Metagenome / Metatranscriptome Family F066242

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066242
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	66 residues
Representative Sequence	MIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA
Number of Associated Samples	90
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	55.12 %
% of genes near scaffold ends (potentially truncated)	44.88 %
% of genes from short scaffolds (< 2000 bps)	82.68 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.055 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.709 % of family members)
Environment Ontology (ENVO)	Unclassified (44.094 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.055 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.81% β-sheet: 0.00% Coil/Unstructured: 76.19%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF04392	ABC_sub_bind	3.94
PF03401	TctC	2.36
PF00756	Esterase	0.79
PF00881	Nitroreductase	0.79
PF00239	Resolvase	0.79
PF13458	Peripla_BP_6	0.79
PF11994	DUF3489	0.79
PF06411	HdeA	0.79
PF00144	Beta-lactamase	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.94
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.36
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.79
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.79
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.79
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.06 %
All Organisms	root	All Organisms	40.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.06 %
cellular organisms	root	All Organisms → cellular organisms	40.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.06 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.22 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.06 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.07 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.06 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	15.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.06 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.75 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.06 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.75 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.06 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.75 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.06 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.75 %
Nocardia yamanashiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia yamanashiensis	0.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y02HPB5D	Not Available	729	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1029731	Not Available	858	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1040851	Not Available	718	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1052204	Not Available	628	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1076229	Not Available	508	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10008259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2868	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10081673	Not Available	809	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10148760	Not Available	564	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1007128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1489	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10066855	Not Available	781	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10091021	Not Available	647	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10127616	Not Available	531	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10128012	Not Available	530	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1006102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1253	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1035373	Not Available	526	Open in IMG/M
3300001431\|F14TB_107431535	Not Available	576	Open in IMG/M
3300001545\|JGI12630J15595_10095070	Not Available	586	Open in IMG/M
3300002906\|JGI25614J43888_10166891	Not Available	592	Open in IMG/M
3300002914\|JGI25617J43924_10006006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3733	Open in IMG/M
3300002917\|JGI25616J43925_10012025	All Organisms → cellular organisms → Bacteria → Proteobacteria	3806	Open in IMG/M
3300004267\|Ga0066396_10121787	Not Available	501	Open in IMG/M
3300004633\|Ga0066395_10276038	Not Available	910	Open in IMG/M
3300005332\|Ga0066388_100428292	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300005332\|Ga0066388_101643142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1133	Open in IMG/M
3300005332\|Ga0066388_103192817	Not Available	837	Open in IMG/M
3300005332\|Ga0066388_104035473	Not Available	749	Open in IMG/M
3300005332\|Ga0066388_104830660	Not Available	685	Open in IMG/M
3300005363\|Ga0008090_10081023	Not Available	768	Open in IMG/M
3300005363\|Ga0008090_10093011	Not Available	523	Open in IMG/M
3300005363\|Ga0008090_10101925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	725	Open in IMG/M
3300005363\|Ga0008090_10126786	Not Available	676	Open in IMG/M
3300005363\|Ga0008090_10134928	Not Available	515	Open in IMG/M
3300005434\|Ga0070709_10786122	Not Available	746	Open in IMG/M
3300005445\|Ga0070708_102068857	Not Available	527	Open in IMG/M
3300005467\|Ga0070706_100808642	Not Available	868	Open in IMG/M
3300005468\|Ga0070707_100234614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1785	Open in IMG/M
3300005546\|Ga0070696_101406577	Not Available	595	Open in IMG/M
3300005559\|Ga0066700_10740961	Not Available	669	Open in IMG/M
3300005764\|Ga0066903_100405882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2245	Open in IMG/M
3300005764\|Ga0066903_103876010	All Organisms → cellular organisms → Bacteria → Proteobacteria	803	Open in IMG/M
3300005764\|Ga0066903_104201183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia yamanashiensis	771	Open in IMG/M
3300005764\|Ga0066903_107415445	Not Available	566	Open in IMG/M
3300005764\|Ga0066903_107699395	Not Available	554	Open in IMG/M
3300006046\|Ga0066652_101745495	Not Available	565	Open in IMG/M
3300006844\|Ga0075428_100090254	Not Available	3342	Open in IMG/M
3300006903\|Ga0075426_10863469	Not Available	682	Open in IMG/M
3300010046\|Ga0126384_11623296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	609	Open in IMG/M
3300010048\|Ga0126373_10966499	Not Available	917	Open in IMG/M
3300010048\|Ga0126373_11471659	Not Available	746	Open in IMG/M
3300010359\|Ga0126376_10091201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2295	Open in IMG/M
3300010360\|Ga0126372_10042246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2999	Open in IMG/M
3300010360\|Ga0126372_12567635	Not Available	561	Open in IMG/M
3300010361\|Ga0126378_10850256	Not Available	1020	Open in IMG/M
3300010376\|Ga0126381_104730567	Not Available	524	Open in IMG/M
3300010396\|Ga0134126_11200381	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300010863\|Ga0124850_1000256	All Organisms → cellular organisms → Bacteria → Proteobacteria	9970	Open in IMG/M
3300012203\|Ga0137399_11309261	Not Available	609	Open in IMG/M
3300012208\|Ga0137376_10061207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3105	Open in IMG/M
3300012923\|Ga0137359_10059450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3331	Open in IMG/M
3300012948\|Ga0126375_11633788	Not Available	556	Open in IMG/M
3300012948\|Ga0126375_12010322	Not Available	511	Open in IMG/M
3300012958\|Ga0164299_10855540	Not Available	655	Open in IMG/M
3300016270\|Ga0182036_11315793	Not Available	603	Open in IMG/M
3300016294\|Ga0182041_10986611	Not Available	761	Open in IMG/M
3300016294\|Ga0182041_11647240	Not Available	593	Open in IMG/M
3300016319\|Ga0182033_10685109	All Organisms → cellular organisms → Bacteria → Proteobacteria	896	Open in IMG/M
3300016371\|Ga0182034_11721374	Not Available	552	Open in IMG/M
3300016387\|Ga0182040_10277821	Not Available	1271	Open in IMG/M
3300016387\|Ga0182040_11496329	Not Available	573	Open in IMG/M
3300016404\|Ga0182037_10318883	Not Available	1256	Open in IMG/M
3300016445\|Ga0182038_11155232	Not Available	689	Open in IMG/M
3300018468\|Ga0066662_10481340	Not Available	1123	Open in IMG/M
3300024347\|Ga0179591_1015406	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300026557\|Ga0179587_10888141	Not Available	588	Open in IMG/M
3300027646\|Ga0209466_1004343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2962	Open in IMG/M
3300027654\|Ga0209799_1006066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2516	Open in IMG/M
3300027874\|Ga0209465_10219480	Not Available	949	Open in IMG/M
3300027874\|Ga0209465_10634953	Not Available	527	Open in IMG/M
3300028047\|Ga0209526_10127812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1785	Open in IMG/M
3300031543\|Ga0318516_10041201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2483	Open in IMG/M
3300031543\|Ga0318516_10142709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1373	Open in IMG/M
3300031544\|Ga0318534_10026646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3120	Open in IMG/M
3300031544\|Ga0318534_10116814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1532	Open in IMG/M
3300031546\|Ga0318538_10157980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1201	Open in IMG/M
3300031561\|Ga0318528_10091996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1583	Open in IMG/M
3300031640\|Ga0318555_10052049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2080	Open in IMG/M
3300031668\|Ga0318542_10121807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1276	Open in IMG/M
3300031681\|Ga0318572_10816639	Not Available	554	Open in IMG/M
3300031719\|Ga0306917_10117885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1930	Open in IMG/M
3300031719\|Ga0306917_10254050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1347	Open in IMG/M
3300031723\|Ga0318493_10898103	Not Available	502	Open in IMG/M
3300031736\|Ga0318501_10767609	Not Available	533	Open in IMG/M
3300031744\|Ga0306918_10102408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2041	Open in IMG/M
3300031747\|Ga0318502_10025129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2941	Open in IMG/M
3300031763\|Ga0318537_10159825	Not Available	839	Open in IMG/M
3300031765\|Ga0318554_10055312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2178	Open in IMG/M
3300031768\|Ga0318509_10642118	Not Available	590	Open in IMG/M
3300031792\|Ga0318529_10112502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1235	Open in IMG/M
3300031794\|Ga0318503_10026165	Not Available	1681	Open in IMG/M
3300031795\|Ga0318557_10055039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1683	Open in IMG/M
3300031797\|Ga0318550_10462019	Not Available	613	Open in IMG/M
3300031798\|Ga0318523_10011275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3643	Open in IMG/M
3300031798\|Ga0318523_10138404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1207	Open in IMG/M
3300031799\|Ga0318565_10591305	Not Available	534	Open in IMG/M
3300031835\|Ga0318517_10102187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1259	Open in IMG/M
3300031880\|Ga0318544_10070421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1290	Open in IMG/M
3300031897\|Ga0318520_10031003	All Organisms → cellular organisms → Bacteria	2671	Open in IMG/M
3300031897\|Ga0318520_10134264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1421	Open in IMG/M
3300031897\|Ga0318520_10362964	Not Available	880	Open in IMG/M
3300031897\|Ga0318520_11109900	Not Available	501	Open in IMG/M
3300031910\|Ga0306923_10334163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1729	Open in IMG/M
3300031910\|Ga0306923_10863772	Not Available	994	Open in IMG/M
3300031954\|Ga0306926_10994761	Not Available	998	Open in IMG/M
3300032001\|Ga0306922_10045740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4513	Open in IMG/M
3300032008\|Ga0318562_10194985	Not Available	1173	Open in IMG/M
3300032009\|Ga0318563_10168776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1177	Open in IMG/M
3300032035\|Ga0310911_10887511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300032054\|Ga0318570_10568000	Not Available	517	Open in IMG/M
3300032059\|Ga0318533_10006234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6918	Open in IMG/M
3300032064\|Ga0318510_10126073	Not Available	995	Open in IMG/M
3300032089\|Ga0318525_10548894	Not Available	591	Open in IMG/M
3300032089\|Ga0318525_10686662	Not Available	521	Open in IMG/M
3300032094\|Ga0318540_10199588	Not Available	964	Open in IMG/M
3300032180\|Ga0307471_100371223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1549	Open in IMG/M
3300032261\|Ga0306920_103185859	Not Available	614	Open in IMG/M
3300033289\|Ga0310914_10451588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1163	Open in IMG/M
3300033289\|Ga0310914_11133373	Not Available	683	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.64%
Host-Associated	Host-Associated	1.57%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.64%
Plants	Host-Associated → Plants	1.57%
Solid Waste	Engineered → Solid Waste	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.57%
Grass	Engineered → Solid Waste → Grass	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.95%
Loam	Environmental → Terrestrial → Soil → Loam	19.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.57%
Composting	Engineered → Solid Waste → Grass → Composting	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.72%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	3.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	11.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.15%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.94%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_03607090	2170459021	Switchgrass, Maize And Mischanthus Litter	MIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGRETRPVGVTTEPGTKRPILKLSTA
AF_2010_repII_A01DRAFT_10297312	3300000580	Forest Soil	MIKWNDAVFDSADEDLMGRINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKKPILKLSTA*
AF_2010_repII_A01DRAFT_10408512	3300000580	Forest Soil	MIKWNEAVFDRADEDLMVQINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKRPILKLSTA*
AF_2010_repII_A01DRAFT_10522042	3300000580	Forest Soil	MIKWNEAVSDGADEDLRVRINREQDDEFCQKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA*
AF_2010_repII_A01DRAFT_10762291	3300000580	Forest Soil	MLKWNEAVSDRADEDLMVRQDDEFCRKLRAALRAGTETCPVGVSTEPGTKRPILKLSTA*
AF_2010_repII_A1DRAFT_100082593	3300000597	Forest Soil	MIKWNEAVFDRADEDLMVRINREQDDEFCRMLRATLRAGKETCPVGVSTEPGTKRPILKLSTA*
AF_2010_repII_A1DRAFT_100816731	3300000597	Forest Soil	MANAPKXTNGGRGLMIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA*
AF_2010_repII_A1DRAFT_101487601	3300000597	Forest Soil	MIKWNEAVSDRADGDLMVRINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKKPILNYRRPEKGETNA*
AP72_2010_repI_A10DRAFT_10071282	3300000651	Forest Soil	MANAPKRINGEGGLMIKWNEAVFDRADEDLMVRINREQDDEFCXKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA*
AF_2010_repII_A001DRAFT_100668552	3300000793	Forest Soil	MIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGTETCPVGVSTEPGTRRPILKLSTA*
AF_2010_repII_A001DRAFT_100910212	3300000793	Forest Soil	AVSDRADEDLMVQMNREQDDEFCRKLLAALRAGKETCPVGVSTEPGTKRPILQLSTANA*
AF_2010_repII_A001DRAFT_101276161	3300000793	Forest Soil	MIKWNEAVFDRADEDHMGRINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKRPILKLSTA*
AF_2010_repII_A001DRAFT_101280121	3300000793	Forest Soil	MIKWNGAVSDRANEDLMVRINREQDDEFCQKLRAALQAGKETCPVGVSTEPGTNRP
AF_2010_repII_A10DRAFT_10061021	3300000816	Forest Soil	MANAPKRINGGRGLMIKWNEAVFDSADEDLMGRINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKKPILKLSTA*
AF_2010_repII_A10DRAFT_10353731	3300000816	Forest Soil	GLMIKWNEAVFDRADEDLMVQINREQDDEFCRKLRAALRAGNETCPVGVSTEPGTKRPILKLSTA*
F14TB_1074315351	3300001431	Soil	MIKWNEAVSDRADQDLMVRISREQDDEFCQKLRAALRAGKETCPVGVSTEPGPKRPIL
JGI12630J15595_100950701	3300001545	Forest Soil	SATMANAPKRTSGEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGKEICPVGVTTEPGTKRPILKLSTA*
JGI25614J43888_101668911	3300002906	Grasslands Soil	QQRWQMRLNAPMGKGGLMIKWNEAVSDRADEDLMVRVNREQDDEFCRKLRTALRAGKETCPVGVSMEPGTKRPILKLSTA*
JGI25617J43924_100060066	3300002914	Grasslands Soil	MRLNAPMGKGGLMIKWNEAVSDRADEDLMVRVNREQDDEFCRKLRTALRAGKETCPVGVSXEPGTKRPILKLSTA*
JGI25616J43925_100120257	3300002917	Grasslands Soil	MGKGGLMIKWNEAVSDRADEDLMVRVNREQDDEFCRKLRTALRAGKETCPVGVSTEPGTKRPILKLSTA*
Ga0066396_101217871	3300004267	Tropical Forest Soil	MIKWNEAVSDRADGDLMVRINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKKPMRHGA*
Ga0066395_102760381	3300004633	Tropical Forest Soil	MIKWNEAVFDRADEDLMVQINREQDDEFCRKLRAALRAGNETCPVGVSTEPGTKRPILKLSTA*
Ga0066388_1004282922	3300005332	Tropical Forest Soil	MRLNASMGKGLMIKWNEAVSDRADGDLMVRINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKKPMRHGA*
Ga0066388_1016431422	3300005332	Tropical Forest Soil	MIKWNEAVFDRADEDLMGRINREQDDEFCRKLRAALRAGKETCPVGVTTEPGT
Ga0066388_1031928172	3300005332	Tropical Forest Soil	MIKWNEAVSDRADGDLMVRINQEQDDEFCRKLRAALWAGKETCPVGVTTEPGTKKPILNYRRPEIRETNA*
Ga0066388_1040354731	3300005332	Tropical Forest Soil	MGEGLMIKWNEAVSDRADGDLMVRINREQDDEFCRKLRTALWAGKETCPIGVSTEPGTKKPTLNYRRPE*
Ga0066388_1048306601	3300005332	Tropical Forest Soil	MIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGKETCPVGVTTEPGTKRPILKLSTA*
Ga0008090_100810233	3300005363	Tropical Rainforest Soil	MIKWDEAVFDRADEDLMVQINREQDDEFCRKLRAALRAGNETCPVGVSTEPGTKRPILKLSTA*
Ga0008090_100930112	3300005363	Tropical Rainforest Soil	MIKWNEAVSDGADEDLRVRINREQDDEFCQKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA
Ga0008090_101019251	3300005363	Tropical Rainforest Soil	MIKWNEAVFDRADEDLMVQINRKHDDEFCRKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA*
Ga0008090_101267861	3300005363	Tropical Rainforest Soil	LMIKWNEAVFDSADEDLMGRINREQDDEFCRKLRAALWTGKETCPVGVSTEPGTKKPILKLSTA*
Ga0008090_101349282	3300005363	Tropical Rainforest Soil	MIKWNEAVFDSADEDLMGRINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKKPILKLSTA*
Ga0070709_107861221	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIKWNEAVFDRADEDLMVQINREQDDEFCRKLRAALRVGNETCPVGVSTEPGTKRPILKLSTA*
Ga0070708_1020688571	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIKWNETVSDRADEDLMVRINREQDDEFCRKLRAALRAGKETCPVGVTAEPGTKRPILKLSTA*
Ga0070706_1008086422	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MANAPKRTNGEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGRETRPVGVTTEPGTKRPILKLSTA*
Ga0070707_1002346143	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALQAGKETCPVGVSTEPGTKRPILKLSAA*
Ga0070696_1014065771	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MANAPKRTSGEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGKETCPVGVSTEPGTKRPVLKLSTA*
Ga0066700_107409611	3300005559	Soil	SFRKPRSSATMANAPKRTNGEGGLMIKWNETVYDRADEDLMVRINREQDDEFCQKLRAALRVGKETCPVGVSTEPGTKRPILKLSAA*
Ga0066903_1004058822	3300005764	Tropical Forest Soil	MIKWNEAVFDRADEDLMVQINRKQDDEFCRKLRAALWAGKETCPVGVSTEPGTKRPILKLSTA*
Ga0066903_1038760101	3300005764	Tropical Forest Soil	MANAPKRINGGRLMIKWNEAVFDRADEDLMGRINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKKPVLKLSTA*
Ga0066903_1042011831	3300005764	Tropical Forest Soil	GKCASMGKGLMIKWNEAVSDRADGDLMVQINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKKPILNYLRRL*
Ga0066903_1074154452	3300005764	Tropical Forest Soil	MTNAPKRINGEGLMIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRARKETCPVGVNTEPGTKRPILKLSTA*
Ga0066903_1076993952	3300005764	Tropical Forest Soil	MIKWNEAVFDRADEDLMVQINREQDDEFCRKLRAALRAGNETCPVGVSTEPGTKRPVLKLSTA*
Ga0066652_1017454951	3300006046	Soil	MANAPKRTNGEGGLMIKWNETVYDRADEDLMVRINREQDDEFCRKLRAALRAGKETCPVGVSTEPGTKRAILNLSTA*
Ga0075428_1000902546	3300006844	Populus Rhizosphere	MIKWNEAVSDRADQDLMVRISREQDDEFCRKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA*
Ga0075426_108634691	3300006903	Populus Rhizosphere	MIKWNEAVFDRAEEDLMVQINREQDDEFCRKLRAALRAGNETCPVGVSTEPGTKRPILKLSTA*
Ga0126384_116232961	3300010046	Tropical Forest Soil	MIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRARKETCPVGVSTEPGTKRPILKLSTA*
Ga0126373_109664991	3300010048	Tropical Forest Soil	MIKWNEAVFDTADEDLMFQINREQDDEFCRKLRAALRAGNETCPVGVSTEPGTKRPILKLSTA*
Ga0126373_114716591	3300010048	Tropical Forest Soil	MANAPKRTNGEGGLMIKWNEAVSDGADEDLRVRINREQDDEFCQKLRAALRAGKETCPVGVSTEPGTKRPILRLSTA*
Ga0126376_100912013	3300010359	Tropical Forest Soil	MIKWNDAVFDSADEDLMGRINREQDDEFCRKLRAALWAGKETCPVGVSTEPARRNLS*
Ga0126372_100422465	3300010360	Tropical Forest Soil	MIKWNEAVSDGADEDLRVRINREQDDEFCQKLRAALRAGKETCPVGVSTEPGTKRPILRLSTA*
Ga0126372_125676351	3300010360	Tropical Forest Soil	DGGLMIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGTETCPVGVSTEPGTRRPILKLSTA*
Ga0126378_108502562	3300010361	Tropical Forest Soil	GEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALRAGKETCPVGVRTEPGTKRPILKLSTA*
Ga0126381_1047305672	3300010376	Tropical Forest Soil	LMIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGTETCPVGVSTEPGTRRPILKLSTA*
Ga0134126_112003811	3300010396	Terrestrial Soil	MIKWNGAVFDRADEDLMVWINREQDDEFCRKLRAALRVGNETCPVGVSTEPGTKRP
Ga0124850_100025615	3300010863	Tropical Forest Soil	MIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALWAGKETCPVGVSTEPGTKRPILKLSTA*
Ga0137399_113092611	3300012203	Vadose Zone Soil	NETVYDRADEDLMVRINREQDDEFCQKLRAALRVGKETCPVGVSTEPGTKRPILKLSTA*
Ga0137376_100612073	3300012208	Vadose Zone Soil	MIKWNETVYDRADEDLMVRINRKQDDEFCQKLRAALRVGKETCPVGVSTEPGTKRPILKLSTA*
Ga0137359_100594502	3300012923	Vadose Zone Soil	MIKWNEAVSDRADEDLMVRVNREQDDEFCRKLRTALRAGKETCPVGVSTEPGTKRPILKLSTA*
Ga0126375_116337881	3300012948	Tropical Forest Soil	MIKWNEAVFDRADEDLMVQINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTQRPILKLSTA*
Ga0126375_120103221	3300012948	Tropical Forest Soil	RTNGEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA*
Ga0164299_108555401	3300012958	Soil	MANAPKRTNGEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA*
Ga0182036_113157931	3300016270	Soil	APKRTNGEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA
Ga0182041_109866111	3300016294	Soil	MANAPKRIKGEGLMIKWNEAVSDRADGDLMVRINREQDDEFCRKLRAALWAGKETCPVGVSMEPGTKKPILNYRRPEIRETNA
Ga0182041_116472402	3300016294	Soil	TMANAPKRTNGEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA
Ga0182033_106851091	3300016319	Soil	MANAPKRIKGEGLMIKWNEAVSDRADGDLMVRINREQDDEFCRKLRAALWAGKETCPVGVTTEPGTKKPILNYRRPEIRETNA
Ga0182034_117213741	3300016371	Soil	DEDLMVRINREQDDEFCRKLRAALSAGRETCPVGVSTEPGTKKPILKLSAA
Ga0182040_102778212	3300016387	Soil	MIKWNEVVFNRTDEDLMVRINREQDDEFCRKLQAALWAGKETCPVGVSTEPGTKRPILKL
Ga0182040_114963291	3300016387	Soil	MIKWNEAVFDRADEDLMDQINREQDDEFCRKLRAALRAGNETCPVGVSTEPGTKKPILKLSAA
Ga0182037_103188832	3300016404	Soil	MIKRNQAVSDRAGEDLMVRINREQDDEFCRKLRAALSAGKETCPVGVNTEPGTKKPILKLSAA
Ga0182038_111552322	3300016445	Soil	GGLMIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGKETCPVGVTTEPGTKRPILKLSTA
Ga0066662_104813402	3300018468	Grasslands Soil	MIKWNETVSDRADEDLMVRINREQDDEFCRKLRAALRAGKETCPVGVSTEPGTKRAILKLSTA
Ga0179591_10154062	3300024347	Vadose Zone Soil	MIKWNEAVFDRADEDLMVWINRQQDDEFCRKLRAALRAGKETCPVGVITEPGTKRPI
Ga0179587_108881411	3300026557	Vadose Zone Soil	KGGLMIKWSEAVSARADEDLMVRVNREQDDEFCRKLRTALRAGKETCPVGVSTEPGTKRPILKLSTA
Ga0209466_10043433	3300027646	Tropical Forest Soil	MIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGTETCPVGVSTEPGTRRPILKLSTA
Ga0209799_10060661	3300027654	Tropical Forest Soil	MIKWNEAVFDRADEDLMVQINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKRPILK
Ga0209465_102194801	3300027874	Tropical Forest Soil	MIKWNEAVFDRADEDLMVQINREQDDEFCRKLRAALRAGNETCPVGVSTEPGTKRPILKLSTA
Ga0209465_106349531	3300027874	Tropical Forest Soil	GLMIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGTETCPVGVSTEPGTRRPILKLSTA
Ga0209526_101278122	3300028047	Forest Soil	MANAPKRTSGEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGKEICPVGVTTEPGTKRPILKLSTA
Ga0318516_100412012	3300031543	Soil	MIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA
Ga0318516_101427093	3300031543	Soil	MIKWNEAVFDSADEDLMGRINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKKPILKLSTA
Ga0318534_100266463	3300031544	Soil	MIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRARKETCPVGVSTEPGTKRPILKLSTA
Ga0318534_101168142	3300031544	Soil	MIKWNDAVFDSADEDLMGRINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKKPILKLSTA
Ga0318538_101579803	3300031546	Soil	MIKWNEAVSDRADQDLMVRINREQDDEFCRKLRAALRARKETCPVGVSTEPGTKRPILKLSTA
Ga0318528_100919962	3300031561	Soil	MIKWSEAVFDSADEDLMGRINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKKPILKLSTA
Ga0318555_100520494	3300031640	Soil	MANAPKRTNGEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA
Ga0318542_101218074	3300031668	Soil	MIKWNEAVSDRADEDLMVRINREQDDDFCRKLRAALRAGTETCPVGVSTEPGTRRPI
Ga0318572_108166392	3300031681	Soil	MANAPKAPMGKGGLMIKWNEAVSDRADEDLIVRINREQDDEFCRKLRAALRAGKETCPVGVTTEPGTKRPILKLSTA
Ga0306917_101178853	3300031719	Soil	MIKWNEAVSDRADGDLMVRINREQDDEFCRKLRAALWAGKETCPVGVSTGPGTKRPILKLSTA
Ga0306917_102540503	3300031719	Soil	MIKWNEAVFDRADEDLMGQINREQDDEFCRKLRAALRAGNETCPVGVSTEPGTKRPILKLSTA
Ga0318493_108981032	3300031723	Soil	GGVMIKWNEAVSDRADEDLMVRINREQDDDFCRKLRAALRAGTETCPVGVSTEPGTRRPILKLSTA
Ga0318501_107676091	3300031736	Soil	RWQMRLNAPMGKGLMIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALWAGKETCPVGVSTEPGTKRPILKLSTA
Ga0306918_101024083	3300031744	Soil	MIKRNQAVSDRADEDLMVRINREQDDEFCRKLRAALSAGMETCPVGVNTEPGTKKPILKLSAA
Ga0318502_100251291	3300031747	Soil	MIKWNEAVSDRADEDLMVRINREQDDDFCRKLRAALRAGTETCPVGVSTEPGTRRPILKLSTA
Ga0318537_101598251	3300031763	Soil	MIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGNETCPVGVSTEPGTKRPILKLSTA
Ga0318554_100553124	3300031765	Soil	MIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALWAGKETCPIGVSTEPGTKRPILKLSTA
Ga0318509_106421181	3300031768	Soil	IKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGKETCPVGVTTEPGTKRPILKLSTA
Ga0318529_101125023	3300031792	Soil	KGLMIKWSEAVFDSADEDLMGRINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKKPILKLSTA
Ga0318503_100261654	3300031794	Soil	MIKWNEAVSDRADQDLMVRINREQDDEFCRKLRAALRARKETCPVGVSTEPGTK
Ga0318557_100550393	3300031795	Soil	MIKWNEAIFDSADEDLMGRINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKKPILKLSTA
Ga0318550_104620191	3300031797	Soil	MIKWNEAVSDRADGDLMVRINREQDDEFCRKLRAALWAGKETCPVGVSTGPGTKRPILK
Ga0318523_100112751	3300031798	Soil	PKRTNGEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA
Ga0318523_101384041	3300031798	Soil	MIKWNEAVFDSADEDLMGRINREQDDEFCRKLRAALWAGKETCPLGVSTEPGTKKPILKLSTA
Ga0318565_105913051	3300031799	Soil	GEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA
Ga0318517_101021871	3300031835	Soil	GLMIKWNDAVFDSADEDLMGRINREQDDEFCRKLRAALWAGKETCPVGVSTEPGTKKPILKLSTA
Ga0318544_100704214	3300031880	Soil	MIKWNEAVSDRADEDLMVRINREQDDDFCRKLRAALRAGTETCPVGVSTEPGTRRPILKL
Ga0318520_100310034	3300031897	Soil	MIKWNEAVSDRADEDLIVRINREQDDEFSRKLRAALRAGKETCPVGVSTEPGTKRPILKL
Ga0318520_101342645	3300031897	Soil	MIKWNEAVSDRADEDLMVRINREQDDDFCRKLRAALRAGTETCPVGVSTEPG
Ga0318520_103629642	3300031897	Soil	RSNGEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA
Ga0318520_111099001	3300031897	Soil	SMGRGLMIKWNEAVSDRADQDLMVRINREQDDEFCRKLRAALRARKETCPVGVSTEPGTKRPILKLSTA
Ga0306923_103341635	3300031910	Soil	MIKWNEAVSDRADKDLMARINREQDDEFCRKLRAALWAGKETCPVGVTTEPGTKKPILNYRRPEIRETNA
Ga0306923_108637722	3300031910	Soil	MIKWNEVVFNRTDEDLMVRINREQDDEFCRKLQAALWAGKETCPVGVSTEPGTKKPILKLSTGLPER
Ga0306926_109947611	3300031954	Soil	KWNEAVSDRADEDLMVRINREQDDEFCQKLRAALWAGKETCPVGVSTEPGTKRPILKLST
Ga0306922_100457407	3300032001	Soil	MIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA
Ga0318562_101949851	3300032008	Soil	MIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGKETCPVGVSTEPGTKKPILKLSTA
Ga0318563_101687761	3300032009	Soil	MIKWNDAVFDSADEDLMGRINREQDDEFCQKLRAALWAGKETCPVGVSMEPGTKRPILK
Ga0310911_108875112	3300032035	Soil	KGKGLMIKWNEVVFNRTDEDLMVRINREQDDEFCRKLQAALWAGKETCPVGVSTEPGTKKPILKLSTGLPERNCG
Ga0318570_105680003	3300032054	Soil	KWNEAVFDSADEDLMGRINREQDDEFCRKLRAALWAGKETCPLGVSTEPGTKKPILKLST
Ga0318533_100062342	3300032059	Soil	MIKWNEAVSDRADGDLMVRINREQDDEFCRKLRAALWAGKETCPVGVTTEPGTKKPILNYRRPEIRETNA
Ga0318510_101260731	3300032064	Soil	MIKWNEAVSDRADEDLIVRINREQDDEFSRKLRAALRAGKETCPVGVSTEPGTKRPILKLSTA
Ga0318525_105488942	3300032089	Soil	SNDGGLMIKWNEAVSDRADEDLMVRINREQDDEFCRTLRAALRAGTETCPVGVSTEPGTRRPILKLSTA
Ga0318525_106866621	3300032089	Soil	MIKWNEAVSDRADEDLMVRINREQDDEFCQKLRAALRAGKETCPVGVSTEPGTK
Ga0318540_101995881	3300032094	Soil	EGVMIKWNEAVSDRADGDLMVRINREQDDEFCRKLRAALWAGKETCPVGVSMEPGTKKPILNYRRPEIRETNA
Ga0307471_1003712232	3300032180	Hardwood Forest Soil	MANAPKRTNGEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGKEICPVGVTTEPGTKRPILKLSTA
Ga0306920_1031858591	3300032261	Soil	ANAPKRTNGEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGKETCPVCVTTEPGTKRPILKLSTA
Ga0310914_104515882	3300033289	Soil	INWNEAVSDRADEDLMVRINREQDDEFCQKLRAALWAGKETCPVGVSTEPGTKRPILKLSTA
Ga0310914_111333732	3300033289	Soil	RTNGEGGLMIKWNEAVSDRADEDLMVRINREQDDEFCRKLRAALRAGKETCPVCVTTEPGTKRPILKLSTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066242

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences