Metagenome Family F066162

Basic Information
Family ID	F066162
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	95 residues
Representative Sequence	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRLTLVLAGFILLVLIAELVARFFAEQGVR
Number of Associated Samples	116
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	49.61 %
% of genes near scaffold ends (potentially truncated)	37.80 %
% of genes from short scaffolds (< 2000 bps)	94.49 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (55.118 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (10.236 % of family members)
Environment Ontology (ENVO)	Unclassified (48.031 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (77.165 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 84.04% β-sheet: 0.00% Coil/Unstructured: 15.96%
Feature Viewer

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Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF07007	LprI	3.15
PF00933	Glyco_hydro_3	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	3.15
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
All Organisms	root	All Organisms	44.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
cellular organisms	root	All Organisms → cellular organisms	44.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.50 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	29.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	27.56 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.57 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	27.56 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	1.57 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	27.56 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	1.57 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.79 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	27.56 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	1.57 %
Bradyrhizobium sp. AUGA SZCCT0182	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0182	0.79 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000787\|JGI11643J11755_11837504	Not Available	506	Open in IMG/M
3300000955\|JGI1027J12803_101235681	Not Available	529	Open in IMG/M
3300004114\|Ga0062593_100373349	All Organisms → cellular organisms → Bacteria → Proteobacteria	1260	Open in IMG/M
3300004156\|Ga0062589_100540946	Not Available	994	Open in IMG/M
3300004463\|Ga0063356_102842944	Not Available	746	Open in IMG/M
3300004479\|Ga0062595_100133285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0182	1406	Open in IMG/M
3300004643\|Ga0062591_100745240	All Organisms → cellular organisms → Bacteria → Proteobacteria	894	Open in IMG/M
3300005327\|Ga0070658_11337047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	622	Open in IMG/M
3300005329\|Ga0070683_101826163	Not Available	584	Open in IMG/M
3300005330\|Ga0070690_100100772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1915	Open in IMG/M
3300005335\|Ga0070666_11464234	Not Available	511	Open in IMG/M
3300005340\|Ga0070689_100265545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1420	Open in IMG/M
3300005354\|Ga0070675_100091782	Not Available	2545	Open in IMG/M
3300005355\|Ga0070671_100316667	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300005365\|Ga0070688_100377796	All Organisms → cellular organisms → Bacteria → Proteobacteria	1044	Open in IMG/M
3300005366\|Ga0070659_100261276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1436	Open in IMG/M
3300005366\|Ga0070659_100657571	Not Available	904	Open in IMG/M
3300005434\|Ga0070709_10237178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1308	Open in IMG/M
3300005437\|Ga0070710_10280528	Not Available	1081	Open in IMG/M
3300005438\|Ga0070701_10058676	Not Available	2021	Open in IMG/M
3300005439\|Ga0070711_100130875	All Organisms → cellular organisms → Bacteria → Proteobacteria	1868	Open in IMG/M
3300005457\|Ga0070662_100249422	Not Available	1426	Open in IMG/M
3300005457\|Ga0070662_100835937	Not Available	784	Open in IMG/M
3300005458\|Ga0070681_11603709	Not Available	576	Open in IMG/M
3300005535\|Ga0070684_100545785	Not Available	1075	Open in IMG/M
3300005545\|Ga0070695_100259968	All Organisms → cellular organisms → Bacteria → Proteobacteria	1267	Open in IMG/M
3300005545\|Ga0070695_100349402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1107	Open in IMG/M
3300005548\|Ga0070665_101632314	Not Available	652	Open in IMG/M
3300005563\|Ga0068855_101423597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	714	Open in IMG/M
3300005563\|Ga0068855_101754381	Not Available	632	Open in IMG/M
3300005577\|Ga0068857_100677286	Not Available	979	Open in IMG/M
3300005614\|Ga0068856_100105304	All Organisms → cellular organisms → Bacteria	2815	Open in IMG/M
3300005617\|Ga0068859_102251378	Not Available	601	Open in IMG/M
3300005764\|Ga0066903_100996975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1531	Open in IMG/M
3300005841\|Ga0068863_101271207	Not Available	743	Open in IMG/M
3300005843\|Ga0068860_102036223	Not Available	596	Open in IMG/M
3300005844\|Ga0068862_100417949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1258	Open in IMG/M
3300006163\|Ga0070715_11001495	Not Available	521	Open in IMG/M
3300006175\|Ga0070712_100105579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2092	Open in IMG/M
3300006196\|Ga0075422_10511877	Not Available	546	Open in IMG/M
3300006358\|Ga0068871_101432372	Not Available	652	Open in IMG/M
3300006755\|Ga0079222_10315357	Not Available	1032	Open in IMG/M
3300006804\|Ga0079221_10596061	Not Available	744	Open in IMG/M
3300006846\|Ga0075430_101114879	Not Available	650	Open in IMG/M
3300006871\|Ga0075434_100418693	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300006881\|Ga0068865_101060673	Not Available	712	Open in IMG/M
3300006903\|Ga0075426_10389013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1028	Open in IMG/M
3300006969\|Ga0075419_11500902	Not Available	506	Open in IMG/M
3300007076\|Ga0075435_100686988	Not Available	889	Open in IMG/M
3300007076\|Ga0075435_101140032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	682	Open in IMG/M
3300009092\|Ga0105250_10429382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	590	Open in IMG/M
3300009093\|Ga0105240_12339586	Not Available	553	Open in IMG/M
3300009094\|Ga0111539_12815013	Not Available	563	Open in IMG/M
3300009098\|Ga0105245_10365432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1433	Open in IMG/M
3300009098\|Ga0105245_11920235	Not Available	645	Open in IMG/M
3300009100\|Ga0075418_10637701	Not Available	1147	Open in IMG/M
3300009147\|Ga0114129_10701364	Not Available	1301	Open in IMG/M
3300009147\|Ga0114129_12996878	Not Available	555	Open in IMG/M
3300009148\|Ga0105243_10874582	Not Available	892	Open in IMG/M
3300009174\|Ga0105241_10701147	Not Available	924	Open in IMG/M
3300009176\|Ga0105242_10255867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1580	Open in IMG/M
3300009553\|Ga0105249_10283803	All Organisms → cellular organisms → Bacteria → Proteobacteria	1655	Open in IMG/M
3300010371\|Ga0134125_11990421	Not Available	632	Open in IMG/M
3300010396\|Ga0134126_11764910	Not Available	679	Open in IMG/M
3300010397\|Ga0134124_11377634	Not Available	730	Open in IMG/M
3300010398\|Ga0126383_12961008	Not Available	555	Open in IMG/M
3300010401\|Ga0134121_10659318	Not Available	987	Open in IMG/M
3300010403\|Ga0134123_10686065	All Organisms → cellular organisms → Bacteria → Proteobacteria	999	Open in IMG/M
3300011119\|Ga0105246_10083186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2286	Open in IMG/M
3300012906\|Ga0157295_10359819	Not Available	530	Open in IMG/M
3300012907\|Ga0157283_10406777	Not Available	508	Open in IMG/M
3300012915\|Ga0157302_10216719	Not Available	697	Open in IMG/M
3300012951\|Ga0164300_10776545	Not Available	591	Open in IMG/M
3300012961\|Ga0164302_11263512	Not Available	594	Open in IMG/M
3300012961\|Ga0164302_11728392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	525	Open in IMG/M
3300012989\|Ga0164305_11771387	Not Available	557	Open in IMG/M
3300013102\|Ga0157371_10603815	Not Available	816	Open in IMG/M
3300013105\|Ga0157369_11186654	Not Available	779	Open in IMG/M
3300013296\|Ga0157374_10176462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2086	Open in IMG/M
3300013296\|Ga0157374_10402455	Not Available	1366	Open in IMG/M
3300013306\|Ga0163162_10716453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1121	Open in IMG/M
3300014325\|Ga0163163_10828148	Not Available	989	Open in IMG/M
3300014745\|Ga0157377_10360589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	978	Open in IMG/M
3300014968\|Ga0157379_11792935	Not Available	603	Open in IMG/M
3300014969\|Ga0157376_10174243	All Organisms → cellular organisms → Bacteria	1961	Open in IMG/M
3300015371\|Ga0132258_12166460	All Organisms → cellular organisms → Bacteria → Proteobacteria	1396	Open in IMG/M
3300015372\|Ga0132256_101477457	Not Available	791	Open in IMG/M
3300015373\|Ga0132257_100734440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1229	Open in IMG/M
3300019361\|Ga0173482_10026079	Not Available	1717	Open in IMG/M
3300022883\|Ga0247786_1105708	Not Available	611	Open in IMG/M
3300022883\|Ga0247786_1148610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	527	Open in IMG/M
3300025315\|Ga0207697_10398059	Not Available	612	Open in IMG/M
3300025711\|Ga0207696_1200962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	523	Open in IMG/M
3300025898\|Ga0207692_10108273	Not Available	1537	Open in IMG/M
3300025900\|Ga0207710_10056479	Not Available	1771	Open in IMG/M
3300025906\|Ga0207699_10428751	Not Available	945	Open in IMG/M
3300025915\|Ga0207693_10201131	All Organisms → cellular organisms → Bacteria → Proteobacteria	1567	Open in IMG/M
3300025918\|Ga0207662_10152037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1473	Open in IMG/M
3300025919\|Ga0207657_10191444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1650	Open in IMG/M
3300025924\|Ga0207694_10753038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	822	Open in IMG/M
3300025926\|Ga0207659_11269427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	633	Open in IMG/M
3300025929\|Ga0207664_10610862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	979	Open in IMG/M
3300025931\|Ga0207644_10747794	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300025934\|Ga0207686_11359509	Not Available	584	Open in IMG/M
3300025937\|Ga0207669_10233540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1358	Open in IMG/M
3300025938\|Ga0207704_10591232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	907	Open in IMG/M
3300025939\|Ga0207665_10150944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1664	Open in IMG/M
3300025941\|Ga0207711_10208891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1783	Open in IMG/M
3300025942\|Ga0207689_10524741	Not Available	993	Open in IMG/M
3300025949\|Ga0207667_10698455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1017	Open in IMG/M
3300025972\|Ga0207668_11306424	Not Available	653	Open in IMG/M
3300025981\|Ga0207640_10060074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2511	Open in IMG/M
3300026023\|Ga0207677_11730784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	580	Open in IMG/M
3300026035\|Ga0207703_10981757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	810	Open in IMG/M
3300026075\|Ga0207708_10487544	Not Available	1031	Open in IMG/M
3300026078\|Ga0207702_12234909	Not Available	535	Open in IMG/M
3300026088\|Ga0207641_10749099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	964	Open in IMG/M
3300026089\|Ga0207648_11718432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	589	Open in IMG/M
3300026095\|Ga0207676_10354222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1358	Open in IMG/M
3300026116\|Ga0207674_10387448	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300026116\|Ga0207674_11219875	Not Available	722	Open in IMG/M
3300026900\|Ga0207444_1007308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	761	Open in IMG/M
3300027876\|Ga0209974_10267429	Not Available	647	Open in IMG/M
3300027907\|Ga0207428_10463784	Not Available	923	Open in IMG/M
3300031858\|Ga0310892_10726975	Not Available	683	Open in IMG/M
3300032013\|Ga0310906_11046200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	588	Open in IMG/M
3300032211\|Ga0310896_10744818	Not Available	558	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	60.63%
Environmental	Environmental	39.37%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	60.63%
Terrestrial	Environmental → Terrestrial	39.37%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	37.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.26%
Roots	Host-Associated → Plants → Roots	1.57%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.68%
Loam	Environmental → Terrestrial → Soil → Loam	17.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.57%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.57%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.02%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.09%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.57%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.24%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.30%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.15%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.36%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.57%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026900	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K4-12 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J11755_118375041	3300000787	Soil	MVGKRTKADFERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEQSERKKSRDSKNLLTLARRTARDTRLTLVLVGFILLVLIAELVARFFTGQGVR*
JGI1027J12803_1012356811	3300000955	Soil	MVGKRTKADFERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLTLVLVGFILLVLIAELVARFFTGQGVR*
Ga0062593_1003733492	3300004114	Soil	MVGARTKAEFEQEGAEAVREHVEKGDYWEGKKQLAIKWLNQQDPQWKRDRDIKALLKAARRTARDTRLTLVLAGFILLVLIAIAIRVFLR*
Ga0062589_1005409463	3300004156	Soil	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0063356_1028429442	3300004463	Arabidopsis Thaliana Rhizosphere	MVGKRTRADFERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEQSERKKSRDSKNLLTLARRTARDTRLTLVLVGFILLVLIAELVARFFTGQGVR*
Ga0062595_1001332854	3300004479	Soil	RQLRVVAPLHNEVEMVGARTKAEFEQEGAEAVREHVEKGDYWEGKKQLAIKWLNQQDPQWKRDRDIKALLKAARRTARDTRLTLVLAGFILLVLIAIAIRVFLR*
Ga0062591_1007452401	3300004643	Soil	VREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0070658_113370472	3300005327	Corn Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0070683_1018261631	3300005329	Corn Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTGQGVR*
Ga0070690_1001007724	3300005330	Switchgrass Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0070666_114642341	3300005335	Switchgrass Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRLTLVLAGFILLVLIAELVARFFIE*
Ga0070689_1002655453	3300005340	Switchgrass Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0070675_1000917821	3300005354	Miscanthus Rhizosphere	VILRRLSILASARDIHDNIAKGGRMVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0070671_1003166673	3300005355	Switchgrass Rhizosphere	MVGARTKAEFEQEGAEAVREHVEKGDYWEGKKQLAIKWLNQQDPQWKRDRDIKALLKAARRTARDTRLTLVLAGFILLVLIAIAIRVFLH*
Ga0070688_1003777962	3300005365	Switchgrass Rhizosphere	MVGKEAKAEFERDGVRAVREHVEQGSYWEGKKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0070659_1002612761	3300005366	Corn Rhizosphere	RAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0070659_1006575711	3300005366	Corn Rhizosphere	ARTKAEFEQEGAEAVREHVEKGDYWEGKKQLAIKWLNQQDPQWKRDRDIKALLKAARRTARDTRLTLVLAGFILLVLIAIAIRVFLR*
Ga0070709_102371781	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0070710_102805282	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0070701_100586766	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0070711_1001308754	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0070662_1002494221	3300005457	Corn Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTGQGVR*
Ga0070662_1008359371	3300005457	Corn Rhizosphere	MVGKEAKAEFERDGVRAVREHVEQGSYWEGKKQQAIKWLAEQSERKKSRNTKALLTLARRTARDARLTLVLAGFILLVLIAELVA
Ga0070681_116037092	3300005458	Corn Rhizosphere	MVRKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0070684_1005457853	3300005535	Corn Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLV
Ga0070695_1002599684	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	REQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLTRRTARDTRLTLVLAGFILLVLIAELVARFFTEQGVR*
Ga0070695_1003494022	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MLGKKAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0070665_1016323141	3300005548	Switchgrass Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELAARFFIE*
Ga0068855_1014235971	3300005563	Corn Rhizosphere	SILASARDIHDNIAKGGRMVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0068855_1017543811	3300005563	Corn Rhizosphere	GVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0068857_1006772862	3300005577	Corn Rhizosphere	MLGKKAKAEFERDGVRAVREHVEQGSYWEGKKQQAIKWLAEQSERKKSRNTKALLTLARRTARDARLTLLLAGFILLVLIAELVARFFTGQGVR*
Ga0068856_1001053044	3300005614	Corn Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQTERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0068859_1022513781	3300005617	Switchgrass Rhizosphere	MLGKKAKAEFERDGVRAVREHVEQGSYWEGKKQQAIKWLAEQSERKKSRNTKALLTLARRTARDARLTLVLAGFILLVLIAELVA
Ga0066903_1009969752	3300005764	Tropical Forest Soil	MIGKRTKAEFAREGIEAVRNKVKQGDYWEGEKQYAIKWLAEQSQKKKSRDTKRLLTLARRTARDTRLTLVLAAFILLVLIAEVVARFFI*
Ga0068863_1012712071	3300005841	Switchgrass Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTGQGVR*
Ga0068860_1020362232	3300005843	Switchgrass Rhizosphere	GGRMVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0068862_1004179491	3300005844	Switchgrass Rhizosphere	GVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0070715_110014951	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTGQGVR*
Ga0070712_1001055791	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0075422_105118771	3300006196	Populus Rhizosphere	MVGKRTKADFERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLTLVLVGFILLVLIAELAARFFIE*
Ga0068871_1014323722	3300006358	Miscanthus Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0079222_103153572	3300006755	Agricultural Soil	MVGKRTKADFERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLILVLVGFILLVLIAELAARFFIE*
Ga0079221_105960612	3300006804	Agricultural Soil	MVGKRTKADFERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLTLVLVGFILLVLIAELAARFFTGQGVR*
Ga0075430_1011148792	3300006846	Populus Rhizosphere	MVSKRTKADFERAGVEAVRRQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0075434_1004186932	3300006871	Populus Rhizosphere	MVGARTKAEFEQEGAEAVREHVEKGDYWEGKKQLAIKWLNQQDPQWKRDRDIKALLKAARRTARDTRLTLVLAGFILLVLIAISIRVFLR*
Ga0068865_1010606731	3300006881	Miscanthus Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0075426_103890133	3300006903	Populus Rhizosphere	MVGKRTKADFERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0075419_115009021	3300006969	Populus Rhizosphere	MVGKRTKADFERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLTLVLAGFILLVLIAELAARFFIE*
Ga0075435_1006869882	3300007076	Populus Rhizosphere	LHNEVEMVGARTKAEFEQEGAEAVREHVEKGDYWEGKKQLAIKWLNQQDPQWKRDRDIKALLKAARRTARDTRLTLVLAGFILLVLIAISIRVFLR*
Ga0075435_1011400321	3300007076	Populus Rhizosphere	VILRRLSILASARDIHDNIAKGGRMVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0105250_104293822	3300009092	Switchgrass Rhizosphere	VAKRNWRMVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0105240_123395861	3300009093	Corn Rhizosphere	VILRRLSILASARDIHDNIAKGGRMVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLVLAGFILLVLIAELAARFFIE*
Ga0111539_128150132	3300009094	Populus Rhizosphere	FERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLTLVLVGFILLVLIAELVARFFTGQGVR*
Ga0105245_103654324	3300009098	Miscanthus Rhizosphere	VRAVREHVEQGSYWEGKKQQAIKWLAEQSERKKSRNTKALLTLARRTARDARLTLVLAGFILLVLIAELVARFFAEQGVR*
Ga0105245_119202352	3300009098	Miscanthus Rhizosphere	GVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELEARFFTEQGVR*
Ga0075418_106377012	3300009100	Populus Rhizosphere	MSWTGCEGFDKPRYIWGVGFGWRPSAILICPRPKEVVAMVGKRTKADFERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLTLVLVGFILLVLIAELVARFFTGQGVR*
Ga0114129_107013642	3300009147	Populus Rhizosphere	AVRRQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLTLVLVGFILLVLIAELVARFFTGQGVR*
Ga0114129_129968781	3300009147	Populus Rhizosphere	MVGARTKAEFEQEGAEAVREHVEKGDYWEGKKQLAIKWLNQQDLQWKRDRDIKALLKAARRTARDTRLTLVLAGFILLVLIAIAIRVFLR*
Ga0105243_108745821	3300009148	Miscanthus Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDTKKLLTLARRIARDTRLTLVLAGFILLVLIAELAARFFH*
Ga0105241_107011472	3300009174	Corn Rhizosphere	MLGKKAKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLVLAGFILLVLIAELAARFFIE*
Ga0105242_102558674	3300009176	Miscanthus Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVTRFFTGQGVR*
Ga0105249_102838031	3300009553	Switchgrass Rhizosphere	MLGKKAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0134125_119904212	3300010371	Terrestrial Soil	MRGKKAKEEFERDGVRAVREHVEQGSYWEGKKQQAIKWLAEQSERKKSRNTKALFTLARRTARDTRLTLVLAGFILLVLIAELAARFFH*
Ga0134126_117649102	3300010396	Terrestrial Soil	MVGRLTKAEFERDGVEAVRRKVEQGDYWEGEKQQAIGWLAEQFKRKKSRDTKNLLTLARRTARDTRLTLYLAGLILLVLIAIAIRVFLR*
Ga0134124_113776342	3300010397	Terrestrial Soil	MLGKKAKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSERKKSRNTKALLTLARRTARDTRLTLVLAGFILLVLIAELAARFFIE*
Ga0126383_129610081	3300010398	Tropical Forest Soil	MIGKRTKAEFARDGIEAVRKKVKQGDYWEGEKQYAIKWLAEQSQKKKSRDTKRLLTLARRTARDTRLTLVLAAFILLVLIAEVVARFFI*
Ga0134121_106593181	3300010401	Terrestrial Soil	VILRRLSILASARDIHDNIAKGGRMVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDTKKLLTLSRRTARDTRLTLVLVGFILLVLIAELVARFFTGQGVR*
Ga0134123_106860651	3300010403	Terrestrial Soil	ASARDIHDNIAKGGRMVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0105246_100831863	3300011119	Miscanthus Rhizosphere	MLGKKAKAEFERDGVRAVREHVEQGSYWEGKKQQAIKWLAEQSERKKSRNTKALLTLARRTARDARLTLVLAGFILLVLIAELVARFFAEQGVR*
Ga0157295_103598192	3300012906	Soil	GVGFGRRSFCYIARVVKRNWRMVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLVLAGFILLVLIAELVARFFTGQGVR*
Ga0157283_104067771	3300012907	Soil	MVGKRAKADFERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLTLVLAGFILLVLIAELAARFFIE*
Ga0157302_102167191	3300012915	Soil	AFCYTALVAKRNWRMVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0164300_107765452	3300012951	Soil	VILRRLRILASARDIHDIIAKGGRMVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0164302_112635122	3300012961	Soil	MVGRLTKAEFERDGVEAVRRKVEQGDYWEGEKQQAIGWLAEQFKRKKSRDTKNLLTLARRTARDTRLTLFLAGLILLVLIAIAIRVFLR
Ga0164302_117283921	3300012961	Soil	IHDNIAKGGRMVSKRTKADLERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFAEQGVR*
Ga0164305_117713871	3300012989	Soil	GFGRRPFCYIALVAKRNWRMVGKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0157371_106038152	3300013102	Corn Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLVLAGFILLVLIAELVARFFTGQGVR*
Ga0157369_111866541	3300013105	Corn Rhizosphere	VILRRLSILASARDIHDNIAKGGRMVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFTGQGVR*
Ga0157374_101764621	3300013296	Miscanthus Rhizosphere	TSCPYSTLNLLFRQLRVVAPLHNEVEMVGARTKAEFEQEGAEAVREHVEKGDYWEGKKQLAIKWLNQQDPQWKRDRDIKALLKAARRTARDTRLTLVLAGFILLVLIAIAIRVFLR*
Ga0157374_104024553	3300013296	Miscanthus Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVH*
Ga0163162_107164532	3300013306	Switchgrass Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0163163_108281482	3300014325	Switchgrass Rhizosphere	MVRKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTGQGVR*
Ga0157377_103605893	3300014745	Miscanthus Rhizosphere	WGVGFGWRLSAILICPRPKEVVAMVGKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR*
Ga0157379_117929351	3300014968	Switchgrass Rhizosphere	GKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTGQGVR*
Ga0157376_101742431	3300014969	Miscanthus Rhizosphere	VILRRLSILASARDIHDNIAKGGRMVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFVEPGVR*
Ga0132258_121664601	3300015371	Arabidopsis Rhizosphere	VILRRLSILASARDIHDNIAKGGRMVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0132256_1014774571	3300015372	Arabidopsis Rhizosphere	VILRRLSILASARDIHDNIAKGGRMVSKRTKADFERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR*
Ga0132257_1007344401	3300015373	Arabidopsis Rhizosphere	VGFGRRPSAILICPRPKEVVAMVGKRTKADFERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLTLVLAGFILLVLIAELVARFFAEKGVR*
Ga0173482_100260791	3300019361	Soil	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAE
Ga0247786_11057082	3300022883	Soil	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR
Ga0247786_11486101	3300022883	Soil	MVGARTKAEFEQEGAEAVREHVEKGDYWEGKKQLAIKWLNQQDPQWKRDRDIKALLKAARRTARDTRLTLVLAGFILLVLIAIAIRVF
Ga0207697_103980591	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	FERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFTEQGVR
Ga0207696_12009622	3300025711	Switchgrass Rhizosphere	EAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR
Ga0207692_101082731	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR
Ga0207710_100564794	3300025900	Switchgrass Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR
Ga0207699_104287512	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSWTGCEGFDKPRYIWGVGFGWRPSAILICPRPKEVVAMVGKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR
Ga0207693_102011314	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLGKKAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRLTLVLAGFILLV
Ga0207662_101520372	3300025918	Switchgrass Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR
Ga0207657_101914444	3300025919	Corn Rhizosphere	MLGKKAKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFAEQGVR
Ga0207694_107530381	3300025924	Corn Rhizosphere	VAKRNWRMVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFAEQGVR
Ga0207659_112694272	3300025926	Miscanthus Rhizosphere	MLGKKAKAEFERDGVRAVREHVEQGSYWEGKKQQAIKWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR
Ga0207664_106108622	3300025929	Agricultural Soil	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFAEQGVR
Ga0207644_107477941	3300025931	Switchgrass Rhizosphere	MVGARTKAEFEQEGAEAVREHVEKGDYWEGKKQLAIKWLNQQDPQWKRDRDIKALLKAARRTARDTRLTLVLAGFILLVLIAIAIRV
Ga0207686_113595091	3300025934	Miscanthus Rhizosphere	MLGKKAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVTRFFTGQGVR
Ga0207669_102335401	3300025937	Miscanthus Rhizosphere	KADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR
Ga0207704_105912321	3300025938	Miscanthus Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR
Ga0207665_101509444	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR
Ga0207711_102088912	3300025941	Switchgrass Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR
Ga0207689_105247412	3300025942	Miscanthus Rhizosphere	MLGKKAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR
Ga0207667_106984551	3300025949	Corn Rhizosphere	MLGKKAKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR
Ga0207668_113064241	3300025972	Switchgrass Rhizosphere	MLGKKAKADFERAGVRAVREHVEQGSYWEGKKQQAIKWLAEQSERKKSRNTKALLTLARRTARDARLTLVLAGFILLVLIAELVARFFAEQGVR
Ga0207640_100600744	3300025981	Corn Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSARKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR
Ga0207677_117307842	3300026023	Miscanthus Rhizosphere	MVGARTKAEFEQEGAEAVREHVEKGDYWEGKKQLAIKWLNQQDPQWKRDRDIKALLKAARRTARDTRLTLVLAGFILLVLIAIAIRVFLR
Ga0207703_109817571	3300026035	Switchgrass Rhizosphere	GKRAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR
Ga0207708_104875442	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR
Ga0207702_122349092	3300026078	Corn Rhizosphere	RMVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFTEQGVR
Ga0207641_107490992	3300026088	Switchgrass Rhizosphere	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRLTLVLAGFILLVLIAELVARFFAEQGVR
Ga0207648_117184322	3300026089	Miscanthus Rhizosphere	GRMVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR
Ga0207676_103542225	3300026095	Switchgrass Rhizosphere	ERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR
Ga0207674_103874481	3300026116	Corn Rhizosphere	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARF
Ga0207674_112198753	3300026116	Corn Rhizosphere	MLGKKAKAEFERDGVRAVREHVEQGSYWEGKKQQAIKWLAEQSERKKSRNTKALLTLARRTARDARLTLVLAGFILLVLIAELVARFFAEQGV
Ga0207444_10073081	3300026900	Soil	RDIHDNIAKGGRMVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVARFFAEQGVR
Ga0209974_102674291	3300027876	Arabidopsis Thaliana Rhizosphere	MVGKRTRADFERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLTLVLVGFILLVLIAELVARFFTGQGVR
Ga0207428_104637843	3300027907	Populus Rhizosphere	MVGKRTKADFERAGVEAVRRQVKQGDYWEGEKQQAIEWLAEESERKKSRDTKKLLTLARRTARDTRLTLVLVGFILLVLIAELVARFFTGQGVR
Ga0310892_107269751	3300031858	Soil	MVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIKWLAEQSARKKSRDSKNLLTLARRTARDTRRTLVLVGFILLVLIAELVA
Ga0310906_110462001	3300032013	Soil	RGGRMVSKRTKADFERAGVEAVREQVKQGDYWEGEKQQAIAWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFFAEQGVR
Ga0310896_107448181	3300032211	Soil	MVGKRAKADFERAGVEAVREQVKQGDYWEGEKQQAITWLAEQSERKKSRDSKNLLTLARRTARDTRLTLLLAGFILLVLIAELVARFF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066162

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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