Metagenome Family F066283

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066283
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	71 residues
Representative Sequence	IPIQSVYEPMLPESATDRYQLVVDGQYYRRAQQVTKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGRNVG
Number of Associated Samples	70
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	10.48 %
% of genes near scaffold ends (potentially truncated)	87.40 %
% of genes from short scaffolds (< 2000 bps)	94.49 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.654 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.071 % of family members)
Environment Ontology (ENVO)	Unclassified (63.780 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.055 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.14% β-sheet: 0.00% Coil/Unstructured: 56.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01041	DegT_DnrJ_EryC1	40.16
PF05050	Methyltransf_21	1.57
PF01370	Epimerase	0.79
PF00892	EamA	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	40.16
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	40.16
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	40.16
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	40.16
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	40.16
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	40.16

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.65 %
All Organisms	root	All Organisms	28.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.65 %
cellular organisms	root	All Organisms → cellular organisms	28.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.62 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.65 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.36 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.57 %
Holosporales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.24 %
Usitatibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae	1.57 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.57 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.57 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.79 %
unclassified Holosporales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → unclassified Holosporales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.24 %
Usitatibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter	1.57 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.57 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.57 %
Holosporales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → unclassified Holosporales → Holosporales bacterium	0.79 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.24 %
Usitatibacter palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	1.57 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.57 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.79 %
Holosporales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → unclassified Holosporales → Holosporales bacterium	0.79 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.24 %
Usitatibacter palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	1.57 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.57 %
Bradyrhizobium sp. 4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 4	0.79 %
Holosporales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → unclassified Holosporales → Holosporales bacterium	0.79 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q01ECRSJ	Not Available	503	Open in IMG/M
3300004633\|Ga0066395_10850788	Not Available	550	Open in IMG/M
3300005179\|Ga0066684_10478804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300005332\|Ga0066388_102789125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	892	Open in IMG/M
3300005332\|Ga0066388_103326741	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005332\|Ga0066388_103368217	All Organisms → cellular organisms → Bacteria → Proteobacteria	816	Open in IMG/M
3300005332\|Ga0066388_103853754	Not Available	765	Open in IMG/M
3300005332\|Ga0066388_105437958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300005332\|Ga0066388_106432805	Not Available	592	Open in IMG/M
3300005332\|Ga0066388_107095103	Not Available	563	Open in IMG/M
3300005332\|Ga0066388_107369098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300005467\|Ga0070706_100940247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300005536\|Ga0070697_101363592	Not Available	633	Open in IMG/M
3300005713\|Ga0066905_101223123	Not Available	672	Open in IMG/M
3300005713\|Ga0066905_101528565	Not Available	608	Open in IMG/M
3300005764\|Ga0066903_101419675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1305	Open in IMG/M
3300005764\|Ga0066903_102134987	Not Available	1079	Open in IMG/M
3300005764\|Ga0066903_103252465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	878	Open in IMG/M
3300005764\|Ga0066903_103442420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	853	Open in IMG/M
3300005764\|Ga0066903_107231082	Not Available	574	Open in IMG/M
3300005764\|Ga0066903_107530858	Not Available	561	Open in IMG/M
3300009792\|Ga0126374_11477914	Not Available	556	Open in IMG/M
3300010046\|Ga0126384_10259707	Not Available	1408	Open in IMG/M
3300010046\|Ga0126384_10932680	Not Available	786	Open in IMG/M
3300010046\|Ga0126384_11523857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300010048\|Ga0126373_10387637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1419	Open in IMG/M
3300010048\|Ga0126373_10947335	Not Available	926	Open in IMG/M
3300010359\|Ga0126376_10626273	Not Available	1022	Open in IMG/M
3300010360\|Ga0126372_11858003	Not Available	647	Open in IMG/M
3300010361\|Ga0126378_13222109	Not Available	519	Open in IMG/M
3300010398\|Ga0126383_12357027	Not Available	618	Open in IMG/M
3300010398\|Ga0126383_13236620	Not Available	532	Open in IMG/M
3300011271\|Ga0137393_10116459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 4	2199	Open in IMG/M
3300011271\|Ga0137393_10673043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	887	Open in IMG/M
3300012096\|Ga0137389_10459876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	1090	Open in IMG/M
3300012208\|Ga0137376_10355089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1273	Open in IMG/M
3300012209\|Ga0137379_10244629	Not Available	1707	Open in IMG/M
3300012209\|Ga0137379_10397643	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300012362\|Ga0137361_10877303	Not Available	814	Open in IMG/M
3300012948\|Ga0126375_10945238	Not Available	697	Open in IMG/M
3300012971\|Ga0126369_11150766	Not Available	865	Open in IMG/M
3300012971\|Ga0126369_12432903	Not Available	609	Open in IMG/M
3300016294\|Ga0182041_10935135	Not Available	781	Open in IMG/M
3300016294\|Ga0182041_11184304	Not Available	696	Open in IMG/M
3300016294\|Ga0182041_11972135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → unclassified Holosporales → Holosporales bacterium	543	Open in IMG/M
3300016319\|Ga0182033_10265100	Not Available	1402	Open in IMG/M
3300016319\|Ga0182033_10363187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1214	Open in IMG/M
3300016319\|Ga0182033_11085398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	714	Open in IMG/M
3300016319\|Ga0182033_11190310	Not Available	682	Open in IMG/M
3300016357\|Ga0182032_10985451	Not Available	719	Open in IMG/M
3300016357\|Ga0182032_11106299	Not Available	680	Open in IMG/M
3300016357\|Ga0182032_11652345	Not Available	558	Open in IMG/M
3300016371\|Ga0182034_10093587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2131	Open in IMG/M
3300016371\|Ga0182034_10583593	Not Available	941	Open in IMG/M
3300016371\|Ga0182034_10637112	Not Available	902	Open in IMG/M
3300016387\|Ga0182040_10594983	Not Available	895	Open in IMG/M
3300016387\|Ga0182040_11203687	Not Available	637	Open in IMG/M
3300016387\|Ga0182040_11340007	Not Available	605	Open in IMG/M
3300016404\|Ga0182037_11474394	Not Available	603	Open in IMG/M
3300016422\|Ga0182039_11100839	Not Available	715	Open in IMG/M
3300016422\|Ga0182039_11401360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	635	Open in IMG/M
3300016422\|Ga0182039_12277893	Not Available	500	Open in IMG/M
3300016445\|Ga0182038_10190916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1603	Open in IMG/M
3300016445\|Ga0182038_11030754	Not Available	729	Open in IMG/M
3300021560\|Ga0126371_10697016	Not Available	1164	Open in IMG/M
3300021560\|Ga0126371_13615008	Not Available	522	Open in IMG/M
3300027846\|Ga0209180_10720776	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300027874\|Ga0209465_10655816	Not Available	517	Open in IMG/M
3300031543\|Ga0318516_10306861	Not Available	917	Open in IMG/M
3300031545\|Ga0318541_10576736	Not Available	629	Open in IMG/M
3300031546\|Ga0318538_10350407	Not Available	797	Open in IMG/M
3300031561\|Ga0318528_10533013	Not Available	630	Open in IMG/M
3300031561\|Ga0318528_10643980	Not Available	568	Open in IMG/M
3300031564\|Ga0318573_10803658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300031572\|Ga0318515_10630363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300031573\|Ga0310915_10001709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	11496	Open in IMG/M
3300031679\|Ga0318561_10334875	Not Available	829	Open in IMG/M
3300031719\|Ga0306917_10385946	Not Available	1092	Open in IMG/M
3300031744\|Ga0306918_10797592	Not Available	737	Open in IMG/M
3300031769\|Ga0318526_10154388	Not Available	934	Open in IMG/M
3300031770\|Ga0318521_10770014	Not Available	586	Open in IMG/M
3300031780\|Ga0318508_1019358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1638	Open in IMG/M
3300031794\|Ga0318503_10123329	Not Available	830	Open in IMG/M
3300031819\|Ga0318568_10296891	Not Available	1003	Open in IMG/M
3300031819\|Ga0318568_10671188	Not Available	644	Open in IMG/M
3300031819\|Ga0318568_10729477	Not Available	615	Open in IMG/M
3300031845\|Ga0318511_10184351	Not Available	923	Open in IMG/M
3300031879\|Ga0306919_10892932	Not Available	681	Open in IMG/M
3300031879\|Ga0306919_11196300	Not Available	577	Open in IMG/M
3300031880\|Ga0318544_10037270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1715	Open in IMG/M
3300031896\|Ga0318551_10517444	Not Available	685	Open in IMG/M
3300031896\|Ga0318551_10644530	Not Available	612	Open in IMG/M
3300031910\|Ga0306923_10427301	Not Available	1505	Open in IMG/M
3300031910\|Ga0306923_10635527	Not Available	1194	Open in IMG/M
3300031912\|Ga0306921_11652409	Not Available	694	Open in IMG/M
3300031941\|Ga0310912_10609894	Not Available	849	Open in IMG/M
3300031941\|Ga0310912_10808359	Not Available	724	Open in IMG/M
3300031942\|Ga0310916_10523841	Not Available	1009	Open in IMG/M
3300031945\|Ga0310913_10047107	Not Available	2803	Open in IMG/M
3300031945\|Ga0310913_10504586	Not Available	859	Open in IMG/M
3300031945\|Ga0310913_10934150	Not Available	609	Open in IMG/M
3300031945\|Ga0310913_11309260	Not Available	502	Open in IMG/M
3300031947\|Ga0310909_10139678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1983	Open in IMG/M
3300031947\|Ga0310909_10151291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1908	Open in IMG/M
3300031947\|Ga0310909_10595179	Not Available	924	Open in IMG/M
3300031954\|Ga0306926_10761195	Not Available	1170	Open in IMG/M
3300031954\|Ga0306926_10842919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1102	Open in IMG/M
3300031954\|Ga0306926_11980992	Not Available	655	Open in IMG/M
3300031954\|Ga0306926_11987685	Not Available	654	Open in IMG/M
3300031954\|Ga0306926_12275067	Not Available	601	Open in IMG/M
3300031981\|Ga0318531_10078678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1434	Open in IMG/M
3300032001\|Ga0306922_11070260	Not Available	828	Open in IMG/M
3300032025\|Ga0318507_10073875	Not Available	1387	Open in IMG/M
3300032025\|Ga0318507_10457840	Not Available	555	Open in IMG/M
3300032035\|Ga0310911_10550386	Not Available	669	Open in IMG/M
3300032043\|Ga0318556_10313063	Not Available	821	Open in IMG/M
3300032055\|Ga0318575_10364109	Not Available	733	Open in IMG/M
3300032063\|Ga0318504_10085870	Not Available	1389	Open in IMG/M
3300032063\|Ga0318504_10626217	Not Available	517	Open in IMG/M
3300032076\|Ga0306924_10894865	Not Available	982	Open in IMG/M
3300032090\|Ga0318518_10640420	Not Available	541	Open in IMG/M
3300032261\|Ga0306920_100440034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1937	Open in IMG/M
3300032261\|Ga0306920_100875812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1314	Open in IMG/M
3300032261\|Ga0306920_104001637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.25%
Loam	Environmental → Terrestrial → Soil → Loam	15.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_07008640	2170459005	Grass Soil	PPSGSAEETSRHGICVPIQGVYEPMLPESATERYQLVVDGEYYSVXRAQQVTKEVSYANLNEMPALDIARYLGKRVVRRLKRSFGY
Ga0066395_108507881	3300004633	Tropical Forest Soil	VYESMLPQSATNRYQLVVDDEYYSVRRAQQVAKEVSYANLDEMPAVDIAKYLGGRVVRRLKRTIGR*
Ga0066684_104788041	3300005179	Soil	MLPEKATDRYQLVVDGEYYSVRRARQVTKEVSHANLNEMPAAEIAKYLGKRVLRRLKRTIGTLSAREGRG*
Ga0066388_1027891251	3300005332	Tropical Forest Soil	VPIQGVYEPMLPESATDRYQLVVDGEYYSVRRARQVTKEISYANLNEMPAVDIAKYLGGRIVRRLKRSVGR*
Ga0066388_1033267412	3300005332	Tropical Forest Soil	PMLPESATDRYQLVVDGEFYSVRRARQVTKETSYANLNEMPAVDIAKYLGGRIVRRLKRSVGR*
Ga0066388_1033682172	3300005332	Tropical Forest Soil	VPIQGVYEPMLPESATDRYQLVVDGEYYSVRRARQVTKEASYANLNEMPVVDIAKYLGNRVVRRLKRSFGH*
Ga0066388_1038537542	3300005332	Tropical Forest Soil	CIPIQSVYEPMLPESATDRYQLVVDGQYYRRAQQVSKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRGIGRGPNLG*
Ga0066388_1054379582	3300005332	Tropical Forest Soil	KLHDTEFCIPIQGVYEPMLPESAIDRYQLVVDGQYYRRAQQVSKEIGYAKLDEMPAIYIAKYLSGRIVRRLKRGLGRGRNVG*
Ga0066388_1064328051	3300005332	Tropical Forest Soil	EPMLPEGATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPAIDIARYLGSRVARRLKRTIGG*
Ga0066388_1070951032	3300005332	Tropical Forest Soil	GATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPAIDIAKYLGNRVVRRLKRSFGH*
Ga0066388_1073690981	3300005332	Tropical Forest Soil	PMLPESATDRYQLVVDGEFYSVRRARQVTKETSYANLNEIPAVDIAKYLGRRIVRRLKRSVGR*
Ga0070706_1009402472	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	FCVPIQGVYEPMLPEAATDRYQLVVDGEYYSVRRAKEVSYANLNEMPALDIAKYLGNRVVRRIRRTIGH*
Ga0070697_1013635922	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PMLPESAIDRYQLVVDGQYYRRAQQVSKEIGYAKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNAG*
Ga0066905_1012231231	3300005713	Tropical Forest Soil	CIPIQSVYEPMLPESATDRYQLVVDGQYYRRAQQVSKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGPNLG*
Ga0066905_1015285652	3300005713	Tropical Forest Soil	CIPIQSVYEPMLPESATDRYQLVVDGQYYRRAQQVSKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGQGRNAD*
Ga0066903_1014196753	3300005764	Tropical Forest Soil	VPIQGVYEPMLPEAATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPAIDIAKYLGNRVVRRLKRTIGR*
Ga0066903_1021349871	3300005764	Tropical Forest Soil	VYEPMLPEGATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPALDIAKYLGRRVVRRLKRSFGH*
Ga0066903_1032524652	3300005764	Tropical Forest Soil	MLPESATDRYQLVVDGEYYSVRRARQVTKEANYANLNEMPAIDIARYLSNRVMRRLKRTIGH*
Ga0066903_1034424203	3300005764	Tropical Forest Soil	IQGVYEPMLPESATDRYQLVVDGEYYSGRRARYVTREITDINLNQTPAIDIARHLGKRIIRRLKRTIGH*
Ga0066903_1072310821	3300005764	Tropical Forest Soil	LPEGATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPALDIAKYLGHRVVRRIKRTVGH*
Ga0066903_1075308582	3300005764	Tropical Forest Soil	TEFCIPIQGVYEPMLPEAATDRYQLVVDGEYYSLRRAQQVTKEVSYANLNEMPVLDIAKYLGSRVVRRFKRSIGH*
Ga0126374_114779142	3300009792	Tropical Forest Soil	EFCVPIQGVYEPMLPEGATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPAIDIARYLGSRVARRLKRTIGG*
Ga0126384_102597073	3300010046	Tropical Forest Soil	FCVPIQGVYEPMLPEGATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPAIDIAKYLGNRVARRLKRSLGL*
Ga0126384_109326802	3300010046	Tropical Forest Soil	GVYEPMLPESATDRYPLVVDGQYYRRAQQVSKEIGYSKLDEMPAVYIAKYLSGRIVRRLKRSIGQGRNAG*
Ga0126384_115238571	3300010046	Tropical Forest Soil	VPIQGVYEPMLPEGATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPALDIARYLGNRVVRRLKRSFGY*
Ga0126373_103876371	3300010048	Tropical Forest Soil	MLPQSATNRYQLVVDDEYYSVRRAQQVAKEVSYANLDEMPAVDIAKYLGGRVVRRLKRTIGR*
Ga0126373_109473352	3300010048	Tropical Forest Soil	QKKLHDTEFCIPIQGVYEPMLPESAVDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPATYIAKYLSGRIVRRLKRGLGRGRNVG*
Ga0126376_106262731	3300010359	Tropical Forest Soil	TTHLLVVLQKKLHDTEFCIPIQGVYEPMLPEPAVDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS*
Ga0126372_118580032	3300010360	Tropical Forest Soil	LGFRQFVSLHRYQLVVDGQYYRRAQQVSKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRGIGRGPNLG*
Ga0126378_132221091	3300010361	Tropical Forest Soil	LPEAATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPAIDIAKYLGHRVVRRLKRSLGL*
Ga0126383_123570271	3300010398	Tropical Forest Soil	LLPEGATDRYQLGVDGEYYSARRAQQVTKESSYANLNEMPAIDIARYLGSRVVRRIKRSFGH*
Ga0126383_132366201	3300010398	Tropical Forest Soil	PMLRESATERYQLVVDGEYYSVRRARQVTKETSYANLNEMPAVDIAKYLGNRLVRRLKRTIGH*
Ga0137393_101164594	3300011271	Vadose Zone Soil	LPESATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPAADIARYLGKRVVRRLKRTMGH*
Ga0137393_106730432	3300011271	Vadose Zone Soil	LPESATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPAVDIARYLGRRVVRRLKRTIGH*
Ga0137389_104598762	3300012096	Vadose Zone Soil	LPESATDRYRLVVDGEYYSVRRAQQVTKEVSYANLNEMPAVDIARYLGKRVVRRLKRTIGH*
Ga0137376_103550891	3300012208	Vadose Zone Soil	MLPESATERYQLVVDGEFYSVRRARQVTKETSYANLNEMPAVDIAKYLGNRVVRRLKRSFGH*
Ga0137379_102446291	3300012209	Vadose Zone Soil	PMLPESATDRYQLVVDGKYYRRAQQVTKEIGYAKLDEMPAVYIGRYLSGRIVRRLKRIIGQGRNAG*
Ga0137379_103976431	3300012209	Vadose Zone Soil	PMLPESATDRYQLVVDGKYYRRAQQVTKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGQGRNAG*
Ga0137361_108773031	3300012362	Vadose Zone Soil	PIQGVYEPMLPESATDRYQLVVDGKYYKRAQQVTKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGQGRNAG*
Ga0126375_109452381	3300012948	Tropical Forest Soil	NPPPSDSAKEAARHGILRSDSGVYEPMLPESATDRYQLVVDGDYYSVRRAQQVTKEVSYANLNEMPALDIAKYLGNRVVRRLKRSFGH*
Ga0126369_111507662	3300012971	Tropical Forest Soil	IQGVYEPMLPETATDRYQLVVDGESRAQQVTKETSYIARYLGKRVVRRLKRTIGR*
Ga0126369_124329031	3300012971	Tropical Forest Soil	VPIQGVYEPMLPEAATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPALDIAKYLGKRVVRRLKQSVGH*
Ga0182041_109351351	3300016294	Soil	VYEPMLPETAIDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNAS
Ga0182041_111843042	3300016294	Soil	EFCVPIQGVYEPMLPESATDRYQLVVDGEYYSVRRARQVTKEAAYANLNEIPAVDIAKYLGQRIVRRLKRTIGR
Ga0182041_119721352	3300016294	Soil	EPMLPESATDRYQLVVDGQYYRRAQQVTKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGQGRNAG
Ga0182033_102651001	3300016319	Soil	IPIQSVYEPMLPESATDRYQLVVDGQYYRRAQQVSKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGPNLG
Ga0182033_103631871	3300016319	Soil	FCVPIQGVYEPMLPESATDRYQLVVDGEYYSVRRARQVTKDASYANLNEMPAIDIAKYLGNRVVRRLKRTIGR
Ga0182033_110853982	3300016319	Soil	PMLPEAATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPAIDIAKYLGSRVVRRIKRSFGR
Ga0182033_111903101	3300016319	Soil	FCIPIQGVYEPMLPETAIDRYQLVVDGQYYKRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0182032_109854511	3300016357	Soil	EFCIPIQGVYEPMLPETAIDRYQLVVDGEYYRRAQQVSKEIGHAKLDEMPAIYIAKYLSGRIVRRLKRRLGRGRNVG
Ga0182032_111062991	3300016357	Soil	DSESCVPIQGVYESMLPQSATNRHQLVVDGEYYSGRRARYVTREITDVNLNQTPAIDIARHLGRRIVRRLKRTIRH
Ga0182032_116523451	3300016357	Soil	QKKLHDTEFCIPIQGVYEPMLPETAIDRYQLVVDGQYYKRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0182034_100935871	3300016371	Soil	KLHDTEFCIPIQSVYEPMLPESATDRYQLVVDGQYYRRAQQVTKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGRNVG
Ga0182034_105835932	3300016371	Soil	GAKTTHLLVVLQKKLHDAEFCIPIQGVYEPMLPETAIDRYQLVVDGEYYRRAQQVSKEIGHAKLDEMPAIYIAKYLSGRIVRRLKRGLGRGRNVG
Ga0182034_106371121	3300016371	Soil	KLHDTEFCIPIQGVYEPMLPESAVDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0182040_105949832	3300016387	Soil	LPESATDRYQLVVDGQYYRRAQQVTKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGQGRNAG
Ga0182040_112036871	3300016387	Soil	LPEQKPSNRYQLVVDGEYRSVRRAQQVTKEVSYANLNEMPVLDIAKYLSNRVVRRLKR
Ga0182040_113400072	3300016387	Soil	QKKLHDADFCVPIQGVYEPMLPECATERYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPALDIAKYLVSRVVRRLKRSFGH
Ga0182037_114743941	3300016404	Soil	TEFCIPIQSVYEPMLPESATDRYQLVVDGQYYRRAQQVSKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGPNLG
Ga0182039_111008391	3300016422	Soil	DTEFCIPIQGVYEPMLPETAIDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0182039_114013602	3300016422	Soil	VDEPMRPEAATDRYQLAVDGRYYSVRRAQQVTKEVSYANLNEMPAIDIAKYLGSRVVRRIKRSFGR
Ga0182039_122778931	3300016422	Soil	PESATDRYQLVVDGEYYSVRRAQEVTKEVSYASLNEMPALDIAKYLGKRVVRRLKQSVGH
Ga0182038_101909162	3300016445	Soil	QGVYEPMLPESATDRYQLVVDGEYYSVRRARRVTKEAGYANLNEMPAIDIAKYLGNRVVRRLKRTIGR
Ga0182038_110307542	3300016445	Soil	LHDTEFCIPIQSVYEPMLPESATDRYQLVVDGQYYRRAQQVTKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGRNVG
Ga0126371_106970161	3300021560	Tropical Forest Soil	MLPQSATNRYQLVVDDEYYSVRRAQQVAKEVSYANLDEMPAVDIAKYLGGRVVRRLKRTIGR
Ga0126371_136150081	3300021560	Tropical Forest Soil	VYEPMLPETAVDRYQLVVDGQYYKRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0209180_107207762	3300027846	Vadose Zone Soil	TDRYQLVVDGEYYRRAQQVTKEVDYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGRNAG
Ga0209465_106558161	3300027874	Tropical Forest Soil	QGVYEPMLPESATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPAVDIARYLGKRVVRRLKRTIGR
Ga0318516_103068611	3300031543	Soil	VYEPMLPETAIDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0318541_105767362	3300031545	Soil	LPESATDRYPLVVDGQYYRRAQQVSKEIGYSKLDEMPAVYIAKYLSGRIVRRLKRSIGQGRNAG
Ga0318538_103504071	3300031546	Soil	VVLQKKLHDTEFCIPIQGVYEPMLPETAIDRYQLVVDGQYYKRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0318528_105330132	3300031561	Soil	PIQSVYEPMLPESATDRYQLVVDGQYYRRAQQVSKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGPNLG
Ga0318528_106439802	3300031561	Soil	LHDTEFCIPIQGVYEPMLPETAIDRYQLVVDGQYYKRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0318573_104674072	3300031564	Soil	TAIDRYQLVVDGQYYKRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNV
Ga0318573_108036581	3300031564	Soil	GAKTTHLLVVLQKKLHDTEFCIPIQGVYEPMLPETAIDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0318515_106303632	3300031572	Soil	LLVVLQKKLHDTEFCIPIQGVYEPMLPETAIDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0310915_100017094	3300031573	Soil	MLPESATDRYQLVVDGQYYRRAQQVTKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGRNVG
Ga0318561_103348751	3300031679	Soil	LLEQKPSNRYQLGVDGEYRSVRRAQQVTKEVSYANPNEMPVLDIAKYLGRRVVRRLKRNIGH
Ga0318496_100439483	3300031713	Soil	SAIDRYQLVVDGQYYRRAQQVSKEIGYAKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNV
Ga0306917_103859461	3300031719	Soil	GVYEPMLPEGATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPASDIAKYLGSRVVRRLKRTIGR
Ga0306918_107975921	3300031744	Soil	PIQGVYEPMLPEGATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPASDIAKYLGSRVVRRLKRTIGR
Ga0318526_101543881	3300031769	Soil	YEPMLPESAVDRYRLVVDGQYYRRAQQVSKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGRNVG
Ga0318521_107700142	3300031770	Soil	YEPVLPESATDRYQLVVDGEYYSVRRARQVTKEARDAHLNVMPAVDIARYLGGRVVRRLKRSIGR
Ga0318508_10193581	3300031780	Soil	PLPEQKPSNRYQLVVDGEYRSVRRAQQVTKEVSYANPNEMPVLDIAKYLGRRVVRRLKRSFGH
Ga0318503_101233292	3300031794	Soil	LPEQKPSNRYQLVVDGEYRSVRRAQQVTKEVSYANPNEMPVLDIAKYLGRRVVRRLKRNIGH
Ga0318568_102968912	3300031819	Soil	EFCIPIQGVYEPMLPETAIDRYQLVVDGEYYRRAQQVSKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGPNLG
Ga0318568_106711882	3300031819	Soil	IPIQGVYEPMLPETAIDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0318568_107294771	3300031819	Soil	IPIQSVYEPMLPESATDRYQLVVDGQYYRRAQQVTKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGRNVG
Ga0318511_101843512	3300031845	Soil	HLLVVLQKKLHDTEFCIPIQGVYEPMLPETAIDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0306919_108929321	3300031879	Soil	YEPMLPETAIDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0306919_111963002	3300031879	Soil	HLLVVLQKKLHDTEFCIPIQGVYEPMLPETAIDRYQLVVDGQYYKRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0318544_100372703	3300031880	Soil	LVVLQKKLHDTEFCIPIQSVYEPMLPESATDRYQLVVDGQYYRRAQQVSKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGPNLG
Ga0318551_105174442	3300031896	Soil	AKTTHLLVVLQKKLHDAEFCIPIQGVYEPMLPETAVDRYQLVVDGEYYRRAQQVSKEIGHAKLDEMPAIYIAKYLSGRIVRRLKRGLGRGRNVG
Ga0318551_106445301	3300031896	Soil	TEFCIPIQSVYEPMLPESATDRYQLVVDGQYYRRAQQVTKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGRNVG
Ga0306923_104273011	3300031910	Soil	VVLQKKLHDAEFCIPIQGVYEPMLPETAIDRYQLVVDGEYYRRAQQVSKEIGHAKLDEMPAIYIAKYLSGRIVRRLKRGLGRGRNVG
Ga0306923_106355271	3300031910	Soil	LQKKLHDTEFCIPIQGVYEPMLPETAIDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0306921_116524091	3300031912	Soil	EPMLPEGATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPAIDIAKYFGNRVVRRLKRSFGH
Ga0310912_106098941	3300031941	Soil	GAKTTHLLVVLQKKLHDAEFCIPIQGVYEPMLPETAVDRYQLVVDGEYYRRAQQVSKEIGHAKLDEMPAIYIAKYLSGRIVRRLKRGLGRGRNVG
Ga0310912_108083592	3300031941	Soil	DVYEPMLPESATDRYPLVVDGQYYRRAQQVSKEIGYSKLDEMPAVYIAKYLSGRIVRRLKRSIGQGRNAG
Ga0310916_105238411	3300031942	Soil	LHDTEFCVPIQGVYEPMLPETAVDRYQLVVDGEYYRRAQQVSKEIGHAKLDEMPAIYIAKYLSGRIVRRLKRGLGRGRNVG
Ga0310913_100471071	3300031945	Soil	EFCIPIQGVYEPMLPETAIDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0310913_105045862	3300031945	Soil	HLLVVLQKKLHDAEFCIPIQGVYEPMLPETAVDRYQLVVDGEYYRRAQQVSKEIGHAKLDEMPAIYIAKYLSGRIVRRLKRGLGRGRNVG
Ga0310913_109341502	3300031945	Soil	QGVYEPMLQEGATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPASDIAKYLGSRVVRRLKRTIGR
Ga0310913_113092601	3300031945	Soil	GLQGVYEPMLPESATDRYQLVVDGEYYSVRRARQVTKEARDAHLNVMPAVDIARYLGGRVVRRLKRSIGR
Ga0310909_101396783	3300031947	Soil	IPIQGVYEPMLPETAIDRYQLVVDGQYYKRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0310909_101512914	3300031947	Soil	EFCVPIQGVYEPMLPEAATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPALDIAKYLGNRVVRRLKRSIGR
Ga0310909_105951791	3300031947	Soil	AEFCIPIQGVYEPMLPETAVDRYQLVVDGEYYRRAQQVSKEIGHAKLDEMPAIYIAKYLSGRIVRRLKRGLGRGRNVG
Ga0306926_107611952	3300031954	Soil	ATDRYQLVVDGQYYRRAQQVTKEIGYAKLDEMPAVYIAKYLSGRIVRRIKRSIGRGRNVG
Ga0306926_108429192	3300031954	Soil	MLPESATDRYHLVVDGEYYSVRRAQQVTKETSYAHLNEMPAVDIARYLSKRVVRRIKRSIGY
Ga0306926_119809922	3300031954	Soil	TEFCIPIQGVYEPMLPETAIDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0306926_119876852	3300031954	Soil	FCVPIQGVYEPMLPESATDRYQLVVDGEYYSVRRARQVTKEAAYANLNEMPAVDIARYLGNRVVRRLKRSFGH
Ga0306926_122750672	3300031954	Soil	LPESATDRYQLVVDGEYYSVRRARQVTKEAAYANLNEMPAVDIAKYLGNRVVRRLKRTVG
Ga0318531_100786783	3300031981	Soil	LPEQKPSNRYQLVVDGEYRSVRRAQQVTKEVSYANLNEMPVLDIAKYLSNRVVRRLKRSFGH
Ga0318531_105227762	3300031981	Soil	TDRYQLVVDGQYYRRAQQVTKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGRNVG
Ga0306922_110702601	3300032001	Soil	EFCVPIQGVYEPMLPEGATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPASDIAKYLGSRVVRRLKRTIGR
Ga0318507_100738751	3300032025	Soil	EPMLPESATDRYQLVVDGQYYRRAQQVSKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGPNLG
Ga0318507_104578401	3300032025	Soil	TEFCIPIQGVYEPMLPESAVDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0310911_105503862	3300032035	Soil	KKLHDTEFCIPIQGVYEPMLPETAIDRYQLVVDGQYYRRAQQVSKEIGYSKLDEMPAIYIAKYLSGRIVRRLKRGIGRGRNVS
Ga0318556_103130632	3300032043	Soil	YEPMLPESAIDRYQLVVDGQYYRRAQQVSKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGPNLG
Ga0318575_103641091	3300032055	Soil	LPEQKPSNRYQLVVDGEYRSVRRAQQVTKEVSYANLNEMPVLDIAKYLGNRVVRRLK
Ga0318504_100858701	3300032063	Soil	LVVLQKKLHDTEFCIPIQSVYEPMLPESATDRYQLVVDGQYYRRAQQVTKEIGYAKLDEMPAVYIAKYLSGRIVRRLKRSIGRGRNVG
Ga0318504_106262171	3300032063	Soil	PEGATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPASDIAKYLGSRVVRRLKRTIGR
Ga0306924_108948651	3300032076	Soil	PMLPEGATDRYQLVVDGEYYSVRRAQQVTKEVSYANLNEMPAIDIAKYFGNRVVRRLKRSFGH
Ga0318518_106404201	3300032090	Soil	RGRGGPLLEQKPSNRYQLGVDGEYRSVRRAQQVTKEVSYANLNEMPVLDIAKYLSNRVVRRLKRSFGH
Ga0306920_1004400341	3300032261	Soil	GVYEPMLPESATDRYQLVVDGEYYSVRRARQVTKEAAYANLNEMPAVDIARYLGNRVVRRLKRSFGH
Ga0306920_1008758122	3300032261	Soil	DRRLLTGLQGVYEPMLPESATDRYQLVVDGEYYSVRRARQVTKEARDAHLNVMPAVDIARYLGGRVVRRLKRSIGR
Ga0306920_1040016371	3300032261	Soil	MLPESATNRYQLVINGEYYSVKRARQVTKEAGYANLNEMPALDIARYLGNRVVRRLKRTIGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066283

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences