Metagenome Family F066499

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066499
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	65 residues
Representative Sequence	MDQHENLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAIREINAQITELVSSH
Number of Associated Samples	52
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.02 %
% of genes near scaffold ends (potentially truncated)	20.63 %
% of genes from short scaffolds (< 2000 bps)	84.92 %
Associated GOLD sequencing projects	51
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.175 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (56.349 % of family members)
Environment Ontology (ENVO)	Unclassified (56.349 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.016 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.89% β-sheet: 0.00% Coil/Unstructured: 41.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.2.5.1: Prefoldin	d1fxkc_	1fxk	0.89207
a.25.1.1: Ferritin	d1nfva_	1nfv	0.84598
c.3.1.2: FAD-linked reductases, N-terminal domain	d2dw4a2	2dw4	0.83697
a.7.7.1: BAG domain	d3ldqb1	3ldq	0.83189
a.25.1.1: Ferritin	d1z6om1	1z6o	0.83032

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF00877	NLPC_P60	2.38
PF01555	N6_N4_Mtase	1.59
PF01255	Prenyltransf	1.59
PF13481	AAA_25	0.79
PF00582	Usp	0.79
PF13730	HTH_36	0.79
PF12680	SnoaL_2	0.79
PF00353	HemolysinCabind	0.79
PF05899	Cupin_3	0.79
PF04072	LCM	0.79
PF05974	DUF892	0.79
PF00313	CSD	0.79
PF00004	AAA	0.79
PF02517	Rce1-like	0.79
PF01547	SBP_bac_1	0.79
PF13358	DDE_3	0.79
PF03006	HlyIII	0.79
PF09954	DUF2188	0.79
PF07366	SnoaL	0.79
PF04760	IF2_N	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	2.38
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	1.59
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.59
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.59
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.59
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.79
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.79
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.17 %
All Organisms	root	All Organisms	46.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.17 %
cellular organisms	root	All Organisms → cellular organisms	43.65 %
Viruses	superkingdom	All Organisms → Viruses	3.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.17 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.17 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	31.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.17 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	31.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.79 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.79 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.17 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	31.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Reticulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Thermoactinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.17 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	19.84 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	5.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Novibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae → Novibacillus	0.79 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	0.79 %
Reticulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.17 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	19.84 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	5.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Novibacillus thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae → Novibacillus → Novibacillus thermophilus	0.79 %
Reticulibacter mediterranei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	0.79 %
Rubrobacter radiotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2119805009\|FNTS007_GKN1E7E02J2JNQ	Not Available	530	Open in IMG/M
3300000789\|JGI1027J11758_13079062	Not Available	801	Open in IMG/M
3300000953\|JGI11615J12901_10990816	Not Available	807	Open in IMG/M
3300005562\|Ga0058697_10323856	Not Available	742	Open in IMG/M
3300005562\|Ga0058697_10803313	Not Available	509	Open in IMG/M
3300006918\|Ga0079216_11328596	Not Available	589	Open in IMG/M
3300006918\|Ga0079216_11539229	Not Available	559	Open in IMG/M
3300007004\|Ga0079218_12040388	Not Available	657	Open in IMG/M
3300007790\|Ga0105679_10156980	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2360	Open in IMG/M
3300007790\|Ga0105679_10263344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2156	Open in IMG/M
3300007790\|Ga0105679_10535984	Not Available	1275	Open in IMG/M
3300007790\|Ga0105679_10923953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1440	Open in IMG/M
3300009789\|Ga0126307_10030651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	4133	Open in IMG/M
3300009789\|Ga0126307_10036350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	3810	Open in IMG/M
3300009789\|Ga0126307_10064345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2879	Open in IMG/M
3300009789\|Ga0126307_10097195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2331	Open in IMG/M
3300009789\|Ga0126307_10098378	All Organisms → Viruses → Predicted Viral	2318	Open in IMG/M
3300009789\|Ga0126307_10108545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2203	Open in IMG/M
3300009789\|Ga0126307_10174075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1725	Open in IMG/M
3300009789\|Ga0126307_10271459	Not Available	1364	Open in IMG/M
3300009789\|Ga0126307_10378126	Not Available	1141	Open in IMG/M
3300009789\|Ga0126307_10488601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	993	Open in IMG/M
3300009789\|Ga0126307_10602331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	887	Open in IMG/M
3300009789\|Ga0126307_10615732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	876	Open in IMG/M
3300009789\|Ga0126307_11308607	Not Available	587	Open in IMG/M
3300009840\|Ga0126313_10064297	All Organisms → cellular organisms → Bacteria	2623	Open in IMG/M
3300009840\|Ga0126313_10065840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2594	Open in IMG/M
3300009840\|Ga0126313_10075831	Not Available	2428	Open in IMG/M
3300009840\|Ga0126313_10076205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2422	Open in IMG/M
3300009840\|Ga0126313_10169777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1659	Open in IMG/M
3300009840\|Ga0126313_10463273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1012	Open in IMG/M
3300009840\|Ga0126313_10476609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	997	Open in IMG/M
3300009840\|Ga0126313_10568224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	912	Open in IMG/M
3300009840\|Ga0126313_11823818	Not Available	509	Open in IMG/M
3300010036\|Ga0126305_10231032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1183	Open in IMG/M
3300010036\|Ga0126305_10265301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1107	Open in IMG/M
3300010036\|Ga0126305_10357350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	957	Open in IMG/M
3300010036\|Ga0126305_10714172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	678	Open in IMG/M
3300010036\|Ga0126305_11217972	Not Available	520	Open in IMG/M
3300010037\|Ga0126304_10117255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1698	Open in IMG/M
3300010037\|Ga0126304_10417056	Not Available	897	Open in IMG/M
3300010037\|Ga0126304_10552055	Not Available	775	Open in IMG/M
3300010037\|Ga0126304_10566855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	764	Open in IMG/M
3300010037\|Ga0126304_10594814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	745	Open in IMG/M
3300010037\|Ga0126304_10670326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	700	Open in IMG/M
3300010037\|Ga0126304_11066281	Not Available	552	Open in IMG/M
3300010037\|Ga0126304_11179039	Not Available	525	Open in IMG/M
3300010038\|Ga0126315_10012329	Not Available	4089	Open in IMG/M
3300010038\|Ga0126315_10440245	Not Available	824	Open in IMG/M
3300010038\|Ga0126315_10498711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	776	Open in IMG/M
3300010038\|Ga0126315_10875241	Not Available	596	Open in IMG/M
3300010039\|Ga0126309_10031704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2408	Open in IMG/M
3300010039\|Ga0126309_10055257	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300010039\|Ga0126309_10617442	Not Available	685	Open in IMG/M
3300010039\|Ga0126309_10618774	Not Available	684	Open in IMG/M
3300010039\|Ga0126309_10848024	Not Available	601	Open in IMG/M
3300010039\|Ga0126309_11064236	Not Available	547	Open in IMG/M
3300010040\|Ga0126308_10023532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3353	Open in IMG/M
3300010040\|Ga0126308_10141121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1514	Open in IMG/M
3300010040\|Ga0126308_10389508	Not Available	928	Open in IMG/M
3300010040\|Ga0126308_10458666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	857	Open in IMG/M
3300010041\|Ga0126312_10074223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	2295	Open in IMG/M
3300010041\|Ga0126312_10104616	Not Available	1937	Open in IMG/M
3300010041\|Ga0126312_10373292	All Organisms → Viruses → Predicted Viral	1012	Open in IMG/M
3300010041\|Ga0126312_10407982	Not Available	966	Open in IMG/M
3300010041\|Ga0126312_10980749	Not Available	618	Open in IMG/M
3300010041\|Ga0126312_11078627	Not Available	589	Open in IMG/M
3300010041\|Ga0126312_11197944	Not Available	560	Open in IMG/M
3300010042\|Ga0126314_10114673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1846	Open in IMG/M
3300010042\|Ga0126314_11162047	Not Available	576	Open in IMG/M
3300010044\|Ga0126310_10028211	All Organisms → cellular organisms → Bacteria	2914	Open in IMG/M
3300010044\|Ga0126310_10076995	All Organisms → Viruses → Predicted Viral	1951	Open in IMG/M
3300010044\|Ga0126310_10158381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1449	Open in IMG/M
3300010044\|Ga0126310_10690107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	773	Open in IMG/M
3300010044\|Ga0126310_10707731	Not Available	764	Open in IMG/M
3300010044\|Ga0126310_10733434	Not Available	753	Open in IMG/M
3300010045\|Ga0126311_10366351	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1101	Open in IMG/M
3300010045\|Ga0126311_10812506	Not Available	754	Open in IMG/M
3300010045\|Ga0126311_10844133	Not Available	741	Open in IMG/M
3300010166\|Ga0126306_10127724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1868	Open in IMG/M
3300010166\|Ga0126306_10622121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	862	Open in IMG/M
3300010166\|Ga0126306_10939580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	702	Open in IMG/M
3300010166\|Ga0126306_10977165	Not Available	689	Open in IMG/M
3300012022\|Ga0120191_10033834	Not Available	812	Open in IMG/M
3300013012\|Ga0169965_1103670	Not Available	546	Open in IMG/M
3300013026\|Ga0170681_1019141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1485	Open in IMG/M
3300013026\|Ga0170681_1040646	Not Available	957	Open in IMG/M
3300014487\|Ga0182000_10456879	Not Available	582	Open in IMG/M
3300014488\|Ga0182001_10282122	Not Available	661	Open in IMG/M
3300014488\|Ga0182001_10676161	Not Available	510	Open in IMG/M
3300014497\|Ga0182008_10080418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1603	Open in IMG/M
3300018432\|Ga0190275_11602604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	729	Open in IMG/M
3300018432\|Ga0190275_13250607	Not Available	526	Open in IMG/M
3300018466\|Ga0190268_10154459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1178	Open in IMG/M
3300018466\|Ga0190268_10868035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	696	Open in IMG/M
3300018891\|Ga0193610_1115737	Not Available	675	Open in IMG/M
3300018918\|Ga0193616_1181874	Not Available	563	Open in IMG/M
3300018933\|Ga0193614_1073874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	956	Open in IMG/M
3300018933\|Ga0193614_1090465	Not Available	855	Open in IMG/M
3300018939\|Ga0193593_1011821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2125	Open in IMG/M
3300018946\|Ga0193599_1018889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae → Novibacillus → Novibacillus thermophilus	2585	Open in IMG/M
3300019132\|Ga0193604_1020129	All Organisms → Viruses → Predicted Viral	1061	Open in IMG/M
3300019132\|Ga0193604_1050609	Not Available	576	Open in IMG/M
3300019377\|Ga0190264_10511538	Not Available	825	Open in IMG/M
3300019377\|Ga0190264_11569747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	577	Open in IMG/M
3300020202\|Ga0196964_10578990	Not Available	552	Open in IMG/M
3300021184\|Ga0196959_10037637	Not Available	964	Open in IMG/M
3300021184\|Ga0196959_10071336	Not Available	756	Open in IMG/M
3300021184\|Ga0196959_10084778	Not Available	708	Open in IMG/M
3300024430\|Ga0196962_10049252	Not Available	1273	Open in IMG/M
3300025167\|Ga0209642_10751730	Not Available	516	Open in IMG/M
3300028744\|Ga0307318_10321252	Not Available	544	Open in IMG/M
3300031731\|Ga0307405_11729410	Not Available	555	Open in IMG/M
3300031852\|Ga0307410_11806231	Not Available	543	Open in IMG/M
3300031901\|Ga0307406_10396294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1093	Open in IMG/M
3300031995\|Ga0307409_101415560	Not Available	722	Open in IMG/M
3300031995\|Ga0307409_102930768	Not Available	504	Open in IMG/M
3300032126\|Ga0307415_101089303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300032159\|Ga0268251_10079665	Not Available	1132	Open in IMG/M
3300034026\|Ga0334946_045808	Not Available	732	Open in IMG/M
3300034131\|Ga0334911_053085	Not Available	587	Open in IMG/M
3300034132\|Ga0334915_120830	Not Available	551	Open in IMG/M
3300034143\|Ga0334961_096178	Not Available	523	Open in IMG/M
3300034174\|Ga0334932_070792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	603	Open in IMG/M
3300034377\|Ga0334931_161269	Not Available	542	Open in IMG/M
3300034391\|Ga0334917_015308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1204	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.06%
Host-Associated	Host-Associated	7.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.06%
Plants	Host-Associated → Plants	7.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.56%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	2.38%
Phylloplane	Host-Associated → Plants → Phylloplane	2.38%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.02%
Sand	Environmental → Terrestrial → Soil → Sand	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.56%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	2.38%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.38%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	1.59%
Loam	Environmental → Terrestrial → Soil → Loam	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	65.08%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.56%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	3.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.38%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	2.38%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.59%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	1.59%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	56.35%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.76%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.38%
Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock	2.38%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.59%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	1.59%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2119805009	Soil microbial communities from sample at FACE Site NTS_007 Nevada Test Site	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300013012	Gypsum rock endolithic microbial communities from the Atacama Desert, Chile - Cordon de Lila	Environmental	Open in IMG/M
3300013026	Gypsum rock hypoendolithic microbial communities from the Atacama Desert, Chile - Cordon de Lila	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018891	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018918	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018946	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300019132	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034131	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMS	Environmental	Open in IMG/M
3300034132	Biocrust microbial communities from Mojave Desert, California, United States - 11HMC	Environmental	Open in IMG/M
3300034143	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 57SNS	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034391	Biocrust microbial communities from Mojave Desert, California, United States - 13HMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FNTS007_06466160	2119805009	Soil	MDHHENMQQLLTRLNNVRDSMEEALGYIRGIEDDYRRGLLEAHIRGAIREANAQI
JGI1027J11758_130790622	3300000789	Soil	MDQHENLQELLTRLNNIRDSMEEALGDIRGIEDDYRRGLLEAHIRGAIREINAQITELVSQRQES*
JGI11615J12901_109908162	3300000953	Soil	MDQHENLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAIREINAQITELVSQRQES*
Ga0058697_103238561	3300005562	Agave	MRRYVMDQHEDLQELLTRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIKGAIREITEQITELVSSH*
Ga0058697_108033131	3300005562	Agave	MDQHANLQELLTRLNNIRDSMEEALGDVKGIEDDYRRGLLEAHIRGAIREINAQIAELVSSRQKMAED*
Ga0079216_113285962	3300006918	Agricultural Soil	MDRHENLQELLTRLNNIRDSMEEALDDIGGIEDDYRRGLLEAHIRGAIREINAQITELVSSQQERAEG*
Ga0079216_115392291	3300006918	Agricultural Soil	MDQHENLQELLTRLNNIRDSMEVALDDIRGIEDDYRRGLLEAHIRGAIREINAQIAELVSSH*
Ga0079218_120403882	3300007004	Agricultural Soil	MDRHENLQELLTRLNNIRDSMEEALADIKGIEDDYRRGLLEAHIRGAIREINAQITELVSSRQEMAED*
Ga0105679_101569804	3300007790	Soil	MDRHENMQELLTRLNNVRDSMEEAWDHIRGIEDDYRRGLLEAHIRGAIRETNAQITELVSSH*
Ga0105679_102633443	3300007790	Soil	MDQHEDLQELLTRLNSVRDSMEAALGYVRGIEDDYRRGLLEAHIKGAMREINEQITELVSQRRR*
Ga0105679_105359843	3300007790	Soil	LQELLARLNNVRDSMEDALASVSGIEDDYRRGLLEAHIKGAICEISEQITELVSQRRRRG
Ga0105679_109239532	3300007790	Soil	MDQHENLQELLTRLNNIRDSMEAALGDIRGIEDDYRRGLLEAHIRGAIREINAQISELVSSQKRR*
Ga0126307_100306513	3300009789	Serpentine Soil	MGEVMDQYENLQELLTRLNNIRDSMEGALGYVKGIEDDYRRGLLEAHIRGAIREINAQITELVSSRQKMAED*
Ga0126307_100363507	3300009789	Serpentine Soil	MMNQHENLQELLMRLNNVRDSMEEALGYVSGIEDDYRRGMLEAHIKGAIREITEQINELVSSR*
Ga0126307_100643452	3300009789	Serpentine Soil	MGDVMDQHDNLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAIREINAQITELVSSH*
Ga0126307_100971951	3300009789	Serpentine Soil	MVDRHENLQELLGRLNNVRDAMEEALGHVRGIEDDYRRGLLEAHIRGALREINEQVSELVSSR*
Ga0126307_100983783	3300009789	Serpentine Soil	MDRHEDLQELLGRLNNVRDSMEEALGHVSGIEDDYRRGLLEAHIKGALREINEQVSELVSSR*
Ga0126307_101085455	3300009789	Serpentine Soil	MDQYEDSRGLFGRLDNVRDAMEEALGHARGIEDDYRRGLLEAHIRGALREVNEQIAELASPRSRG*
Ga0126307_101740753	3300009789	Serpentine Soil	LWDKVPAHHDYVGRHLAHHEKVVVMDQHENLQELLTRLNTIRDSMEEALDDIKGIEDDYRRGLLEAHIRGAIREINAQIAELVSSH*
Ga0126307_102714592	3300009789	Serpentine Soil	MDRHQDLQDLLGRLDNIRDSMEEALGHVRGIEDDYRRGLLEAHIRGALREINEQLSELTSSR*
Ga0126307_103781261	3300009789	Serpentine Soil	MDRHENLQELLGRLNNVRDSMEEALGHVRGIEDDYRRGLLEAHIRGALREINEQITELVSSH*
Ga0126307_104886012	3300009789	Serpentine Soil	MVDRHENLQELLGRLNNLRDAMEEALGHVRAIEDDYRRGLLEAHIRGALRELNEQITELVSSR*
Ga0126307_106023312	3300009789	Serpentine Soil	MEQHEDLRELLGRLNNVRGSMEEALGHVRGIEDDYRRGLLEAHIRGALREINEQLAELTPSR*
Ga0126307_106157321	3300009789	Serpentine Soil	DNLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAKREINAQITELVSSHQKMVED*
Ga0126307_113086072	3300009789	Serpentine Soil	MRRDVMDQHEDLRELLTRLNNARDSMEAALGYVSGIEDDYRRGLLEAHIRGAIREVTEQITELVSSR*
Ga0126313_100642973	3300009840	Serpentine Soil	MDQHENLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAKREINAQITELVSSHQKMVED*
Ga0126313_100658404	3300009840	Serpentine Soil	MDQHEDLQELLTRLNNVRDSMEVALGYVRGIEDDYRRGLLEAHIRGAIREITEQITELVSSRKKR*
Ga0126313_100758316	3300009840	Serpentine Soil	MRRYVMDQHEELQELLRRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIKGAIRETTEQITELVSSR*
Ga0126313_100762054	3300009840	Serpentine Soil	MDEHEDLQELLTRLNSVRDSMEEALGYVRGIEDDYRRGLLEAHIRGAIREVTEQITELVSQRRR*
Ga0126313_101697772	3300009840	Serpentine Soil	MDQHGELQELLTRLNNVRNSMEEAKGYVRGIEDDYRRGLLEAHIRGAIRETTEQITELLSSHR*
Ga0126313_104632732	3300009840	Serpentine Soil	LAHPEKGIVMDQHDNLQELLTRLNNIRDSIEEVLDDIKGIEDDYRRGLLEAHIRGAIREINAQITELVSSHQES*
Ga0126313_104766091	3300009840	Serpentine Soil	ENLQELLGRLNNVRDSMEEALGHVRGIEDDYRRGLLEAHIRGALREINEQLSELTSSR*
Ga0126313_105682242	3300009840	Serpentine Soil	MDQHENLQELLTRLNNIRDSMEEALDDIKGIEDDYRRGLLEAHIRGAIREINAQITELVSQRQES*
Ga0126313_118238182	3300009840	Serpentine Soil	MGDVMNQHDNLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAIREINAQITELVSSH*
Ga0126305_102310322	3300010036	Serpentine Soil	MDRHENLQELLGRLNNVRDAMEEALGHVRGIEDDYRRGLLEAHIRGALREINEQVSELVSSR*
Ga0126305_102653012	3300010036	Serpentine Soil	MMNQHENLQELLMRLNNVRNSMEEALGYVSGIEDDYRRGMLEAHIKGAIREITEQINELVSSR*
Ga0126305_103573501	3300010036	Serpentine Soil	QHENLQELLTRLNTIRDSMEVALDDIRGIEDDYRRGLLEAHIRGAIREINAQIAELVSSH
Ga0126305_107141723	3300010036	Serpentine Soil	MGDVMNQHENLQELLTRLNNIRYSMEVALDDIRGIEDDYRRGLLEAHIRGAIREINAQISELVSSH*
Ga0126305_112179722	3300010036	Serpentine Soil	MDQHEDLQELLTRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIKGAIRETTEQITELVSSR*
Ga0126304_101172551	3300010037	Serpentine Soil	MGAVMNQHDNLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAIREINAQITELV
Ga0126304_104170562	3300010037	Serpentine Soil	LAHHEKVVVLDQHENLQELLTRLNNIRYSMEVTLDDIRGIEDDYRRGLLEAHIRGAIREINAQIAELVSSH*
Ga0126304_105520551	3300010037	Serpentine Soil	MVGRHLAHLEKVIVMDQHDNLQELLTRLNNIRHSMEVALDDIKGIEDDYRRGLLEAHIRGAIREINAQISELVSSHQES*
Ga0126304_105668552	3300010037	Serpentine Soil	MMNQHENMQELLMRLNNVRNSMEEALGYVSGIEDDYRRGMLEAHIKGAIREITEQINELVSSR*
Ga0126304_105948143	3300010037	Serpentine Soil	MDQYEDSRGLFGRLDNVRDAMEEALGHARGIEDDYRRGLLEAHVRGALREVNEQIAELASPRSRG*
Ga0126304_106703263	3300010037	Serpentine Soil	DNLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAIREINAQITELVSSH*
Ga0126304_110662811	3300010037	Serpentine Soil	MDQHEDLQGLLVRLTNVRDSMEAALGYVKGIEDDYRRGLLEAHIKGALREISEQITELVSSH*
Ga0126304_111790393	3300010037	Serpentine Soil	TRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAKREINAQITELVSSHQKMVED*
Ga0126315_100123298	3300010038	Serpentine Soil	VTEQHENLQELLTRLNNIRDSMEAALGYVRGIEDDYRRGLLEAHIRGAIREIDAQIQELVSSL*
Ga0126315_104402452	3300010038	Serpentine Soil	MRTYVMDEHEGLQDLLRRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIRGAIREVTEQITELVSQRRR*
Ga0126315_104987112	3300010038	Serpentine Soil	MDHHENLQELLTRLNNIRDSMEEALDDIKGIEDDYRRGLLEAHIRGAIREINAQITELVSLRQES*
Ga0126315_108752411	3300010038	Serpentine Soil	MDRHEDLQELLGQLNNVRDSMEEALGHVSGIEDDYRRGLLEAHIKGALREINEQVSELVSSR*
Ga0126309_100317044	3300010039	Serpentine Soil	MDEHENLQELLARLNNVRDSMEESLGYIRGIEDDYRRGLLEAHIRGAIREVTEQITELVSSR*
Ga0126309_100552572	3300010039	Serpentine Soil	MGDVMDQHESLQELLTRLNNIRDSMEKALGDVKGIEDDYRRGLLEAHIRGAIRELNAQITELVSSRRKRAED*
Ga0126309_106174422	3300010039	Serpentine Soil	MDQHENLQELLTRLNNIRDSMEEALGDIKGIEDDYRRGLLEAHIRGALREINEQITELTSSR*
Ga0126309_106187741	3300010039	Serpentine Soil	MDRHENMQELLTRLNNVRDSMEEALGYIRGIEDDYRRGLLEAHIRGAIREINAQISELVSSRK*
Ga0126309_108480242	3300010039	Serpentine Soil	MRRYVMDQHEELQELLTRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIRGAIRETTEQITELVSQRKRG*
Ga0126309_110642361	3300010039	Serpentine Soil	EDLQELLTRLNNIRDSMEAALGHIRGIEDDYRRGLLEAHIRGAIREINAQISELVSSHKR
Ga0126308_100235321	3300010040	Serpentine Soil	MVDRHENLQELLGRLNNVRDAMEEALGHVRGIEDDYRRGLLEAHIRGALRELNEQITELVSSR*
Ga0126308_101411212	3300010040	Serpentine Soil	MGAVMNQHDNLQELLTRLNNIRDSMEEALDDIKGIEDDYRRGLLEAHIRGAIREINAQITELVSSH*
Ga0126308_103895083	3300010040	Serpentine Soil	MGDVMHQHENLQELLTRLNNIRDSMEEALGDIKGIEDDYRRGLLEAHIRGAIREINAQMTELVSQRQES*
Ga0126308_104586662	3300010040	Serpentine Soil	MDWHGDSRQLFGRLDNVRDAMEEALGHARGIEDDYRRGLLEANIRGALREINEQMAELVSLR*
Ga0126312_100742234	3300010041	Serpentine Soil	MRRDVMDQHEELQELLTRLNNVRDSMEAALGYVSGIEDDYRRGLLEAHIKGAMRETTEQITELVSSHR*
Ga0126312_101046163	3300010041	Serpentine Soil	MNQHEDLQELLTRLNNIRDSMEAALGHIRGIEDDYRRGLLEAHIRGAIREINAQISELVSSHQSW*
Ga0126312_103732923	3300010041	Serpentine Soil	MGDVMDQHENLQELLTRLNNIRDSMEEALDDIKGIEDDYRRGLLEAHIRGAIREINAQITELVSSHQES*
Ga0126312_104079822	3300010041	Serpentine Soil	MRRDVMDQHEDLRELITRLNNVRDSMEAALGYVSGIEDDYRRGLLEAHIRGAIREVTEQITELVSSR*
Ga0126312_109807492	3300010041	Serpentine Soil	MRRYVMDQQEELQELLTRLNNIRDSMEEALGYVRGIEDDYRRGLLEAHIKGAIRETTEQITELVSSHR*
Ga0126312_110786272	3300010041	Serpentine Soil	MRRYLMDQHEELQELLTRLNNVRNSMEEAKGYVRGIEDDYRRGLLEAHIRGAIRETTEQITELLSSHR*
Ga0126312_111979442	3300010041	Serpentine Soil	MRRYVMDQHEDLQELLARLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIRGAIRETTEQKTELVSQRKRG*
Ga0126314_101146732	3300010042	Serpentine Soil	MDQHDNLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAIREINAQITELVSSH*
Ga0126314_111620472	3300010042	Serpentine Soil	MDEHEKLQELLRRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIRGAIREVTEQITELVSQRRR*
Ga0126310_100282114	3300010044	Serpentine Soil	MVDRHENLQELLGRLNNVRDSMEEALGHVSGIEDDYRRGLLEAHIKGALREINEQVSELVSSR*
Ga0126310_100769954	3300010044	Serpentine Soil	RWMVDRHENLQELLGRLNNVRDSMEEALGHVSGIEDDYRRGLLEAHIKGALREINEQVSELVSSR*
Ga0126310_101583812	3300010044	Serpentine Soil	MGDVMNQHENLQELLTRLNNIRDSMEVALDDIRGIEDDYRRGLLEAHIRGAIREINAQISELVSSH*
Ga0126310_106901072	3300010044	Serpentine Soil	MDQQEDLRELLTRLNNVRDSMEAAMGYVRGIEDDYRRGLLEAHIRGAMREINEQVTELVSQRRR*
Ga0126310_107077313	3300010044	Serpentine Soil	MDEHEDMQELLTRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIRGAIREITEQITELVSQRKRG*
Ga0126310_107334341	3300010044	Serpentine Soil	MRGYVMDQHEDLQELLTRLNDVRDSLEEALGYVSGIEDDYRRGLLEAHIKGAIREITEQITELVSSR*
Ga0126311_103663512	3300010045	Serpentine Soil	MVDRHENLQELLGRLNNVRDAMEEALGHVRGIEDDYGRGLLEAHIRGALREINEQVSELVSSR*
Ga0126311_108125062	3300010045	Serpentine Soil	MGDVMDQHENLQELLTRLNNIRDSMEEALGDIKGIEDDYRRGLLEAHIRGAIREINAQITELVSQRQES*
Ga0126311_108441332	3300010045	Serpentine Soil	MNQHENLQELLTRLNNIRDSMEVALDDIRGIEDDYRRGLLEAHIRGAIREINAQISELVSSH*
Ga0126306_101277242	3300010166	Serpentine Soil	MGAVMNQHDNLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAIREINAQITELVSSH*
Ga0126306_106221212	3300010166	Serpentine Soil	LAHREKVIVMDQHDNLQELLARLNNIRDSIEEVLDDIKGIEDDYRRGLLEAHIRGAIR
Ga0126306_109395802	3300010166	Serpentine Soil	MNQHENLQELLMRLNNVRDSMEEALGYVSGIEDDYRRGMLEAHIKGAVREITEQINELVSSS*
Ga0126306_109771651	3300010166	Serpentine Soil	MDQHDNLQELLTRLNNIRDSMEEALGDIRGIEDDYRRGLLEAHIRGAIREISAQITELVSQRQES*
Ga0120191_100338341	3300012022	Terrestrial	MGDVMDQHDNLQELLTRLNNIRDSMEEALGDIKGIEDDYRRGLLEAHIRGAIREINAQITELVSQRQES*
Ga0169965_11036702	3300013012	Rock	GLRRCVMDQHENLQELLARLNNIRDSMEEALGDVRGIEDDYRRGLLEAHITGAIREIDAQISELVSQR*
Ga0170681_10191412	3300013026	Rock	MMDQHENLQELLTRLNNIRDSMEEALGQVTGIEDDYRRGLLEAHIRGALREINEQITELVSSR*
Ga0170681_10406461	3300013026	Rock	VVDQHENLQELLTRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIKGAIREINEQITELVSSR*
Ga0182000_104568791	3300014487	Soil	LAHPEKVIVIDQHDNLQELLTRLNNIRDSIEEALDDIKGIEDDYRRGLLEAHIRGAIREINAQITELVSSHQES*
Ga0182001_102821221	3300014488	Soil	MGQHEDLQELLARLNNVRDSMEEALGYIRGIEDDYRRGLLEAHIRGAMREINAQIAELVSSHRGQ*
Ga0182001_106761612	3300014488	Soil	MDQHEDLQGLLSRLNNVRDSMEEALGYIGGIEDDYRRGLLEAHIRGAIREINAQITELVSSR*
Ga0182008_100804184	3300014497	Rhizosphere	MDRREDSRELLGRLDNVRDAMEEALGHVGGIEDDYRRGLLEAHIRGALREINEQMVELASSHERS*
Ga0190275_116026042	3300018432	Soil	MNQHENLQELLMRLNNVRDSMEEALGYVSGIEDDYRRGMLEAHIKGAIREITEQINELVSSR
Ga0190275_132506072	3300018432	Soil	MDQHEDLQELLTRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIKGAIREITEQITELVSSH
Ga0190268_101544591	3300018466	Soil	MDQYEDWRGLFGRLDNVRDAMEEALGHARGIEEDYRRELLEAHIRGALREVN
Ga0190268_108680351	3300018466	Soil	VRGLGDVMDQHDNLQELLTRLNNIRDSMEEALGDISGIEDDYRRGLLEAHIRGAIREINAQIAELVSSH
Ga0193610_11157372	3300018891	Soil	MDQHENLQELLTRLNNIRDSMEVALDDIRGIEDDYRRGLLEAHITGAIREINAQIAELVSSH
Ga0193616_11818741	3300018918	Soil	GSYVVDQHEDLQELLTRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIKGAIREVNEQITELVSQRRR
Ga0193614_10738741	3300018933	Soil	VDQHEDLQELLTRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIKGAIREVNEQITELV
Ga0193614_10904652	3300018933	Soil	MKDKETGVMGPHEDLQELLTRLNNVRDSMEEALGDVRGIEDDYRRGLLEAHIKGAIREVNEQITELVSQRRR
Ga0193593_10118212	3300018939	Soil	MGPHEDLQELLTRLNNVRDSMEEALGDVRGIEDDYRRGLLEAHIKGAIREVNEQITELVSQRRR
Ga0193599_10188894	3300018946	Soil	MDPHEDLQELLTRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIKGAIREVNEQI
Ga0193604_10201292	3300019132	Soil	MKDKETGVMDQHEDLQELLTRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIKGTLSEIDEQITELVS
Ga0193604_10506091	3300019132	Soil	LWDKVPTCRARLRWQALAHHEKVVVMDQQHENLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHITGAIREINAQIAELVS
Ga0190264_105115382	3300019377	Soil	MDQHENLQELLTRLNTIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAIREINVQITELVSQH
Ga0190264_115697471	3300019377	Soil	ELLTRLNNVRDSMEVALGYVRGIEDDYQRGLLEAHITGAIREINEQIAELMSSR
Ga0196964_105789901	3300020202	Soil	ERVRRCVMDQHENMQELLTRLNNIRDSLEATLGDIKGIEDDYRRGLLEAHIRGAIREINAQISELVSSH
Ga0196959_100376371	3300021184	Soil	MDHHEDLQELLTRLNNIRDSMEEALGDVRGIEDDYRRGLLEAHIRGAIREINAQITELVSSRK
Ga0196959_100713361	3300021184	Soil	MDRHENLQELLTRLNNIRDSMEEALADIRGIEDDYRRGLLEAHIRGAIREINAQITELVSSRQEMAED
Ga0196959_100847781	3300021184	Soil	MDPHENLQELLTRLNNVRDSMEVALGYVRGIEDDYRRGLLEAHIKGAIREINEQITELVSQRRR
Ga0196962_100492521	3300024430	Soil	MDRHENLQELLTRLNNIRDSMEEALADIRGIEDDYRRGLLEAHIRGAIREINAQITELVSSR
Ga0209642_107517301	3300025167	Soil	MDQHEDLQELLTRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIKGAIREITEQIAELVSSH
Ga0307318_103212521	3300028744	Soil	LLTRLNNIRDSMEGALDDIKGIEDDYRRGLLEAHIRGAIREINAQITELVSQRQES
Ga0307405_117294101	3300031731	Rhizosphere	TTVGRQLAHPEKGIVMDQHDNLQELLTRLNNIRDSIEEVLDDIKGIEDDYRRGLLEAHIRGAIREINAQITELVSSHQES
Ga0307410_118062313	3300031852	Rhizosphere	QHDNLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAIREINAQITELVSSH
Ga0307406_103962942	3300031901	Rhizosphere	MDQHENLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAKREINAQITELVSSHQKMVED
Ga0307409_1014155601	3300031995	Rhizosphere	MDQHENLQELLTRLNNIRDSMEAALGDIRGIEDDYRRGLLEAHIRGAIREINAQISELVSSQKRR
Ga0307409_1029307681	3300031995	Rhizosphere	MDQHENLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAIREINAQITELVSSH
Ga0307415_1010893032	3300032126	Rhizosphere	MDQHENLQELLTRLNNIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAKREINAQIT
Ga0268251_100796651	3300032159	Agave	LARCNNIRGSMEAALGGIKGIEDDYRRGLLEAHIRGAIREINAQISELVSSHKDSRGSWTSG
Ga0334946_045808_127_315	3300034026	Sub-Biocrust Soil	MDQHENLQELLTRLNTIRDSMEEALDDIRGIEDDYRRGLLEAHIRGAIREINAQIAELVSSH
Ga0334911_053085_229_447	3300034131	Sub-Biocrust Soil	MAGVQGMGDMMDQHENLQELLTRLNNIRDSMEAALGNVSGIEDDYRRGLLEAHIRGALREINEQITELVSSR
Ga0334915_120830_99_287	3300034132	Hypolithic Biocrust	MDQHEDLQELLTRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIKGAIREINEQITELVSSH
Ga0334961_096178_122_328	3300034143	Sub-Biocrust Soil	MDQHENLQELLTRLNNIRDSMEAALGNVSGIEDDYRRGLLEAHIRGALREINEQITELVSSRREMVED
Ga0334932_070792_353_541	3300034174	Sub-Biocrust Soil	MEQHDDLRELLGRLDNVRGSMEEALGHVRGIQDDYRRGLLEAHIRGALREINEQLAELTPSR
Ga0334931_161269_79_312	3300034377	Sub-Biocrust Soil	LAHPEKVIVMYQHENLQELLTRLNNIRDSMEAALGNVSGIEDDYRRGLLEAHIRGALREINEQITELVSSRREMVED
Ga0334917_015308_277_480	3300034391	Hypolithic Biocrust	VRRYVVDQHEDLQGLLTRLNNVRDSMEEALGYVRGIEDDYRRGLLEAHIKGATREINEQITELVSSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066499

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences