Metagenome / Metatranscriptome Family F066198

Basic Information
Family ID	F066198
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	57 residues
Representative Sequence	MPDDEIDLLRSVLARAYEKPQPFPLRLVEAVQDYIGTRTRRKPIIESLNISEKKDAA
Number of Associated Samples	95
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	51.18 %
% of genes near scaffold ends (potentially truncated)	35.43 %
% of genes from short scaffolds (< 2000 bps)	86.61 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Unclassified (57.480 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.283 % of family members)
Environment Ontology (ENVO)	Unclassified (44.882 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.843 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.35% β-sheet: 0.00% Coil/Unstructured: 57.65%
Feature Viewer

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Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00072	Response_reg	8.66
PF01068	DNA_ligase_A_M	6.30
PF00248	Aldo_ket_red	1.57
PF00583	Acetyltransf_1	1.57
PF07704	PSK_trans_fac	1.57
PF03576	Peptidase_S58	1.57
PF13620	CarboxypepD_reg	0.79
PF00873	ACR_tran	0.79
PF04366	Ysc84	0.79
PF04972	BON	0.79
PF08281	Sigma70_r4_2	0.79
PF01596	Methyltransf_3	0.79
PF05598	DUF772	0.79
PF00155	Aminotran_1_2	0.79
PF12244	DUF3606	0.79
PF06719	AraC_N	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	6.30
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	6.30
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	3.15
COG4423	Uncharacterized conserved protein	Function unknown [S]	1.57
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.79
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.79
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.79
COG4977	Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain	Transcription [K]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.48 %
All Organisms	root	All Organisms	42.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.48 %
cellular organisms	root	All Organisms → cellular organisms	42.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	31.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	21.26 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.26 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.26 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.26 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.26 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100217151	Not Available	512	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105683472	Not Available	1132	Open in IMG/M
3300001471\|JGI12712J15308_10146564	Not Available	609	Open in IMG/M
3300002245\|JGIcombinedJ26739_100032457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4639	Open in IMG/M
3300002245\|JGIcombinedJ26739_100851680	Not Available	793	Open in IMG/M
3300004479\|Ga0062595_100517650	Not Available	902	Open in IMG/M
3300004479\|Ga0062595_101076318	Not Available	700	Open in IMG/M
3300004479\|Ga0062595_101269923	Not Available	660	Open in IMG/M
3300005175\|Ga0066673_10547067	Not Available	678	Open in IMG/M
3300005355\|Ga0070671_101406582	Not Available	616	Open in IMG/M
3300005434\|Ga0070709_10229280	Not Available	1328	Open in IMG/M
3300005434\|Ga0070709_11310138	Not Available	584	Open in IMG/M
3300005436\|Ga0070713_101249210	Not Available	719	Open in IMG/M
3300005439\|Ga0070711_101017668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300005440\|Ga0070705_101552411	Not Available	556	Open in IMG/M
3300005445\|Ga0070708_100003643	All Organisms → cellular organisms → Bacteria	12080	Open in IMG/M
3300005445\|Ga0070708_100017736	All Organisms → cellular organisms → Bacteria	5944	Open in IMG/M
3300005538\|Ga0070731_10092916	Not Available	1998	Open in IMG/M
3300005539\|Ga0068853_101815072	Not Available	591	Open in IMG/M
3300005546\|Ga0070696_100633672	All Organisms → cellular organisms → Bacteria → Acidobacteria	865	Open in IMG/M
3300006032\|Ga0066696_10708427	Not Available	646	Open in IMG/M
3300006163\|Ga0070715_10108472	Not Available	1306	Open in IMG/M
3300006163\|Ga0070715_10289239	All Organisms → cellular organisms → Bacteria → Acidobacteria	872	Open in IMG/M
3300006173\|Ga0070716_100584244	Not Available	838	Open in IMG/M
3300006173\|Ga0070716_100674733	Not Available	786	Open in IMG/M
3300006175\|Ga0070712_101798794	Not Available	536	Open in IMG/M
3300006237\|Ga0097621_100974265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300006797\|Ga0066659_11456194	Not Available	573	Open in IMG/M
3300006806\|Ga0079220_11592349	Not Available	565	Open in IMG/M
3300006854\|Ga0075425_101792862	Not Available	689	Open in IMG/M
3300006854\|Ga0075425_102745019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300007076\|Ga0075435_101003760	Not Available	729	Open in IMG/M
3300007265\|Ga0099794_10330196	Not Available	792	Open in IMG/M
3300007265\|Ga0099794_10441920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300009038\|Ga0099829_10163686	Not Available	1783	Open in IMG/M
3300009038\|Ga0099829_10633321	Not Available	889	Open in IMG/M
3300009038\|Ga0099829_10646629	Not Available	879	Open in IMG/M
3300009088\|Ga0099830_10344271	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300009088\|Ga0099830_10554951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300009089\|Ga0099828_10320718	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300009090\|Ga0099827_10454316	Not Available	1098	Open in IMG/M
3300009092\|Ga0105250_10195869	Not Available	851	Open in IMG/M
3300009093\|Ga0105240_11881321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300009093\|Ga0105240_12556064	Not Available	528	Open in IMG/M
3300009101\|Ga0105247_11796583	Not Available	510	Open in IMG/M
3300009137\|Ga0066709_101717419	All Organisms → cellular organisms → Bacteria → Acidobacteria	889	Open in IMG/M
3300009177\|Ga0105248_12869159	Not Available	550	Open in IMG/M
3300010304\|Ga0134088_10389979	Not Available	678	Open in IMG/M
3300010375\|Ga0105239_12436782	Not Available	610	Open in IMG/M
3300010396\|Ga0134126_12140096	Not Available	611	Open in IMG/M
3300010397\|Ga0134124_10117446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2337	Open in IMG/M
3300010397\|Ga0134124_12308284	Not Available	579	Open in IMG/M
3300010401\|Ga0134121_10059324	All Organisms → cellular organisms → Bacteria	3151	Open in IMG/M
3300011269\|Ga0137392_10386831	Not Available	1160	Open in IMG/M
3300011271\|Ga0137393_10032018	All Organisms → cellular organisms → Bacteria	3986	Open in IMG/M
3300012096\|Ga0137389_10104599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2256	Open in IMG/M
3300012189\|Ga0137388_10059986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3125	Open in IMG/M
3300012200\|Ga0137382_10603181	Not Available	784	Open in IMG/M
3300012203\|Ga0137399_10263820	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300012205\|Ga0137362_10589174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300012361\|Ga0137360_11721024	Not Available	532	Open in IMG/M
3300012362\|Ga0137361_10059824	All Organisms → cellular organisms → Bacteria	3181	Open in IMG/M
3300012363\|Ga0137390_10169865	Not Available	2168	Open in IMG/M
3300012363\|Ga0137390_10762077	Not Available	927	Open in IMG/M
3300012582\|Ga0137358_10014083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5043	Open in IMG/M
3300012683\|Ga0137398_10751220	Not Available	680	Open in IMG/M
3300012917\|Ga0137395_10258488	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300012923\|Ga0137359_10424888	Not Available	1177	Open in IMG/M
3300012923\|Ga0137359_10839788	Not Available	794	Open in IMG/M
3300012929\|Ga0137404_12072998	Not Available	531	Open in IMG/M
3300012930\|Ga0137407_10206939	Not Available	1763	Open in IMG/M
3300012930\|Ga0137407_10698371	All Organisms → cellular organisms → Bacteria → Acidobacteria	955	Open in IMG/M
3300012930\|Ga0137407_11329993	Not Available	683	Open in IMG/M
3300012930\|Ga0137407_12127137	Not Available	536	Open in IMG/M
3300012957\|Ga0164303_10042649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1957	Open in IMG/M
3300012961\|Ga0164302_10763661	Not Available	725	Open in IMG/M
3300012984\|Ga0164309_10454620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300012984\|Ga0164309_11276468	Not Available	620	Open in IMG/M
3300012987\|Ga0164307_11447396	Not Available	580	Open in IMG/M
3300013296\|Ga0157374_10158325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2205	Open in IMG/M
3300013297\|Ga0157378_11600350	Not Available	697	Open in IMG/M
3300013307\|Ga0157372_11864160	Not Available	691	Open in IMG/M
3300013308\|Ga0157375_13262037	Not Available	541	Open in IMG/M
3300015241\|Ga0137418_10031433	All Organisms → cellular organisms → Bacteria	4918	Open in IMG/M
3300015264\|Ga0137403_10874496	Not Available	750	Open in IMG/M
3300015264\|Ga0137403_11566706	Not Available	511	Open in IMG/M
3300015374\|Ga0132255_102589464	Not Available	775	Open in IMG/M
3300018468\|Ga0066662_12762511	Not Available	520	Open in IMG/M
3300018482\|Ga0066669_11588474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300020579\|Ga0210407_11411831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300020583\|Ga0210401_11077928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300020583\|Ga0210401_11130555	Not Available	642	Open in IMG/M
3300021046\|Ga0215015_10277289	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300021086\|Ga0179596_10272740	Not Available	839	Open in IMG/M
3300021086\|Ga0179596_10640715	Not Available	539	Open in IMG/M
3300021178\|Ga0210408_11130623	Not Available	601	Open in IMG/M
3300021420\|Ga0210394_11588407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300021432\|Ga0210384_10443563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300021432\|Ga0210384_11314824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300021559\|Ga0210409_10197297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1834	Open in IMG/M
3300024330\|Ga0137417_1308125	Not Available	891	Open in IMG/M
3300025906\|Ga0207699_10302207	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300025906\|Ga0207699_10553360	All Organisms → cellular organisms → Bacteria → Acidobacteria	835	Open in IMG/M
3300025910\|Ga0207684_10855784	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300025910\|Ga0207684_11702571	Not Available	508	Open in IMG/M
3300025939\|Ga0207665_10226493	All Organisms → cellular organisms → Bacteria → Acidobacteria	1372	Open in IMG/M
3300026499\|Ga0257181_1091816	Not Available	532	Open in IMG/M
3300026555\|Ga0179593_1162055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2463	Open in IMG/M
3300027727\|Ga0209328_10174118	Not Available	652	Open in IMG/M
3300027846\|Ga0209180_10279297	Not Available	959	Open in IMG/M
3300027846\|Ga0209180_10318699	Not Available	889	Open in IMG/M
3300027862\|Ga0209701_10231183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300027908\|Ga0209006_10060423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3390	Open in IMG/M
3300028047\|Ga0209526_10541343	Not Available	753	Open in IMG/M
3300028536\|Ga0137415_10017319	All Organisms → cellular organisms → Bacteria → Acidobacteria	7145	Open in IMG/M
3300030991\|Ga0073994_11672140	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300031716\|Ga0310813_10324996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1304	Open in IMG/M
3300031720\|Ga0307469_10147893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1753	Open in IMG/M
3300031720\|Ga0307469_11922455	Not Available	573	Open in IMG/M
3300031754\|Ga0307475_11221289	Not Available	585	Open in IMG/M
3300031962\|Ga0307479_10533795	Not Available	1156	Open in IMG/M
3300032180\|Ga0307471_100034897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3938	Open in IMG/M
3300032180\|Ga0307471_100323811	All Organisms → cellular organisms → Bacteria → Acidobacteria	1640	Open in IMG/M
3300032180\|Ga0307471_100705975	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300032180\|Ga0307471_101280982	All Organisms → cellular organisms → Bacteria → Acidobacteria	896	Open in IMG/M
3300032205\|Ga0307472_101780965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	611	Open in IMG/M
3300033412\|Ga0310810_10917784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.61%
Host-Associated	Host-Associated	13.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.61%
Plants	Host-Associated → Plants	13.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.57%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.93%
Loam	Environmental → Terrestrial → Soil → Loam	19.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.15%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1002171512	3300000364	Soil	VPDEEIDLLRSVLTRAYEKRQPFLLRLVXAVKDXFXSDTTRKPVIQSLNIDKKTDTA*
INPhiseqgaiiFebDRAFT_1056834723	3300000364	Soil	HDEVDLLRSVLARAYEXPSPFPLRLVEAVQDYIGTRTPRKPIIESLNINEKKDAA*
JGI12712J15308_101465641	3300001471	Forest Soil	MPDDQIDLLRSVLARAYEKPSPFHLRLIEAVQEYIGTRTRRKPIIESLNINEKKDAA*
JGIcombinedJ26739_1000324575	3300002245	Forest Soil	MPDDDQIEVLRSVLAHAYEKRQPFLLRLVQAVKDNVGTRTPRKPIIESLNIFEKDKDLA*
JGIcombinedJ26739_1008516802	3300002245	Forest Soil	MTDDEKLERLRSVLARAYEKRQPFLLRLVQAVKDYVGPRTFRKPIIESLNIIEKNKNVA*
Ga0062595_1005176502	3300004479	Soil	VPDEEIDLLRSVLTRAYEKRQPFLLRLVLAVKDRFGSDTTRKPFIQS
Ga0062595_1010763181	3300004479	Soil	VPNEELDLLRSVLARPYEKRQPFLMRLVQAVKDYVGLRTPRKPVIESLNIMEKKKDAA*
Ga0062595_1012699232	3300004479	Soil	MPHDEVDLLRSVLARAHEKPSPFPLRLVEAVQDYIGTRTPRKPIIES
Ga0066673_105470671	3300005175	Soil	MRGDDQIELLRSVLAQAHENRKLFPFRLVKVLQDYIGLGTPRKPIIESLNIIEKNKDVA*
Ga0070671_1014065821	3300005355	Switchgrass Rhizosphere	MPHDEVDLFRSVLARAYEKPSPFPLRLVEAVQDYVGTRTPKKPLIQSLNITEKRDAA*
Ga0070709_102292803	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VIRTVLGVNSMPDDEVELLRTVLAHAYEKPLPLPLSLVEAVKDYIGTRAPKKPVIESLYINEKKDAA*
Ga0070709_113101382	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTDDQIDLLRSVLARAYEKPLPFPLRLVQAVMDYIGTRTPRKHMIESLNITEREGAA*
Ga0070713_1012492101	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VLGVNSMPDDEVELLRTVLAHAYEKPLPLPLRLVEAVKDYIGTRAPKKPVIESLYINEKKDAA*
Ga0070711_1010176681	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VPDEEIDLLRSVLTRAYEKRQPFLLRLVLAVKDRFGSDTTRKPVIQSLNIDKKKDAA*
Ga0070705_1015524111	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPHDEIQLLRSVLARAYDEAFAFPLEVVEAVPDYIGTRTPRKPIIESLNLSEKKDAA*
Ga0070708_1000036431	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RAYEKRQPFLLRLVQAVKDHVGPSTPRKPVIESLNISLNIMEKKKDAA*
Ga0070708_1000177363	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSDDQIEHLRSVLARAYEKRQPFPFRLVHALKDYIVPRTPRKPIIETLNITGKNKDAA*
Ga0070731_100929162	3300005538	Surface Soil	MPDDQIDLLRPVLARAYEKPQPFPLRLVQAVKDYIDTRTPKRPIIQSLNISDKKDAA*
Ga0068853_1018150721	3300005539	Corn Rhizosphere	FRSVLARAYEKPSPFPLRLVEAVQDYVGTRTPKKPLIQSLNSTEKRDAA*
Ga0070696_1006336721	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSHDEVDLLRSVLARAYEKPSPFTLRLIEAVQDYIGTRTPRKPIIESLNINEKKDAA*
Ga0066696_107084272	3300006032	Soil	MRGDDQIELLRSVLAQAHENRKLFPFRLVKVLQDYIGLGTPRKPIIESLNII
Ga0070715_101084721	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	AYEKPSPFPLRLVEAVQDYVGTRTPKKPLIQSLNITEKRDAA*
Ga0070715_102892393	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPHDEVDLLRSVLARAYEKPSPFPLRLVEAVQDYIGTRTPRKPISESLNINEKKDAA*
Ga0070716_1005842441	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DDQIDLLRTALARACEKRQPLHLRLIQAAKDCIDPRTPRKPIIQSLGIIEKNKDVA*
Ga0070716_1006747332	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPHDEVDLFRSVLARAYEKPSPFPLRLVEAVQDYIGTRTPRKPISESLNINEKKDAA*
Ga0070712_1017987942	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPHDEVDLFRSVLARAYEKPSPFPLRLVEAVQDYIGTRAPRKPIIESLNISEKKDAA*
Ga0097621_1009742651	3300006237	Miscanthus Rhizosphere	EFAVRDDEIDLLRSVLARACEKRQPFILRLVQSVKNRFGSETARKPVIQSLNIDKKKDAA
Ga0066659_114561941	3300006797	Soil	VPDEEIDLLRSVLARAYEKRQPFLIRLVQAVKDYVGPRTPRKPVIESLNIMEKKKDAA*
Ga0079220_115923491	3300006806	Agricultural Soil	MPYDEVDLLRSVLARACEKPSPFPLRLVEAVKDYIGTRTPRKPIIETLNISEKKDAA*
Ga0075425_1017928622	3300006854	Populus Rhizosphere	SMPHDEVELLRSVLARAYEKPSPLPLRLVEAVQDYIGTRTPKEPIIQSLNIGEKKDAA*
Ga0075425_1027450192	3300006854	Populus Rhizosphere	VRLAYSMPHDEIDLLRSVLALAYEKPSPFPLRLVEAVKDYIGTRSPRKPIIESLNIIEEKDASEEKHAA*
Ga0075435_1010037603	3300007076	Populus Rhizosphere	MPHDEVDLLRSVLALAYEKPSPFPLRLVEAVQDYIGTRSPRKPTIESLNISEKKDAA*
Ga0099794_103301961	3300007265	Vadose Zone Soil	VSDDQIEHLRSVLARAYEKRQPFPFRLVHAMKDYIVPRTPRKPIIETLNSTGKNKDAA*
Ga0099794_104419201	3300007265	Vadose Zone Soil	EIDLLRSVLARAYEKPSPFPLRLVEAVKDYIGTRTLRKPIIEGLNISEKKDAA*
Ga0099829_101636861	3300009038	Vadose Zone Soil	MADDQIDLLRTALTRAYEKRQPLHLRLIQAVKDCIGPRSPRKPIIQSLGITEKNKDAA*
Ga0099829_106333212	3300009038	Vadose Zone Soil	MADDQIDLLRTALALAYEKRQPLHLRLIQAAKDCLDPRAPRKPIIQSLGIFERKKDAA*
Ga0099829_106466291	3300009038	Vadose Zone Soil	MPDDDQIELLRSVLARAYEKRQPFLMRLVQAVKDYVGPRTPRKPIIESLNIIERKTDTA*
Ga0099830_103442712	3300009088	Vadose Zone Soil	VSDDRIEHLRSVLARAYEKRQPFPFRLVHAMKDYIVPRTPRKPIIETLNSTGKNKDAA*
Ga0099830_105549512	3300009088	Vadose Zone Soil	MADDQIELLRTALTRAYEKRQPLHLRLIQAVKDCIGPRSPRKPIIQSLGIIEKNKDAA*
Ga0099828_103207183	3300009089	Vadose Zone Soil	MADDQIDLLRTALTRAYEKRQPPNLRLIQAVKDCIGPRKPIIQSLGIIEKNKDAA*
Ga0099827_104543162	3300009090	Vadose Zone Soil	VSDDQIEHLRSVLARAYEKRQPFPFRLVHAVKDYIVPRTPRKPIIETLNITGKNKDAA*
Ga0105250_101958692	3300009092	Switchgrass Rhizosphere	SVLARAYEKPSPFLLRLVEAVQDYIGTRVPKKPTIQSLNISEKKDAA*
Ga0105240_118813211	3300009093	Corn Rhizosphere	FAVRDEEIDLLRSVLARACEKRQPFLLRLVQSVKNRFGSETARKPVIQSLNIDKKKDAA*
Ga0105240_125560641	3300009093	Corn Rhizosphere	LARAYEKPSPFPLRLVEAVQDYVGTRTPKKPLIQSLNITEKRDAA*
Ga0105247_117965831	3300009101	Switchgrass Rhizosphere	MPQDEVELLRSVLAHAYEKPSPFPLRLVEAVQDYIGTRTPKKPIIQSLNIGEA*
Ga0066709_1017174191	3300009137	Grasslands Soil	VASFKMPFSEVYMADDQIELLRTALARACEKRQPLHLRLIQAAKNCIGPRTPRKPIIQSLGIIEENKDVA*
Ga0105248_128691591	3300009177	Switchgrass Rhizosphere	RAYEKPSPLPLRLVEAAQDYIGTRTPKKPIIQSLNIGEKKDVA*
Ga0134088_103899791	3300010304	Grasslands Soil	VFRRITLPDDQVDLLRSVLARAYEKRQPFLLRLLQAVMDYVSPSTPRKPVIESLNIMDKKKDAA*
Ga0105239_124367821	3300010375	Corn Rhizosphere	ARAYEKPSPFPLRLVEAVQDYVGTRTPKKPLIQSLNSTEKRDAA*
Ga0134126_121400961	3300010396	Terrestrial Soil	MPHDEVDLLRSVLARAHEKPSPFPLRLVEAVQDYIGTRTPKEPIIQSLNIGEKKDAA*
Ga0134124_101174464	3300010397	Terrestrial Soil	MPHDEVELLRSVLARAYEKPSPFLLRLVEAVQDYIGTRVPKKPTIQSLNISEKKDAA*
Ga0134124_123082841	3300010397	Terrestrial Soil	MPDDEVELLRTVLAHAYEKPLPLPLSLVEAVKDYIGTRAPKKPVIESLYINEKKDAA*
Ga0134121_100593241	3300010401	Terrestrial Soil	MPHDEVELLRSVLARAYEKPSPFPLRLVEAVQDYIGTRTPKQPIIQSLNIGEKKDVA*
Ga0137392_103868312	3300011269	Vadose Zone Soil	MADDQIDLLRTALTRAYEKRQPLHLRLIQAVKDCIGPRSPRKPIIQSLGIIEKNKDAA*
Ga0137393_100320184	3300011271	Vadose Zone Soil	VSDDQIEHLRSVLARAYEKRQPFPFRLVHAVKDYIVPRTPRKPIIETLNSTGKNKDAA*
Ga0137389_101045994	3300012096	Vadose Zone Soil	MRPVKGVQMSDDQIEQLRSVLARAYEKREPIAFRLVKAVRNCIGPRTPRRPIIESLNITEKNKDAA*
Ga0137388_100599861	3300012189	Vadose Zone Soil	MRPVKGVQMSDDQIEQLRSFLARAYEKREPIAFRLVKAVRNCIGPRTPRRPIIESLNITEKNKDAA*
Ga0137382_106031812	3300012200	Vadose Zone Soil	MGDDQIDLVRTALARAYEKRQPLHLRLIQAVKDCIGPRTPRKPIIQSLGIIEKNKDTA*
Ga0137399_102638201	3300012203	Vadose Zone Soil	VSDDHVEHLRSVLARAYEKRQPFPFRLVHAMKDYIVPRTPRKPIIETLNSTGKNKDAA*
Ga0137362_105891741	3300012205	Vadose Zone Soil	IEQLRSVLARAYEKRQPLLFRLVKAVRNCIGPCTPRRPIIESLNITEKNKDAA*
Ga0137360_117210241	3300012361	Vadose Zone Soil	MPHDEDEIDLLRSVLALAYEKPSPFPLRLVEAVQDYIGTRTPRKPIIESLNISEKKDAA*
Ga0137361_100598244	3300012362	Vadose Zone Soil	VSDDQIELLRCVLARAYEKRQPLLFRLVKGIKDYIGPRTPRRPIIESLNITEKNKDAA*
Ga0137390_101698652	3300012363	Vadose Zone Soil	MPDDDQIELLRSVLAHAYEKRQPFLLRLVQAVKDYVGPRTLRKPIIESLNIIEKNKNVA*
Ga0137390_107620771	3300012363	Vadose Zone Soil	MADDQIDLLRTALTRAYEKRQPLHLRLIQAVKDCIGPRTSRKPIIQSLGIVEKNKDAA*
Ga0137358_100140834	3300012582	Vadose Zone Soil	VSDDHIEHLRSVLARAYEKRQPFPFRLVHAMKDYIVPRTPRKPIIETLNSTGKNKDAA*
Ga0137398_107512201	3300012683	Vadose Zone Soil	QMSDDQIEQLRSFLARAYEKREPIAFRLVKAVRNCIGPRTPRRPIIESLNITEKNKDAA*
Ga0137395_102584884	3300012917	Vadose Zone Soil	MPEDDQIELLRSFLARAYEKRQPFLLRLVQAVKDYVGPRTLRKPIIESLNIIEKNKNVA*
Ga0137359_104248883	3300012923	Vadose Zone Soil	AKDVQVSDDQIELLRCVLARAYEKRQPLLFRLVKGIKDYIGPRTPRRPIIESLNITEKNKDAA*
Ga0137359_108397881	3300012923	Vadose Zone Soil	GVQVSDDHVEHLRSVLARAYEKRQPFPFRLVHAMKDYIVPRTPRKPIIETLNSTGKNKDAA*
Ga0137404_120729981	3300012929	Vadose Zone Soil	KPSPFPLRLVEAVQDYIGTRSPRKPTIETLNISEKKDAA*
Ga0137407_102069392	3300012930	Vadose Zone Soil	VSDDHVEHLRSVLARAYEKRQPFPFRLVHAVKDYIVPRTPRKPIIETLNITGKNKDAA*
Ga0137407_106983712	3300012930	Vadose Zone Soil	MPHDEVDLLRSVLALVYSKPSPFPLRLVEAVQDYIGTRSPRKPTIETLNISEKKDAA*
Ga0137407_113299931	3300012930	Vadose Zone Soil	VPGEEIDLLRSVLAHAYEKRQPFLLRLVQAVKDYVGPSTPRKPVIESLNIMDKKKDAA*
Ga0137407_121271371	3300012930	Vadose Zone Soil	KDVQVSDDQIELLRCVLARAYEKRQPLLFRLVKGIKDYIGPRTPRRPIIESLNIAEKNKDAA*
Ga0164303_100426493	3300012957	Soil	MPHDEVDLLRSVLARAYEKPSPFPLRLVEAVQDYIGTRAPRKPIIESLNISEKKDAA*
Ga0164302_107636612	3300012961	Soil	VPDEEIDLLRSVLARAYERRQPLLLRLVELVKDRFGSDNTRKPVIQSLNIDQKKDAA*
Ga0164309_104546201	3300012984	Soil	MPRDEVDLLRSVLARAYEKPSPFPLRLVEAVQDYIGTRAPRKPIFESLNISEKKDWGLERR*
Ga0164309_112764682	3300012984	Soil	DLVPDEEIDLLRSVLARAYERRQPLLLRLVELVKDRFGSDTTRKPVIQSLNIDQKKDAA*
Ga0164307_114473961	3300012987	Soil	IDLLRSVLARAYEKRQPFLLRLVQAVKDRLGSDTTRKPVIQSLNIDQKKDAA*
Ga0157374_101583253	3300013296	Miscanthus Rhizosphere	VRDEEIDLLRSVLARACEKRQPFLLRLVQSVKNRFGSETARKPVIQSLNIDKKKDAA*
Ga0157378_116003501	3300013297	Miscanthus Rhizosphere	MGVYSMPHDEVDLLRSVLARAYEKPSPFPLRLVEAIQDYVGTRPARKPIIERLKISEKKDAA*
Ga0157372_118641601	3300013307	Corn Rhizosphere	SVLARAYEKPSPFPLRLVEAVQDYVGTRTPKKPLIQSLNITEKRDAA*
Ga0157375_132620371	3300013308	Miscanthus Rhizosphere	MPHDEVDLLRSVLARAYEKPSPFPLRLVEAVQDYVGTRTLKKPIIQSLNIGEKKDA
Ga0137418_100314331	3300015241	Vadose Zone Soil	VSDDQIELLRCVLARAYEKRQPLLFRLVKGIKDYIGPRTPRRPIIESLNIVEKDKDAA*
Ga0137403_108744961	3300015264	Vadose Zone Soil	TRFSGVYMGDDQIDLLRTALARAYEKRQPLHLRLIQAVKDCIGPRTPRKPIIQSLGIIEKNKDTA*
Ga0137403_115667062	3300015264	Vadose Zone Soil	EIDLLRSVLARAYEKRQPFLLRLVQAVKDHVGPSTPRKPVIESLNIMEKKKDAA*
Ga0132255_1025894641	3300015374	Arabidopsis Rhizosphere	AYEKPSPLPLRLVEAAQDYIGTRTPKKPIIQSLNIGEKKDVA*
Ga0066662_127625111	3300018468	Grasslands Soil	VFRRITLPDDQVDLLRSVLARAYEKRQPFLLRLVQAVKNYIGPRTPRKPLIEGLNIIERKTDTA
Ga0066669_115884742	3300018482	Grasslands Soil	MRGDDQIELLRSVLAQAHENRKLFPFRLVKVLQDYIGLGTPRKPIIESLNIIEKNKDVA
Ga0210407_114118311	3300020579	Soil	PFSGVYMADHQIELLRAALARAYEKRQPLHLRLIQAVKDCIGPRTSRKPIIQSLGIVEENKDAA
Ga0210401_110779281	3300020583	Soil	MPDDQIDLLRSVLARAYEKPAPLPLRLVQALQDYIGSRTPRKPIIESLNINEKKDAA
Ga0210401_111305552	3300020583	Soil	MADHQIELLRAALARAYEKRQPLHLRLIQAVKDCIGPRTSRKPIIQSLGIVEKNKDAA
Ga0215015_102772891	3300021046	Soil	MPDDDQIEVLRSVLAHAYEKRQPFLLRLVQAVKDNVGTRTPRKPIIESLNILEKNKDLA
Ga0179596_102727401	3300021086	Vadose Zone Soil	VPDEEIDLLRSVLARAYEKRQPFLLRLVQAVKDHVGPSTPRKPVIESLNIMEKKKDAA
Ga0179596_106407152	3300021086	Vadose Zone Soil	VSDDRIEHLRSVLARAYEKRQPFPFRLVHAMKDYIVPRTPRKPIIETLNSTGKNKDAA
Ga0210408_111306232	3300021178	Soil	KCAMPDDDQIEVLRSVLAHAYEKRQPLLLRLIQAVKDNVGTRTPRKPIIESLNIFEKDKDLA
Ga0210394_115884072	3300021420	Soil	MPDDQIDLLRSVLARAYEKPSPFHLRLIEAVQDYIGSRTQRKPVIESLNINEKKDAA
Ga0210384_104435632	3300021432	Soil	MPHDEVDLLRSVLARAYEKPLPFPLRLVEAVQDYLGTHTRRKPIIESLNISEKKDAA
Ga0210384_113148242	3300021432	Soil	MPDDQIDLLRSVLARAYEKPSPFPLRLIEAVQDYIGTRTRRKPIIESLNINEKKDAA
Ga0210409_101972974	3300021559	Soil	MPDDEIDLLRSVLARAYEKPQPFPLRLVEAVQDYIGTRTRRKPIIESLNISEKKDAA
Ga0137417_13081251	3300024330	Vadose Zone Soil	VSDDQIEHLRSVLARAYEKRQPFPFRLVHAMKDYIVPRTPRKPIIETLNSTGKNKDAA
Ga0207699_103022074	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTDDQIDLLRSVLARAYEKPLPFPLRLVQAVMDYIGTRTPRKHMIESLNITEREG
Ga0207699_105533601	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VIRTVLGVNSMPDDEVELLRTVLAHAYEKPLPLPLRLVEAVKDYIGTRAPKKPVIESLYINEKKD
Ga0207684_108557841	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VPDEEIDLLRSVLARAYEKRQPFLLRLVQAVKDHVGPSTPRKPVIESLNIM
Ga0207684_117025712	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RSVLARAYEKRQPFLLRLVQAVKDHVGPSTPRKPVIESLNISLNIMEKKKDPA
Ga0207665_102264934	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPHDEVELLRSVLARAYEKPSPFPLRLVEAVQDYIGTRVPKKPTVQSLNISEKKDAA
Ga0257181_10918161	3300026499	Soil	VPDEEIDLLRSVLARAYEKRQPFLLRLVQAVKDHVGPSTPRKPVIESLNIN
Ga0179593_11620552	3300026555	Vadose Zone Soil	VPDEEIDLLRSVLARAYEKRQPFLMRLVQAVKDYVGPRTPRKAVIESLNIMEKKKDAA
Ga0209328_101741182	3300027727	Forest Soil	DEKLERLRSVLARAYEKRQPFLLRLVQAVKDYVGPRTFRKPIIESLNIIEKNKNVA
Ga0209180_102792971	3300027846	Vadose Zone Soil	MADDQIDLLRTALTRAYEKRQPLHLRLIQAVKDCIGPRSPRKPIIQSLGITEKNKDAA
Ga0209180_103186992	3300027846	Vadose Zone Soil	MADDQIDLLRTALALAYEKRQPLHLRLIQAAKDCLDPRAPRKPIIQSLGIFERKKDAA
Ga0209701_102311831	3300027862	Vadose Zone Soil	MADDQIELLRTALTRAYEKRQPLHLRLIQAVKDCIGPRSPRKPIIQSLGIIEKNKDAA
Ga0209006_100604235	3300027908	Forest Soil	MPDDQIDLLRSVLARAYEKPSPFHLRLIEAVQEYIGTRTRRKPIIESLNINEKKDAA
Ga0209526_105413431	3300028047	Forest Soil	LAASNDSSKCMMPGDDQIGLLRSVLARAYEKRQPFPFRLVKAVKDYIAPRTTRSLNIIERNKDAA
Ga0137415_100173194	3300028536	Vadose Zone Soil	VSDDQIELLRCVLARAYEKRQPLLFRLVKGIKDYIGPRTPRRPIIESLNITEKNKDAA
Ga0073994_116721402	3300030991	Soil	MTDDEKLELLRSVLARAYEKRQPFLLRLVQAVKDYVGPRTFRKPIIESLDIIEKNKNVA
Ga0310813_103249962	3300031716	Soil	MPQDEVELLRSVLAHAYEKPSPFPLRLVEAVQDYIGTRTPKKPIIQSLNISEKKNAA
Ga0307469_101478933	3300031720	Hardwood Forest Soil	MPHDEVDLLRSVLARAHEKPSPFPLRLVEAVQDYIGTRTPKEPIIQSLNIGEKKDAA
Ga0307469_119224551	3300031720	Hardwood Forest Soil	MSHDEVDLLRSVLARAYEKPSPFTLRLIEAVQDYIGTRTPRKPIIESLNINEKKD
Ga0307475_112212892	3300031754	Hardwood Forest Soil	MADHQIDLLRTALARAYEKRQPLHLRLIQAIKDCIGPRTSRKPIIQSLGIVEKNKDAA
Ga0307479_105337953	3300031962	Hardwood Forest Soil	MPDEQIDLLRSVLARAYEEPLPFHLRLVQAVKDYIGTRTPRKPIIESLNITERKDAA
Ga0307471_1000348973	3300032180	Hardwood Forest Soil	MADDQIDLLRTALTRAYEKRQPLHLRLIQAVKDCFGPRGPRKPIIQSLGIIEKHKDAA
Ga0307471_1003238114	3300032180	Hardwood Forest Soil	MADHQIDLLRTALARAYEKRQPLHLRLIQAIKDCIGPRTSRKPMIQSLGIVEKNKDAA
Ga0307471_1007059753	3300032180	Hardwood Forest Soil	LLRSVLARAYEEPLPFHLRLVQAVMDYIGTRTPRKPIIESLNITERKDAA
Ga0307471_1012809823	3300032180	Hardwood Forest Soil	MPHDEVDLLRSVLARAYEKPSPFPLRLVEAVQDYIGTRTPRKPIIERLNTSEKKDAA
Ga0307472_1017809651	3300032205	Hardwood Forest Soil	IKNKLELRFGVYSMPHDEVDLLRSVLARAYEKPSPFPLRLVEAVQDYIGTRTPRKPIIERLNTSEKKDAA
Ga0310810_109177842	3300033412	Soil	GWCTMPQDEVELLRSVLAHAYEKPSPFPLRLVEAVQDYIGTRTPKKPIIQSLNISEKKNA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066198

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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