NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F066048

Metagenome / Metatranscriptome Family F066048

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F066048
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 93 residues
Representative Sequence MQEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDHHKRPTPIGETLRGTLLYQKRRPKSAKPACPTALDRREVLPISGRPGFGKLV
Number of Associated Samples 97
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 85.04 %
% of genes near scaffold ends (potentially truncated) 27.56 %
% of genes from short scaffolds (< 2000 bps) 71.65 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.638 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(21.260 % of family members)
Environment Ontology (ENVO) Unclassified
(29.134 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.669 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 42.62%    β-sheet: 0.00%    Coil/Unstructured: 57.38%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF09364XFP_N 18.11
PF13545HTH_Crp_2 10.24
PF12900Pyridox_ox_2 3.15
PF00871Acetate_kinase 1.57
PF00282Pyridoxal_deC 1.57
PF07228SpoIIE 1.57
PF00027cNMP_binding 0.79
PF13030DUF3891 0.79
PF01152Bac_globin 0.79
PF02702KdpD 0.79
PF01435Peptidase_M48 0.79
PF13607Succ_CoA_lig 0.79
PF06537DHOR 0.79
PF00107ADH_zinc_N 0.79
PF13450NAD_binding_8 0.79
PF00355Rieske 0.79
PF09363XFP_C 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 1.57
COG0282Acetate kinaseEnergy production and conversion [C] 1.57
COG3426Butyrate kinaseEnergy production and conversion [C] 1.57
COG2205K+-sensing histidine kinase KdpDSignal transduction mechanisms [T] 0.79
COG2346Truncated hemoglobin YjbIInorganic ion transport and metabolism [P] 0.79
COG3488Uncharacterized conserved protein with two CxxC motifs, DUF1111 familyGeneral function prediction only [R] 0.79

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.64 %
UnclassifiedrootN/A2.36 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2189573000|GPBTN7E02G5L5JAll Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300001593|JGI12635J15846_10009080All Organisms → cellular organisms → Bacteria → Proteobacteria8441Open in IMG/M
3300001593|JGI12635J15846_10554985All Organisms → cellular organisms → Bacteria → Acidobacteria672Open in IMG/M
3300001867|JGI12627J18819_10272532All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300002909|JGI25388J43891_1008948All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1909Open in IMG/M
3300002911|JGI25390J43892_10009139All Organisms → cellular organisms → Bacteria2291Open in IMG/M
3300004082|Ga0062384_100873769All Organisms → cellular organisms → Bacteria → Acidobacteria634Open in IMG/M
3300004092|Ga0062389_101084600All Organisms → cellular organisms → Bacteria → Acidobacteria986Open in IMG/M
3300005176|Ga0066679_10043613Not Available2547Open in IMG/M
3300005178|Ga0066688_10320277All Organisms → cellular organisms → Bacteria1002Open in IMG/M
3300005434|Ga0070709_11212371All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300005439|Ga0070711_100234855All Organisms → cellular organisms → Bacteria → Acidobacteria1431Open in IMG/M
3300005445|Ga0070708_101447242All Organisms → cellular organisms → Bacteria → Acidobacteria641Open in IMG/M
3300005471|Ga0070698_101365599All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300005537|Ga0070730_10222725All Organisms → cellular organisms → Bacteria → Acidobacteria1252Open in IMG/M
3300005569|Ga0066705_10663544All Organisms → cellular organisms → Bacteria → Acidobacteria632Open in IMG/M
3300005574|Ga0066694_10008726All Organisms → cellular organisms → Bacteria4265Open in IMG/M
3300006162|Ga0075030_100406580All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1085Open in IMG/M
3300006173|Ga0070716_101111410All Organisms → cellular organisms → Bacteria → Acidobacteria631Open in IMG/M
3300006175|Ga0070712_100010916All Organisms → cellular organisms → Bacteria5744Open in IMG/M
3300009038|Ga0099829_10083002All Organisms → cellular organisms → Bacteria2459Open in IMG/M
3300009088|Ga0099830_10512051All Organisms → cellular organisms → Bacteria → Acidobacteria980Open in IMG/M
3300009088|Ga0099830_10649505All Organisms → cellular organisms → Bacteria → Acidobacteria867Open in IMG/M
3300009088|Ga0099830_11445164Not Available572Open in IMG/M
3300009088|Ga0099830_11564623All Organisms → cellular organisms → Bacteria → Acidobacteria549Open in IMG/M
3300009089|Ga0099828_11209839All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300009090|Ga0099827_11773904All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300011120|Ga0150983_14571294All Organisms → cellular organisms → Bacteria → Acidobacteria520Open in IMG/M
3300011270|Ga0137391_10936054All Organisms → cellular organisms → Bacteria → Acidobacteria707Open in IMG/M
3300011271|Ga0137393_10087768All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2515Open in IMG/M
3300012096|Ga0137389_11333186All Organisms → cellular organisms → Bacteria → Acidobacteria612Open in IMG/M
3300012189|Ga0137388_10404250All Organisms → cellular organisms → Bacteria1264Open in IMG/M
3300012189|Ga0137388_10415926All Organisms → cellular organisms → Bacteria → Acidobacteria1245Open in IMG/M
3300012189|Ga0137388_10529657All Organisms → cellular organisms → Bacteria1095Open in IMG/M
3300012189|Ga0137388_10764908All Organisms → cellular organisms → Bacteria → Acidobacteria896Open in IMG/M
3300012189|Ga0137388_11118276All Organisms → cellular organisms → Bacteria → Acidobacteria725Open in IMG/M
3300012198|Ga0137364_10211525All Organisms → cellular organisms → Bacteria1424Open in IMG/M
3300012202|Ga0137363_10003902All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae9105Open in IMG/M
3300012206|Ga0137380_10204986All Organisms → cellular organisms → Bacteria1788Open in IMG/M
3300012285|Ga0137370_10158635All Organisms → cellular organisms → Bacteria1312Open in IMG/M
3300012351|Ga0137386_10797231All Organisms → cellular organisms → Bacteria → Acidobacteria678Open in IMG/M
3300012356|Ga0137371_10016633All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5650Open in IMG/M
3300012359|Ga0137385_11131020All Organisms → cellular organisms → Bacteria → Acidobacteria643Open in IMG/M
3300012363|Ga0137390_11261933All Organisms → cellular organisms → Bacteria → Acidobacteria685Open in IMG/M
3300012918|Ga0137396_10012266All Organisms → cellular organisms → Bacteria5287Open in IMG/M
3300014969|Ga0157376_12316582All Organisms → cellular organisms → Bacteria → Acidobacteria576Open in IMG/M
3300016270|Ga0182036_10385173All Organisms → cellular organisms → Bacteria → Acidobacteria1089Open in IMG/M
3300016319|Ga0182033_10187242All Organisms → cellular organisms → Bacteria1635Open in IMG/M
3300016387|Ga0182040_11394985All Organisms → cellular organisms → Bacteria → Acidobacteria593Open in IMG/M
3300018433|Ga0066667_11382155All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300019887|Ga0193729_1008978All Organisms → cellular organisms → Bacteria → Acidobacteria4581Open in IMG/M
3300020579|Ga0210407_10339662All Organisms → cellular organisms → Bacteria → Acidobacteria1174Open in IMG/M
3300020579|Ga0210407_10536034All Organisms → cellular organisms → Bacteria → Acidobacteria914Open in IMG/M
3300020580|Ga0210403_10161631All Organisms → cellular organisms → Bacteria1833Open in IMG/M
3300020580|Ga0210403_10712308All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300020581|Ga0210399_10108466All Organisms → cellular organisms → Bacteria2275Open in IMG/M
3300020581|Ga0210399_10558727All Organisms → cellular organisms → Bacteria → Acidobacteria948Open in IMG/M
3300020582|Ga0210395_10404962All Organisms → cellular organisms → Bacteria1026Open in IMG/M
3300021168|Ga0210406_10001309All Organisms → cellular organisms → Bacteria30921Open in IMG/M
3300021170|Ga0210400_10557229All Organisms → cellular organisms → Bacteria → Acidobacteria945Open in IMG/M
3300021180|Ga0210396_10880648All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300021401|Ga0210393_10616018All Organisms → cellular organisms → Bacteria → Acidobacteria886Open in IMG/M
3300021404|Ga0210389_10007450All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae8478Open in IMG/M
3300021405|Ga0210387_10000061All Organisms → cellular organisms → Bacteria77952Open in IMG/M
3300021405|Ga0210387_10117775All Organisms → cellular organisms → Bacteria2240Open in IMG/M
3300021407|Ga0210383_10355002All Organisms → cellular organisms → Bacteria1264Open in IMG/M
3300021420|Ga0210394_10000086All Organisms → cellular organisms → Bacteria226010Open in IMG/M
3300021476|Ga0187846_10375119All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300021477|Ga0210398_10279552All Organisms → cellular organisms → Bacteria → Acidobacteria1361Open in IMG/M
3300021478|Ga0210402_10142143All Organisms → cellular organisms → Bacteria2182Open in IMG/M
3300021478|Ga0210402_10703560All Organisms → cellular organisms → Bacteria → Acidobacteria933Open in IMG/M
3300022528|Ga0242669_1043663All Organisms → cellular organisms → Bacteria → Acidobacteria746Open in IMG/M
3300022708|Ga0242670_1017934All Organisms → cellular organisms → Bacteria → Acidobacteria820Open in IMG/M
3300022713|Ga0242677_1008122All Organisms → cellular organisms → Bacteria → Acidobacteria1087Open in IMG/M
3300022726|Ga0242654_10407241All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300025906|Ga0207699_10800624All Organisms → cellular organisms → Bacteria → Acidobacteria693Open in IMG/M
3300025910|Ga0207684_10714559All Organisms → cellular organisms → Bacteria → Acidobacteria851Open in IMG/M
3300025915|Ga0207693_10016257All Organisms → cellular organisms → Bacteria5949Open in IMG/M
3300026277|Ga0209350_1000096All Organisms → cellular organisms → Bacteria55773Open in IMG/M
3300026314|Ga0209268_1010577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria3729Open in IMG/M
3300026324|Ga0209470_1019954All Organisms → cellular organisms → Bacteria3652Open in IMG/M
3300026530|Ga0209807_1014530All Organisms → cellular organisms → Bacteria3867Open in IMG/M
3300026551|Ga0209648_10066781All Organisms → cellular organisms → Bacteria3036Open in IMG/M
3300026551|Ga0209648_10170108All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1699Open in IMG/M
3300026551|Ga0209648_10736279All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300026552|Ga0209577_10164599Not Available1732Open in IMG/M
3300027376|Ga0209004_1072333All Organisms → cellular organisms → Bacteria → Acidobacteria583Open in IMG/M
3300027562|Ga0209735_1000083All Organisms → cellular organisms → Bacteria14035Open in IMG/M
3300027562|Ga0209735_1000113All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae12566Open in IMG/M
3300027562|Ga0209735_1124294All Organisms → cellular organisms → Bacteria → Acidobacteria562Open in IMG/M
3300027591|Ga0209733_1004381All Organisms → cellular organisms → Bacteria3531Open in IMG/M
3300027635|Ga0209625_1001606All Organisms → cellular organisms → Bacteria5257Open in IMG/M
3300027846|Ga0209180_10249226All Organisms → cellular organisms → Bacteria1022Open in IMG/M
3300027857|Ga0209166_10136770All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300027862|Ga0209701_10281799All Organisms → cellular organisms → Bacteria → Acidobacteria961Open in IMG/M
3300027875|Ga0209283_10427967All Organisms → cellular organisms → Bacteria → Acidobacteria860Open in IMG/M
3300028047|Ga0209526_10668410All Organisms → cellular organisms → Bacteria → Acidobacteria658Open in IMG/M
3300030848|Ga0075388_11457819All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300031057|Ga0170834_111326406All Organisms → cellular organisms → Bacteria → Acidobacteria1490Open in IMG/M
3300031057|Ga0170834_114031872All Organisms → cellular organisms → Bacteria → Acidobacteria781Open in IMG/M
3300031122|Ga0170822_11212144All Organisms → cellular organisms → Bacteria → Acidobacteria1216Open in IMG/M
3300031122|Ga0170822_15743181All Organisms → cellular organisms → Bacteria → Acidobacteria1056Open in IMG/M
3300031128|Ga0170823_10958093All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300031128|Ga0170823_17610854All Organisms → cellular organisms → Bacteria → Acidobacteria823Open in IMG/M
3300031231|Ga0170824_114009886All Organisms → cellular organisms → Bacteria → Acidobacteria504Open in IMG/M
3300031231|Ga0170824_118099733All Organisms → cellular organisms → Bacteria → Acidobacteria1343Open in IMG/M
3300031231|Ga0170824_126711834All Organisms → cellular organisms → Bacteria → Acidobacteria1781Open in IMG/M
3300031446|Ga0170820_12105160All Organisms → cellular organisms → Bacteria → Acidobacteria898Open in IMG/M
3300031469|Ga0170819_17988415All Organisms → cellular organisms → Bacteria2587Open in IMG/M
3300031474|Ga0170818_102945435All Organisms → cellular organisms → Bacteria1549Open in IMG/M
3300031715|Ga0307476_10094846All Organisms → cellular organisms → Bacteria2100Open in IMG/M
3300031720|Ga0307469_10342579All Organisms → cellular organisms → Bacteria1251Open in IMG/M
3300031753|Ga0307477_10393808All Organisms → cellular organisms → Bacteria → Acidobacteria949Open in IMG/M
3300031753|Ga0307477_10994152All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300031753|Ga0307477_11135974All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300031754|Ga0307475_10014502All Organisms → cellular organisms → Bacteria5363Open in IMG/M
3300031754|Ga0307475_10022189All Organisms → cellular organisms → Bacteria4485Open in IMG/M
3300031945|Ga0310913_11048118All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300031962|Ga0307479_10018903All Organisms → cellular organisms → Bacteria6496Open in IMG/M
3300031962|Ga0307479_10029343All Organisms → cellular organisms → Bacteria5241Open in IMG/M
3300031962|Ga0307479_10082011All Organisms → cellular organisms → Bacteria3121Open in IMG/M
3300032174|Ga0307470_10280072All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300032180|Ga0307471_100190193All Organisms → cellular organisms → Bacteria2038Open in IMG/M
3300032180|Ga0307471_102256188All Organisms → cellular organisms → Bacteria → Acidobacteria686Open in IMG/M
3300032180|Ga0307471_102569025All Organisms → cellular organisms → Bacteria → Acidobacteria645Open in IMG/M
3300032180|Ga0307471_102599463All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300032261|Ga0306920_101766712All Organisms → cellular organisms → Bacteria → Acidobacteria874Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil21.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil19.68%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil11.81%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil9.45%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil8.66%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.30%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.15%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.57%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.57%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.79%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.79%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2189573000Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300002909Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cmEnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022708Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022713Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027376Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027635Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300030848Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
N55_116720502189573000Grass SoilSRERCKMHEDERDLLEVLIFEEIEETVGTWLRAIIQRLEREQTAIRTDHREQRTPGGEKLKGTLLYQRRHPNSAKPACPTALDRRQVLPISGRSGFGKLV
JGI12635J15846_1000908023300001593Forest SoilMQEDERDLLEVLIFDEIEETVGTWLRATIQRLEKEQAAIQRDHRKQPTPSGETLRGTPLYQKQHPKCTKLTSPTALGRRRQVLPISGRSGFGKLA*
JGI12635J15846_1055498513300001593Forest SoilMKQEERDVLEVLKFDLIEETLGSWLRAIIQRLEKEQTAIRRHQQKQGTPSHETLRGTPLYQKHHPKPAKLACLTALDRRRQVLPISGRSG
JGI12627J18819_1027253213300001867Forest SoilMQEDGRDVLEVLIFDEIEETVGTWLCAVIQRLEKEQTAIRRDHHKQPTPGGETLREMSVYRKPHPKCEKSTLPPELDR
JGI25388J43891_100894813300002909Grasslands SoilMQENERDLLEVLIFDEVEETVGIWLRAIIQRLEEEQTAIRRDYDKRPTSSGETLTAMPLSQKHHPKSPKPAGLTVLDRRRQVLPIWPIRFWSTRVK
JGI25390J43892_1000913913300002911Grasslands SoilMQENERDLLEVLIFDEVEETVGIWLRAIIQRLEEEQTAIRRDYDKRPTSSGETLTAMPLSQKHHPKSPKPAGLTVLDRRRQVLPIWPIRFWSTRVKAPLQSLP*
Ga0062384_10087376913300004082Bog Forest SoilAYFESRARCKMQEEERDLMEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDHHTHQTPSGETLTGMFLDQKQHPKCAKPTSPTDLDRGRQVVPISARSGFRKLA*
Ga0062389_10108460023300004092Bog Forest SoilMQEDERDVLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDHHTHQTPSGETLTGMFLDQKQHPKCAKPTSPTDLDRGRQVVPISARSGFRKLA*
Ga0066679_1004361323300005176SoilILWEVRMQEDERDVLEVLIFDEIEETVGLLRAIIQRLEKEQTAIRRDHHTQQTPSGETLTGMFRYQKQHPKCAKPTSPTDLDRGRQVVPISARSGFRKLV*
Ga0066688_1032027713300005178SoilLEVLIFAEVEETVGIWLRAIIQRLEKEPTAIRRDYDKRPTSSGETLTAMPLSQKHHPKSPKPAGLTVLDRRRQVLPI
Ga0070709_1121237113300005434Corn, Switchgrass And Miscanthus RhizosphereMQEDERDLMEVLIFDEIEETVGTWLRTIIQRLEKEQTAIRRDHCKQRTPGGGKLTGTLHYQRHHPKSAKPARPTALDRRQVLPISGRSGVGKWESFND*
Ga0070711_10023485513300005439Corn, Switchgrass And Miscanthus RhizosphereMQEDERDLMEVLIFDEIEETVGTWLRAIIRRLEKEQAAIRRDHCKQPTLSGETLRGTPLYQKQHPKCAKRTSPTALDRRRHVLPSSSRSGFGKLE*
Ga0070708_10144724213300005445Corn, Switchgrass And Miscanthus RhizosphereMQEDERDLMEVLIFDEIEETVGTWLRTIIQRLEKEQTAIRRDHCKQRTPGGGKLTGTLHYQRHHPKSAKPARPTALDRRQVLPISGRSGVGKWE
Ga0070698_10136559923300005471Corn, Switchgrass And Miscanthus RhizosphereMQEDDRDLLEVLIFDEIEETIGTWLRTIIQRLEKEQTATRTNYHKQSTPTSETVRRTLLHQKHHSKCAKPTCPTVLDRRR
Ga0070730_1022272533300005537Surface SoilMQEDECDLLEVLIFDEIEETVGTWLRAIIQRLEKEQAAIRRDHRKQPTPSAETLGGAPLYQKHHPKCTKLTSATALGRRRQVLPISGRSGFGKLA*
Ga0066705_1066354413300005569SoilMQEDERDTLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDHHTQQTPSGETLTEMFLYQKQHPKCAKPTSPTDLDGGRQVVPISARSRFRKLV*
Ga0066694_1000872633300005574SoilMQENERDLLEVLIFDEVEETVGIWLRAIIQRLEEEQTAIRRDYDKRPTSSGETLTAMPLSQKHHPKSPKPAGLTVLDRRRQVLPISGRSGFGQLG*
Ga0075030_10040658023300006162WatershedsMQKDERDLLEVLIFDEIEDTVGTWLRAIIQRLEKEQTAMRRDLHRQPTPIGKTLRGALLCQKRHSNSAKPACPAALDRPREVLPISGRSGFGKLV*
Ga0070716_10111141013300006173Corn, Switchgrass And Miscanthus RhizosphereMQEDERYLLEVLIFDEIEETVGTWLRTIIQRLEKEQTAIRRDHCKQRSPGGGKLTGTLLYQRHHPKSAKPARPTALDRRQVLPISGRSGVGKWESFND*
Ga0070712_10001091653300006175Corn, Switchgrass And Miscanthus RhizosphereMHEDERDLLEALIFEEIEETVGTWLRAIIQRLEKEQTAIRRDHREQRTPGGEKLKGTLLYQRRHPNSAKSAWPTALDRRQVLPISGRSGFGKLV*
Ga0099829_1008300223300009038Vadose Zone SoilMQEDERDILEVLIFDEIEETVGTWLRTIIQRLEKEQTAIRRDHHKQPNPSGETLAGMLLYQKQHPKCAKPTFPTEVDRRRQVVPISGRSGFGKFV*
Ga0099830_1051205113300009088Vadose Zone SoilMQEDERDILEVLIFDEIEETVGTWLRTIIQRLEKEQTVIRRDHHRQPNPSGQTLRGVLPYQKQHSKCAKSTSPTELDRRQVVPISGRSGFGKFV*
Ga0099830_1064950513300009088Vadose Zone SoilMQEDGRDVLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRGHHKQPTPSGETLREMPFYQKQHPKCAKSTSPTELDRRRQVVPISGRSGFGKFV*
Ga0099830_1144516423300009088Vadose Zone SoilMQEDERDVMEVLIFDEIEETVGTWLRAIIRRLEKQQTAIRRDYHQQPTPSPETLREMPLYQKQRPKCAKPTSPTELDRRRQVVPISRRSGFGKFV*
Ga0099830_1156462313300009088Vadose Zone SoilMQEDESDILEVLIFDEIEETVGTWLRTIIQRLEREQTAIRREHRKQPTSNRQTLTAMPLYQQHHPKSAKPACLTVLDRRRQVLPISGRPGFGQRG*
Ga0099828_1120983923300009089Vadose Zone SoilLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDHHKQPTPSGESLRGTLLFQKHYPKCEKPTCPTALDRRRQVVPISGRSGFGHGNNSTADAPSEIHGVRH*
Ga0099827_1177390413300009090Vadose Zone SoilMQEDERDLLEVLIFDEIEETVGTWLRAIIQHLEKEQTAIRRDQHKQPARGRETFGGTSLYRKHHRTCAKPACPTALDRRRQVLPISGPSGFGK
Ga0150983_1457129413300011120Forest SoilMMQEDERDVLEVLIFEEMEETVGTWLRAIIQRLEKEQTAIRRDQHKQPIPGRETLRGTLLYRKQHPKCAKLTSPTALDRRRQVLSISGRSGFGKLA*
Ga0137391_1093605423300011270Vadose Zone SoilRRAYFELGRRCRMQEDEHDLLEVLIFDEIEETVGTWLRAIIQHLEKQRTAIRRDQHKQPALVRETFRGTPLYRKHHPKCAKPACPTALDRRQVLPISGRSGFGKLV*
Ga0137393_1008776813300011271Vadose Zone SoilMQEDERDILEVLIFDEIEETVGTWLRTIIQRLEKEQTAIRRDHHKQPKPKRRNIGRNAPLPEAAPECAKPTFPTEVDRRRQVVPISGRSGFGKFV*
Ga0137389_1133318613300012096Vadose Zone SoilETVGTWLRAIIQRLEKEQTAIRRDHHKQPTPSGESLRGTLLFQKHYPKCEKPTCPTALDRRRQVVPISGRSGFGHGNNSTADAPSEIHGVRH*
Ga0137388_1040425023300012189Vadose Zone SoilGRRKMREDERDILEVLIFDEIEETVGTWLRTIIQRLEKEQTAIRRDHHKQPKPKRRNIGRNAPLPEAAPECAKPTFPTEVDRRRQVVPISGRSGFGKFM*
Ga0137388_1041592623300012189Vadose Zone SoilMQEGERDVLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDHHKQPTPSGESLRGTLLFQKHYPKCEKPTCPTALDRRRQVVPISGRSGFGHGNNSTADAPSEIHGVRH*
Ga0137388_1052965723300012189Vadose Zone SoilMQEDERDLLEVLIFDEIEDTVGTWLRAIIQRLEKEQTAIRRNYHKLPNPIGETLRGTLLYQKRHPKSAKPRCPTALDRPRKVLPISGRSGFGKLV*
Ga0137388_1076490823300012189Vadose Zone SoilMQEDERDILEVLIFDEIEETVGTWLRTIIQRLEKEQAAIRRDHHKQPNPSGETLRGMLLDQKQHPKCAKPMFPTEVDRRRQVVPISGRSGFGKFVVRAALHSLP*
Ga0137388_1111827613300012189Vadose Zone SoilMQEDERDLLEVLIFDEIEETVGTWLRAIIQHLEKEQTAIRRDQHKQPALVRETFKGIPLYRKHHPKSVMPACPTALDRRRQVLPISGRSGFGKLV*
Ga0137364_1021152513300012198Vadose Zone SoilMQEDERDLLEVLVFDEIEETVGTWLRAIIQHLEKQQTAIRRHQHKQPARGRETFRGTPFYRKHHPKCAKPACPTALDLRPQVLPISGPSGFGKWE*
Ga0137363_1000390283300012202Vadose Zone SoilMQEDERDLLEVLIFDEIEETVGTWLRAIIQHLEKQRTAIRRDQHKQPALVRETFRGTPLYRKHHPKCAKPACPTALDRRQVLPISGRSGFGKLV*
Ga0137380_1020498623300012206Vadose Zone SoilMQEDERDVLEVLLFDEIEETVGAWPRAIIQRLEKEQTAIRRDHHTQQTPGGETLTGMFLYQKQHPRCAKPTSPTELDRGRQVVPISARSGFRKLV*
Ga0137370_1015863523300012285Vadose Zone SoilMQEDERDLLEVLGFDEIEETVGTWLRAIIQHLEKQQTAIRRHQHKQPARGRETFRGTPFYRKHHPKCAKPACPTALDLRPQVLPISGPSGFGKWE*
Ga0137386_1079723113300012351Vadose Zone SoilYFESCGTCEMQEDERDVLEVLLFDEIEETVGAWPRAIIQRLEKEQPAVRRDHHTQQTPGGETLTGMFLYQKQHPRCAKPTSPTELDRGRQVVPISARSGFRKLV*
Ga0137371_1001663313300012356Vadose Zone SoilMQEDERDVLEVLIFDEIEETVGTCLRAIIQRLEKEQTAIRRDHHTQQTPSGETLTVMFLYQKQHPKCAKPTSPTELDRGRQVVPISARSGFRKLV*
Ga0137385_1113102013300012359Vadose Zone SoilMQEDERDLLEVLIFDEIEETVGTWLRAIIQHLEKEQTAIRRDQHKQPARGRETFGGTSLYRKHHRTCAKPACPTALDRRQVLPISGPSGFGKLA*
Ga0137390_1126193313300012363Vadose Zone SoilMQEDESDILEVLIFDEIEETVGTWLRTIIQRLEREQTAIRREHRKQPTSNRQTLTAMPLYQQHHPKSAKPACLTVLDRRRQVLPISGRRGFGQRG*
Ga0137396_1001226633300012918Vadose Zone SoilMQEDERDVLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRGDHHTQQIPSGETLTGVFLYQKRHPKCAKPTSPTDLDRGAACSSDFGPVRLA*
Ga0157376_1231658213300014969Miscanthus RhizosphereMSAILEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDHHKRPAPIGKTLRGTLLYQKRRPKSAKPACPTALDGRQALPIPVRSGVGKWKSFKRLI
Ga0182036_1038517313300016270SoilMHEDERDLLEVLIFDEIEERVGTWLRAIIQRLEKEQTAIRRDHRKQRTSGGEKLKGTLLYQRRHPNSAKPACPTALDRRQVLPISG
Ga0182033_1018724213300016319SoilMHEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKERTAIRRDHRKQRTSGGEKLKGTLLYQRRHPNSAKPACPTALDRRQVLPISG
Ga0182040_1139498523300016387SoilMHEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDHRKQRTSGGEKLKGTLLYQRRHPNSAKPACPTALDRR
Ga0066667_1138215513300018433Grasslands SoilLEVLIFAEVEETVGIWLRAIIQRLEEEQTAIRRDYDKRPTSSGETLTAMPLSQKHHPKSPKPAGLTVLDRRRQVLPI
Ga0193729_100897843300019887SoilMQEDERDLLEVLIFYEIEETIGTWLRTIIQRLEKEQTDIRKDYDKRPTSSGGTLTAMPCTRSTIQSPQSRRVTVLDRRRQVLPISGRSGFGKLG
Ga0210407_1033966213300020579SoilMHEDERDLLEALIFEEIEETVGTWLRAIIQRLEREQTAIRTDHREQRTPGGEKLKGTLLYQRRHPNSAKPAWPTALDRRQVLPISGRSGFGKLV
Ga0210407_1053603423300020579SoilMQEDERDLLEILIFDEIEETVGTWLRAIIQRLEKEQAAIRRDHRKQPTPSGETLRGTPLYQKQHPRCTKLTSPTALGRQRQVLPISGRSGFGKLA
Ga0210403_1016163123300020580SoilMQEDDLLEVLIFDEIEETVGTWLRAIIQRLEKEQAAIRRDHRKQPTPSGETLRGTPLYQKQHPRCTKLTSPTALGRQRQVLPISGRSGFGKLA
Ga0210403_1071230823300020580SoilVQKDYRDVLEVVKFDLIEETAGSLLRAIIRCLAEEQTAIRRDQQKQPTPSHETLRGTPLYQKHHPKSVKPDSSTALNRQRQVLSISGRSGLANPCEGSTP
Ga0210399_1010846643300020581SoilMQKDYRDVLEVVKFDLIEETVGSWLRAIIQRLEKEQTAIRRDQRERPILGRQTFRGTPLYQKRHPKCARPTSPKPASSRRTNSDM
Ga0210399_1055872723300020581SoilMQENERDVLEVLIFEEMEETVGTWLRAIIQRLEKEQTAIRRDQHKQPIPGRETLRGTLLYRKQHPKCAKLTSPTALDRRRQVLSISGRSGFGKLA
Ga0210395_1040496223300020582SoilMQKDERDHLEVLIFDEIEDRVGAWLRAIIQRLEKEQMAIRRDYHRQPTLIGETLRGALLYQKRHPKSAKPACPAAL
Ga0210406_10001309223300021168SoilVQEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKEQTANRRDYHKQPTPIGETLRGTLLYQQRHPKSAKPACPTALNRPRKVLPISGRSGFGKLV
Ga0210400_1055722923300021170SoilMQKDERDLLEVLIFDEIEDRVGAWLRAIIQRLEKEQMAIRRDYHRQPTLIGETLRGALLYQKRHPKSAKPACPAALDRPRKDLPISGQSGFGKLL
Ga0210396_1088064813300021180SoilMQKDYRDVLEVVKFDIIEETVGSWLRAIIRRLEVEHAAVRSDQQKQPTPRREATRGTPIRQRHHPKSAKPACSTTLNRQRQVLSISGRSGFSKPV
Ga0210393_1061601813300021401SoilMHEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDRRKQRTPSGEELKGTLLYQRHHPKSAKPAWPTALDRRQVLPISGRSGFGKLV
Ga0210389_1000745013300021404SoilMQKDERDHLEVLIFDEIEDRVGAWLRAIIQRLEKEQMAIRRDYHRQPTLIGETLRGALLYQKRHPKSAKPACPAALDRPRKDLPISGQSGFGKLL
Ga0210387_10000061273300021405SoilVQKDYRDVLEVVKFDLIEETAGSLLRAIIRCLAEAQTAIRRDQQKQPTPSHETLRGTPLYQEHHPKSVKADTSTALNRQRQVLSISGRSGFSKPV
Ga0210387_1011777543300021405SoilMHEDERDLLEALIFEEIEETVGTWLRAIIQRLEKEQTAIRRDRRKQRTPSGEELKGTLLYQRHHPKSAKPAWPTALDRRQVLPISGRSGFGKLV
Ga0210383_1035500223300021407SoilMHEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDRRKQRTPSGEELKGTLLYQRHHPKSAKPAWPTALDRRQVLPISGRSGFGILV
Ga0210394_10000086103300021420SoilMQKDERDLLEVLIFDEIEDTVGTWLRAIIQRLEKEQTAMRRDLHRQPTPIGKTLRGALLCQKRHSNSAKPACPAALDRPREVLPISGRSGFGKLV
Ga0187846_1037511923300021476BiofilmMSATRLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRNQQKQPTLGHETLRGTPLHQKRHPKSARPAGLTARRQVVPISGRSGFGKLA
Ga0210398_1027955223300021477SoilVQKDYRDVLEVVKFDLLEETVGSWLRAIIRRLEEEQRAIRRDQQKQPAPSHETLRRTLLYQRLHPESAKPACSTALDRRRQVLSISGRSSFSKLV
Ga0210402_1014214343300021478SoilMQEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRNHHKRPTPIGETLRGTLLYQKCRPKSAKPAHPTALDRREVLPISGRPGFGKPV
Ga0210402_1070356023300021478SoilMHEDERDLLEALIFEEIEETVGTWLRAIIQRLEREQTAIRTDHRERRTPGGEKLKGTLLYQRRHPNSAKPAWPTALDRRQVLPISGRSGFGKLV
Ga0242669_104366323300022528SoilCKMQKDERDLLEVLIFDEIEDRVGAWLRAIIQRLEKEQMAIRRDYHRQPTLIGETLRGALLYQKRHPKSAKPACPAALDRPRKDLPISGQSGFGKLL
Ga0242670_101793413300022708SoilKMQKDERDHLEVLIFDEIEDRVGAWLRAIIQRLEKEQMAIRRDYHRQPTLIGETLRGALLYQKRHPKSAKPACPAALDRPRKDLPISGQSGFGKLL
Ga0242677_100812223300022713SoilKMQKDERDLLEVLIFDEIEDRVGAWLRAIIQRLEKEQMAIRRDYHRQPTLIGETLRGALLYQKRHPKSAKPACPAALDRPRKDLPISGQSGFGKLL
Ga0242654_1040724113300022726SoilMHEDERDLLEVLIFDEIEETVGTWLRAIIQRLEREQTAIRTDHREQRTPGGEKLKGTLLYQRRHPNSAKPAWPTALDRRQVLPISGRSGFGKLV
Ga0207699_1080062413300025906Corn, Switchgrass And Miscanthus RhizosphereMQEDERYLLEVLIFDEIEETVGTWLRTIIQRLEKEQTAIRRDHCKQRTPGGGKLTGTLHYQRHHPKSAKPARPTALDRRQVLPISGRS
Ga0207684_1071455923300025910Corn, Switchgrass And Miscanthus RhizosphereMQEDERDLMEVLIFDEIEETVGTWLRTIIQRLEKEQTAIRRDHCKQRTPGGGKLTGTLHYQRHHPKSAKPARPTALDRRQVLPISGRSGVGKWESFND
Ga0207693_1001625753300025915Corn, Switchgrass And Miscanthus RhizosphereMHEDERDLLEALIFEEIEETVGTWLRAIIQRLEKEQTAIRRDHREQRTPGGEKLKGTLLYQRRHPNSAKSAWPTALDRRQVLPISGRSGFGKLV
Ga0209350_100009633300026277Grasslands SoilMQENERDLLEVLIFDEVEETVGIWLRAIIQRLEEEQTAIRRDYDKRPTSSGETLTAMPLSQKHHPKSPKPAGLTVLDRRRQVLPIWPIRFWSTRVKAPLQSLP
Ga0209268_101057713300026314SoilMQENERDLLEVLIFDEVEETVGIWLRAIIQRLEEEQTAIRRDYDKRPTSSGETLTAMPLSQKHHPKSPKPAGLTVLDRRRQVLPISGRSGFGQLG
Ga0209470_101995413300026324SoilLEVLIFDEVEETVGIWLRAIIQRLEEEQTAIRRDYDKRPTSSGETLTAMPLSQKHHTKSPKPAGLTVLDRRRQVLPISGRSGFGQLG
Ga0209807_101453043300026530SoilMQEDERDVLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDYDKRPTSSGETLTAMPLSQKHHPKSPKPAGLTVLDRRRQVLPISGRSGFGQLG
Ga0209648_1006678123300026551Grasslands SoilMQENERDLLEVLIFDEVEETVGIWLRAIIQRLEKEQTAIRRDYDKRPTSSGETLTAMPLSQKHHPKSPKPAGLTVLDRRRQVLPISGRSGFGQLG
Ga0209648_1017010833300026551Grasslands SoilMQEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDHHKRPTPIGETLRGTLLYQKRRPKSAKPACPTALDRREVLPISGRAGFGKLV
Ga0209648_1073627923300026551Grasslands SoilMQEDERDVLEVLIFDEIEETVGTWLRTIIQRLEREQTAIRREHRKQPTSNRQTLTAMPLYQQHHPKSAKPACLPVLDRRRQVLPISGRPG
Ga0209577_1016459923300026552SoilFAEVEETVGIWLRAIIQRLEKEPTAIRRDYDKRPTSSGETLPAMPLSQKHHPKSPKPAGLTVLDRRRQVLPISGRSGFGQLG
Ga0209004_107233323300027376Forest SoilMQEDGRDVLEVLIFDEIEETVGTWLCAVIQRLEKEQTAIRRDHHKQPTPGGETLREMSVYRKPHPKCEKSTLPPELDRRRQVVPISG
Ga0209735_100008323300027562Forest SoilVQKDYRDVLEVVKFDLIEETVGSWFRAIIRRLEEEQTAIRRDQQKQPAPSLETLRRTRLYQRHHPKSAKPACSTALDRRR
Ga0209735_100011393300027562Forest SoilDLLEVLKFDLIEETVGRWLRGIIQRLEKEQAAIRRDQQKQPTSSHETLRRTPLYQKHHPKSAKLACPTTLDRRRQVLPISG
Ga0209735_112429413300027562Forest SoilMQEDERDLLEVLIFDEIEETVGTWLRATIQRLEKEQAAIQRDHRKQPTPSGETLRGTPLYQKQHPKCTKLTSPTALGRRRQVLPISGRSGFGKLA
Ga0209733_100438123300027591Forest SoilMKQEERDVLEVLKFDLIEETLGSWLRAIIQRLEKEQTAIRRHQQKQGTPSHETLRGTPLYQKHHPKPAKLACLTALDRRRQVLPISGRSGFGKLA
Ga0209625_100160613300027635Forest SoilMQEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKEQAAIRRDHRKQPTPSGETLRGTPLYQKQHPKCTKLTSPTALGRRRQVLPISGRSGFGKLA
Ga0209180_1024922623300027846Vadose Zone SoilMQEDERDILEVLIFDEIEETVGTWLRTIIQRLEKEQTAIRRDHHKQPNPSGETLAGMLLYQKQHPKCAKPTFPTEVDRRRQVVPISGRSGFGKFV
Ga0209166_1013677023300027857Surface SoilMQEDECDLLEVLIFDEIEETVGTWLRAIIQRLEKEQAAIRRDHRKQPTPSAETLGGAPLYQKHHPKCTKLTSATALGRRRQVLPISGRSGFGKLA
Ga0209701_1028179923300027862Vadose Zone SoilMQEDGRDVLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRGHHKQPTPSGETLREMPFYQKQHPKCAKSTSPTELDRRRQVVPISGRSGFGKFV
Ga0209283_1042796723300027875Vadose Zone SoilMQEDERDILEVLIFDEIEETVGTWLRTIIQRLEKEQTVIRRDHHRQPNPSGQTLRGVLPYQKQHSKCAKSTSPTELDRRQVVPISGRSGFGKFV
Ga0209526_1066841013300028047Forest SoilMQKDERDLLEVLKFDLIEETVGSWLRGIIQRLEKEQAAIRRDQQKQPTSSHETLRRTPLYQKHHPKSAKLACPTTLDRRRQVLPISG
Ga0075388_1145781913300030848SoilMHEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDHRKQRTPGGEKLKGTLPYQRHHPKSAKPCPTALDRRQVLPIAGRSGFGKLV
Ga0170834_11132640623300031057Forest SoilMQEDERDRLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDCDRRPTSSGETLTAMPLYQKLHPKSAKPACVTVLDRRRQVLPISGRSGFGKLV
Ga0170834_11403187213300031057Forest SoilMQQDERDVLEVLIFDEIEETVGTWLRAIIQCLQKEKTAIRRDQLGRQTFRGTPFYQKRHPKCAKPASPTASDRRQVLPISARRGFGKLV
Ga0170822_1121214413300031122Forest SoilMQEDERDRLEVLIFDEIEETVGTRLRAIIQRLEKEQTAIRRDCDRRPTSSGETLTAMPLYQKRHPKSAKPACLTVLDRRRQVLPISGRSGFGKLV
Ga0170822_1574318113300031122Forest SoilMHEDERDRLEVLIFDEIEETVGTWLRTIIQRLEKAQTAIRRDHCKQRTPGGEKLKGTLPYQRHHPKSAKPACPTALDRRQVLPIAGRSGFGKLV
Ga0170823_1095809323300031128Forest SoilMQEVERGLLEVLIFDEIEETVGTWLRAIIQRLEKEQGSIRRDQQKQPTSGYQTLRGMPLYQKHHTKSARPACPTALDRRRQVLP
Ga0170823_1761085423300031128Forest SoilMHEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDHRKQRTPAGNKSKGTLLYQRHHPKSAKPCPTALDRRQVLPIAGRSGFGKLV
Ga0170824_11400988613300031231Forest SoilMHEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKAQKAIRRDHRKQRTPGGEKLKGTLPYQRHHPKSAKPACPTAL
Ga0170824_11809973313300031231Forest SoilMHEDERDLLEVLMFDEIEETVGTWLRAIIQRLEKEQTAIRRDRRKQRTPSGEELKGTLLYQRHHPKSAKPACPTALDQRQVLPISGRSGFDKLV
Ga0170824_12671183423300031231Forest SoilMHEDERDLLEVLIFDEIEESVGTWLRAIIQRLEKEHAAIRRDLRKQPTPSGETLRGTPLYQKQHPKCAKLTSPTASDRRRKVLPISGRSGFGKLA
Ga0170820_1210516023300031446Forest SoilMHEDEDECDLLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDHRKQRTPAGKKSKGTLLYQRHHPKSAKPAWPTALDRRQVLPISGRSGFGKLV
Ga0170819_1798841523300031469Forest SoilMHDDDRDLLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDRRKQRTPAGKKLKGTLLYQRHHPKSAKPACPTALDQRQVLPISGRSGFDKLV
Ga0170818_10294543523300031474Forest SoilMHEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDHRKQRTPAGKKSKGTLLYQRHHPKSAKPAWPTALDRRQVLPISGRSGFGKLV
Ga0307476_1009484623300031715Hardwood Forest SoilMQEDARDLMEVLIFDEIEKTVGAWLRTIIQRLEKEQTVTRRNYHKQPTPTSETVRRTPLHQKHHSKCAKSTCPTALDRRRQVVPISGRSGFGKFV
Ga0307469_1034257913300031720Hardwood Forest SoilVQEDERDLLEVLIFNEIEDTVGTWLRAIIQRLENEQAAIRRDCHKQPTPIGETLRGTLLYQKRHPKSAMPPCPPALNRR
Ga0307477_1039380823300031753Hardwood Forest SoilMQKDERDVLEVLKFDLIEETVGSWLRAIIRRLEKEQMATRRDQQKQPTPSRETLGGTPLYRKHHPKSAKPARSSALDRRRKVLPI
Ga0307477_1099415223300031753Hardwood Forest SoilMQEDERDVLEVLIFEEVEETVGTWLRAIIQRLEKEQTAIRRDHHKRPTPIGETLRGTLLYQKRRPKSAKPACPTALDRREVLPISGRPGFGKLV
Ga0307477_1113597413300031753Hardwood Forest SoilFESRVRCKMQEDDRDLLEVLIFDEIEETIGTWLRTIIQRLEKEQTATRRNYQKQSTPTSETMRRTLLHQKHHSKCAKPTCPTVLDRRRQVLPISGRPGFGQLA
Ga0307475_1001450243300031754Hardwood Forest SoilMQEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKEQGSIRRDQQKQPTSGYQTLRGMPLYQKHHTKSAKSACPTALNRRRQVLVRFELLTRGQRRMLLPLPR
Ga0307475_1002218923300031754Hardwood Forest SoilMQEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKEQTAIRRDHHKRPTPIGETLRGTLLYQKRRPKSAKPACPTALDRREVLPISGRPGFGKLV
Ga0310913_1104811813300031945SoilMHEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKERTAIRRDHRKQRTPGGEKLKGTLLYQRHHPKSAKPACPTALD
Ga0307479_1001890323300031962Hardwood Forest SoilMQEDERDVLEVLIFEEMEETVGTWLRAIIQRLEKEQTAIRRDQHKQPIPGRETLRGTLLYRKQHPKCTKLTSPTALDRRRQVLSISGRSGFGKLA
Ga0307479_1002934323300031962Hardwood Forest SoilMQEDDRDLLEVLIFDEIEETIGTWLRTIIQRLEKEQTASRRNYHKQSTPTSETVRRTLLHQKHHSKCAKPTCPTVLDRRRQVLPISGRPGFGQLA
Ga0307479_1008201123300031962Hardwood Forest SoilMQEDERDVLEVLIFDEVEETVGTWLRAIIQRLEKEQTAIRGDYDKRPTSSGETLTAMPLSQKHYPKSPKPAGLTVLDRRRQVLPISARSGFGKRE
Ga0307470_1028007233300032174Hardwood Forest SoilMQKDYRDVLEVAKFDLIEETVGSWLRAIIQRLEKDQAAIRRDQQKQPTTSHETFRGTPLYQKHHPKSAKLACPTTLDRRRQVLPISG
Ga0307471_10019019333300032180Hardwood Forest SoilMHEDERDLLEALIFEEIEETVGTWLRAIIQRLEKEQTAIRRDHRVQRTPGGEKLKGTLLYQRRHPNSAKPAWPTASDRRQVLPISGRSDFGKLV
Ga0307471_10225618813300032180Hardwood Forest SoilMQANERDVLEVLIFEEMEETVGTWLRAIIQRLEKEQTAIRRDQHKQPIPGRETLRGTLLYRKQHPKCAKLTSPTALDRRRQVLSISGRSGFGKLA
Ga0307471_10256902523300032180Hardwood Forest SoilMQEDERDLMEVLIFDEIEETVGTWLRAIIRRLEKEQAAIRRDHSKQPTLSGETLRGTPLYQKQHPKCAKLTSPTALDRRRQVLPSSSRSGFGKLE
Ga0307471_10259946323300032180Hardwood Forest SoilVQEDERDLLEVLIFDEIEETVGTWLRAIIQRLEKEQTANRRDYHKQPTPMGETLRGTLLYQQRHPKSAKPACPTALNRP
Ga0306920_10176671213300032261SoilMQDDERDLLEVLIFDEIEETVGTWLRTIIRRLEKEQRAIPRDQQKQPASGYETLRGTPLNQKRHPKTGDPCRRRPSAPAFPGHQDPCRQ

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.