160	Peatlands Soil	MKKRLTAQQKRTLARRREHNRKHTLLRRECYKWLRKNMPDVYAKLRKKAGLVKTGRPKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065983

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences