Metagenome / Metatranscriptome Family F066339

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F066339
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	65 residues
Representative Sequence	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGREVAQTAARVRAIPLHAVSREEAVRWREAA
Number of Associated Samples	87
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.57 %
% of genes near scaffold ends (potentially truncated)	29.37 %
% of genes from short scaffolds (< 2000 bps)	76.19 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (71.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.952 % of family members)
Environment Ontology (ENVO)	Unclassified (30.952 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.730 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.61% β-sheet: 0.00% Coil/Unstructured: 42.39%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF09678	Caa3_CtaG	11.11
PF12833	HTH_18	9.52
PF04480	DUF559	7.94
PF02589	LUD_dom	3.17
PF00903	Glyoxalase	3.17
PF02040	ArsB	2.38
PF00582	Usp	1.59
PF13183	Fer4_8	1.59
PF04149	DUF397	0.79
PF13338	AbiEi_4	0.79
PF02720	DUF222	0.79
PF01833	TIG	0.79
PF02401	LYTB	0.79
PF00498	FHA	0.79
PF16916	ZT_dimer	0.79
PF11870	LutB_C	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	2.38
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	2.38
COG0761	4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH	Lipid transport and metabolism [I]	1.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	69.84 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	64.29 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	55.56 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	30.16 %
Unclassified	root	N/A	28.57 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.17 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.38 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.16 %
Unclassified	root	N/A	28.57 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.38 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.38 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.16 %
Unclassified	root	N/A	28.57 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.38 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.38 %
uncultured Frankineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples → uncultured Frankineae bacterium	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.16 %
Unclassified	root	N/A	28.57 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.38 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.38 %
uncultured Frankineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples → uncultured Frankineae bacterium	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10028241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2024	Open in IMG/M
3300004082\|Ga0062384_100637548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300004091\|Ga0062387_100167848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1286	Open in IMG/M
3300004092\|Ga0062389_102951669	Not Available	636	Open in IMG/M
3300005332\|Ga0066388_101739986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1105	Open in IMG/M
3300005591\|Ga0070761_10928361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300005602\|Ga0070762_10003979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7097	Open in IMG/M
3300005602\|Ga0070762_10087155	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1785	Open in IMG/M
3300005602\|Ga0070762_10309323	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300005610\|Ga0070763_10582213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300005712\|Ga0070764_11036361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300005764\|Ga0066903_100058956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4775	Open in IMG/M
3300010048\|Ga0126373_10618718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1137	Open in IMG/M
3300010048\|Ga0126373_12395421	Not Available	588	Open in IMG/M
3300010343\|Ga0074044_11146836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300010361\|Ga0126378_10052577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3805	Open in IMG/M
3300010361\|Ga0126378_12921456	Not Available	545	Open in IMG/M
3300010366\|Ga0126379_10120806	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2379	Open in IMG/M
3300010376\|Ga0126381_100140530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3155	Open in IMG/M
3300010880\|Ga0126350_11693648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300011120\|Ga0150983_12771364	All Organisms → cellular organisms → Bacteria → Terrabacteria group	843	Open in IMG/M
3300011404\|Ga0153951_1106353	Not Available	528	Open in IMG/M
3300014489\|Ga0182018_10042456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2821	Open in IMG/M
3300014489\|Ga0182018_10569479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300016319\|Ga0182033_10383154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1184	Open in IMG/M
3300016357\|Ga0182032_10074525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2307	Open in IMG/M
3300016422\|Ga0182039_11728815	Not Available	572	Open in IMG/M
3300017937\|Ga0187809_10048432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1370	Open in IMG/M
3300017942\|Ga0187808_10510364	Not Available	557	Open in IMG/M
3300017959\|Ga0187779_10840799	Not Available	629	Open in IMG/M
3300017970\|Ga0187783_10006513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8568	Open in IMG/M
3300017970\|Ga0187783_10037909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3570	Open in IMG/M
3300017970\|Ga0187783_10050819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3059	Open in IMG/M
3300017970\|Ga0187783_10054353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2954	Open in IMG/M
3300017970\|Ga0187783_10295787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1181	Open in IMG/M
3300017970\|Ga0187783_10474513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	907	Open in IMG/M
3300017970\|Ga0187783_10694738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300017972\|Ga0187781_10513571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	860	Open in IMG/M
3300017973\|Ga0187780_10501169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867	Open in IMG/M
3300017974\|Ga0187777_10389486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	963	Open in IMG/M
3300017975\|Ga0187782_11678053	Not Available	503	Open in IMG/M
3300018062\|Ga0187784_11090264	Not Available	634	Open in IMG/M
3300018085\|Ga0187772_10006551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6076	Open in IMG/M
3300020580\|Ga0210403_10982287	Not Available	662	Open in IMG/M
3300020581\|Ga0210399_10615343	Not Available	898	Open in IMG/M
3300020582\|Ga0210395_10371835	Not Available	1075	Open in IMG/M
3300021088\|Ga0210404_10109124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1407	Open in IMG/M
3300021180\|Ga0210396_10694878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	879	Open in IMG/M
3300021181\|Ga0210388_10343512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1312	Open in IMG/M
3300021388\|Ga0213875_10015395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3722	Open in IMG/M
3300021388\|Ga0213875_10206161	Not Available	925	Open in IMG/M
3300021402\|Ga0210385_10076332	All Organisms → cellular organisms → Bacteria	2293	Open in IMG/M
3300021402\|Ga0210385_10107106	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1957	Open in IMG/M
3300021407\|Ga0210383_10688486	Not Available	879	Open in IMG/M
3300021407\|Ga0210383_11716688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300021477\|Ga0210398_10482197	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1010	Open in IMG/M
3300021560\|Ga0126371_10369141	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1573	Open in IMG/M
3300021560\|Ga0126371_10741176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1130	Open in IMG/M
3300021560\|Ga0126371_10834883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1067	Open in IMG/M
3300022716\|Ga0242673_1099786	Not Available	560	Open in IMG/M
3300022718\|Ga0242675_1077854	Not Available	604	Open in IMG/M
3300025588\|Ga0208586_1083497	Not Available	699	Open in IMG/M
3300027072\|Ga0208238_1003992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1172	Open in IMG/M
3300027096\|Ga0208099_1047974	Not Available	611	Open in IMG/M
3300027110\|Ga0208488_1044807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300027297\|Ga0208241_1007171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1501	Open in IMG/M
3300027370\|Ga0209010_1002914	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3872	Open in IMG/M
3300027619\|Ga0209330_1036917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1113	Open in IMG/M
3300027648\|Ga0209420_1010693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3280	Open in IMG/M
3300027652\|Ga0209007_1016047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1948	Open in IMG/M
3300027829\|Ga0209773_10044888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1774	Open in IMG/M
3300027879\|Ga0209169_10280257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples → uncultured Frankineae bacterium	875	Open in IMG/M
3300027889\|Ga0209380_10013991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4599	Open in IMG/M
3300027895\|Ga0209624_10978314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300028906\|Ga0308309_10109614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2153	Open in IMG/M
3300028906\|Ga0308309_11511984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300031090\|Ga0265760_10117141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300031543\|Ga0318516_10415042	Not Available	775	Open in IMG/M
3300031543\|Ga0318516_10484580	Not Available	710	Open in IMG/M
3300031543\|Ga0318516_10617792	Not Available	618	Open in IMG/M
3300031543\|Ga0318516_10836177	Not Available	519	Open in IMG/M
3300031544\|Ga0318534_10039361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2617	Open in IMG/M
3300031679\|Ga0318561_10453246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	706	Open in IMG/M
3300031708\|Ga0310686_103529810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4150	Open in IMG/M
3300031713\|Ga0318496_10032918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2628	Open in IMG/M
3300031713\|Ga0318496_10139762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1318	Open in IMG/M
3300031713\|Ga0318496_10247247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	983	Open in IMG/M
3300031723\|Ga0318493_10329381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	828	Open in IMG/M
3300031723\|Ga0318493_10527669	Not Available	654	Open in IMG/M
3300031723\|Ga0318493_10740386	Not Available	552	Open in IMG/M
3300031747\|Ga0318502_10693040	Not Available	615	Open in IMG/M
3300031748\|Ga0318492_10212399	Not Available	993	Open in IMG/M
3300031764\|Ga0318535_10260824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300031765\|Ga0318554_10873889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300031778\|Ga0318498_10254719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	791	Open in IMG/M
3300031805\|Ga0318497_10868867	Not Available	506	Open in IMG/M
3300031823\|Ga0307478_11118192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300031890\|Ga0306925_11044195	Not Available	830	Open in IMG/M
3300031912\|Ga0306921_12476037	Not Available	539	Open in IMG/M
3300031947\|Ga0310909_11015229	Not Available	677	Open in IMG/M
3300032041\|Ga0318549_10047998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1753	Open in IMG/M
3300032042\|Ga0318545_10369534	Not Available	517	Open in IMG/M
3300032044\|Ga0318558_10131134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1196	Open in IMG/M
3300032064\|Ga0318510_10457256	Not Available	549	Open in IMG/M
3300032065\|Ga0318513_10530385	Not Available	576	Open in IMG/M
3300032066\|Ga0318514_10529995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300032068\|Ga0318553_10227026	Not Available	974	Open in IMG/M
3300032783\|Ga0335079_11730843	Not Available	610	Open in IMG/M
3300032805\|Ga0335078_10069690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5143	Open in IMG/M
3300032895\|Ga0335074_10020898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9231	Open in IMG/M
3300032895\|Ga0335074_10036165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6898	Open in IMG/M
3300032895\|Ga0335074_10058180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5285	Open in IMG/M
3300032895\|Ga0335074_10082959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4282	Open in IMG/M
3300032895\|Ga0335074_10174362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2673	Open in IMG/M
3300032895\|Ga0335074_10349616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1645	Open in IMG/M
3300032895\|Ga0335074_10457949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1348	Open in IMG/M
3300032895\|Ga0335074_10521923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1222	Open in IMG/M
3300032895\|Ga0335074_10622219	Not Available	1069	Open in IMG/M
3300032895\|Ga0335074_10763404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	913	Open in IMG/M
3300032895\|Ga0335074_10786132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	892	Open in IMG/M
3300032895\|Ga0335074_10901069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300032896\|Ga0335075_10004178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22640	Open in IMG/M
3300032896\|Ga0335075_10077419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4471	Open in IMG/M
3300032896\|Ga0335075_11152509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300032896\|Ga0335075_11408165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300032896\|Ga0335075_11512597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.62%
Host-Associated	Host-Associated	2.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.86%
Aquatic	Environmental → Aquatic	4.76%
Plants	Host-Associated → Plants	1.59%
Fungi	Host-Associated → Fungi	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.86%
Freshwater	Environmental → Aquatic → Freshwater	4.76%
Roots	Host-Associated → Plants → Roots	1.59%
Mycelium	Host-Associated → Fungi → Mycelium	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	28.57%
Loam	Environmental → Terrestrial → Soil → Loam	18.25%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.59%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	26.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.59%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.59%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	15.08%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.97%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.59%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.59%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.59%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.79%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.79%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300027072	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF013 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100282412	3300003505	Forest Soil	MSTWFWLNIPXCAVIFSAMVAIPLWMVIKRPDTGREVAEVKARMRAIPLHAVSRQEVARWRAAEAA*
Ga0062384_1006375482	3300004082	Bog Forest Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGHEVRAAIARLEAIPLHAVSRDEVARWREAA*
Ga0062387_1001678482	3300004091	Bog Forest Soil	MGTWLAVNIVLSAMFFAAMVGIPLWMVIKRPDTGRDIAETTARVEAIPLHAVSREEAVRWRAAA*
Ga0062389_1029516692	3300004092	Bog Forest Soil	TWLAVNIVLSAMFFAAMVGIPLWMVIKRPDTGRDIAETTARVEAIPLHAVSREEAVRWRAAA*
Ga0066388_1017399862	3300005332	Tropical Forest Soil	MATWLTVNIILSALFFAAWAGIPLWMVIKRPDTGREVAQAAARVEAIPLHAVSREEAVRWREAA*
Ga0070761_109283611	3300005591	Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGYEAAEVKARIRAIPLHAVSRQEVVRWREARWREAA*
Ga0070762_100039798	3300005602	Soil	MGTWFWLNIPLAAVIFSAVVGIPLWMVIKRPDTGYEVAEVKARIRAIPLHAVSRQEVVRWREARWREAA*
Ga0070762_100871552	3300005602	Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGHEVAEVRARIRAIPLHAVSRQEVVRWREARWREAA*
Ga0070762_103093232	3300005602	Soil	MGSWFWLNIPISTAIFAAVVGIPLWLTFKRPDTGREVAEVKARIEAIPLHVVSRDEVLAWREAA*
Ga0070763_105822132	3300005610	Soil	MGSWFWLNIPICTAIFAAMVGIPLWLTFKRPDTGREVAEVKARIEATPLHAVSRDEVLAWREAA*
Ga0070764_110363611	3300005712	Soil	MGSWFWLNIPICTAIFAAMVGIPLWLTFKRPDTGREVAEVKARIEAIPLHVVSRDEVLAWREAA*
Ga0066903_1000589567	3300005764	Tropical Forest Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGREVAQTAARVQAIPLHAVSREEAVRWREAA*
Ga0126373_106187181	3300010048	Tropical Forest Soil	MTWLTLNIVLSALFFAAWVGIPLWMVIKRPDTGREVAATTARVQALPLHAVSRHEVGRWREAA*
Ga0126373_123954212	3300010048	Tropical Forest Soil	MATWLTVNIILSALFFAAWVGIPLWMVLKRPDTGREVAETAARVEAIPLHAVSREEAVRWREAA*
Ga0074044_111468361	3300010343	Bog Forest Soil	MKPAQTGRRDEGGVMGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGHEVAEVKARIRAIPMHAVSRQEVVRWREARWREAA*
Ga0126378_100525774	3300010361	Tropical Forest Soil	MTGRRICRRRYEGGDMATWLTVNIVLSALFFAAWVGIPLWMVIKRPDTGREVAQTAARVQAIPLHAVSREEAVRWREAA*
Ga0126378_129214562	3300010361	Tropical Forest Soil	MATWLTVNIILSALFFAAWVGIPLWMVLKRPDTGREVAETAARVEAIPLHAVSREEAVRW
Ga0126379_101208063	3300010366	Tropical Forest Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGREVAQTAARVRAIPLHAVSREEAVRWREAA*
Ga0126381_1001405304	3300010376	Tropical Forest Soil	MTGRRICRRRYEGGDMATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGREVAQTAARVQAIPLHAVSREEAVRWREAA*
Ga0126350_116936482	3300010880	Boreal Forest Soil	VQESRAEEPGPSAAKEKIMSTWFWLNVPLGTVIFSAVVGLPLWMVIKRPDTGQDVTETKARVERLPLHVVSAEEVVRWRNAA*
Ga0150983_127713641	3300011120	Forest Soil	WFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGHEVAEVRARIRAIPLHAVSRQEVVRWREARWREAA*
Ga0153951_11063531	3300011404	Attine Ant Fungus Gardens	TWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGYEAAEVKARIRAIPLHAVSRQEAVRWREARWREAA*
Ga0182018_100424563	3300014489	Palsa	MSTWFWLNVPLCVAIFSAVVGIPLWLTFKRPDTGREVAEVRARLTAVPMHAVSRDEVAAWRAAA*
Ga0182018_105694792	3300014489	Palsa	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGHEVAEVRARIRAIPLHAVSRQEVARWRAAEAA*
Ga0182033_103831542	3300016319	Soil	MTWLTVNIVLSALFFAAWVGIPLWMVIKRPDTGREVAQAAARVEAIPLHAVSREEAVRWREAA
Ga0182032_100745251	3300016357	Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGHEVAATAARVEAIPLHAVSRDEAV
Ga0182039_117288152	3300016422	Soil	LSALFFAAWVGIPLWMVIKRPDTGHEVAATAARVEAIPLHAVSRDEAVRWREAA
Ga0187809_100484322	3300017937	Freshwater Sediment	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGREVAATAARVDAIPLHAVSREEVVRWREAA
Ga0187808_105103641	3300017942	Freshwater Sediment	MTWLAANIVLSTLVFAAVVGIPLWMVIKRPDTGREVAETAARVEAIPLHAVSREEVVRWREAA
Ga0187779_108407991	3300017959	Tropical Peatland	MSWLALNIVLSAMFFAAWVGIPLWMVIKRPDTGREIAETTARVKAIPLHAVSRQEAGHWREREEAGAWRQ
Ga0187783_100065135	3300017970	Tropical Peatland	MGTWLAVNIVLSAIFFAAWVGIPMWMVIKRPDTGREIAETTARAKAIPLHAVSRHEVSRWREREEAGAWRQAA
Ga0187783_100379094	3300017970	Tropical Peatland	MTWLTVNIVLSALFFAAWVGIPLWMVIKRPDTGREVAETTARVRAIPLHAVSHEEVVRWREAA
Ga0187783_100508192	3300017970	Tropical Peatland	MGTWFWLNIPLAAVIFSAMVGIPLWMVIKRPDTGQEVAEVKARIRAVPMHAVSRQEVVRWREARWREAA
Ga0187783_100543532	3300017970	Tropical Peatland	MAWLTVNIVLSALFFAAMVGIPLWMVIKRPDTGRDVAETTARVQAIPLHAVSHEEVVRWREAA
Ga0187783_102957872	3300017970	Tropical Peatland	MGTWFWLNIPLCAVIFSAVVGIPMWMVIKRPDTGHEIRKAAARLEVVPVHVVSREEVARWRDAA
Ga0187783_104745132	3300017970	Tropical Peatland	MGSWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGREVADVKARIRAIPLAAVSKQEVVRWRAAQWREAA
Ga0187783_106947381	3300017970	Tropical Peatland	GMGTWFWLDIPLCAVIFSAVVGIPLWMVIKRPDTGHEIRKAAARLEAAPVHVVSREELARWRDAA
Ga0187781_105135712	3300017972	Tropical Peatland	MGTWFWLNIPLAAVIFSAMVGIPLWMVIKRPDTGQEVAEAKARIRAIPMHAVSRQEVVRWREARWREAA
Ga0187780_105011691	3300017973	Tropical Peatland	MGTWLAVNIVLSAMFFAAWVGIPMWMVIKRPDTGQEIAETTARVKAIPLHAVSRQEAGHWREREEAGAWRQAA
Ga0187777_103894861	3300017974	Tropical Peatland	MGWLAVNIVLSALFFAAMVGIPLWMVIKRPDTGREVAETAARVEAIPLHAVSREEVVRWREAA
Ga0187782_116780531	3300017975	Tropical Peatland	MSTWFWLNIPICAVIFSAIVGIPLWMVIKRPDTGQEAAEIKARIRAIPLHVVSRQE
Ga0187784_110902641	3300018062	Tropical Peatland	MSTWSWLNIPICAVIFSAIVGIPLWMVIKRPDTGQEVAEVKARIRAVPMHAVSRQEVVRWREAGWREAA
Ga0187772_100065515	3300018085	Tropical Peatland	MSWLAVNIVLSAMFFAAWVGIPMWMVIKRPDTGQEVAETRARVEAIPLHAVSRQEAVRWREAA
Ga0210403_109822872	3300020580	Soil	MATWLTVNIILSVLFFAAWVGIPLWMVIKRPDTGRDVAQTTARVQAIPLHAVSREEAVRWRDAA
Ga0210399_106153431	3300020581	Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGRDVAQTTARVQAIPLHAVSREEAVRWREAA
Ga0210395_103718352	3300020582	Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGHEAAEVKARIRAIPLHAVSRQEVVRWREARWREAA
Ga0210404_101091242	3300021088	Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGHEVAEVRARIRAIPLHAVSRQEVVRWREARWREAA
Ga0210396_106948781	3300021180	Soil	MGTWFWLNIPLAAVIFSAVVGIPLWMVIKRPDTGYEVAEVKARIRAIPLHAVSRQEVVRWREARWREAA
Ga0210388_103435122	3300021181	Soil	MSTWFWLNIPICAVIFSAMVAIPLWMVIKRPDTGREVAEVKARMRAIPLHAVS
Ga0213875_100153953	3300021388	Plant Roots	MGTWFWLNVPLMVVIFSAVAGIPLWMVVKRPDTGHDVAETKARIEVLPLHAVSRQEAVRWREAA
Ga0213875_102061611	3300021388	Plant Roots	MGTWFWLNIPICAVIFSAMVGIPLWMVIKHPDTGHEAAEIKARIRAIPMHAVSRQEVVRWREARWREAA
Ga0210385_100763321	3300021402	Soil	MSTWFWLNIPLCAAIFSVMVGIPLWMVIKRPDTGREVAEVKARIRAVPMHAVSRQEVVRWREARWREAA
Ga0210385_101071062	3300021402	Soil	MSTWFWLNIPICAVIFSAMVAIPLWMVIKRPDTGREVAEVKARMRAIPLHAVSRQEVARWRAAEAA
Ga0210383_106884861	3300021407	Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGRDVTQTTARVQAIPLHAVSREEAVRWREAA
Ga0210383_117166881	3300021407	Soil	AVIFSAVVGIPLWMVIKRPDTGYEVAEVKARIRAIPLHAVSRQEVVRWREARWREAA
Ga0210398_104821971	3300021477	Soil	PMNKGGVMGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGHEVAEVRARIRAIPLHAVSRQEVVRWREARWREAA
Ga0126371_103691412	3300021560	Tropical Forest Soil	MATWLTVNIILSALFFAAWVGIPLWMVLKRPDTGREVAETAARVEAIPLHAVSREEAVRWREAA
Ga0126371_107411761	3300021560	Tropical Forest Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGREVAQTAARVQAIPLHAVSREEAVRWREAA
Ga0126371_108348832	3300021560	Tropical Forest Soil	MTWLTLNIVLSALFFAAWVGIPLWMVIKRPDTGREVAATTARVQALPLHAVSRHEVGRWREAA
Ga0242673_10997861	3300022716	Soil	MGTWFWLNIPLAAVIFSAMVGIPLWMVIKRPDTGHEAAEVKARIRAIPLHAVSRQEVVRWREARWREAA
Ga0242675_10778541	3300022718	Soil	RAGWHDGAGADRPMNKGGVMGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGHEVAEVRARIRAIPLHAVSRQEVVRWREARWREAA
Ga0208586_10834971	3300025588	Arctic Peat Soil	MATWFWLNIPLCAVIFAAVVGIPLWMVIKRPDTGHDVAETKARIARLPQHVVSTEEVIRWQNAA
Ga0208238_10039922	3300027072	Forest Soil	MSTWFWLNIPICAVIFSAMVAIPLWMVIKRPDTGYEAAEVKARIRAIPLHAVSRQEAVRWREARWREAA
Ga0208099_10479742	3300027096	Forest Soil	LNIPLCAVIFSAMVGIPLWMVIKRPDTGYEAAEVKARIRAIPLHAVSRQEAVRWREARWREAA
Ga0208488_10448072	3300027110	Forest Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGYEAAEVKARIRAIPLHAVSRQEVV
Ga0208241_10071711	3300027297	Forest Soil	MGTWFWLNIPLCAVIFSAVVGIPLWMVIKRPDTGHEAAEVKARIRAIPLHAVSRQEVVRWREARWREAA
Ga0209010_10029145	3300027370	Forest Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGHEVAEVRARIRAIPLHAVSRQEAVRWREARWREAA
Ga0209330_10369172	3300027619	Forest Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGYEAAEVKARIRAIPLHAVSRQEVVRWREARWREAA
Ga0209420_10106935	3300027648	Forest Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGHEVAEVRARIRAMPLHAVSRQEVVRWREARWREAA
Ga0209007_10160472	3300027652	Forest Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGYEVAEVRARIRAVPLHVVSRQEVVRWREARWREAA
Ga0209773_100448882	3300027829	Bog Forest Soil	MGTWLAVNIVLSAMFFAAMVGIPLWMVIKRPDTGRDIAETTARVEAIPLHAVSREEAVRWRAAA
Ga0209169_102802571	3300027879	Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGHEVAEVRARIRAIPLHAVSRQEV
Ga0209380_100139913	3300027889	Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGYEVAEVKARIRAIPLHAVSRQEVVRWREARWREAA
Ga0209624_109783141	3300027895	Forest Soil	MGSWFWLNIPICTAIFAAMVGIPLWLTFKRPDTGREVAEVKARIEAIPLHAVSRDEVLAWREAA
Ga0308309_101096142	3300028906	Soil	MGTWFWLNIPLAAVIFSAMVGIPLWMVIKRPDTGYEVAEVKARIRAIPLHAVSRQEVVRWREARWREAA
Ga0308309_115119841	3300028906	Soil	MGSWFWLNIPICTAIFAAMVGIPLWLTFKRPDTGREVAEVKARIEATPLHAVSRDEVLAWREAA
Ga0265760_101171412	3300031090	Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGHEVAEVRARIRAIPLHAVSRQEVVRWREARWREA
Ga0318516_104150421	3300031543	Soil	MATWLTVNIILSALFFGAMVGIPLWMVIKRPDTGREVAQAAARVEAIPLHAVSREEAVRWREAA
Ga0318516_104845802	3300031543	Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGREVAAAAARAQAIPLHAVSREEAGRWREAA
Ga0318516_106177921	3300031543	Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGHEVAATAARVEAIPLHAVSRDEAVRWREAA
Ga0318516_108361771	3300031543	Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGREVAQTAARVQAIPLRTVSREEAVRWREAA
Ga0318534_100393613	3300031544	Soil	MTWLTVNIVLSALFFAAWVGIPLWMVIKRPDTGREVAAAAARAQAIPLHAVSREEAGRWREAA
Ga0318561_104532462	3300031679	Soil	VNIILSALFFAAWVGIPLWMVIKRPDTGHEVAATAARVEAIPLHAVSRDEAVRWREAA
Ga0310686_1035298101	3300031708	Soil	MGSWFWLNIPICAAIFSAMVGIPLWLTLKRPDTGREVAEVKARIEAIPLHAVSRDEVLAWREAA
Ga0318496_100329183	3300031713	Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGQEVAAAAARVEAIPLHAVSRE
Ga0318496_101397623	3300031713	Soil	LLTVNIILSALFFAAWVGIPLWMVIKRPDTGHEVAATAARVEAIPLHAVSRDEAVRWREA
Ga0318496_102472472	3300031713	Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGREVAQTAARVQAIPLRTVSREEAVRW
Ga0318493_103293811	3300031723	Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGRDVAQGAARVEAIPLHAVSREEAVRWREAA
Ga0318493_105276692	3300031723	Soil	IILSALFFAAWVGIPLWMVIKRPDTGQEVAAAAARVEAIPLHAVSREEVVRWREAA
Ga0318493_107403862	3300031723	Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGHEVAATAARVEAIPLHAVSRDEAVRWRE
Ga0318502_106930401	3300031747	Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGHEVAATAARVEAIPLHAVSRDE
Ga0318492_102123992	3300031748	Soil	MATWLTVNIILSALFFGAMVGIPLWMVIKRPDTGREVAQAAARVEAIPLHAVSRDEAVRWREAA
Ga0318535_102608242	3300031764	Soil	MATWLTVNIILSALFFGAMVGIPLWMVIKRPDTGREVAQAAARVEAIPLHAVSR
Ga0318554_108738891	3300031765	Soil	TVNIILSALFFAAWVGIPLWMVIKRPDTGREVAQTAARVQAIPLRTVSREEAVRWRKAA
Ga0318498_102547191	3300031778	Soil	VNIILSALFFAAWVGIPLWMVIKRPDTGREVAQTAARVQAIPLRTVSREEAVRWREAA
Ga0318497_108688671	3300031805	Soil	SGQGGAERPQKLARQAACMTGRRICRRRYEGGDMATWLTVNIILSALFFAAWVGIPLWMVIKRPDTVREVAQTAARVQAIPLRTVSREEAVRWREAA
Ga0307478_111181921	3300031823	Hardwood Forest Soil	MGTWFWLNIPLCAVIFSAMVGIPMWMVIKRPDTGHEIKKAVARLEAVPVHVVSREEVVRWRDAA
Ga0306925_110441951	3300031890	Soil	MATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGQEVAAAAARVEAIPLHAVSREEVVRWREAA
Ga0306921_124760371	3300031912	Soil	GGAERPQKLARQAACMTGRRICRRRYEGGDMATWLTVNIILSALFFAAWVGIPLWMVIKRPDTGREVAQTAARVQAIPLRTVSREEAVRWREAA
Ga0310909_110152292	3300031947	Soil	ALFFGAMVGIPLWMVIKRPDTGREVAQAAARVEAIPLHAVSREEAVRWREAA
Ga0318549_100479982	3300032041	Soil	MTWLTVNIVLSALFFAAWVGIPLWMVIKRPDTGREVAQTAARVQAIPLRTVSREEAVRWREAA
Ga0318545_103695341	3300032042	Soil	VNIVLSALFFAAWVGIPLWMVIKRPDTGREVAAAAARAQAIPLHAVSREEAGRWREAA
Ga0318558_101311342	3300032044	Soil	MATCLTVNIILSALFFGAMVGIPLWMVIKRPDTGREVAQAAARVEAIPLHAVSREEAVRWREAA
Ga0318510_104572562	3300032064	Soil	TVNIILSALFFGAMVGIPLWMVIKRPDTGREVAQAAARVEAIPLHAVSREEAVRWREAA
Ga0318513_105303851	3300032065	Soil	MATGLTVNIILSALFFAAWVGIPLWMVIKRPDTGHEVAATAARVEAIPLHAVSRDEAVRWREAA
Ga0318514_105299952	3300032066	Soil	ALFFAAWVGIPLWMVIKRPDTGHEVAATAARVEAIPLHAVSRDEAVRWREAA
Ga0318553_102270262	3300032068	Soil	LTVNIILSALFFAAWVGIPLWMVIKRPDTGHEVAATAARVEAIPLHAVSRDEAVRWREAA
Ga0335079_117308431	3300032783	Soil	MGWLAVNIVLSALFFAAMVGIPLWMVIKRPDTGREVAGKAARVEAIPLHAVSREEVVRWREAA
Ga0335078_100696902	3300032805	Soil	MGTWFWLNIPLCAVIFSAIVGIPLWMVIKRPDTGHEVADVKARIRAIPLHAVSRQEVTRWREARWREAA
Ga0335074_100208987	3300032895	Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGREVAEVKARIRAVPMHAVSKQEVVRWREARWREAA
Ga0335074_100361658	3300032895	Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIKRPDTGHEVAEVKARIRAIPLHAVSRQEVVRWREARWREAA
Ga0335074_100581804	3300032895	Soil	MGTWFWLNIPLCAVIFSAMVGIPMWMVIKRPDTGHEIKKAVARLEAVPVHVVSKEEAVRWRDAA
Ga0335074_100829594	3300032895	Soil	MGSWFWLDIPLCAVIFSAMVGIPMWMVIKRPDTGHEIEKAAARLEAVPMHVVSREEVVRWREAA
Ga0335074_101743622	3300032895	Soil	MGTWFWLNIPLCAVIFSAMVGIPMWMVIKRPDTGHEIKKAVARLEAVPVHVVSREEVARWRDAA
Ga0335074_103496162	3300032895	Soil	MGTWFWLNIPLCAAIFSAMVGIPLWMVIKRPDSGHEVAEVKARIRAIPLHAVSRQEVVRWREARWREAA
Ga0335074_104579491	3300032895	Soil	MGTWFWLNIPLCAVIFSAIVGIPLWMVIKRPDTGREVAEVKARIRAVPMHAVSRQEVVRWREASWREAA
Ga0335074_105219231	3300032895	Soil	MGTWFWLNIPLCAVIFSAIVGIPLWMVIKRPDTGHEAAEVKARIRAVPLHAVSRQEVVRWREARWREAA
Ga0335074_106222192	3300032895	Soil	MGTWFWLNIPLCAVIFSAMVGIPLWMVIRRPDTGHEVAEVKARIRAIPLHAVSRQEVVRWREARWREAA
Ga0335074_107634041	3300032895	Soil	MGTWFWLNIPLCAVIFSAMVGIPMWMVIKRPDTGNEIKKAVARLEAVPVHVVSREEVVRWREAA
Ga0335074_107861321	3300032895	Soil	MGTWFWLNIPLCAVIFSAIVGIPLWMVIKRPDTGHEAAEVKARIRAIPLHAVSRQEVVRWREARWREAA
Ga0335074_109010691	3300032895	Soil	MGTWFWLNIPLCAVIFSAVVGIPLWMVIKHPDTAREVEMTKARIKAMPLHAVSRQEAERWREAA
Ga0335075_100041782	3300032896	Soil	MAGEIAGVTKEERKMGTWFWLNIPLCAVIFSAMVGIPMWMVIKRPDTGHEVARTKARIEALPLQVVSREEAARWRDAA
Ga0335075_100774193	3300032896	Soil	MGIWFWLDIPLCAVIFSAMVGIPMWMVIKRPDTGHETKKTAARLEAVPVHVVSREEVARWRDAA
Ga0335075_111525091	3300032896	Soil	MGTWFWLNIPLCAVIFSAMVGIPMWMVIKRPDTGHEVKKAVARLEAVPVHVVSREEVARWRDAA
Ga0335075_114081651	3300032896	Soil	MGTWFWLNIPLCAVIFSAMVGIPMWMVIKRPDTGHEIRMAVARLEAVPVHVVSHEEAVHWRDAA
Ga0335075_115125972	3300032896	Soil	MGSWFWLDIPLCAVIFSAMVGIPMWMVIKRPDTGHEIEKAAARLEAVPMHAVSREEVVRWRKAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066339

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences