Metagenome / Metatranscriptome Family F066362

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066362
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	66 residues
Representative Sequence	MLDLNQSVIVIADKGITYEGYIMARASGENGASAYRIGLEGAGFEQQGQWHKSSDVFVPEPVKDDAI
Number of Associated Samples	90
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.40 %
% of genes near scaffold ends (potentially truncated)	31.75 %
% of genes from short scaffolds (< 2000 bps)	75.40 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.381 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (42.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.730 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.16% β-sheet: 27.37% Coil/Unstructured: 69.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF02652	Lactate_perm	26.98
PF01244	Peptidase_M19	10.32
PF06172	Cupin_5	4.76
PF00005	ABC_tran	3.17
PF00450	Peptidase_S10	2.38
PF02604	PhdYeFM_antitox	1.59
PF13472	Lipase_GDSL_2	1.59
PF07978	NIPSNAP	1.59
PF01208	URO-D	1.59
PF13358	DDE_3	1.59
PF16576	HlyD_D23	0.79
PF07733	DNA_pol3_alpha	0.79
PF15937	PrlF_antitoxin	0.79
PF13620	CarboxypepD_reg	0.79
PF13744	HTH_37	0.79
PF01850	PIN	0.79
PF03721	UDPG_MGDP_dh_N	0.79
PF02811	PHP	0.79
PF13531	SBP_bac_11	0.79
PF00460	Flg_bb_rod	0.79
PF04014	MazE_antitoxin	0.79
PF07927	HicA_toxin	0.79
PF12979	DUF3863	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1620	L-lactate permease	Energy production and conversion [C]	26.98
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	10.32
COG3542	Predicted sugar epimerase, cupin superfamily	General function prediction only [R]	4.76
COG2939	Carboxypeptidase C (cathepsin A)	Amino acid transport and metabolism [E]	2.38
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	1.59
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.59
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.59
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.79
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	0.79
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.79
COG1256	Flagellar hook-associated protein FlgK	Cell motility [N]	0.79
COG1558	Flagellar basal body rod protein FlgC	Cell motility [N]	0.79
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.79
COG1749	Flagellar hook protein FlgE	Cell motility [N]	0.79
COG1815	Flagellar basal body rod protein FlgB	Cell motility [N]	0.79
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.79
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	0.79
COG4786	Flagellar basal body rod protein FlgG	Cell motility [N]	0.79
COG4787	Flagellar basal body rod protein FlgF	Cell motility [N]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
All Organisms	root	All Organisms	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
cellular organisms	root	All Organisms → cellular organisms	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	27.78 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	27.78 %
candidate division KSB3	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB3	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	26.19 %
candidate division KSB3 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB3 → candidate division KSB3 bacterium	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.59 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.79 %
candidate division KSB3 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB3 → candidate division KSB3 bacterium	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1.59 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.79 %
candidate division KSB3 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB3 → candidate division KSB3 bacterium	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10190397	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300004092\|Ga0062389_100231210	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300004152\|Ga0062386_100272302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1345	Open in IMG/M
3300004152\|Ga0062386_100419633	Not Available	1079	Open in IMG/M
3300004152\|Ga0062386_100717252	Not Available	821	Open in IMG/M
3300005591\|Ga0070761_10331993	Not Available	919	Open in IMG/M
3300005712\|Ga0070764_10006428	All Organisms → cellular organisms → Bacteria	5620	Open in IMG/M
3300009623\|Ga0116133_1024619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1489	Open in IMG/M
3300009762\|Ga0116130_1097966	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB3 → candidate division KSB3 bacterium	920	Open in IMG/M
3300010339\|Ga0074046_10427435	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300014151\|Ga0181539_1207556	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300014160\|Ga0181517_10172404	Not Available	1201	Open in IMG/M
3300014162\|Ga0181538_10294990	Not Available	882	Open in IMG/M
3300014167\|Ga0181528_10006528	All Organisms → cellular organisms → Bacteria	7056	Open in IMG/M
3300014167\|Ga0181528_10009869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	5690	Open in IMG/M
3300014167\|Ga0181528_10013659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4808	Open in IMG/M
3300014167\|Ga0181528_10252904	Not Available	951	Open in IMG/M
3300014199\|Ga0181535_10062112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2520	Open in IMG/M
3300014201\|Ga0181537_10016263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5348	Open in IMG/M
3300014491\|Ga0182014_10617771	Not Available	521	Open in IMG/M
3300014492\|Ga0182013_10001603	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	30670	Open in IMG/M
3300014492\|Ga0182013_10007486	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12021	Open in IMG/M
3300014492\|Ga0182013_10593027	Not Available	565	Open in IMG/M
3300014493\|Ga0182016_10013641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	7673	Open in IMG/M
3300014493\|Ga0182016_10074029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	2512	Open in IMG/M
3300014493\|Ga0182016_10247077	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1120	Open in IMG/M
3300014495\|Ga0182015_10110113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1903	Open in IMG/M
3300014495\|Ga0182015_10247007	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1179	Open in IMG/M
3300014495\|Ga0182015_10387463	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300014499\|Ga0182012_10023782	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5402	Open in IMG/M
3300014499\|Ga0182012_10189168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1452	Open in IMG/M
3300014501\|Ga0182024_10001053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	71584	Open in IMG/M
3300014501\|Ga0182024_10001448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	61175	Open in IMG/M
3300014501\|Ga0182024_10167605	All Organisms → cellular organisms → Bacteria	3055	Open in IMG/M
3300014501\|Ga0182024_11000751	Not Available	997	Open in IMG/M
3300014655\|Ga0181516_10662279	Not Available	540	Open in IMG/M
3300014838\|Ga0182030_10075498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4934	Open in IMG/M
3300014838\|Ga0182030_10250445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2025	Open in IMG/M
3300014838\|Ga0182030_10767515	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300014838\|Ga0182030_11507831	Not Available	554	Open in IMG/M
3300017940\|Ga0187853_10032492	All Organisms → cellular organisms → Bacteria	2780	Open in IMG/M
3300017946\|Ga0187879_10393404	Not Available	768	Open in IMG/M
3300017948\|Ga0187847_10100855	Not Available	1593	Open in IMG/M
3300017988\|Ga0181520_10212480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1510	Open in IMG/M
3300018044\|Ga0187890_10587771	Not Available	627	Open in IMG/M
3300019242\|Ga0181502_1302880	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300019256\|Ga0181508_1634617	Not Available	835	Open in IMG/M
3300019787\|Ga0182031_1121855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1671	Open in IMG/M
3300019787\|Ga0182031_1141162	Not Available	1055	Open in IMG/M
3300019787\|Ga0182031_1289354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2033	Open in IMG/M
3300021181\|Ga0210388_11131323	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300021433\|Ga0210391_10964503	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300022850\|Ga0224552_1065733	Not Available	516	Open in IMG/M
3300023091\|Ga0224559_1004664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6530	Open in IMG/M
3300024295\|Ga0224556_1076642	Not Available	820	Open in IMG/M
3300027604\|Ga0208324_1214223	Not Available	507	Open in IMG/M
3300027853\|Ga0209274_10049185	All Organisms → cellular organisms → Bacteria	1998	Open in IMG/M
3300027879\|Ga0209169_10006700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6612	Open in IMG/M
3300028552\|Ga0302149_1012231	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2276	Open in IMG/M
3300028552\|Ga0302149_1203728	Not Available	518	Open in IMG/M
3300028560\|Ga0302144_10313039	Not Available	508	Open in IMG/M
3300028565\|Ga0302145_10031535	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1909	Open in IMG/M
3300028565\|Ga0302145_10185758	Not Available	696	Open in IMG/M
3300028566\|Ga0302147_10059865	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300028746\|Ga0302233_10336907	Not Available	570	Open in IMG/M
3300028746\|Ga0302233_10395985	Not Available	523	Open in IMG/M
3300028747\|Ga0302219_10367200	Not Available	562	Open in IMG/M
3300028759\|Ga0302224_10091299	Not Available	1167	Open in IMG/M
3300028779\|Ga0302266_10068720	Not Available	1519	Open in IMG/M
3300028779\|Ga0302266_10325853	Not Available	558	Open in IMG/M
3300028798\|Ga0302222_10175499	Not Available	842	Open in IMG/M
3300028860\|Ga0302199_1026728	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2120	Open in IMG/M
3300028909\|Ga0302200_10198301	Not Available	1008	Open in IMG/M
3300029817\|Ga0247275_1007766	All Organisms → cellular organisms → Bacteria → Proteobacteria	4463	Open in IMG/M
3300029883\|Ga0311327_10171392	Not Available	1515	Open in IMG/M
3300029883\|Ga0311327_10359005	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300029907\|Ga0311329_10179020	Not Available	1646	Open in IMG/M
3300029908\|Ga0311341_10716790	Not Available	557	Open in IMG/M
3300029911\|Ga0311361_11015912	Not Available	692	Open in IMG/M
3300029914\|Ga0311359_11064690	Not Available	540	Open in IMG/M
3300029919\|Ga0302141_1079698	Not Available	884	Open in IMG/M
3300029939\|Ga0311328_10971075	Not Available	555	Open in IMG/M
3300029943\|Ga0311340_11183586	Not Available	616	Open in IMG/M
3300029951\|Ga0311371_10506794	Not Available	1590	Open in IMG/M
3300029952\|Ga0311346_11338024	Not Available	547	Open in IMG/M
3300029952\|Ga0311346_11513283	Not Available	501	Open in IMG/M
3300029955\|Ga0311342_10637114	Not Available	855	Open in IMG/M
3300029955\|Ga0311342_10897713	Not Available	670	Open in IMG/M
3300029982\|Ga0302277_1085730	Not Available	1406	Open in IMG/M
3300030004\|Ga0302186_10293173	Not Available	544	Open in IMG/M
3300030007\|Ga0311338_10337053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1648	Open in IMG/M
3300030007\|Ga0311338_11207237	Not Available	717	Open in IMG/M
3300030011\|Ga0302270_10134694	Not Available	1504	Open in IMG/M
3300030051\|Ga0302195_10331260	Not Available	669	Open in IMG/M
3300030399\|Ga0311353_10225027	All Organisms → cellular organisms → Bacteria	1750	Open in IMG/M
3300030399\|Ga0311353_10763838	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300030503\|Ga0311370_10383980	Not Available	1773	Open in IMG/M
3300030507\|Ga0302192_10353746	Not Available	605	Open in IMG/M
3300030507\|Ga0302192_10390282	Not Available	570	Open in IMG/M
3300030518\|Ga0302275_10475892	Not Available	633	Open in IMG/M
3300030519\|Ga0302193_10188234	Not Available	1165	Open in IMG/M
3300030519\|Ga0302193_10571818	Not Available	549	Open in IMG/M
3300030520\|Ga0311372_11638493	Not Available	781	Open in IMG/M
3300030578\|Ga0210275_10185938	Not Available	656	Open in IMG/M
3300030580\|Ga0311355_10603239	Not Available	1036	Open in IMG/M
3300030677\|Ga0302317_10338810	Not Available	669	Open in IMG/M
3300030688\|Ga0311345_10112236	All Organisms → cellular organisms → Bacteria	3056	Open in IMG/M
3300030693\|Ga0302313_10242038	Not Available	723	Open in IMG/M
3300030738\|Ga0265462_10838622	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300031233\|Ga0302307_10367482	Not Available	733	Open in IMG/M
3300031261\|Ga0302140_10009965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11764	Open in IMG/M
3300031524\|Ga0302320_10507313	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1457	Open in IMG/M
3300031708\|Ga0310686_103144491	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7442	Open in IMG/M
3300031708\|Ga0310686_111812007	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300031708\|Ga0310686_118016325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4330	Open in IMG/M
3300031708\|Ga0310686_119347962	Not Available	554	Open in IMG/M
3300031708\|Ga0310686_119498857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21400	Open in IMG/M
3300031788\|Ga0302319_10255572	All Organisms → cellular organisms → Bacteria	2116	Open in IMG/M
3300033405\|Ga0326727_10066253	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5304	Open in IMG/M
3300033405\|Ga0326727_10666269	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300033887\|Ga0334790_208438	Not Available	557	Open in IMG/M
3300034065\|Ga0334827_053816	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1470	Open in IMG/M
3300034124\|Ga0370483_0317674	Not Available	538	Open in IMG/M
3300034163\|Ga0370515_0433455	Not Available	555	Open in IMG/M
3300034199\|Ga0370514_128516	Not Available	651	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.75%
Aquatic	Environmental → Aquatic	18.25%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	47.62%
Soil	Environmental → Terrestrial → Soil	34.13%
Freshwater	Environmental → Aquatic → Freshwater	18.25%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	47.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	21.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	9.52%
Loam	Environmental → Terrestrial → Soil → Loam	3.17%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	47.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	18.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.17%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.59%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	28.57%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.49%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	12.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.97%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.97%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.17%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.17%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.17%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.38%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.38%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.59%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.59%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022850	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 1-5	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028565	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300030004	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_1	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030578	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO105-VCO054SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101903972	3300000567	Peatlands Soil	MLELDQKVIVITEKGIAYEGFVLARASGENGTAAYKIGLEGAGFNQPGQWHKACDVFVEEPAKE*
Ga0062389_1002312101	3300004092	Bog Forest Soil	MLDLNQTVIVITDKGVAYEGFILGRATGEDGTGAYRIGIEGAGSEQQGQWHKAADIFVPEAVKDEDL*
Ga0062386_1002723022	3300004152	Bog Forest Soil	MLDLNQNVIVINAKGVTYEGYIMQRATGEDGASAYRVGLEGAGFEQQGQWHKSCDVFVPEPLKEEPI*
Ga0062386_1004196332	3300004152	Bog Forest Soil	MLDLNQSVIVIADKGITYEGYIMARASGENGASAYRIGLEGAGFEQQGQWHKSSDVFVPEPVKDDAI*
Ga0062386_1007172521	3300004152	Bog Forest Soil	MFDLGQRVIVITDKVSYEGVILARASGDDGQGAYKIALHGGGLDQAGQWHKAGDVFVQEPAPPEPELSFEDSAKL
Ga0070761_103319932	3300005591	Soil	MLELNQTVIVITEKGVTYEGFILARASGEDGPGAYKIGLEGAGFEQQGQWHKAGDIFVPEPVKEDDL*
Ga0070764_100064284	3300005712	Soil	MLDLNQTVIVITDKVTYEGFIMARATGEDGASAYRIGLEGAGFEQQGQWHKTGDIFVPEVAKEEQP*
Ga0116133_10246192	3300009623	Peatland	MLDLNQNVIVINEKGVAYEGYIMQRAAGENGAGAYRVGLVGAGFEQQGQWHKSCDVFVPEPIEEEPI*
Ga0116130_10979661	3300009762	Peatland	VFELDQKVVVITGKGIAYEGFILACGKADDGSGAYKIGLEGAGFEQPGQWHKACDVFLEEPTREKEPYSSEPSWNDSPR*
Ga0074046_104274352	3300010339	Bog Forest Soil	AEPKKHWNRKETAMLDLNQNVIVITEKGVTYEGYIMQRASSEDGASAYRIGLEGAGFEQLGQWHKAGDVFVPESIKEETI*
Ga0181539_12075562	3300014151	Bog	MFELDQKVVVITGKGIAYEGFILARGKADDGSGAYKIGLEGAGFEQPGQWHKACDVFLEEPTREKEPYSSEPSWNDSPR*
Ga0181517_101724041	3300014160	Bog	MLDLNQSVIVITDKGIAYEGFVLARATGENGATAYRIGLEGAGFGQQGQWHKACDVFVTEPIKEPAL*
Ga0181538_102949902	3300014162	Bog	MLDLDQRVVVITEKGIAYDGFILARAMGDDGSRAYRIGLEGAGFGQQGQWHKASDVFVAEPTKEEAEYSPVPPTKP*
Ga0181528_100065287	3300014167	Bog	LAVLELNQSVIVISDKGVTYEGYVMARASGENGAAAYRIGLEGAGFGQQGQWHKSHDVFVQEPKRKDDE*
Ga0181528_100098694	3300014167	Bog	VLDLTQTVIVITDKGVAYEGFILERATGEGGANAYRIGLEGAGSGQTGQWHKAGDVFVPEPVKEDAL*
Ga0181528_100136592	3300014167	Bog	MLELDQKVIVITEKGVVYDGFILARASGEAGAAAYKIGLEGAGITQPGQWHKACDVFVEEAAKE*
Ga0181528_102529041	3300014167	Bog	FMLELNQSVIVINDKGIAYEGYIMARASGENGTAAYKIGLEGAGFEQQGQWHKSDDVFVRELLKDDPV*
Ga0181535_100621123	3300014199	Bog	LDLNQSVIVITDKGIAYEGFVLARATGENGATAYRIGLEGAGFGQQGQWHKACDVFVTEPIKEPAL*
Ga0181537_100162632	3300014201	Bog	MLDLNQTVIVITEKGLTYAGYVMARANGDNASAAYKIGLEGAGAEQPGQWHKSSDVFVPETS*
Ga0182014_106177711	3300014491	Bog	CFRKAQERRNFAMLELNQSVIVITEKGIAYEGFVLARATGENGVGAYRVGLEGAGLEQQGQWHKSSDVFVLEPVKEDAL*
Ga0182013_100016037	3300014492	Bog	MFEINQTVIVITEKGVAYDGFVMARASGENGSAAYRIGLEGAGYEQQGQWHKAGDVFVREPVKEEVL*
Ga0182013_100074867	3300014492	Bog	MLDLSHSVIVINEKGVAYEGYIMQRAAGENGTSAYRIGLEGAGFEQQGQWHKASDVFVPEPLKEDAL*
Ga0182013_105930271	3300014492	Bog	MLELNQSVIVITEKGIAYEGFVLARATGENGVGAYRVGLEGAGLEQQGQWHKSSDVFVLEPVKEDAL*
Ga0182016_100136411	3300014493	Bog	MLDLNQSVIVINEKGVTYEGYIMQRAAGENGANAYRIGLEGAGFEQQGQWHKAGDVFLPEPLKKDEL*
Ga0182016_100740294	3300014493	Bog	MLDLNQNVIVINEKGVAYEGYIMQRAAGENGAGAYRVGLIGAGFEQQGQWHKSCDVF
Ga0182016_102470772	3300014493	Bog	MLDLNQNVIVISEKGVAYEGYIMQRAAGENGASAYMVGLEGAGFEQQGQWHKSCDVFVPEPLKEEPI*
Ga0182015_101101132	3300014495	Palsa	MLELNQSVIVITEKGVAYDGYVMARASGENGSAAYQIGLEGAGAEQPGQWHKSSDVFVPEPI*
Ga0182015_102470072	3300014495	Palsa	MLDLNQSVIVIADKGVTYEGYIMARATGENGSGAYKIGLEGAGFAQQGQWHKASDVFVQEPIKEDGI*
Ga0182015_103874631	3300014495	Palsa	MLDLNQSVIIISEKGIAYEGYIMQRASGEDGANAYKIGVEGAGFQQQGQWHKADDVFIPEPLKEDAS*
Ga0182012_100237822	3300014499	Bog	LDVLDLNQTVIVIGEKGVTYEGYVMERASGDNGAAAYRIGLEGAGFEQLGQWHRSSDVFVPEPAKEDAV*
Ga0182012_101891681	3300014499	Bog	MLELNQSVIVIADKGLTYEGYIMARASGENGASAYRIGLEGAGFEQQGQWHKASDV
Ga0182024_1000105357	3300014501	Permafrost	MFELNQTVIVITEKGLTYDGFILARATGEDGKGAYKIGLEGAGFEQPGQWHKADDVFAPEPKNKDDL*
Ga0182024_100014487	3300014501	Permafrost	MLDLNQSVIVITEKGLVYEGYVMARASGENGAAAYKIGLKGAGPGQAGQWHKADDVFVTEAIKEETA*
Ga0182024_101676056	3300014501	Permafrost	MFDLNQTVIVITEKGVAYEGFILARATGEDGTGAYKIGLEGAGFEQPGQWHKAGDVFVPEPVKEDDL*
Ga0182024_110007512	3300014501	Permafrost	MLDLNQSVIVISDKGITYEGYIMARASGEDGASAYKIGLEGAGFEQQGQWHKAGDVFIPEPVKEDAL*
Ga0181516_106622791	3300014655	Bog	MLDLDQKVIVITEKGVVYDGFILARASGEAGAAAYKIGLEGAGITQPGQWHKACDVFVEEAAKE*
Ga0182030_100754986	3300014838	Bog	MLELNQSVIVIADKGLTYEGYIMARASGENGASAYRIGLEGAGFEQQGQWHKASDVFLPEPLKEDAL*
Ga0182030_102504453	3300014838	Bog	MLDLNQNVIVINEKGVAYEGYIMQRAAGENGAGAYRVGLIGAGFEQQGQWHKSCDVFVPEPIEEEPI*
Ga0182030_107675152	3300014838	Bog	MLDLNQSVIVISDKGITYEGYIMARASGENSASAYKIGLEGAGFEQQGQWHKASDVFVPEPLKEDGL*
Ga0182030_115078312	3300014838	Bog	VIVITEKGIAYEGFVLARATGENGVGAYRVGLEGAGLEQQGQWHKSSDVFVLEPVKEDAL
Ga0187853_100324924	3300017940	Peatland	VFELDQKVVVITGKGIAYEGFILACGKADDGSGAYKIGLEGAGFEQPGQWHKACDVFLEEPTREKEPYSSEPSWNDSPR
Ga0187879_103934042	3300017946	Peatland	MFEINQTVIVITEKGVAYDGFVMARASGENGSAAYRIGLEGAGYEQQGQWHKAGDVFVREPVKEEVL
Ga0187847_101008551	3300017948	Peatland	MFELEQRVVVITDKGIAFDGFIIARATGDDGSRAYRVCLEGAGLGQQGQWHKASEVFVAEPIKLEDPYATEPPQEP
Ga0181520_102124802	3300017988	Bog	MLDLNQSVIVITDKGIAYEGFVLARATGENGATAYRIGLEGAGFGQQGQWHKACDVFVTEPIKEPAL
Ga0187890_105877711	3300018044	Peatland	MLDLNQNVIVISEKGVAYEGYIMQRAAGENGASAYRVGLEGAGFEQQGQWHKSCDVFVPEPIEEEPI
Ga0181502_13028803	3300019242	Peatland	MLDLNQSVIVITDKGIAYEGFVLARATGENGATAYRIGLEGAGFGQQGQWHKACDVFVTEPIK
Ga0181508_16346171	3300019256	Peatland	VLDLTQTVIVITDKGVAYEGFILERATGEGGANAYRIGLEGAGSGQTGQWHKAGDVFVPEPVKEDAL
Ga0182031_11218552	3300019787	Bog	MLDLNQNVIVINEKGVAYEGYIMQRAAGENGAGAYRVGLIGAGFEQQGQWHKSCDVFVPEPIEEEPI
Ga0182031_11411622	3300019787	Bog	INEKGVAYEGYIMQRAAGENGAGAYRVGLIGAGFEQQGQWHKSCDVFVPEPIEEEPI
Ga0182031_12893546	3300019787	Bog	MLDLNQNVIVINEKGVAYEGYIMQRAAGENGAGAYRVGLIGAGFEQQGQWHKSCD
Ga0210388_111313232	3300021181	Soil	MFDLNQSVIVITDKGLTYEGFIMARASGEDGPAAYKIGLEGAGFEQQGQWHKACDVFVPEPVKRE
Ga0210391_109645031	3300021433	Soil	MLELNQSVIVITEKGLVYDGYVMARASGENGAAAYRVGLEGAGAGQPGQWHKSSDVFVPEPVKVEAE
Ga0224552_10657331	3300022850	Soil	DSIMFEINQTVIVITEKGVAYDGFVMARASGENGSAAYRIGLEGAGYEQQGQWHKAGDVFVREPVKEEVL
Ga0224559_10046642	3300023091	Soil	MFDLNQNVVVITEKGISYEGFVLERATGDNGAGAYRIGLEGAGLEQQGQWHKATDVFVPEPVKGDAL
Ga0224556_10766422	3300024295	Soil	MLDLNQSVIVISDKGITYEGYIMARASGENSASAYKIGLEGAGFEQQGQWHKASDVFVPEPLKEDGL
Ga0208324_12142231	3300027604	Peatlands Soil	MLELDQKVIVITEKGIAYEGFVLARASGENGTAAYKIGLEGAGFNQPGQWHKACDVFVEEPAKE
Ga0209274_100491851	3300027853	Soil	MLELNQTVIVITEKGVTYEGFILARASGEDGPGAYKIGLEGAGFEQQGQWHKAGDIFVPEPVKEDDL
Ga0209169_100067004	3300027879	Soil	MLDLNQTVIVITDKVTYEGFIMARATGEDGASAYRIGLEGAGFEQQGQWHKTGDIFVPEVAKEEQP
Ga0302149_10122312	3300028552	Bog	MLDLNQIVIVINEKGVTYEGYIMQRAAGEDGANAYKIGLEGAGFQQQGQWHKAADVFVPEPIKEESS
Ga0302149_12037281	3300028552	Bog	VLDLNQTVIVIGEKGVTYEGYVMERATGDNGSAAYRIGLEGAGFEQQGQWHRSSDVYVPEPEKEDAV
Ga0302144_103130391	3300028560	Bog	VLDLNQTVIVIGEKGVTYEGYVMERASGDNGAAAYRIGLEGAGFEQLGQWHRSSDVFVPEPAKEDAV
Ga0302145_100315352	3300028565	Bog	MLDLSHSVIVINEKGVAYEGYIMQRAAGENGTSAYRIGLEGAGFEQQGQWHKASDVFVPEPLKEDAL
Ga0302145_101857582	3300028565	Bog	MLDLDQKVIVITDKGLAYEGFITARASGEDGASAYRIGLDGAGPSQVGQWHKAGDVFVQEASSE
Ga0302147_100598653	3300028566	Bog	MFEINQTVIVITEKGVAYDGFVMARASGENGSAAYRIGLEGAGYEQQGQWHKAGDVFV
Ga0302233_103369072	3300028746	Palsa	MLDLNQSVIVISDKGITYDGYIMARAAGEDGANAYRIGLEGAGFDQQGQWHKAADVFVAEPRK
Ga0302233_103959852	3300028746	Palsa	MLELDQSVIVINDKGVAYEGYIMARATGENATAAYKIGLDGAGLEQQGQWHKSGDVFVPEPKKEDA
Ga0302219_103672001	3300028747	Palsa	MLDLNQSVIVIADKGVTYEGYIMARATGENGSGAYKIGLEGAGFAQQGQWHKASDVFVQEPIKEDGI
Ga0302224_100912991	3300028759	Palsa	MLDLNQSVIVIADKGITYEGYIMARATGEDGASAYRIGLEGAGFEQQGQWHKSSDVFLPEPVKKDDRI
Ga0302266_100687201	3300028779	Bog	MFEINQTVIVITEKGVAYDGFVMARASGENGSAAYRIGLEGAGYEQQGQWHKAGDVFVREPAKEEVL
Ga0302266_103258531	3300028779	Bog	MLDLNQNVIVISDKGITYEGYIMARASGENGASAYKIGLEGAGFGQQGQWHKSSDVFVPEPVKDDAI
Ga0302222_101754992	3300028798	Palsa	MLDLNQSVIVISDKGITYDGYIMARAAGEDGANAYRIGLEGAGFDQQGQWHKAADVFVAEPRKEDVL
Ga0302199_10267281	3300028860	Bog	MLDLSHSVIVINEKGVAYEGYIMQRAAGENGTSAYRIGLEGAGFEQQGQWHKASDVFVPEPLKED
Ga0302200_101983012	3300028909	Bog	QNVIVINEKGVAYEGYIMQRAAGENGAGAYRVGLIGAGFEQQGQWHKSCDVFVPEPIEEEPI
Ga0247275_10077661	3300029817	Soil	MLDLDQRVVVITEKGIAYDGFILARAMGDDGSRAYRIGLEGAGFGQQGQWHKASDVFVAEPTKEEAEYSPVPPTKP
Ga0311327_101713922	3300029883	Bog	MDVLDLNQTVIVIGEKGVTYEGYVMERATGDNGSAAYRIGLEGAGFEQQGQWHRSSDVYVPEPEKEDAV
Ga0311327_103590052	3300029883	Bog	MLDLNQSVIVIADKGITYEGYIMARATGENGASAYRIGLEGAGFEQQGQWHKASDVFVPEPVKADVT
Ga0311329_101790202	3300029907	Bog	SIMFEINQTVIVITEKGVAYDGFVMARASGENGSAAYRIGLEGAGYEQQGQWHKAGDVFVREPVKEEVL
Ga0311341_107167901	3300029908	Bog	VIGEKGVTYEGYVMERATGDNGSAAYRIGLEGAGFEQQGQWHRSSDVYVPEPEKEDAV
Ga0311361_110159122	3300029911	Bog	RKEPAMLDLNQSVIVIADKGITYEGYIMARATGENGASAYRIGLEGAGFEQQGQWHKASDVFVPEPVKADVT
Ga0311359_110646901	3300029914	Bog	MLDLNQSVIVIADKGITYEGYIMARATGENGASAYRIGLEGAGFEQQGQWHKASDVFVPE
Ga0302141_10796982	3300029919	Bog	LDVLDLNQTVIVIGEKGVTYEGYVMERASGDNGAAAYRIGLEGAGFEQLGQWHRSSDVFVPEPAKEDAV
Ga0311328_109710751	3300029939	Bog	VLDLNQTVIVIGEKGVTYEGYVMERATGDNGSAAYRIGLEGAGFEQQGQWHRSSDVYV
Ga0311340_111835861	3300029943	Palsa	LNQSVIVITEKGVAYDGYVMARASGENGSAAYQIGLEGAGAEQPGQWHKSSDVFVPEPI
Ga0311330_105076541	3300029945	Bog	VLDLNQTVIVIGEKGVTYEGYVMERASGDNGSAAYRIGLEGAGLDQQGQWHRS
Ga0311371_105067942	3300029951	Palsa	MLEINQNVIVITEKGIAYEGYIMARGTGENGAAAYKIGVEGAGFEQQGQWHKACDVFVAEPAKEDGQ
Ga0311346_113380242	3300029952	Bog	MLELNQNVIVIADKGMSYEGYIMARATGEDGSGAYRIGVEGAGIEQQGQWHKASDVFIPEPVKE
Ga0311346_115132831	3300029952	Bog	MLELNQNVIVIADKNLTYEGYIMARATGEAGAMAYRIGLEGAGFEQQGQWHKGSDVFIPEPRKEDEL
Ga0311342_106371141	3300029955	Bog	RKTAMLELNQSVIVIADKGLTYEGYIMARASGENGASAYRIGLEGAGFEQQGQWHKASDVFLPEPLKEDAL
Ga0311342_108977131	3300029955	Bog	VLDLNQTVIVIGEKGVTYEGYVMERASGDNGSAAYRIGLEGAGLDQQGQWHRSSDVFVPEPA
Ga0302277_10857302	3300029982	Bog	LDLNQTVIVIGEKGVTYEGYVMERASGDNGAAAYRIGLEGAGFEQLGQWHRSSDVFVPEPAKEDAV
Ga0302186_102931731	3300030004	Bog	ISDKGITYEGYIMARASGENGASAYKIGLEGAGFGQQGQWHKSSDVFVPEPVKDDAI
Ga0311338_103370532	3300030007	Palsa	MLELNQSVIVITEKGVSYDGYVMARASGENGSAAYQIGLEGAGAEQPGQWHKSSDVFVPEPI
Ga0311338_112072371	3300030007	Palsa	MFELNQTVIVITDKGVAYAGYIMARASGEDGASAYKIGLEGAGFEQQGQWHKASDIFVPEAREEDAS
Ga0302270_101346942	3300030011	Bog	EINQTVIVITEKGVAYDGFVMARASGENGSAAYRIGLEGAGYEQQGQWHKAGDVFVREPVKEEVL
Ga0302195_103312601	3300030051	Bog	MLELNQSVIVIADKGLTYEGYVMARATGDGGGMAYRIGLEGAGFEQQGQWHKGSDVFVPEPRKEDEL
Ga0311353_102250274	3300030399	Palsa	MLELNQSVIVITEKGVAYDGYVMARASGENGSAAYQIGLEGAGAEQPGQWHKSSDVFVPEPI
Ga0311353_107638381	3300030399	Palsa	MFDLNQTVIVITEKGLAYEGFILARASGEDGAGAYKIGLEGAGFEQQGQWHKAGDIFVPEPVKEDNL
Ga0311370_103839804	3300030503	Palsa	MLDLNQSVIVIADKGITYEGYIMARATGEDGASAYRIGLEGAGFEQQGQWHKSSDVFVPEPVKKDDRI
Ga0302192_103537461	3300030507	Bog	YFGEDLDVLDLNQTVIVIGEKGVTYEGYVMERASGDNGSAAYRIGLEGAGLDQQGQWHRSSDVFVPEPAKEDAI
Ga0302192_103902822	3300030507	Bog	MLELNQSVIVIADKGLTYEGYIMARASGENGASAYRIGLEGAGFEQQGQWHKAS
Ga0302275_104758921	3300030518	Bog	VLDLNQTVIVIGEKGVTYEGYVMERASGDNGSAAYRIGLEGAGLDQQGQWHRSSDVFVPEPAKEDAI
Ga0302193_101882341	3300030519	Bog	NQSVIVIADKGLTYEGYVMARATGDGGGMAYRIGLEGAGFEQQGQWHKGSDVFVPEPRKEDEL
Ga0302193_105718181	3300030519	Bog	VLDLNQTVIVIGEKGVTYEGYVMERASGDNGSAAYRIGLEGAGLDQQGQWHRSSDVFV
Ga0311372_116384931	3300030520	Palsa	MLEINQGVIVITEKGIAYEGYIMARGTGENGAAAYKIGVEGAGFEQQGQWHKACDVFVAEPAKEDGQ
Ga0210275_101859381	3300030578	Soil	MFDLNQTVVVITGKGLAYEGFILARASGEDGRGAYKIGLEGAGFEQQGQWHKACDVFVPEPAKDKDI
Ga0311355_106032393	3300030580	Palsa	MLDLNQSVIVIADKGITYEGYIMARATGEDGASAYRIGLEGAGFEQQGQWHKSSDVFVPEPVKKDERI
Ga0302317_103388102	3300030677	Palsa	IADKGVTYEGYIMARATGENGSGAYKIGLEGAGFAQQGQWHKASDVFVQEPIKEDGI
Ga0311345_101122364	3300030688	Bog	MLELNQSVIVIADKGLTYEGYVMARATGDSGGIAYRIGLEGAGFEQQGQWHKGSDVFVPEPRKEDEL
Ga0302313_102420382	3300030693	Palsa	MLDLNQSVIVIADKGITYEGYIMARATGEDGASAYRIGLEGAGFEQQGQWHKSSDVFVPEPVKKDD
Ga0265462_108386221	3300030738	Soil	MFDLNQTVIVITEKGVAYEGFILARATGEDGRGAYKIGLEGAGFEQPDQWHKAGDVFVPEPVKKDDL
Ga0302307_103674822	3300031233	Palsa	LNQSVIVIADKGITYEGYIMARATGEDGASAYRIGLEGAGFEQQGQWHKSSDVFLPEPVKKDDRI
Ga0302140_1000996510	3300031261	Bog	MLDLNQNVIVISDKGITYEGYIMARASGENGASAYKIGLEGAGFGQQGQWHKASDVFVPEPVKDDAI
Ga0302320_105073132	3300031524	Bog	MLELNQSVIVIADKGMSYEGYIMARATGEDGSGAYRIGVEGAGIEQQGQWHKASDVFIPEPVKEDAL
Ga0310686_1031444913	3300031708	Soil	MLEVNQTVIVITDKGVAYEGYIMARATGEDGASAYRIGVEGAGFEQQGQWHKTSDIFVPEPTKEDAV
Ga0310686_1118120073	3300031708	Soil	MLELNQSVIVITEKGLVYDGYVMARASGENGAAAYRVGLEGAGAGQPGQWHKSSDVFVPEPVKDEAA
Ga0310686_1180163253	3300031708	Soil	MLDLNQSVIVISDKGITYEGYIMARASGEDGASAYKIGLEGAGFEQQGQWHKAGDVFIPEPVKEDAL
Ga0310686_1193479621	3300031708	Soil	MLELNQSVIVISEKGITYAGYIMARATGENGVGAYRIGMEGAGFEQLGQWHKAGDVFVPEPVKRDAL
Ga0310686_11949885715	3300031708	Soil	MLDLNQTVIVITDKGVTYEGYIMARASGEDGASAYRIGLEGAGFAQQGQWHKASDVFVPEPTKDEEI
Ga0302319_102555721	3300031788	Bog	MLELNQSVIVIADKGLTYEGYVMARATGDSGGMAYRIGLEGAGFEQQGQWHKGSDVFVPEPRKEDEL
Ga0326727_100662534	3300033405	Peat Soil	MLDLNQSVIVISDKGITYEGYIMARASGENSASAYKIGLEGAGFEQQGQWHKASDVFVPEPLKQDGL
Ga0326727_106662692	3300033405	Peat Soil	MLDLNQNVIVINAKGVTYEGYIMQRATGEDGASAYRVGLEGAGFEQQGQWHKSCDVFVPEPLKEEPI
Ga0334790_208438_332_535	3300033887	Soil	MLDLNQSVIVIADKGITYEGYIMARATGENGTGAYKIGLEGAGFAQQGQWHKASDVFVQEPVKDDGI
Ga0334827_053816_1250_1453	3300034065	Soil	MLDLNQNVIVISEKGVAYEGYIMQRAAGENGASAYMVGLEGAGFEQQGQWHKSCDVFVPEPLKEEPI
Ga0370483_0317674_361_537	3300034124	Untreated Peat Soil	MFEINQTVIVITEKGVAYDGFVMARASGENGSAAYRIGLEGAGYEQQGQWHKAGDVFVR
Ga0370515_0433455_158_361	3300034163	Untreated Peat Soil	MLDLNQNVIVIADKGITYEGYIMARATGENGASAYRIGLEGAGFEQQGQWHKASDVFVPEPVKDDAI
Ga0370514_128516_477_650	3300034199	Untreated Peat Soil	QSVIVITEKGVAYDGYVMARASGENGSAAYQIGLEGAGAEQPGQWHKSSDVFVPEPI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066362

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences