NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F066086

Metagenome / Metatranscriptome Family F066086

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F066086
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 40 residues
Representative Sequence ARGQRSMYLTSPAGFTVVVTGNATWAELRELAASLRPVAA
Number of Associated Samples 114
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.59 %
% of genes near scaffold ends (potentially truncated) 95.28 %
% of genes from short scaffolds (< 2000 bps) 87.40 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.850 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(21.260 % of family members)
Environment Ontology (ENVO) Unclassified
(18.110 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.669 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 14.71%    β-sheet: 17.65%    Coil/Unstructured: 67.65%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF03631Virul_fac_BrkB 62.20
PF02601Exonuc_VII_L 9.45
PF02609Exonuc_VII_S 4.72
PF13742tRNA_anti_2 2.36
PF13540RCC1_2 1.57
PF03320FBPase_glpX 0.79
PF06071YchF-GTPase_C 0.79
PF12697Abhydrolase_6 0.79
PF13655RVT_N 0.79
PF02401LYTB 0.79
PF07592DDE_Tnp_ISAZ013 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 62.20
COG1570Exonuclease VII, large subunitReplication, recombination and repair [L] 9.45
COG1722Exonuclease VII small subunitReplication, recombination and repair [L] 4.72
COG07614-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspHLipid transport and metabolism [I] 1.57
COG0012Ribosome-binding ATPase YchF, GTP1/OBG familyTranslation, ribosomal structure and biogenesis [J] 0.79
COG1494Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related proteinCarbohydrate transport and metabolism [G] 0.79


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.85 %
UnclassifiedrootN/A3.15 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2189573001|GZR05M102J06U3Not Available519Open in IMG/M
3300001356|JGI12269J14319_10091647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1542Open in IMG/M
3300005435|Ga0070714_102065499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia555Open in IMG/M
3300005435|Ga0070714_102235243All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia532Open in IMG/M
3300005437|Ga0070710_10070543All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2013Open in IMG/M
3300005548|Ga0070665_101205948All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia767Open in IMG/M
3300005569|Ga0066705_10845669All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia544Open in IMG/M
3300005576|Ga0066708_10859080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia567Open in IMG/M
3300006059|Ga0075017_101544070All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii523Open in IMG/M
3300006102|Ga0075015_100616488All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii636Open in IMG/M
3300006162|Ga0075030_100413502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1075Open in IMG/M
3300006173|Ga0070716_100014970All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales3979Open in IMG/M
3300006755|Ga0079222_11864416All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300006800|Ga0066660_10741506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia802Open in IMG/M
3300006806|Ga0079220_10280310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1017Open in IMG/M
3300009523|Ga0116221_1426125All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia578Open in IMG/M
3300009524|Ga0116225_1034150All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2508Open in IMG/M
3300009524|Ga0116225_1434308All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii583Open in IMG/M
3300009551|Ga0105238_10271516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1676Open in IMG/M
3300009839|Ga0116223_10069116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2268Open in IMG/M
3300010339|Ga0074046_10392165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii839Open in IMG/M
3300010341|Ga0074045_10476378All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium804Open in IMG/M
3300010373|Ga0134128_10666645All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1156Open in IMG/M
3300010373|Ga0134128_12052322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia630Open in IMG/M
3300010398|Ga0126383_10679746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1106Open in IMG/M
3300010876|Ga0126361_10741737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1657Open in IMG/M
3300011119|Ga0105246_10203614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1540Open in IMG/M
3300012201|Ga0137365_10108460All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2088Open in IMG/M
3300012210|Ga0137378_10158042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2102Open in IMG/M
3300012357|Ga0137384_10059785All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3159Open in IMG/M
3300012362|Ga0137361_11368475All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium631Open in IMG/M
3300012923|Ga0137359_11429095All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia580Open in IMG/M
3300012987|Ga0164307_10640129All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium825Open in IMG/M
3300013307|Ga0157372_12252766All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium626Open in IMG/M
3300013307|Ga0157372_13009866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium539Open in IMG/M
3300014969|Ga0157376_11641198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium677Open in IMG/M
3300016294|Ga0182041_10383155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1191Open in IMG/M
3300016341|Ga0182035_11147242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia693Open in IMG/M
3300017926|Ga0187807_1189478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia665Open in IMG/M
3300017959|Ga0187779_10349261All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae955Open in IMG/M
3300017972|Ga0187781_11037167All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales600Open in IMG/M
3300017973|Ga0187780_10867186All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia655Open in IMG/M
3300017973|Ga0187780_11479368All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300018085|Ga0187772_10220082All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1281Open in IMG/M
3300018085|Ga0187772_10370952All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium992Open in IMG/M
3300018085|Ga0187772_11235634All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium551Open in IMG/M
3300018468|Ga0066662_10102477All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2031Open in IMG/M
3300018482|Ga0066669_10236854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1431Open in IMG/M
3300021178|Ga0210408_10064205All Organisms → cellular organisms → Bacteria2869Open in IMG/M
3300021181|Ga0210388_10351687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1296Open in IMG/M
3300021374|Ga0213881_10001700All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia10135Open in IMG/M
3300021403|Ga0210397_10395740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1032Open in IMG/M
3300021404|Ga0210389_10240737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1414Open in IMG/M
3300021404|Ga0210389_10883220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia696Open in IMG/M
3300021406|Ga0210386_10538113Not Available1010Open in IMG/M
3300021432|Ga0210384_10355813All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1318Open in IMG/M
3300021432|Ga0210384_10504828All Organisms → cellular organisms → Bacteria1088Open in IMG/M
3300025906|Ga0207699_10509713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium869Open in IMG/M
3300025915|Ga0207693_11042992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium623Open in IMG/M
3300025928|Ga0207700_11427854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium615Open in IMG/M
3300025929|Ga0207664_10458548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1138Open in IMG/M
3300025960|Ga0207651_11987412All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium523Open in IMG/M
3300025972|Ga0207668_10210226All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1556Open in IMG/M
3300026023|Ga0207677_11996797All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium539Open in IMG/M
3300027029|Ga0208731_1002693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1569Open in IMG/M
3300027166|Ga0208729_112678All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia523Open in IMG/M
3300027662|Ga0208565_1127291All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium753Open in IMG/M
3300027765|Ga0209073_10235439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii707Open in IMG/M
3300027825|Ga0209039_10023272All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3109Open in IMG/M
3300027867|Ga0209167_10119155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1365Open in IMG/M
3300027879|Ga0209169_10169742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1138Open in IMG/M
3300027911|Ga0209698_10520392All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium920Open in IMG/M
3300028381|Ga0268264_10365721All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1377Open in IMG/M
3300028759|Ga0302224_10141153All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium941Open in IMG/M
3300028789|Ga0302232_10615908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia533Open in IMG/M
3300028791|Ga0307290_10052940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1464Open in IMG/M
3300028795|Ga0302227_10329837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia580Open in IMG/M
3300028801|Ga0302226_10287668All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia693Open in IMG/M
3300028824|Ga0307310_10672875All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia530Open in IMG/M
3300028877|Ga0302235_10505934All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia513Open in IMG/M
3300028906|Ga0308309_10417414All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1152Open in IMG/M
3300029943|Ga0311340_10503431All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1082Open in IMG/M
3300029951|Ga0311371_10468268All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1678Open in IMG/M
3300029999|Ga0311339_10310909All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1689Open in IMG/M
3300029999|Ga0311339_10765719All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium934Open in IMG/M
3300030053|Ga0302177_10094366All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1739Open in IMG/M
3300030056|Ga0302181_10056452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2045Open in IMG/M
3300030058|Ga0302179_10281539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium733Open in IMG/M
3300030524|Ga0311357_11361117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia606Open in IMG/M
3300030580|Ga0311355_10352799All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1456Open in IMG/M
3300030618|Ga0311354_10399874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1386Open in IMG/M
3300030739|Ga0302311_10840309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia593Open in IMG/M
3300031236|Ga0302324_102108868All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia703Open in IMG/M
3300031525|Ga0302326_11047154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1140Open in IMG/M
3300031525|Ga0302326_13542864All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia518Open in IMG/M
3300031543|Ga0318516_10097996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1655Open in IMG/M
3300031546|Ga0318538_10407798All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium735Open in IMG/M
3300031546|Ga0318538_10530654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales638Open in IMG/M
3300031668|Ga0318542_10627320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii561Open in IMG/M
3300031679|Ga0318561_10619843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales596Open in IMG/M
3300031723|Ga0318493_10887317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia504Open in IMG/M
3300031736|Ga0318501_10404998All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium737Open in IMG/M
3300031764|Ga0318535_10258908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium779Open in IMG/M
3300031779|Ga0318566_10648444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia513Open in IMG/M
3300031792|Ga0318529_10134585All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1131Open in IMG/M
3300031797|Ga0318550_10273589All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium819Open in IMG/M
3300031890|Ga0306925_10125286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2751Open in IMG/M
3300031896|Ga0318551_10835328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii536Open in IMG/M
3300031897|Ga0318520_10724300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium622Open in IMG/M
3300031939|Ga0308174_10313134All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1241Open in IMG/M
3300031959|Ga0318530_10354653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales608Open in IMG/M
3300031962|Ga0307479_11526281All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium625Open in IMG/M
3300032001|Ga0306922_11396142All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales704Open in IMG/M
3300032039|Ga0318559_10216512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium882Open in IMG/M
3300032055|Ga0318575_10322897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium781Open in IMG/M
3300032063|Ga0318504_10148520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1078Open in IMG/M
3300032066|Ga0318514_10207733All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1026Open in IMG/M
3300032094|Ga0318540_10548245All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium558Open in IMG/M
3300032770|Ga0335085_10738349All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1090Open in IMG/M
3300032782|Ga0335082_11362497All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium579Open in IMG/M
3300032783|Ga0335079_10188028All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2297Open in IMG/M
3300032783|Ga0335079_12100547All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia542Open in IMG/M
3300032892|Ga0335081_10425066Not Available1699Open in IMG/M
3300032893|Ga0335069_10830832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1038Open in IMG/M
3300032895|Ga0335074_10023765All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia8651Open in IMG/M
3300034199|Ga0370514_053599All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1014Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil21.26%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa14.96%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil5.51%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil5.51%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.51%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.15%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.36%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.36%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil2.36%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.36%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.57%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.57%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.57%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.57%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.57%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.57%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.79%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.79%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.79%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.79%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.79%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.79%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.79%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.79%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2189573001Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)EnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300017926Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027029Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)EnvironmentalOpen in IMG/M
3300027166Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF033 (SPAdes)EnvironmentalOpen in IMG/M
3300027662Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028789Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028795Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1EnvironmentalOpen in IMG/M
3300028801Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028877Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030056Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030058Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300034199Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FD2_024362602189573001Grass SoilRGQRSLYLTSPAGFTVVVTGNATWPELRQLAASLRPV
JGI12269J14319_1009164733300001356Peatlands SoilRGQRSMYVTSPAGFTVVVTGNATWAQLRELAASLRPVAG*
Ga0070714_10206549913300005435Agricultural SoilSATPARGQRSMYRTSPAGVTLVVTGNATWPELRQLAASLSPA*
Ga0070714_10223524323300005435Agricultural SoilSATPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPV*
Ga0070710_1007054313300005437Corn, Switchgrass And Miscanthus RhizosphereLSATPARGQRSMYVTSPAGFTIVVTGNASWAELRQLAASLRRVTAGI*
Ga0070665_10120594813300005548Switchgrass RhizosphereQRSMYRTSPAGFTLVVTGNATWPELRQLAASLRPA*
Ga0066705_1084566923300005569SoilAVSPAGFTVVVTGNAAWADLRLLAASLRPIAAGG*
Ga0066708_1085908023300005576SoilRSMYRTSPAGFTLVVTGNATWSELRQLAASLRPI*
Ga0075017_10154407013300006059WatershedsGQRSMYVTSPAGFTVVVTGNATWAQLRELVASLRPVAG*
Ga0075015_10061648823300006102WatershedsTPARGQRSMYVTSPAGFTVVVTGNATWAELRELAASLHPVAG*
Ga0075030_10041350223300006162WatershedsATPSRGQRSMYVTSPDGFTLVVTGNATWAQLRELAASLRPVAG*
Ga0070716_10001497013300006173Corn, Switchgrass And Miscanthus RhizosphereRGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA*
Ga0079222_1186441613300006755Agricultural SoilTPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA*
Ga0066660_1074150613300006800SoilLSTTPARGQRSMYRTSPAGFTLVVTGNASWSELRQLAASLRPA*
Ga0079220_1028031023300006806Agricultural SoilARGQRSMYRTSPAGFTLVVTGNATWLELRQLAASLHPA*
Ga0116221_142612523300009523Peatlands SoilMYVTSPAGFTVVVTGNATWAELRELAASLRPVAG*
Ga0116225_103415043300009524Peatlands SoilMYVTSPAGFTVVVTGNATWAELRELAASLRPVAAGA*
Ga0116225_143430823300009524Peatlands SoilARGQRSMYVTSPAGFTVVVTGNATWAELRELAASLRPVAG*
Ga0105238_1027151633300009551Corn RhizosphereARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA*
Ga0116223_1006911613300009839Peatlands SoilTPSRGQRSMYVTSPAGFTVVVTGNATWAELRELAASLRPVAG*
Ga0074046_1039216513300010339Bog Forest SoilGQRSMYVTGPAGFTVVVTGNGTWAELRELAASLRPVAG*
Ga0074045_1047637823300010341Bog Forest SoilMYVTSPAGFTVVVTGNATWAQLRELVASLRAVAG*
Ga0134128_1066664513300010373Terrestrial SoilTPARGQRSMYRTSPAGFTLVITGNATWPELRQLAASLRPL*
Ga0134128_1205232223300010373Terrestrial SoilMYVVSPAGFTVVVTGSATWADLRLLAASLRPATAGG*
Ga0126383_1067974613300010398Tropical Forest SoilQRSMYVTSPAGFTVVVTGNASWAELRVLAASLRPVAAGV*
Ga0126361_1074173743300010876Boreal Forest SoilSMYYTSATGRTVVVTGNASWAQLRQLAASLRPVGG*
Ga0105246_1020361413300011119Miscanthus RhizosphereQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPV*
Ga0137365_1010846013300012201Vadose Zone SoilARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLRPA*
Ga0137378_1015804213300012210Vadose Zone SoilARGQRSMYVTSPAGFTVVVTGNATWAELRELAASLREVAG*
Ga0137384_1005978513300012357Vadose Zone SoilARSQRSMYRTSLAGFTLVVTGNVTWAELRQLAASLRPI*
Ga0137361_1136847513300012362Vadose Zone SoilGQRSMYVTSQAGFTVVVTGNATWAELRELAASLREVAG*
Ga0137359_1142909513300012923Vadose Zone SoilMYVTSQAGFTVVVTGNATWAELRELAASLREVAG*
Ga0164307_1064012923300012987SoilNLSATPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA*
Ga0157372_1225276613300013307Corn RhizosphereLSATPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLYPA*
Ga0157372_1300986613300013307Corn RhizospherePARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA*
Ga0157376_1164119813300014969Miscanthus RhizosphereQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA*
Ga0182041_1038315523300016294SoilRGQRSMYLTSPAGFTVVVTGNAGWAELRQLAASLRPVAARP
Ga0182035_1114724223300016341SoilARGQRSMYVTSPAGFTLVVTGNATWAELRELAASLRPVPGGG
Ga0187807_118947813300017926Freshwater SedimentPSRGQRSMYFTSPTGFTVVITGNATWAELRELAASLRTLSS
Ga0187779_1034926113300017959Tropical PeatlandTTPARGQRSMYVTSPAGFTVVVTGNATWAELRELAASLRPVPART
Ga0187781_1103716713300017972Tropical PeatlandQRSMYFTSPAGFTVVITGNATWAELRELAASLRPVSS
Ga0187780_1086718623300017973Tropical PeatlandSTPARDQRSMYLTSPAGFTVVVTGNATWAQLRELAAALRPVAR
Ga0187780_1147936823300017973Tropical PeatlandVSATPSRGQRSMYFTSPAGFTVVITGNATWAELRELAASLRTVSSRARAG
Ga0187772_1022008223300018085Tropical PeatlandSMYFTSPAGFTVVITGNATWAELRELAASLRTLSS
Ga0187772_1037095213300018085Tropical PeatlandQRSMYLTSPAGFTLVVTGNATWAQLRELAASLRPVARRARRTG
Ga0187772_1123563423300018085Tropical PeatlandSMYFTSPAGFTVVITGNATWVELRELAASLRTVSSRARAG
Ga0066662_1010247743300018468Grasslands SoilFSTAPARGQRSLSATSPAGFSVVVTGNATWADLRLLAASLRRVTAGG
Ga0066669_1023685413300018482Grasslands SoilTPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPARTPPAHRLLHPA
Ga0210408_1006420533300021178SoilTPARGQRSLYLTSPAGFTVVVTGNATWPELRQLAASLRPVS
Ga0210388_1035168723300021181SoilGQRSLYFTGAAGLVVVVTGNATWAQLRQLAASLHPADASLRPLAG
Ga0213881_10001700133300021374Exposed RockQRSVYFTSPAGFTVVVTGNATWAQLRQLAASLRPVGR
Ga0210397_1039574013300021403SoilARGQRSMYLTSPAGFTVVVTGNATWAELRELAASLRPVAA
Ga0210389_1024073733300021404SoilGQRSMYLTSAAGFTVVVTGNASWAELRELAAALRPVAR
Ga0210389_1088322023300021404SoilTNTPSRGQRSLYFTGAAGLVVVVTGNATWAQLRQLAASLHPVAG
Ga0210386_1053811313300021406SoilRGQRSLAVTSPAGVTLVVTGNASWAQLRTLAASLRTEG
Ga0210384_1035581323300021432SoilGQRSLYLTSPAGFTVVVTGNATWPELRQLAASLRPV
Ga0210384_1050482813300021432SoilGQRSLYLTSPAGFTVVVTGNATWPELRQLAASLRPVS
Ga0207699_1050971313300025906Corn, Switchgrass And Miscanthus RhizospherePARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA
Ga0207693_1104299223300025915Corn, Switchgrass And Miscanthus RhizosphereLSATPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA
Ga0207700_1142785413300025928Corn, Switchgrass And Miscanthus RhizosphereRGQRSMYVTSPAGFTIVVTGNASWAELRQLAASLRRVTAGI
Ga0207664_1045854823300025929Agricultural SoilARGQRSMYAVSPAGFTVVVTGSASWADLRLLAASLRPVVAGG
Ga0207651_1198741223300025960Switchgrass RhizosphereNLSATPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA
Ga0207668_1021022633300025972Switchgrass RhizosphereRGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA
Ga0207677_1199679723300026023Miscanthus RhizosphereNLSATPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLRPA
Ga0208731_100269333300027029Forest SoilSQRSMYLTSAAGFTVVVTGNASWAELRELAAVLCPVAR
Ga0208729_11267813300027166Forest SoilQRSMYYTSSAGRTVVVTGNATWAQLSELAASLHPVTT
Ga0208565_112729113300027662Peatlands SoilSMYVTSPAGFTVVVTGNATWAELRELAASLRPVAG
Ga0209073_1023543923300027765Agricultural SoilYVVSPAGFTVVVTGSATWADLRLLAASLRPVSPER
Ga0209039_1002327213300027825Bog Forest SoilWGQRSMYVTGPAGFTVVVTGNGTWAELRELAASLRPVAG
Ga0209167_1011915513300027867Surface SoilLTAAPDRGQRSMYLTSAAGVTLVVTGNATWAQLRRLAASLRPVAR
Ga0209169_1016974223300027879SoilRSLYYTSATGRTLVVTGNASWAQLRELAASLHPVTA
Ga0209698_1052039213300027911WatershedsLSATPSRGQRSMYVTSPDGFTLVVTGNATWAQLRELAASLRPVAG
Ga0268264_1036572113300028381Switchgrass RhizosphereARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA
Ga0302224_1014115313300028759PalsaNRPVVARGQRSMYLTSPAGFTLVVTGNATWAQRRELAAALYPVAR
Ga0302232_1061590823300028789PalsaYLNSAPSRGQRSMYYTSATGRTVVVTGNATWAQLRELAASLHPVTA
Ga0307290_1005294023300028791SoilLSATPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPSDRARSDQSDKRDK
Ga0302227_1032983723300028795PalsaTPSRGQRSMYYTSATGRTVVVTGNATWAQLRELAASLHPVTA
Ga0302226_1028766823300028801PalsaLSRGQRSMYYTSTTGVTVVVTGNATWAQLRELAASLHPVTT
Ga0307310_1067287513300028824SoilNLSATSARGQRSMYRTSPAGFTLVVTGNASWAELRQLAASLRSV
Ga0302235_1050593413300028877PalsaSLFYTSPAGFTLVVSGNASWNELRELAASLRPAAA
Ga0308309_1041741423300028906SoilSMYLTSAAGFTLVVTGNASWAELRELAAALRPVAR
Ga0311340_1050343113300029943PalsaSSTPSLGQRSMYYTSSAGRTVVVTGNATWAQLRELAASLHPVTA
Ga0311371_1046826813300029951PalsaSMYYTSTTGVTVVVTGNATWAQLRELAASLHPVTT
Ga0311339_1031090913300029999PalsaSRGQRSMYYTSATGRTVVVTGNATWAQLRELAASLHPATA
Ga0311339_1076571913300029999PalsaLSATPSRGQRSLFYTSPAGFTLVVSGNATWDELRELAASLRPAAA
Ga0302177_1009436633300030053PalsaSAPSRGQRSMYYTSSAGRTVVVTGNATWAQLSELAASLHPVTT
Ga0302181_1005645213300030056PalsaRGQRSMYYTSSAGRTVVVTGNATWAQLSELAASLHPVTT
Ga0302179_1028153913300030058PalsaSATPSRGQRSLFYTSPAGFTLVVSGNATWDELRELAASLRPAAA
Ga0311357_1136111713300030524PalsaWHLNSAPSRGQRSMYYTSATGRTIVVTGSATWTQLGELAASLHPVTG
Ga0311355_1035279933300030580PalsaGQRSMYYTSATGRTVVVTGNATWAQLRELAASLHPVTA
Ga0311354_1039987413300030618PalsaNSAPSRGQRSMYYTSTTGVTVVVTGNATWAQLRELAASLHPVTT
Ga0302311_1084030913300030739PalsaLSATPSRGQRSLFYTSPAGFTLVVSGNATWDELRELAASLRPTAA
Ga0302324_10210886823300031236PalsaMYFTSAAGRFTVVVTGNATWTQLRELAASLHPAAG
Ga0302326_1104715423300031525PalsaWHLNSAPSRGQRSMYYTSSAGRTVVVTGNATWAQLSELAASLHPVTT
Ga0302326_1354286413300031525PalsaLDPAPSRGQRSLSYTSPAGFTLVVTGTATWAQLRQLAASLRPAR
Ga0318516_1009799643300031543SoilSMYLASPAGFTLVVTGDATWAELRELAASLRPVAR
Ga0318538_1040779823300031546SoilPARGQRSMYLTSPAGFTVVVTGNAGWAELRQLAASLRPVAARP
Ga0318538_1053065413300031546SoilSVSATPSRNQRSMYFASPAGFTVVVTGNATWAELRELAASLRPLSS
Ga0318542_1062732013300031668SoilSMYLTSPAGFTVVVTGNAGWAELRRLAASLRPVAARP
Ga0318561_1061984313300031679SoilVSATPSRHQRSMYFASPAGFTVVVTGNATWAELRELAAWLRPLSS
Ga0318493_1088731723300031723SoilLTVTPARGQRSMYLTSPAGFTVVVTGNAGWAELRQLAASLRPIAARP
Ga0318501_1040499823300031736SoilTPARGQRSMYLTSPAGFTVVVTGNAGWAELRQLAASLRPVAGGV
Ga0318535_1025890813300031764SoilMYLTSPAGFTVVVTGNAGWAELRQLVASLRPVAARP
Ga0318566_1064844423300031779SoilREPGPAGFTVVVTGNATWTEQRELAASLRPVAAGG
Ga0318529_1013458523300031792SoilMYLTSPAGFTVVVTGNAEWAELRQLAASLRPVAARP
Ga0318550_1027358913300031797SoilTPARGQRSMYLTSPAGFTVVVTGNAEWAELRQLAASLRPVAARP
Ga0306925_1012528613300031890SoilWSVSATPSRNQRSMYFASPAGFTVVVTGNATWAELRELAASLRPLSS
Ga0318551_1083532823300031896SoilLSATPARGQRSMYLTSPAGFTVVVTGNAGWAELRQLVASLRPVAARP
Ga0318520_1072430023300031897SoilMYRVSPAGFTVVITGNATWAELRQLAASLRPVAGGG
Ga0308174_1031313413300031939SoilATPARGQRSMYVISPAGFTVVVTGSATWADLRLLAASLRPVAARG
Ga0318530_1035465313300031959SoilSVSATPSRNQRSMYFASPAGFTVVVTGDATWAELRELAASLRPLSS
Ga0307479_1152628113300031962Hardwood Forest SoilTMYVTSPAGFTVVVTGNASWAELRELAASLRPVAAGA
Ga0306922_1139614213300032001SoilSVSATPSRHQRSMYFASPAGFTVVVTGNATWAELRELAASLRPLSS
Ga0318559_1021651213300032039SoilSMYLTSPAGFTVVVTGNAEWAELRQLAASLRPVAARP
Ga0318575_1032289723300032055SoilRSMYLTSPAGFTVVVTGNAGWAELRRLAASLRPVAARP
Ga0318504_1014852023300032063SoilATPARGQRSMYLTSPAGFTVVVTGNAGWAELRQLAASLRPVAGGV
Ga0318514_1020773313300032066SoilARGQRSMYLASPAGFTLVVTGDATWAELRELAASLRPVAR
Ga0318540_1054824513300032094SoilVNPARGQRSMYLTSPAGFTVVVTGNAGWAELRQLAASLRPVAGGV
Ga0311301_1132446933300032160Peatlands SoilDQRSLYETDPAGATIVITGNASWAQLRVLAASLRPVTPEG
Ga0335085_1073834923300032770SoilPARGQRSMYLTSPAGFTLVVTGNAGWAELRQLATSLRPVAARP
Ga0335082_1136249713300032782SoilGQRSMYLTSPAGFTVVVTGNAGWAELRQLAASLRPVAARP
Ga0335079_1018802813300032783SoilGQRSMYRTSPAGFTLVVTGNATWAELRQLAASLRPV
Ga0335079_1210054723300032783SoilTPARGQRSMYVTSPAGFTVVVTGNATWAELRELAASLRPVPGGG
Ga0335081_1042506633300032892SoilNVGRAQRSLYRTERDGGTLIVTGNATWAQLRVLAASLRVQPRS
Ga0335069_1083083213300032893SoilARGQRSMYRTSPAGYTVVVTGTAGWAELRQLAASLRPIAARS
Ga0335074_1002376513300032895SoilTPSRGQRSMYLAGAGFTIVVTGNATWAELRQLAASLRPLSR
Ga0370514_053599_881_10123300034199Untreated Peat SoilSTPSRGQRSMYYTSPAGCTVVVTGNATWAQLRQLAASLHPVTG


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