NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F066113

Metagenome / Metatranscriptome Family F066113

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F066113
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 66 residues
Representative Sequence MAPEFPIRIITDDGECEVIDSPEELMGRVDSLDSTDPGGRVWVRDAYDRTVRLRMRGGIVDVLEC
Number of Associated Samples 102
Number of Associated Scaffolds 126

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 59.84 %
% of genes near scaffold ends (potentially truncated) 18.11 %
% of genes from short scaffolds (< 2000 bps) 73.23 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (77.953 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(18.898 % of family members)
Environment Ontology (ENVO) Unclassified
(31.496 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(36.220 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 7.53%    β-sheet: 30.11%    Coil/Unstructured: 62.37%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.45.2.2: PilZ domain-associated domaind3kyga13kyg0.54684
b.47.1.0: automated matchesd3h7ta_3h7t0.53479
b.7.1.2: Synaptotagmin-like (S variant)d2bwqa_2bwq0.53116
b.47.1.0: automated matchesd2asub_2asu0.53042
b.30.2.1: Amine oxidase catalytic domaind1oaca11oac0.52961

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 126 Family Scaffolds
PF01709Transcrip_reg 55.56
PF13421Band_7_1 9.52
PF10459Peptidase_S46 8.73
PF07690MFS_1 3.97
PF14237GYF_2 2.38
PF00378ECH_1 1.59
PF02604PhdYeFM_antitox 0.79
PF13432TPR_16 0.79
PF027373HCDH_N 0.79
PF13493DUF4118 0.79
PF01593Amino_oxidase 0.79
PF00535Glycos_transf_2 0.79
PF13785DUF4178 0.79
PF03992ABM 0.79
PF03160Calx-beta 0.79
PF00154RecA 0.79
PF02675AdoMet_dc 0.79
PF01022HTH_5 0.79
PF00291PALP 0.79
PF00308Bac_DnaA 0.79
PF00561Abhydrolase_1 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 126 Family Scaffolds
COG0217Transcriptional and/or translational regulatory protein YebC/TACO1Translation, ribosomal structure and biogenesis [J] 55.56
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.79
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 0.79
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 0.79
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 0.79
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.79
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.79
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 0.79
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 0.79
COG1586S-adenosylmethionine decarboxylaseAmino acid transport and metabolism [E] 0.79
COG1748Saccharopine dehydrogenase, NADP-dependentAmino acid transport and metabolism [E] 0.79
COG20843-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenaseLipid transport and metabolism [I] 0.79
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.79
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.79

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.95 %
UnclassifiedrootN/A22.05 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_102916495Not Available636Open in IMG/M
3300000956|JGI10216J12902_117752009Not Available764Open in IMG/M
3300001372|YBBDRAFT_1164214Not Available1084Open in IMG/M
3300002896|JGI24802J43972_1001551All Organisms → cellular organisms → Bacteria1456Open in IMG/M
3300003313|P32013IDBA_1042048All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300003319|soilL2_10113151All Organisms → cellular organisms → Bacteria3559Open in IMG/M
3300003366|JGI25321J50212_10062067All Organisms → cellular organisms → Bacteria1043Open in IMG/M
3300004156|Ga0062589_102263007All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300004463|Ga0063356_105373085Not Available550Open in IMG/M
3300004479|Ga0062595_100457659All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300005293|Ga0065715_10611532All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium701Open in IMG/M
3300005340|Ga0070689_100326336All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300005340|Ga0070689_101971472All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300005343|Ga0070687_100208838All Organisms → cellular organisms → Bacteria → Proteobacteria1188Open in IMG/M
3300005353|Ga0070669_101500944All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300005356|Ga0070674_101469681All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300005441|Ga0070700_101859413All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300005549|Ga0070704_100341644All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300005615|Ga0070702_100134785Not Available1565Open in IMG/M
3300005836|Ga0074470_11815752All Organisms → cellular organisms → Bacteria → Acidobacteria7515Open in IMG/M
3300005905|Ga0075269_10035889All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300006169|Ga0082029_1693110All Organisms → cellular organisms → Bacteria115202Open in IMG/M
3300006169|Ga0082029_1693110All Organisms → cellular organisms → Bacteria115202Open in IMG/M
3300006196|Ga0075422_10015713All Organisms → cellular organisms → Bacteria2523Open in IMG/M
3300006755|Ga0079222_10265686All Organisms → cellular organisms → Bacteria1091Open in IMG/M
3300006755|Ga0079222_10970486All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300006806|Ga0079220_11446940All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300006844|Ga0075428_100081534All Organisms → cellular organisms → Bacteria3531Open in IMG/M
3300006844|Ga0075428_100463899All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1356Open in IMG/M
3300006845|Ga0075421_100000002All Organisms → cellular organisms → Bacteria164871Open in IMG/M
3300006845|Ga0075421_100268547All Organisms → cellular organisms → Bacteria → Proteobacteria2085Open in IMG/M
3300006854|Ga0075425_100005491All Organisms → cellular organisms → Bacteria13184Open in IMG/M
3300006880|Ga0075429_100671555All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300006894|Ga0079215_11104263Not Available594Open in IMG/M
3300006894|Ga0079215_11377992All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria549Open in IMG/M
3300006918|Ga0079216_10656268All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria736Open in IMG/M
3300006918|Ga0079216_11981403All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300006969|Ga0075419_10272132All Organisms → cellular organisms → Bacteria1136Open in IMG/M
3300006969|Ga0075419_10921849Not Available631Open in IMG/M
3300007004|Ga0079218_10345730All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1235Open in IMG/M
3300007004|Ga0079218_11555105All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300007004|Ga0079218_12149382All Organisms → cellular organisms → Bacteria → Acidobacteria646Open in IMG/M
3300007004|Ga0079218_13622405All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300009100|Ga0075418_12272812All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300009147|Ga0114129_11669023All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300009147|Ga0114129_12085507All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300010044|Ga0126310_10674553All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300010044|Ga0126310_10852848Not Available705Open in IMG/M
3300010166|Ga0126306_10744926All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300010403|Ga0134123_11084334All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300011427|Ga0137448_1213574Not Available535Open in IMG/M
3300011437|Ga0137429_1092527All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium913Open in IMG/M
3300012040|Ga0137461_1226980All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria546Open in IMG/M
3300012668|Ga0157216_10083278All Organisms → cellular organisms → Bacteria1564Open in IMG/M
3300012899|Ga0157299_10094586Not Available762Open in IMG/M
3300014326|Ga0157380_13079095Not Available532Open in IMG/M
3300014487|Ga0182000_10329726All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300014745|Ga0157377_10592661All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300014877|Ga0180074_1134852Not Available553Open in IMG/M
3300015192|Ga0167646_1019650All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1740Open in IMG/M
3300015199|Ga0167647_1012131Not Available2696Open in IMG/M
3300017965|Ga0190266_10109410All Organisms → cellular organisms → Bacteria1156Open in IMG/M
3300018422|Ga0190265_10932895All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300018429|Ga0190272_10000183All Organisms → cellular organisms → Bacteria37924Open in IMG/M
3300018432|Ga0190275_10000151All Organisms → cellular organisms → Bacteria75365Open in IMG/M
3300018465|Ga0190269_10015261All Organisms → cellular organisms → Bacteria3453Open in IMG/M
3300018466|Ga0190268_10188590All Organisms → cellular organisms → Bacteria → Acidobacteria1109Open in IMG/M
3300018466|Ga0190268_11471131All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300018466|Ga0190268_11618501All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300018469|Ga0190270_10000001All Organisms → cellular organisms → Bacteria444653Open in IMG/M
3300018469|Ga0190270_12075903Not Available627Open in IMG/M
3300018476|Ga0190274_13225849Not Available549Open in IMG/M
3300018906|Ga0193609_1152442All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria630Open in IMG/M
3300018920|Ga0190273_10405355All Organisms → cellular organisms → Bacteria961Open in IMG/M
3300019377|Ga0190264_11361139Not Available605Open in IMG/M
3300019377|Ga0190264_11514313All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300019377|Ga0190264_12132383All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium519Open in IMG/M
3300019767|Ga0190267_10068643All Organisms → cellular organisms → Bacteria → Acidobacteria1292Open in IMG/M
3300019767|Ga0190267_11051829All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300020146|Ga0196977_1000047All Organisms → cellular organisms → Bacteria87617Open in IMG/M
3300020146|Ga0196977_1146242All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300020147|Ga0196976_1000078All Organisms → cellular organisms → Bacteria65246Open in IMG/M
3300020154|Ga0196965_1166739All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300020181|Ga0196958_10005465All Organisms → cellular organisms → Bacteria3617Open in IMG/M
3300020202|Ga0196964_10086289All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1367Open in IMG/M
3300020202|Ga0196964_10199653All Organisms → cellular organisms → Bacteria → Proteobacteria924Open in IMG/M
3300020202|Ga0196964_10463930All Organisms → cellular organisms → Bacteria → Acidobacteria616Open in IMG/M
3300021067|Ga0196978_1019448All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300021184|Ga0196959_10088668Not Available696Open in IMG/M
3300021272|Ga0213899_101513All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300021339|Ga0193706_1008543All Organisms → cellular organisms → Bacteria3635Open in IMG/M
3300021358|Ga0213873_10000002All Organisms → cellular organisms → Bacteria1164195Open in IMG/M
3300021388|Ga0213875_10069169Not Available1649Open in IMG/M
3300021968|Ga0193698_1001840All Organisms → cellular organisms → Bacteria2565Open in IMG/M
3300022904|Ga0247769_1110213Not Available696Open in IMG/M
3300023073|Ga0247744_1054307Not Available659Open in IMG/M
3300023168|Ga0247748_1047332Not Available648Open in IMG/M
3300024426|Ga0196960_10003588All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3989Open in IMG/M
3300024430|Ga0196962_10146933All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300025289|Ga0209002_10240133All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium ADurb.Bin1681095Open in IMG/M
3300025918|Ga0207662_10025064Not Available3434Open in IMG/M
3300025923|Ga0207681_11385875All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium590Open in IMG/M
3300025930|Ga0207701_10283747All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1440Open in IMG/M
3300027640|Ga0209347_1020702All Organisms → cellular organisms → Bacteria3437Open in IMG/M
3300027691|Ga0209485_1296522All Organisms → cellular organisms → Bacteria → Acidobacteria534Open in IMG/M
3300027907|Ga0207428_10000003All Organisms → cellular organisms → Bacteria799783Open in IMG/M
3300027909|Ga0209382_10002767All Organisms → cellular organisms → Bacteria24989Open in IMG/M
3300028578|Ga0272482_10011410All Organisms → cellular organisms → Bacteria2232Open in IMG/M
3300028578|Ga0272482_10039562All Organisms → cellular organisms → Bacteria → Acidobacteria1227Open in IMG/M
3300030510|Ga0268243_1057408All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300030533|Ga0247632_1009902Not Available629Open in IMG/M
3300031164|Ga0307502_10031050All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300031164|Ga0307502_10034439Not Available890Open in IMG/M
3300031455|Ga0307505_10087263Not Available1393Open in IMG/M
3300031901|Ga0307406_11671067All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300031911|Ga0307412_12085993Not Available526Open in IMG/M
3300032002|Ga0307416_103484159Not Available526Open in IMG/M
3300034008|Ga0334942_000534All Organisms → cellular organisms → Bacteria16738Open in IMG/M
3300034027|Ga0334949_026033All Organisms → cellular organisms → Bacteria → Acidobacteria1721Open in IMG/M
3300034131|Ga0334911_000127All Organisms → cellular organisms → Bacteria5873Open in IMG/M
3300034139|Ga0334956_000680All Organisms → cellular organisms → Bacteria11178Open in IMG/M
3300034145|Ga0334963_000035All Organisms → cellular organisms → Bacteria113614Open in IMG/M
3300034146|Ga0334964_000178All Organisms → cellular organisms → Bacteria40185Open in IMG/M
3300034173|Ga0334925_000235All Organisms → cellular organisms → Bacteria28122Open in IMG/M
3300034194|Ga0370499_0217823Not Available517Open in IMG/M
3300034760|Ga0334948_008430All Organisms → cellular organisms → Bacteria2520Open in IMG/M
3300034781|Ga0334935_003509All Organisms → cellular organisms → Bacteria4536Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil18.90%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere11.02%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil9.45%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil9.45%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil3.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.15%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil3.15%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.15%
BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust3.15%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.15%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.36%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil2.36%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.36%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest1.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.57%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Clay → Unclassified → Deep Subsurface1.57%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.57%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine0.79%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.79%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.79%
Ore Pile And Mine Drainage Contaminated SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Ore Pile And Mine Drainage Contaminated Soil0.79%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.79%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.79%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.79%
Hypolithic BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust0.79%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.79%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.79%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.79%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001372YB-Back-sedEnvironmentalOpen in IMG/M
3300002896Soil microbial communities from Manhattan, Kansas, USA - Sample 300um NexteraEnvironmentalOpen in IMG/M
3300003313Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P3 sampleEnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003366Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/23EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005905Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_105EnvironmentalOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011427Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2EnvironmentalOpen in IMG/M
3300011437Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2EnvironmentalOpen in IMG/M
3300012040Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2EnvironmentalOpen in IMG/M
3300012668Arctic soils microbial communities. Combined Assembly of 23 SPsEnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014877Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10DEnvironmentalOpen in IMG/M
3300015192Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)EnvironmentalOpen in IMG/M
3300015199Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)EnvironmentalOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018906Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 3 min after wetting v1EnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300020146Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13CEnvironmentalOpen in IMG/M
3300020147Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5-13CEnvironmentalOpen in IMG/M
3300020154Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_20EnvironmentalOpen in IMG/M
3300020181Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10EnvironmentalOpen in IMG/M
3300020202Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10EnvironmentalOpen in IMG/M
3300021067Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20-13CEnvironmentalOpen in IMG/M
3300021184Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20EnvironmentalOpen in IMG/M
3300021272Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hamp_Shaw_2EnvironmentalOpen in IMG/M
3300021339Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1EnvironmentalOpen in IMG/M
3300021358Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3Host-AssociatedOpen in IMG/M
3300021388Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8Host-AssociatedOpen in IMG/M
3300021968Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1EnvironmentalOpen in IMG/M
3300022904Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L166-409R-6EnvironmentalOpen in IMG/M
3300023073Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5EnvironmentalOpen in IMG/M
3300023168Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5EnvironmentalOpen in IMG/M
3300024426Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5EnvironmentalOpen in IMG/M
3300024430Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20EnvironmentalOpen in IMG/M
3300025289Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300027640Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/23 (SPAdes)EnvironmentalOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028578Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0EnvironmentalOpen in IMG/M
3300030510Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)EnvironmentalOpen in IMG/M
3300030533Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb9 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031164Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_SEnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300034008Biocrust microbial communities from Mojave Desert, California, United States - 38SMCEnvironmentalOpen in IMG/M
3300034027Biocrust microbial communities from Mojave Desert, California, United States - 45SNCEnvironmentalOpen in IMG/M
3300034131Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMSEnvironmentalOpen in IMG/M
3300034139Biocrust microbial communities from Mojave Desert, California, United States - 52SNCEnvironmentalOpen in IMG/M
3300034145Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 59SNSEnvironmentalOpen in IMG/M
3300034146Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 60SNSEnvironmentalOpen in IMG/M
3300034173Biocrust microbial communities from Mojave Desert, California, United States - 21HNCEnvironmentalOpen in IMG/M
3300034194Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17EnvironmentalOpen in IMG/M
3300034760Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 44SMSEnvironmentalOpen in IMG/M
3300034781Biocrust microbial communities from Mojave Desert, California, United States - 31SMCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10291649523300000956SoilMSPEFPIRVITDDGECEVIDSPDELLARVDSLDSTDPANRVWVRDALDRTVLIRMRSGFVEVLTVTE*
JGI10216J12902_11775200923300000956SoilMSPEFPLRIITDDGECQTVLSPEELLASVDSIDSTDPANRVWIRDAYDRTVDLRMRSGFIEILRLHF*
YBBDRAFT_116421423300001372Marine EstuarineMSPEFPIRIILDDGEAEIIDSPDDLMTRIDSIDSADEHVWIRDALDRTVRLRVRGGV
JGI24802J43972_100155133300002896SoilMSPEFPLRIITDDGECEVIASPDELMTRLDSIDSTGPSARVWVRDAYDRTVRIRVRGGIVEVLEV*
P32013IDBA_104204823300003313Ore Pile And Mine Drainage Contaminated SoilMSPEFPIRILTDDGECEVLDSPEELMARLHDFDSSDPRVWVRDAYDRTVRIVVRGGVVEVFDVAGSG*
soilL2_1011315133300003319Sugarcane Root And Bulk SoilMSPEFPIRVITDDGECEVIQSPDELMTTVDALDSTDPASRIWVRDAYDRTVRIRVRAGMVEILEITSDER*
JGI25321J50212_1006206723300003366Deep SubsurfaceVYQNMGPEFPLRIITDDGECQVVDTPEALLESLDSIDSTDPANRVWVRDVLDRTVRLRMVGGVVEVLELWR*
Ga0062589_10226300723300004156SoilMSPEFPIRVITDDGECEVIDSPDELLARVDSLDSTDPEGRVWIRDVLDRTVRLRMRNGIVEEITALDQ*
Ga0063356_10537308513300004463Arabidopsis Thaliana RhizosphereMAPEFPLRIITDDGDCEVIDSPEDLMARVDSLDSTDPSSRIWVRDAYDRTVRIRMRG
Ga0062595_10045765923300004479SoilMSPEFPIRVITDDGECDVIDSPEDLIARVDSLDSTDPAFRVWVRDALDRTVRLRMRGGVVEVLTAE*
Ga0065715_1061153213300005293Miscanthus RhizosphereMSPEFPIRIITDDGECEVIDSPEELMARIHDFNSDDPRVWVRDVYDRTVRLRVQGGLVEVLSAEC*
Ga0070689_10032633623300005340Switchgrass RhizosphereMAPEFPLRIITDDGECEVVQSPEDLIARVDSIDSTDPAGKVWVRDAYDRTVRIRMRAGAVEVLDAVET*
Ga0070689_10197147213300005340Switchgrass RhizosphereMAPEFPIRIIADDGDCEVIESPEELMSRVDSIDSVDPSARVWVRDAYDRTVRIRMRGGIVEVLECV*
Ga0070687_10020883823300005343Switchgrass RhizosphereMAPEFPLRIITDDGECDVIQSPEDLITRVESIDSTDPAGKVWVRDAYDRTVRIRMRAGAVEVLEIA*
Ga0070669_10150094423300005353Switchgrass RhizosphereQTMAPEFPLRIITDDGECEVVQSPEDLITRVESIDSTDPSGKVWVRDAYDRTVRIRMRAGAVEVLETA*
Ga0070674_10146968113300005356Miscanthus RhizosphereMAPEFPIRIITDDGECEVIDSPEDLMSRVDSLDSTDPAARVWVRDAYDRTVRIRTRGGIVEILEV*
Ga0070700_10185941313300005441Corn, Switchgrass And Miscanthus RhizosphereMSPEFPLRIITDDGQVEVIDSPEELMAQVDSIDSTAGHVWVRDAYDRTVTIVMR
Ga0070704_10034164413300005549Corn, Switchgrass And Miscanthus RhizosphereMSPEFPIRVITDDGQCEVIDSPDELLARVDSLDSTDPAGRVWIRDAFDRTVRLRMRNGIVEELTADSQ*
Ga0070702_10013478513300005615Corn, Switchgrass And Miscanthus RhizosphereMSPEFPIRIISDDGDCEVIDSPEELMSRVDSIDSTAAGARVWVRDAYDRTVRIRMRGGMIEELDC*
Ga0074470_1181575273300005836Sediment (Intertidal)MSPEFPIRIILDDGEAEIIDSPDDLMTRIDSIDSADEHVWIRDALDRTVRLRVRGGVVEVLDVE*
Ga0075269_1003588923300005905Rice Paddy SoilVSPEFPIRLIFDDGEAIVVESPDDLIAQVDTIDSADPVSGVWIRDALDRTVNLRMRSGIVEMIEVA*
Ga0082029_1693110953300006169Termite NestMSPDFPLRVITDDGEVEVIASPEELIRSVESLDSTDPRNRVWVRDAYDRTVRVRVRGGFVEMLEPA*
Ga0082029_1693110983300006169Termite NestMTPEFPLRILTDDGECEVVATPDDLIRTVESLDSTDPRNRVWVRDAYDRTVQVRVRGGLVEVLELVG*
Ga0075422_1001571323300006196Populus RhizosphereMSPEFPIRVITDDGECEVIDSPDELLARVDSLDSTDPEGRVWIRDALDRTVRLRMRNGIVEELTADSQ*
Ga0079222_1026568623300006755Agricultural SoilMSPEFPIRVITDDGDCEVIDSPEELITRVDSLDSTDPANRVWVRDALDRTVLVRVRGGMVEVLEVRA*
Ga0079222_1097048613300006755Agricultural SoilTDDGECEVIDSPDELLARVDSLDSTDPEGRVWIRDVLDRTVRLRMRNGIVEEITALDQ*
Ga0079220_1144694013300006806Agricultural SoilITDDGECEVIDSPEELVSRLHDIDSSDPRVWVRDVYDRTVKLVMRGGIVEVLSAES*
Ga0075428_10008153433300006844Populus RhizosphereMSPEFPIRILFDDGACEILDSPEDLLARVDSIDSSDPRVWVRDAHDRTVRLRMRGGMVELCEV*
Ga0075428_10046389923300006844Populus RhizosphereMSPEFPIRIITDDGECEVIQSPEELVSRLFDIDSADPRVWVRDAYDRTVTITMRGGMIEKFDV*
Ga0075421_1000000021623300006845Populus RhizosphereMAPEFPIRIISDDGRCEVVESPEELMTRVDSLDSTDPAVWVRDAFDRTVKIRMRGGIVEELDLQR*
Ga0075421_10026854713300006845Populus RhizosphereMSPEFPIRIIFDDGACEVLDSPEDLLARVDSIDSTDPRVWVRDANDRNVRLRMRGGMVEELSI*
Ga0075425_10000549153300006854Populus RhizosphereMSPEFPIRIITDDGDCEVIDSPEELLQRIDAIDSDDPRVWIRDALDRTVRLRMRGGMIEVLEV*
Ga0075429_10067155523300006880Populus RhizosphereMAPEFPIRIISDDGRCEVVESPEELMTRVDSLDSTDPAVWVRDAYDRTVRIRMRGGIVEELDLQR*
Ga0079215_1110426323300006894Agricultural SoilMTPEFPLRIITDDGECQVIASPEELMGAVDSIDSTDPANRVWVRDAYDRTVEIRMRGGFIEVLRVAT*
Ga0079215_1137799223300006894Agricultural SoilMSPEFPIRVITDDGECEVLDSPEELMRSVDSIDSTDPGNRVWIRDACDRTVEIRMRGGFIELLRLSG*
Ga0079216_1065626823300006918Agricultural SoilMQPEFPLRIITDDGECEVIASPEELMDSVDSLDSIDPANHVWVRDARDRTVEIRMRGGIIEVLQLSA*
Ga0079216_1198140313300006918Agricultural SoilEFPLRIITDDGECEVIASPEELMDSVDSLDSTDPGSRVWVRDACDRTVEIRMRGGIIEVLRLSA*
Ga0075419_1027213223300006969Populus RhizosphereMSPEFPIRVITDDGECEVIDSPDELLARVDSLDSTDPANRVWIRDAFDRTVRLRMRSGVVEELTADEPNNQ*
Ga0075419_1092184923300006969Populus RhizosphereMSPEFPIRILFDDGACEILDSPEDLLARVDSIDSSDPRVWVRDAHDRTVRLRM
Ga0079218_1034573023300007004Agricultural SoilMQPEFPLRIITDDGECEVIASPEELMASVDSLDSIDPANHVWVRDARDRTVEIRMRGGIIEVLQLSA*
Ga0079218_1155510523300007004Agricultural SoilMSPEFPIRVISDDGTCEVIDSPDDLITRVDSLDSTDPAGRSWVRDAFDRTVLIRMRGGMVEVLTLSPNQ*
Ga0079218_1214938223300007004Agricultural SoilMSPEFPLRIITDDGECEVIASPEELMDSVDSLDSTDPGSRVWVRDACDRTVEIRMRGGIIEVLRLSA*
Ga0079218_1362240513300007004Agricultural SoilMSPEFPIRILFDDGDCEVIDSPEELMERVNDLDSTDPRVWVRDAWDRTVTIRVRGGIVEELRVASSGLRG*
Ga0075418_1227281213300009100Populus RhizosphereMSPEFPIRVITDDGECEVIDSPDELLARVDSLDSTDPANRVWIRDAFDRTVRLRMRSGVVEELSTDEPNNQ*
Ga0114129_1166902313300009147Populus RhizosphereRILFDDGACEILDSPEDLLARVDSIDSSDPRVWVRDAHDRTVRLRMRGGMVELCEV*
Ga0114129_1208550723300009147Populus RhizosphereMAPEFPIRIITDDGECEVIDSPEELMTRVDSLDSTDPAARVWVRDAYDRTVQIRMRGGIVEVLSLCHSGV*
Ga0126310_1067455323300010044Serpentine SoilMSPEFPIRVITDDGTCEVIDSPDDLIARVDSLDSTDPANRTWVRDALDRTVLIRMRGGMVEVLTVEQG*
Ga0126310_1085284823300010044Serpentine SoilMAPEFPIRIITDEGDCEVVDSPEELMTRVDSLDSTDPSAKIWVRDAYDRTVRIRMRGGIVEVLEC*
Ga0126306_1074492613300010166Serpentine SoilMSPEFPFRIITEDGECEVIASADDLMTQVDSLDSTDPGNHVWVRDAYDRTVRVRIRGGFVEVFEL*
Ga0134123_1108433423300010403Terrestrial SoilMSPEFPIRIITDDGDCEVIDSPEELLAKVDSIDSTDPRVWVRDALDRSVTVRMRGGVIEVLRAEC*
Ga0137448_121357423300011427SoilMSPEFPIRVITDDGTCEVIDSPEELITRVDSLDSTDPANRIWVRDAFDRTVQIRMRGGFVEVLRAES*
Ga0137429_109252723300011437SoilMAPEFPIRIISDDGRCEVVESPEELMARVDSLDSTDPTVWVRDAYDRTVRIRMRGGIVEELDLQG*
Ga0137461_122698023300012040SoilMAPEFPIRIISDDGRCEVVESPEELMARVDSLDSTDPSVWVRDAYDRTVRIRMRGGIVEELTAE*
Ga0157216_1008327823300012668Glacier Forefield SoilMSPEFPIRVITDDGECEVIDSPDELLARIDSLDSTDPGNRVWVRDALDRTVRLRMRAGIVEVLSAENQ*
Ga0157299_1009458623300012899SoilMSPEFPIRVITDDGECEVIDSPDELLARVDSLDSTDPQGRVWIRDAFDRTVRLKMRNGIVEELTADSQ*
Ga0157380_1307909513300014326Switchgrass RhizosphereMSPEFPIRVITDDGECEVIDSPDELLARVDSLDSTDPHGRVWIRDAFDRTVRLKMRNGIVEELTADSQ*
Ga0182000_1032972623300014487SoilMSPEFPIRIITDDGEVEVIHSPEELMASVDSIDSTAGHVWVRDAYDRTVIIRMRGGVVEVLALATAG*
Ga0157377_1059266123300014745Miscanthus RhizosphereMSPEFPIRVITDDGACEVIDSPEELMSRVDSLDSTDPANRTWVRDAFDRTVLIRVRGGMVEVLELLS*
Ga0180074_113485223300014877SoilMAPEFPIRIISDDGGCEVIESPEELMIRVDSLDSADPRVWVRDAYDRTVRIRMRGGIVEELSVG*
Ga0167646_101965023300015192Glacier Forefield SoilESMAPEFPLRIIHDDGECIVVESPEDLIDEIDTLDSTDPVSRVWIRDALDRTVRLRVRHGFVEMLEV*
Ga0167647_101213123300015199Glacier Forefield SoilMAPEFPLRIIHDDGECIVVESPEDLIDEIDTLDSTDPVSRVWIRDALDRTVRLRVRHGFVEMLEV*
Ga0190266_1010941023300017965SoilMSPEFPIRVITDDGACEVIDTPDELMSRVDSLDSTDPGNRIWVRDALDRTVLIRMRSGMVEILKVETGNQ
Ga0190265_1093289523300018422SoilMSPEFPIRVISDDGACEVIDSPDELMTRVDSLDSTDPGNRIWVRDAFDRTVLIRMRGGVVEVLSVV
Ga0190272_10000183183300018429SoilMSPEFPIRIITDDGECEVVDSSDDLMARVHDLDSADPKVWVRDAYDRTVNVRVRGGMVEVFSL
Ga0190275_10000151703300018432SoilMSPEFPLRIISDDGSVEVVDSPDALMTHLDFVDSTDPRNRVWVRDVYDRTVRIRVRGGMVEVFELA
Ga0190269_1001526133300018465SoilLNLRDGGVYQNMAPEFPIRIISDDGSVEVIESPEELMARVDSLDSSDPRVWVRDAYDRTVRIRVNGGMVERFEI
Ga0190268_1018859013300018466SoilVYQIMTPEFPLRVITDDGECEVIDSPEELMTRVDFLDSTDPAAKVWVRDAYDRTVRVRVRGGWVEVLEV
Ga0190268_1147113113300018466SoilMMAPEFPIRIITDDGECEVIDSPEALMARVDSIDSSDPRVWVRDAYDRTVRLRVNGGMVEVLEV
Ga0190268_1161850123300018466SoilMSPEFPIRILTDDGECEVVDSPEDLMARVYDLDSADPKVWVRDAYDRTVNVRVRGGMVEVFSL
Ga0190270_100000012823300018469SoilMMAPEFPIRIITDDGECEVIDSPEALMARVDSIDSSDPRVWVRDAYDRTVRLRMNGGMVELLEV
Ga0190270_1207590313300018469SoilMSPEFPLRLISDDGSVEVISSPDDLMTHLDFVDSTDPRNRVWVRDAFDRTVRIRVRGGMVEV
Ga0190274_1322584923300018476SoilMSPEFPIRVITDDGQCEVIDSPDELMTRVDSLDSTDPANRVWVRDAFDRTVLLRLRAGVVEVLELIS
Ga0193609_115244223300018906SoilMTPEFPLRIITDDGECEVIDSPDDLLTAIDSIDSTDPAARIWVRDAYDRTVRLKMRGGAIEVLEA
Ga0190273_1040535523300018920SoilMSPEFPIRVITDDGACEVIDSPDELMRRVDSLDSTDPGNRIWVRDALDRTVLIRMRGGMVEILKVEIGNQ
Ga0190264_1136113923300019377SoilMSPEFPIRVITDDGECEVIDSPDELLARIDSLDSTDPGNRVWVRDALDRTVRLRMRSGIVEVLTAENQ
Ga0190264_1151431313300019377SoilMSPEFPIRVITDDGQCEVIDSPDELLARVDSLDSTDPANRVWVRDAFDRTVRIRMRGGIVEVMSADNQ
Ga0190264_1213238323300019377SoilMPPEFPLRIITDDGECEVIASPEELMQSVDSLDSTDPANHIWVRDAYDRTVLLRMRGGIVDVLKLA
Ga0190267_1006864323300019767SoilYQMMAPEFPIRIITDDGECEVIDSPEALMARVDSIDSSDPRVWVRDAYDRTVRLRVNGGMVELLEV
Ga0190267_1105182913300019767SoilMTPEFPIRIISDDGECEVIDSPEDLITRIDSLDSTTPDTRIWVRDVLDRTVRIRMRG
Ga0196977_1000047513300020146SoilMSPEFPIRVITDDGECEVIDSPDELLARIDNLDSTDTANRVWVRDALDRTVLIRMRGGLVEVLRVAD
Ga0196977_114624223300020146SoilMSPEFPIRVINDDGACEVIDSPDDLITRVDSLDSTDAASRIWVRDAFDRTVLIRMRGGMVEVLSVLTGSQ
Ga0196976_100007863300020147SoilMSPEFPIRIITDDGECEVLDSPEELMARLHDLDSDDPRVWVRDAYDRTVKIRVRGGMVERLDLSS
Ga0196965_116673923300020154SoilMAPEFPIRVITDDGDCEVIDSPEELMGRVDFLDSTDPASRVWVRDACDRTVRVRVRGGWVEVLEV
Ga0196958_1000546533300020181SoilMSPEFPLRIITDDGECQVVQSPDELMSSVDTIDSTDPRSRIWVRDAYDRTVRIRVRAGMVEVLDAVP
Ga0196964_1008628923300020202SoilMSPEFPIRIITDDGECEVIDSPEELMARLHDLDSEHPRVWVRDAYDRTVHVRVRGGMVERFEC
Ga0196964_1019965323300020202SoilMAPEFPIRIITDDGECEVIRSPEELMASVDSLDSTDPAARVWVRDAYDRTVRIRMRGGIVEILSVE
Ga0196964_1046393023300020202SoilMSPEFPIRIITDDGQCEVIDSPEELITRVDSLDSTDPRNRVWVRDAYDRTVQIRMRGGIVEVLTLSS
Ga0196978_101944833300021067SoilMSPEFPIRVITDDGECEVLDSPEELLTRVDSLDSTDPANRVWVRDALDRTVLIR
Ga0196959_1008866823300021184SoilMAPEFPIRIITDDGECEVIDSPEELLARVDSLDSTDPRGRVWVRDAYDRTVRVRMRGGIVEVLDLAR
Ga0213899_10151323300021272SoilMAPEFPIRIISDDGRCEVVESPEELMARVDSLDSADPAVWVRDAYDRTVKIRVRGGIVEELDLQR
Ga0193706_100854333300021339SoilMAPEFPLRIITDDGDCQVVQSPEELINQVDSLDTTDPANRVWVRDAWDRTVLIRMRGGMVEVLETG
Ga0213873_100000027113300021358RhizosphereMAPEFPIRILNDEGECEVIASPEELMERIDSIDSTDPAAKIWVRDAYDRTVRIRMRGGMVVELSC
Ga0213875_1006916933300021388Plant RootsMPPEFPLRILFDDGAVEIIDSPEELMQLVDSIDSGDPAARTWVRDAYDRSVVLRMRHGIVEAFTLA
Ga0193698_100184033300021968SoilMSPEFPIRVITDDGECEVIDSPDELLARVDSLDSTDPANRVWVRDAFDRTVRIRMRGG
Ga0247769_111021323300022904Plant LitterMTPEFPIRIITDDGECEEIDSPEELLERVDTIDSTDRAARIWVRDALDRTVTLRMRGGTVVEFDATPSS
Ga0247744_105430713300023073SoilMSPEFPIRVITDDGSCEVIDSPDDLITRVDSLDSTDPANRIWVRDAFDRTVLVRMRGGTVEVLEAVSGDQ
Ga0247748_104733223300023168SoilMAPEFPIRVITDDGEVEVIDSPEELMARVDSLDSTSPDARVWVRDVYDRTVRVRVRGGWVEVLEV
Ga0196960_1000358823300024426SoilMMAPEFPIRIITDDGECEVIDSPEALMARVDSIDSSDPRVWVRDAYDRTVRLRVNGGMVELLEV
Ga0196962_1014693323300024430SoilMSPEFPIRIITDDGECEVIDSPEELMARLHDLDSDHPRVWVRDAYDRTVRIRVRGGMVEEFAVSS
Ga0209002_1024013323300025289SoilMAPEFPIRIITDDGECEVIDSPEELMGRVDSLDSTDPGGRVWVRDAYDRTVRLRMRGGIVDVLEC
Ga0207662_1002506453300025918Switchgrass RhizosphereMAPEFPLRIITDDGECDVIQSPEDLITRVESIDSTDPAGKVWVRDAYDRTVRIRMRAGAVEVLEIA
Ga0207681_1138587523300025923Switchgrass RhizosphereQTMAPEFPLRIITDDGECEVVQSPEDLITRVESIDSTDPSGKVWVRDAYDRTVRIRMRAGAVEVLETA
Ga0207701_1028374723300025930Corn, Switchgrass And Miscanthus RhizosphereMAPEFPLRIITDDGECEVVQSPEDLIARVDSLDSTDPSGKVWVRDAYDRTVRIRMRAGAVEVLDAVES
Ga0209347_102070223300027640Deep SubsurfaceVLLQTGSEGWQVYQNMGPEFPLRIITDDGECQVVDTPEALLESLDSIDSTDPANRVWVRDVLDRTVRLRMVGGVVEVLELWR
Ga0209485_129652223300027691Agricultural SoilMQPEFPLRIITDDGECEVIASPEELMDSVDSLDSTDPGSRVWVRDACDRTVEIRMRGGIIEVLRLSA
Ga0207428_100000034203300027907Populus RhizosphereMSPEFPIRVITDDGECEVIDSPDELLARVDSLDSTDPEGRVWIRDALDRTVRLRMRNGIVEELTADSQ
Ga0209382_10002767233300027909Populus RhizosphereMAPEFPIRIISDDGRCEVVESPEELMTRVDSLDSTDPAVWVRDAFDRTVKIRMRGGIVEELDLQR
Ga0272482_1001141013300028578SoilTLHRMSPEFPLRIITDDGDCEVIASPEELVQAVVSIDSTDPRNRVWVRDAYDRTVRIKVRGGVVEVLELA
Ga0272482_1003956223300028578SoilMSPEFPLRIITDDGECEVIASPDELMTRLDSIDSTDPATRVWVRDAYDRTVRIRVRGGMVEVLEVDGVA
Ga0268243_105740813300030510SoilMSPEFPIRIITDDGEVEVIHSPEELMASVDSIDSTAGHVWVRDAYDRTVIIRMRGGVVEVLALATAG
Ga0247632_100990223300030533SoilMSPEFPLRIITDEGEVEVIGSPEELVQAVVSVDSTDPRNRVWVRDAYDRTVRMRVRGGAVEVLELA
Ga0307502_1003105013300031164SoilMSPEFPIRVITDDGGCEVIDSPDELMKRVDSLDSTDPGNRIWVRDALDRTVLIRMRGGTVEVLEIE
Ga0307502_1003443913300031164SoilMSPEFPIRILTDDGVCEVVDSPEDLIARIYDLDSADPKVWVRDAYDRTVNVRVRGGMVEEFSL
Ga0307505_1008726323300031455SoilMSPEFPIRIISDDGDCEVVETPEELLARVDSIDSTTSDARVWVRDALDRTVLLRMRNGMVELFSVR
Ga0307406_1167106723300031901RhizosphereMSPEFPIRILFDDGDCEVIASPEELMERVNDLDSEDPRVWVRDAWDRTVVLRVRGGIVEELRVASSELR
Ga0307412_1208599323300031911RhizosphereMTPEFPLRIITDEGECEVITSPDDLIQRVDSLDSTDPRGRVWVRDALDRTVLLRMRGGMIEVLTIRP
Ga0307416_10348415923300032002RhizosphereMTPEFPLRIITDEGECEVITSPDDLIQRVDSLDSTDPRGRVWVRDALDRTVLLRMRGGMIEVLAIRP
Ga0334942_000534_13304_134953300034008BiocrustMSPEFPIRILTDDGECEVVDSPEDLMARVYDVDSADPKVWVRDAYDRTVNIRVRGGMVEVFSL
Ga0334949_026033_852_10523300034027BiocrustMMAPEFPIRIITDDGECEVIDSPDDLMARVDSIDSSDPRVWVRDVYDRTVHLRMNGGVVELLEVGG
Ga0334911_000127_1860_20573300034131Sub-Biocrust SoilMQPDFPIRIITDDGELTEIASPDELIEQIDALDSTDPANRVWVRDASDRTVRIRIRYGRIEVLEV
Ga0334956_000680_5648_58453300034139BiocrustMKPEFPIRIINDEGECEVIDSPEELMGQIDSLDSTDPSARIWVRDVYDRTVRLRMRGGIVLELSV
Ga0334963_000035_19132_193323300034145Sub-Biocrust SoilMMAPEFPLRVITDDGDCEVIDSPEELTSRVDFLDSTDPSARVWVRDAYDRTVRVRVRGGWVEVLEV
Ga0334964_000178_25273_254763300034146Sub-Biocrust SoilMSPEFPIRIITDEGDCEVIDSPEQLIAQVDALDSTDPGNRVWVRDALDRTVKIRVRGGMVEVLEAVP
Ga0334925_000235_1994_21883300034173Hypolithic BiocrustMPAPEFPIRIITDDGTVEVIDSPEELMARVDSIDSGDPRVWVRDALDRTVVIRMRDGMVEVLTC
Ga0370499_0217823_74_2803300034194Untreated Peat SoilMSPEFPIRVITDDGECEVIDTPDELLARVDSLDSTDPGNRVWVRDALDRTVRLRMRSGIVEVLSADNQ
Ga0334948_008430_393_6173300034760Sub-Biocrust SoilMSPEFPIRIITDDGEVEVIDSPEELMARLHDLDSDHPRVWVRDAYDRTVTIKMRGGIVERFTTSDERSAPRDER
Ga0334935_003509_2879_30763300034781BiocrustMIAPEFPIRIITDDGDCEEIESPEALMARVDSIDSSDPRVWVRDALDRTVRLRMRGGILEELETA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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