Metagenome / Metatranscriptome Family F066555

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066555
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	71 residues
Representative Sequence	MKGKLRKEFIERVKTDFDSDFVVEEVEDLIHDLCDEIENRLLNVYYELKRIKGLAEIDAIKNAVEELVDDLW
Number of Associated Samples	48
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.27 %
% of genes near scaffold ends (potentially truncated)	18.25 %
% of genes from short scaffolds (< 2000 bps)	92.06 %
Associated GOLD sequencing projects	34
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (58.730 % of family members)
Environment Ontology (ENVO)	Unclassified (99.206 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (63.492 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF02511	Thy1	48.41
PF06866	DUF1256	18.25
PF01555	N6_N4_Mtase	7.14
PF00436	SSB	1.59
PF14359	DUF4406	1.59
PF02086	MethyltransfD12	1.59
PF05014	Nuc_deoxyrib_tr	0.79
PF03796	DnaB_C	0.79
PF08708	PriCT_1	0.79
PF09588	YqaJ	0.79
PF00692	dUTPase	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	48.41
COG0863	DNA modification methylase	Replication, recombination and repair [L]	7.14
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	7.14
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	7.14
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	1.59
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	1.59
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	1.59
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	1.59
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.79
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.79
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.79
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.79
COG3613	Nucleoside 2-deoxyribosyltransferase	Nucleotide transport and metabolism [F]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.03 %
Unclassified	root	N/A	3.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.57 %
Viruses	superkingdom	All Organisms → Viruses	17.46 %
Unclassified	root	N/A	3.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.46 %
Unclassified	root	N/A	3.97 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	67.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.46 %
Unclassified	root	N/A	3.97 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	67.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.46 %
Unclassified	root	N/A	3.97 %

Name	Rank	Taxonomy	Distribution
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	30.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.46 %
Unclassified	root	N/A	3.97 %

Name	Rank	Taxonomy	Distribution
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	30.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.46 %
Unclassified	root	N/A	3.97 %

Name	Rank	Taxonomy	Distribution
unclassified Eubacteriales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales	28.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.46 %
Unclassified	root	N/A	3.97 %

Name	Rank	Taxonomy	Distribution
Clostridiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	28.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	17.46 %
Unclassified	root	N/A	3.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111016\|draft_c1109638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	549	Open in IMG/M
2209111016\|draft_c726302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	508	Open in IMG/M
2209111016\|draft_c811274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	505	Open in IMG/M
2209111018\|Meso_c1021070	Not Available	530	Open in IMG/M
3300000510\|Foulum_1017093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1616	Open in IMG/M
3300000510\|Foulum_1026193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1073	Open in IMG/M
3300000510\|Foulum_1034867	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300001975\|Draft_11021070	Not Available	534	Open in IMG/M
3300002079\|CSTR_1019028	All Organisms → Viruses → Predicted Viral	1156	Open in IMG/M
3300002163\|JGI24707J26582_10030716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2286	Open in IMG/M
3300002163\|JGI24707J26582_10031246	All Organisms → Viruses → Predicted Viral	2255	Open in IMG/M
3300002163\|JGI24707J26582_10037121	All Organisms → Viruses → Predicted Viral	1971	Open in IMG/M
3300002163\|JGI24707J26582_10136638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	689	Open in IMG/M
3300002163\|JGI24707J26582_10192024	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300002163\|JGI24707J26582_10204479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	512	Open in IMG/M
3300002164\|JGI24708J26588_10075696	All Organisms → Viruses → Predicted Viral	1095	Open in IMG/M
3300002164\|JGI24708J26588_10087189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	975	Open in IMG/M
3300002164\|JGI24708J26588_10152974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	627	Open in IMG/M
3300002166\|JGI24713J26584_10039373	All Organisms → Viruses → Predicted Viral	1260	Open in IMG/M
3300002166\|JGI24713J26584_10046423	All Organisms → Viruses → Predicted Viral	1083	Open in IMG/M
3300002166\|JGI24713J26584_10049985	All Organisms → Viruses → Predicted Viral	1016	Open in IMG/M
3300002166\|JGI24713J26584_10051292	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300002166\|JGI24713J26584_10060365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	863	Open in IMG/M
3300002167\|JGI24714J26587_10049712	All Organisms → Viruses → Predicted Viral	1098	Open in IMG/M
3300002168\|JGI24712J26585_10074007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1272	Open in IMG/M
3300002168\|JGI24712J26585_10093464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1038	Open in IMG/M
3300002168\|JGI24712J26585_10148932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	702	Open in IMG/M
3300002168\|JGI24712J26585_10158105	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300002168\|JGI24712J26585_10181859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	599	Open in IMG/M
3300002170\|JGI24711J26586_10061880	All Organisms → Viruses → Predicted Viral	1161	Open in IMG/M
3300002170\|JGI24711J26586_10157550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	562	Open in IMG/M
3300002174\|JGI24710J26742_10102093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	995	Open in IMG/M
3300002293\|JGI24504J29685_1009923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	617	Open in IMG/M
3300002377\|JGI24500J29687_10074277	All Organisms → Viruses → Predicted Viral	1982	Open in IMG/M
3300002378\|JGI24502J29692_10037006	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300002391\|JGI24501J29690_1114749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	540	Open in IMG/M
3300002392\|JGI24503J29689_10030829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3020	Open in IMG/M
3300002898\|draft_10305085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	807	Open in IMG/M
3300002898\|draft_10433346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	603	Open in IMG/M
3300002898\|draft_10439100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	597	Open in IMG/M
3300005835\|Ga0078910_112926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1260	Open in IMG/M
3300006840\|Ga0101790_103611	All Organisms → Viruses → Predicted Viral	1125	Open in IMG/M
3300006840\|Ga0101790_104335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1108	Open in IMG/M
3300009095\|Ga0079224_103258563	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300009653\|Ga0116169_1081612	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300009653\|Ga0116169_1163519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	759	Open in IMG/M
3300009653\|Ga0116169_1290426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	534	Open in IMG/M
3300009654\|Ga0116167_1181599	Not Available	710	Open in IMG/M
3300009654\|Ga0116167_1274483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	541	Open in IMG/M
3300009654\|Ga0116167_1289883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	522	Open in IMG/M
3300009655\|Ga0116190_1048308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1833	Open in IMG/M
3300009655\|Ga0116190_1109636	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300009655\|Ga0116190_1113876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1006	Open in IMG/M
3300009655\|Ga0116190_1175105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	746	Open in IMG/M
3300009655\|Ga0116190_1197862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	687	Open in IMG/M
3300009655\|Ga0116190_1211081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	657	Open in IMG/M
3300009657\|Ga0116179_1104612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1045	Open in IMG/M
3300009657\|Ga0116179_1128670	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300009657\|Ga0116179_1146550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	831	Open in IMG/M
3300009657\|Ga0116179_1281045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	543	Open in IMG/M
3300009658\|Ga0116188_1095511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1194	Open in IMG/M
3300009658\|Ga0116188_1106660	All Organisms → Viruses → Predicted Viral	1103	Open in IMG/M
3300009658\|Ga0116188_1234276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	646	Open in IMG/M
3300009663\|Ga0116181_1331875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	545	Open in IMG/M
3300009663\|Ga0116181_1359271	Not Available	520	Open in IMG/M
3300009668\|Ga0116180_1197917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	785	Open in IMG/M
3300009668\|Ga0116180_1201222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	776	Open in IMG/M
3300009668\|Ga0116180_1245242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	682	Open in IMG/M
3300009668\|Ga0116180_1290457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	613	Open in IMG/M
3300009668\|Ga0116180_1397899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	506	Open in IMG/M
3300009711\|Ga0116166_1133415	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300009711\|Ga0116166_1159266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	849	Open in IMG/M
3300009711\|Ga0116166_1202899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	724	Open in IMG/M
3300009711\|Ga0116166_1242258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	645	Open in IMG/M
3300009711\|Ga0116166_1345643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	515	Open in IMG/M
3300009712\|Ga0116165_1108069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1023	Open in IMG/M
3300009712\|Ga0116165_1167897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	760	Open in IMG/M
3300009714\|Ga0116189_1039775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2268	Open in IMG/M
3300009714\|Ga0116189_1044224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2100	Open in IMG/M
3300009714\|Ga0116189_1103436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1133	Open in IMG/M
3300009761\|Ga0116168_1117875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	702	Open in IMG/M
3300009761\|Ga0116168_1161277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	575	Open in IMG/M
3300009761\|Ga0116168_1198829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	505	Open in IMG/M
3300010311\|Ga0116254_1010134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5560	Open in IMG/M
3300010311\|Ga0116254_1038680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1748	Open in IMG/M
3300010311\|Ga0116254_1070775	All Organisms → Viruses → Predicted Viral	1029	Open in IMG/M
3300010338\|Ga0116245_10087326	All Organisms → Viruses → Predicted Viral	1893	Open in IMG/M
3300010338\|Ga0116245_10535279	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300010340\|Ga0116250_10367230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	839	Open in IMG/M
3300010340\|Ga0116250_10384434	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300010340\|Ga0116250_10473531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	713	Open in IMG/M
3300010340\|Ga0116250_10809626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	504	Open in IMG/M
3300010347\|Ga0116238_10397614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	894	Open in IMG/M
3300019243\|Ga0179953_1096660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	981	Open in IMG/M
3300025471\|Ga0209508_1041969	All Organisms → Viruses → Predicted Viral	1062	Open in IMG/M
3300025471\|Ga0209508_1074408	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300025589\|Ga0209409_1066325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	993	Open in IMG/M
3300025589\|Ga0209409_1088005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	803	Open in IMG/M
3300025589\|Ga0209409_1134627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	578	Open in IMG/M
3300025605\|Ga0209720_1018434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3016	Open in IMG/M
3300025605\|Ga0209720_1105736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	742	Open in IMG/M
3300025609\|Ga0209608_1014785	All Organisms → Viruses → Predicted Viral	2942	Open in IMG/M
3300025609\|Ga0209608_1068202	Not Available	987	Open in IMG/M
3300025613\|Ga0208461_1025153	All Organisms → Viruses → Predicted Viral	2393	Open in IMG/M
3300025613\|Ga0208461_1054310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1282	Open in IMG/M
3300025613\|Ga0208461_1071404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1030	Open in IMG/M
3300025613\|Ga0208461_1097805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	803	Open in IMG/M
3300025613\|Ga0208461_1155119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	555	Open in IMG/M
3300025613\|Ga0208461_1156186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	552	Open in IMG/M
3300025618\|Ga0208693_1078722	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300025618\|Ga0208693_1090683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	893	Open in IMG/M
3300025629\|Ga0208824_1055542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1399	Open in IMG/M
3300025631\|Ga0209204_1107942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	768	Open in IMG/M
3300025638\|Ga0208198_1064612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1218	Open in IMG/M
3300025638\|Ga0208198_1064693	All Organisms → Viruses → Predicted Viral	1217	Open in IMG/M
3300025638\|Ga0208198_1114107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	776	Open in IMG/M
3300025683\|Ga0208564_1070268	All Organisms → Viruses → Predicted Viral	1235	Open in IMG/M
3300025683\|Ga0208564_1087853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1043	Open in IMG/M
3300027510\|Ga0209537_1006879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	8379	Open in IMG/M
3300027510\|Ga0209537_1047393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	1376	Open in IMG/M
3300027510\|Ga0209537_1051308	All Organisms → Viruses → Predicted Viral	1274	Open in IMG/M
3300027510\|Ga0209537_1051345	All Organisms → Viruses → Predicted Viral	1273	Open in IMG/M
3300027510\|Ga0209537_1055230	All Organisms → Viruses → Predicted Viral	1184	Open in IMG/M
3300027510\|Ga0209537_1095110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	710	Open in IMG/M
3300027510\|Ga0209537_1098983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	684	Open in IMG/M
3300027510\|Ga0209537_1106134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	642	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	99.21%
Environmental	Environmental	0.79%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	59.52%
Biotransformation	Engineered → Biotransformation	28.57%
Bioreactor	Engineered → Bioreactor	4.76%
Solid Waste	Engineered → Solid Waste	3.97%
Unclassified	Engineered → Unclassified	2.38%
Terrestrial	Environmental → Terrestrial	0.79%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	58.73%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	28.57%
Grass	Engineered → Solid Waste → Grass	3.17%
Unclassified	Engineered → Unclassified → Unclassified	2.38%
Anaerobic	Engineered → Bioreactor → Anaerobic	2.38%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	2.38%
Soil	Environmental → Terrestrial → Soil	0.79%
Landfill	Engineered → Solid Waste → Landfill	0.79%
Unclassified	Engineered → Wastewater → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	58.73%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	28.57%
Composting	Engineered → Solid Waste → Grass → Composting	3.17%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified	2.38%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	2.38%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	2.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.79%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	0.79%
Unclassified	Engineered → Wastewater → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	58.73%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	28.57%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	3.17%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified → Unclassified	2.38%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	2.38%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	2.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.79%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	0.79%
Unclassified	Engineered → Wastewater → Unclassified → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	58.73%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	28.57%
Solid Waste From Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Solid Waste From Bioreactor	3.17%
Biogas Fermenter	Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter	2.38%
Anaerobic Digester	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester	2.38%
Anaerobic Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Anaerobic Reactor	1.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.79%
Biogas Fermenter	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Biogas Fermenter	0.79%
Wastewater Treatment Plant	Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater Treatment Plant	0.79%
Biogas Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Biogas Reactor	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111016	Thermophilic bioreactor microbial communities at WVSU, USA	Engineered	Open in IMG/M
2209111018	Mesophilic bioreactor microbial communities at Bielefeld, Germany	Engineered	Open in IMG/M
3300000510	Anaerobic digester microbial communities from Northern Denmark, sample from Foulum manure	Engineered	Open in IMG/M
3300001975	Biogas fermenter microbial communities from the University of Hamburg, Germany	Engineered	Open in IMG/M
3300002079	CSTRmetagenomics	Engineered	Open in IMG/M
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered	Open in IMG/M
3300002164	Biogas fermentation microbial communities from Germany - Plant 1 DNA2	Engineered	Open in IMG/M
3300002166	Biogas fermentation microbial communities from Germany - Plant 4 DNA1	Engineered	Open in IMG/M
3300002167	Biogas fermentation microbial communities from Germany - Plant 4 DNA2	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002170	Biogas fermentation microbial communities from Germany - Plant 3 DNA1	Engineered	Open in IMG/M
3300002174	Biogas fermentation microbial communities from Germany - Plant 2 DNA2	Engineered	Open in IMG/M
3300002293	Biogas fermentation microbial communities from Germany - Plant 4 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002377	Biogas fermentation microbial communities from Germany - Plant 2 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002378	Biogas fermentation microbial communities from Germany - Plant 3 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002391	Biogas fermentation microbial communities from Germany - Plant 2 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002392	Biogas fermentation microbial communities from Germany - Plant 3 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002898	Metagenome Biopara biogasfermenter May 2013 pooled	Engineered	Open in IMG/M
3300005835	Biogas reactor microbial communities from SLU, Alnarp, Sweden - PacBio 1 to 3 kb reads	Engineered	Open in IMG/M
3300006840	Anaerobic bioreactor microbial communities from Canach, Luxembourg	Engineered	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009653	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC130_MetaG	Engineered	Open in IMG/M
3300009654	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR3_MetaG	Engineered	Open in IMG/M
3300009655	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG	Engineered	Open in IMG/M
3300009657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG	Engineered	Open in IMG/M
3300009658	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG	Engineered	Open in IMG/M
3300009663	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG	Engineered	Open in IMG/M
3300009668	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG	Engineered	Open in IMG/M
3300009711	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR2_MetaG	Engineered	Open in IMG/M
3300009712	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR1_MetaG	Engineered	Open in IMG/M
3300009714	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR3_MetaG	Engineered	Open in IMG/M
3300009761	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC129_MetaG	Engineered	Open in IMG/M
3300010311	AD_JPTRca	Engineered	Open in IMG/M
3300010338	AD_JPMRca	Engineered	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300010347	AD_JPHGca	Engineered	Open in IMG/M
3300019243	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan ? AD_JPNMR2_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300025471	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC129_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025589	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR1_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025605	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025609	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC130_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025613	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025618	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025629	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025631	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025638	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025683	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
draft_11096382	2209111016	Solid Waste From Bioreactor	MKGKLRREFVERVKTDFGGNFIAEEVEDLIHELCDEVENRLLNVYYELKRIKGLTEIDAIKNAVEELVDDLW
draft_7263021	2209111016	Solid Waste From Bioreactor	MTRFGIKGKLRKEFIEQMRAILDGDIVVEEVEDLIHDFCDEIENRLLDVYYELKRIEGSAEIDTIRHA
draft_8112741	2209111016	Solid Waste From Bioreactor	MKGKLRREFVERVKTDFGGNFIAEEVEDLIHELCDEVENRLLNVYYELKRIKGLTEIDAIKNA
Meso_10210702	2209111018	Solid Waste From Bioreactor	VCLGSLRERMEAVLYGDIVEEEVEDLIHDFCDEIENRLLDICAELKRIEGLAEIDIIRNAVEELVDDLW
Foulum_10170933	3300000510	Anaerobic Digester	VKGKLRKEFIERMEAILDEDFVVEEVEELIHDLCDEIENRLLDVCDELKRIDAIRNTLEELVKDLW*
Foulum_10261931	3300000510	Anaerobic Digester	MKGKLRKEFIERAKTDFDSDFIVEEVEDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIKNAVEELVTDLW*
Foulum_10348672	3300000510	Anaerobic Digester	MKGKLRKEFIERVGTDLSGDFIVEEVEDLIHDLCDEIRNRLLDVYDELKRIEGLTETDAIRNTVEELVKDLW*
Draft_110210702	3300001975	Biogas Fermenter	VCLGSLRERMEAVLYGDIVEEEVEDLIHDFCDEIENRLLDICAELKRIEGLAEIDIIRNAVEELVDDLW*
CSTR_10190282	3300002079	Wastewater Treatment Plant	MKGKLRKEFIERMEAVLYGDIVEEEVEDLIHDFCDEIENRLLDVCAELKRIKGLREIDAIRNAVEELVTDLW*
JGI24707J26582_100307163	3300002163	Biogas Fermentantion	MKGKLRKEFIERMEAILDEDFVVEEVEELIHDLCDEIENRLLDVCAELKRIKGLREIDAIRNTLEELVKDLW*
JGI24707J26582_100312464	3300002163	Biogas Fermentantion	MKGKLRREFIERVKTDXGSNFIAEEVEDLIHELCDEVENRLLNVYYELKRIKGLAEIDAIRNTMEELVDDLW*
JGI24707J26582_100371212	3300002163	Biogas Fermentantion	MKGKLRKEFIERVKTDFDGDFIVEEVEDLIHELCDEIENRLLDVYYELKRIKGLTEIDPIREAVEELVDDLW*
JGI24707J26582_101366381	3300002163	Biogas Fermentantion	MKGKLRREFIERVKTDIGSNFIAEEVEDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIKNAV
JGI24707J26582_101920242	3300002163	Biogas Fermentantion	MKGKLRKEFIERVETDLDRDHMVEEVKYLIHELCDEIENRLLDVYDELKRIEGLTEIDAIRNTVEELMKDLW*
JGI24707J26582_102044791	3300002163	Biogas Fermentantion	MKGKLRKEFIERMEAVLYGDIVVEEVEDLIHDFCDEIENRLLDICAELKRIKGLAEIDIIRHAVEGLADDLW*
JGI24708J26588_100756962	3300002164	Biogas Fermentantion	MKGKLRREFIERVKTDIGSNFIAEEVEDLIHELCDEVENRLLNVYYELKRIKGLAEIDAIRNTMEELVDDLW*
JGI24708J26588_100871891	3300002164	Biogas Fermentantion	MKGKLRREFIERVKTDIGSNFIAEEVEDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIKNAVEELVDDLW*
JGI24708J26588_101529742	3300002164	Biogas Fermentantion	MKGKLRKEFIERMEAILDEDFVVEEVEELIHDLCDEIENRLLDVCAELKRIKGLREIDAIRN
JGI24713J26584_100393731	3300002166	Biogas Fermentantion	MKGKLRKEFIERVGTDLSGDFIVEDLIHDLCDEIRNRLLDVYDELKRIEGLTETDAIRNTVEELVKDLW*
JGI24713J26584_100464232	3300002166	Biogas Fermentantion	MKGKLRKEFIERVDAILDGDRMFQVEEEMKYLIHELCDEIENRLLNVYYELKRIRGLTEIDAIRNTVEELVDDLW*
JGI24713J26584_100499853	3300002166	Biogas Fermentantion	VKGKLRREFIERVKTDFGSGFIVEEAEDLIHELCDEIENRLLNVYYELKRIRGLTEIDAIKNTVEELVDDLW*
JGI24713J26584_100512923	3300002166	Biogas Fermentantion	MKGKLRREFIERVKTDIGSNFIAEEVEDLIHELCDEVENRLLNVYYELKRIKGLTEIDTIRNAVEELVDDL
JGI24713J26584_100603651	3300002166	Biogas Fermentantion	MEEGKLRKEFIERVGTDLNGDFIVEEVEDLIHDLCDEIRNRLLDVYDELKLIEGLTEIDAIKSTVEELVKDLW*
JGI24714J26587_100497123	3300002167	Biogas Fermentantion	MKGKLRREFIERVKTDIGSNFIAEEVEDLIHELCDEVENRLLNVYYELKRIKGLTEIDTIRNAVEELVDDLW*
JGI24712J26585_100740073	3300002168	Biogas Fermentantion	MKGKLRKEFIERVKTDFDSDFVVEEVEDLIHDLCDEIENRLLDVCAELKRIKGLREIDAIRSIVEDLMDDLW*
JGI24712J26585_100934642	3300002168	Biogas Fermentantion	MKGKLRKEFIERMEAVLYGDIVEEEVEDLIHDLCDEIENRLLDVYYELKRIEGLTEIDIIRNAVEELMKDLW*
JGI24712J26585_101489322	3300002168	Biogas Fermentantion	MKGKLRKEFIXXRMEAVLYGDIVEEEVEDLIHDFCDEIENRLLDVYYELKRIEGLTEIDIIRNAVGELADDLW*
JGI24712J26585_101581052	3300002168	Biogas Fermentantion	MKGKLRKEFIERMEAVLYGDIVEEEVEDLIHDLCDEIENRLLDVYYELKRIEGLTEIDAIRNTVEELMKDLW*
JGI24712J26585_101818592	3300002168	Biogas Fermentantion	MKGKLRKEFIERMEAVLYGDIVEEEVEDLIHDFCDEIENRLLDVYYELKRIEGLTEIDIIRNAVGELADDLW*
JGI24711J26586_100618801	3300002170	Biogas Fermentantion	ERMEAVLDEDIVEEEVEDLIHDFCDEIENRLLDVYYELKRIEGLTEIDIIRNAVEELMKDLW*
JGI24711J26586_101575502	3300002170	Biogas Fermentantion	MKGKLRKEFIERMEAVLYGDIVEEEVEDLIHDFCDEIENRLLDVYYELKRIEGLTEIDIIRNAVEELMKDLW*
JGI24710J26742_101020932	3300002174	Biogas Fermentantion	MTRFKIEGKLRREFVERVETDLDRDHMVEEVKYLIHELCDEIENILLHVCDELKRIDAIRDTLEELVKDLAD*
JGI24504J29685_10099232	3300002293	Biogas Fermentantion	MKGKLRREFVERVKTDFGGDFIAGEVEDLIHELCDEVENRLLNVYYELKRIKGLTEIDTIRNAVEELVDDLW*
JGI24500J29687_100742775	3300002377	Biogas Fermentantion	MARFKIEGKLRKEFIERVKTDFDGDFIVEEVEDLIHELCDEIENRLLDVYYELKRIKGLTEIDPIRDAVEELVNDL*
JGI24502J29692_100370061	3300002378	Biogas Fermentantion	MKGKLRKGFIERMEAVLYEDIVIEEVEDLIHDFCDQIQNRLLTIYYELRRIEGLTEIDAIRNTLEKLVKDLW*
JGI24501J29690_11147492	3300002391	Biogas Fermentantion	VRGKLRKEFIERVGTDLDKDFNVEQIENLIHELCDEIESRLLDVYDELRRIRGLTEIDAIRYTVGELMKDLW*
JGI24503J29689_100308291	3300002392	Biogas Fermentantion	EFIERMEAILDGDIVEEEVEDLIHDFCDQIQNRLLTIYYELKRIEGLTEIDAIRNTLEKLVKDLW*
draft_103050852	3300002898	Biogas Fermenter	VKGKLRREFIERVKTDFGSGFIVEEAEDLIHELCDEIENRLLNVYYELKRIRGLTEIDAIKNTVEEL
draft_104333462	3300002898	Biogas Fermenter	MRGKLRKEFIERMEAVLYGDIVEEEVEDLIHDFCDQIENRLLNVYYELKRIKGLTEINAIKNTVEELVDDLW*
draft_104391001	3300002898	Biogas Fermenter	MKGELRKEFIERVKTDLDRDFIVEEVEDLIHDLCDEIGNRLLDVYDELKRIEGLTEIDAIRNTVEELMKDLW*
Ga0078910_1129262	3300005835	Biogas Reactor	MKGKLREEFIELVKTDLDRDFIVEEVEGLIHDLCDEIENRLLDVYDELKRIEGLTEIDAIRNTVEELMRDLW*
Ga0101790_1036111	3300006840	Anaerobic Reactor	KLRKEFIERVKTDIGSNFIAEEVEDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIKNAVEELVDDLW*
Ga0101790_1043353	3300006840	Anaerobic Reactor	MKGKLRREFIERVKTDFGSNFIAEEVEDLIHDLCDEIENRILDVYDELKRIEESAEIDPIRNAVEKLADDLW*
Ga0079224_1032585632	3300009095	Agricultural Soil	MTRFKIEGKLRKEFIERAKTDFDSDFIVEEVEDLIHDLCDEIRNRLLDVYDELKRIEGLTETDAIRNTVEELVTDLW*
Ga0116169_10816122	3300009653	Anaerobic Digestor Sludge	MKGKLRREFIERAKTDFDSDFIVEQVEDLIHELCDEVENRLLNVYYELKRIKGLAEIDIIRHAVEGLADDLW*
Ga0116169_11635192	3300009653	Anaerobic Digestor Sludge	MKGKLRREFIERVKTDIGSNFIAEEVEDLVHELCDEVENRLLNVYYELKRIKGLTEIDAIRNTLEELVRDLW*
Ga0116169_12904262	3300009653	Anaerobic Digestor Sludge	MKGKLRKEFIERMRAILDGDIVVEEVEDLIHDFCDQIENRLLDVYYELKRIKGLAEIDIIRHAMEGLADDLW*
Ga0116167_11815991	3300009654	Anaerobic Digestor Sludge	MKGKLRKEFIERVETDLDRDHMVEEVKYLIHELCDEIENILLHVCNELKRIDAIRDTLEELAKDLAD*
Ga0116167_12744831	3300009654	Anaerobic Digestor Sludge	MKGKLRREFVERAKTDFDSDFIVEEVEDLIHDLCDEIENRLLNVYYELKRIKGLAEIDAIKNA
Ga0116167_12898832	3300009654	Anaerobic Digestor Sludge	MKGKLRREFVERVKTDFDSDFIVEQVEDLIHELCDEVENRLLNVYYELKRIKGLAEIDIIRHAVEELVDDLW*
Ga0116190_10483082	3300009655	Anaerobic Digestor Sludge	MKGGLRNEFIERVKTDFDSDFAVEDLIHDLCDEIGRRLFDVCAELKRIKGLREIDAIRSIVENLVDDLW*
Ga0116190_11096362	3300009655	Anaerobic Digestor Sludge	MKGKLRKEFIERAKTDFDSNFIVEEVEDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIKNAVEELVDDLW*
Ga0116190_11138762	3300009655	Anaerobic Digestor Sludge	MKGKLRKEFIERMEAILDGDIVVEEVEDLIHDFCDQIENRLLDICAELKRIKGLAEIDIIRHAVEGLADDLW*
Ga0116190_11751051	3300009655	Anaerobic Digestor Sludge	MKGGLRNEFIERVKTDFGSDFAVEEVEDLIHDLCDEIENRLLDICAELKRIKGLAEIDIIRHAVEGLADDLW*
Ga0116190_11978621	3300009655	Anaerobic Digestor Sludge	MKGRLRREFIERVKTDFDSDFIVEEVEDLIHELCDEVENRLLNVYYELKRIRGLTEIDAIKNTVEELVDDLW*
Ga0116190_12110812	3300009655	Anaerobic Digestor Sludge	MKGGLRNEFIERVKTDFDNDFVVEEVEDLIHDLCDEIENRLLDICAELKRIKGLREIDAIRSIVEDLVDDLW*
Ga0116179_11046122	3300009657	Anaerobic Digestor Sludge	MKGKLRKEFVERVKMVLDRDFTVEEVEDLIHEFCDEIEIRLLDVRADLRRIEGLMEINAIRNTVEELLMELW*
Ga0116179_11286702	3300009657	Anaerobic Digestor Sludge	MKGKLRREFVERVKTDFDSDFIVEQVGDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIKNAVEELVDDLW*
Ga0116179_11465502	3300009657	Anaerobic Digestor Sludge	MKGKLRREFVERVKTDIGSNFIAEEVEDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIRSIVEDLVDDLW*
Ga0116179_12810452	3300009657	Anaerobic Digestor Sludge	MKGELRKEFIERVKTDFDSDFIVEEVEDLIHELCDEVENRLLDVYYELKRIKGLAEIDAIKNAVEELVDDLW*
Ga0116188_10955113	3300009658	Anaerobic Digestor Sludge	MKGGLRNEFIERVKTDFGSDFVVEEVEDLIHDLCDEIENRLLDICAELKRIKGLAEIDIIRRAVEGLADDLW*
Ga0116188_11066602	3300009658	Anaerobic Digestor Sludge	MKGKLRKEFIERVKTDFDSDFIVEEVEDLIHDLCDEIENRLLDICAELKRIEELADIDIIKNAVEKLADDLW*
Ga0116188_12342762	3300009658	Anaerobic Digestor Sludge	MKGGLRNEFIERVKTDFGSDFVVEEAEDLIHDLCDEIENRLLDVCAELKRIKGLREIDAIRSIVEDLVDDLW*
Ga0116181_13318752	3300009663	Anaerobic Digestor Sludge	MKGELRKEFIEQMRAILDGDIVVEEVEDLIHDFCDEIENRLLDICAELKRIKGLAEIDIIRHAVEGLADDLW*
Ga0116181_13592712	3300009663	Anaerobic Digestor Sludge	GSDERTRRAIMKGKLRREFVERAKTDFDSDFIVEEVEDLIHELCDEIENRLLNVYYELKRIKGLAEIDIIKNAVEELVDDLW*
Ga0116180_11979171	3300009668	Anaerobic Digestor Sludge	MKGKLRREFVERAKTDFDSDFIVEQVEDLIHELCDEVENRLLNVYYELKRIKGLAEIDAIRSIVEELVDDLW*
Ga0116180_12012222	3300009668	Anaerobic Digestor Sludge	MKGKLRKEFIEWAKTDLDEDFIVKEVEDLIHDLCDEIENRLLDVYDELKRIKGLTEIDAIRSIVEDLVDDLW*
Ga0116180_12452422	3300009668	Anaerobic Digestor Sludge	MKGELRIEFIERMEAILDEDFVAGEVENLIHDLCDEIETRLLDVYYELKQIKGLTEIDDIRNTLGELIEDLQ*
Ga0116180_12904571	3300009668	Anaerobic Digestor Sludge	MTRFKIEGKLRREFVERVKTDFDSDFVVEEVEDLIHDLCDEIENRLLNVYYELKRIRGLTEIDA
Ga0116180_13978992	3300009668	Anaerobic Digestor Sludge	MKGKLRREFVERVKTDFDSDFIVEQVGDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIKN
Ga0116166_11334152	3300009711	Anaerobic Digestor Sludge	MKGGLRNEFIERVKTDFDSDFVVEEIEDLIHDLCDEIENRLLDVYDELKRIKGLREIDAIRSIVEDLIDDLW*
Ga0116166_11592662	3300009711	Anaerobic Digestor Sludge	MKGKLRREFVERMEAILDGDIVVEEVEDLIHDFCDQIENRLLDICAELKRIKGLAEIDIIRHAMEGLADDLW*
Ga0116166_12028992	3300009711	Anaerobic Digestor Sludge	MKGKLRREFVERAKTDFDSDFIVEQVEDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIKNAVEELVDDLW*
Ga0116166_12422581	3300009711	Anaerobic Digestor Sludge	LRKEFIEQMRAILDGDIVVEEVEDLIHDFCDEIENRLLDICAELKRIKGLAEIDIIRHAVEGLADDLW*
Ga0116166_13456431	3300009711	Anaerobic Digestor Sludge	MKGKLRNEFIERVKTDFDSDFVVEEVEDLIHDLCDEIENRLLDVCAELKRIKGLREIDAIRSIVEDLVDDLW*
Ga0116165_11080692	3300009712	Anaerobic Digestor Sludge	MKGKLRKEFIERVKTDFDSDFVVEEVEDLIHDLCDEIENRLLNVYYELKRIKGLAEIDAIKNAVEELVDDLW*
Ga0116165_11678972	3300009712	Anaerobic Digestor Sludge	MKGKLRKEFIERVKTNFDNDFIVEEVEDLIHELCDEIENRLLDVYYELKRIEELADIDIIKNAVEKLADDLW*
Ga0116189_10397752	3300009714	Anaerobic Digestor Sludge	MKGKLRREFVERVKTDFDSDFIVEEVEDLIHDLCDEIENRLLDVCAELKRIKGSREIDAIRSIVENLVDDLW*
Ga0116189_10442243	3300009714	Anaerobic Digestor Sludge	MKGGLRNEFIERVKTDFGSDFVVEEVEDLIHDLCDEIGRRLFDVCAELKRIKGSREIDAIRSIVKDLMDDLW*
Ga0116189_11034363	3300009714	Anaerobic Digestor Sludge	LYHWYWKIRRAIMKGGLRNEFIERVKTDFGSDFVVEEAEDLIHDLCDEIENRLLDICAELKRIKGLREIDAIRSIVEDLVDDLW*
Ga0116168_11178751	3300009761	Anaerobic Digestor Sludge	MKGKLREEFIEQMKAILDGDIVVEEVEDLIHDFCDEIENRLLDICAELKRIKGLAEIDIIRHAVEGLADDLW*
Ga0116168_11612772	3300009761	Anaerobic Digestor Sludge	MKGEMRKEFIERMRAILDGDIIVEEVEDLIHDFCDQIENRLLDVYYELKRIKGLAEIDIIRHAVEGLADDLW*
Ga0116168_11988291	3300009761	Anaerobic Digestor Sludge	MKGKLRREFIERVKTDIGSNFIAEEVEDLVHELCDEVENRLLNVYYELKRIKGLTEIDIIKNAVEELVRDLW*
Ga0116254_10101345	3300010311	Anaerobic Digestor Sludge	MKGGLRKEFIERVKTDFDSDFVVEEIEDLIHDLCDEIENRLLDVCAELKRIKGLAEIDAIRSIVENLVDDLW*
Ga0116254_10386803	3300010311	Anaerobic Digestor Sludge	MKGGLRNEFIERVKTDFGSDFVVEEAEDLIHDLCDEIENRLLDICAELKRIKGLREIDAIRSIVEDLVDDLW*
Ga0116254_10707752	3300010311	Anaerobic Digestor Sludge	MKGGLRKEFIERVKTDFDSDFVVEEVEDLIHDLCDEIENRLLDICAELKRIKGLAEIDAIRSIVEDLVDDLW*
Ga0116245_100873263	3300010338	Anaerobic Digestor Sludge	MKGKLRKEFIEQMRAILDGDIVVEEVEDLIHDFCDEIENRLLDICAELKRIKGLAEIDIIRHAVEGLADDLW*
Ga0116245_105352791	3300010338	Anaerobic Digestor Sludge	LRKEFIERVKTDFDSDFIVEQVEDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIKNAVEELVDDLW*
Ga0116250_103672301	3300010340	Anaerobic Digestor Sludge	MKGELRKEFIERVKTDFDSDFIVEEVEDLIHELCDEVENRLLDVYYELKRIKGLAEIDIIKNAVEELVDDLW*
Ga0116250_103844342	3300010340	Anaerobic Digestor Sludge	MKGKLRKEFIERVETDLNRDFIVEEVEDLIHDLCDEIENRLLDVHDELKQIKGLTEIDAIRNTVEELMKDLW*
Ga0116250_104735312	3300010340	Anaerobic Digestor Sludge	MTRFKIEGKLRREFVERVETDLDRDHMVEEVKYLIHELCDEIKNRLLNVYYELKPIKGLTEIDPIRNAVEELVDDLW*
Ga0116250_108096262	3300010340	Anaerobic Digestor Sludge	MKGKLRREFVERAKTDFDSDFIVEQVEDLIHELCDEVENRLLNVYYELKRIKGLAEIDAIRS
Ga0116238_103976142	3300010347	Anaerobic Digestor Sludge	MKGGLRKEFIERVKTDFDSDFVVEEVEDLIHDLCDEIENRLLDICAELKRIKGLAEIDIIRRAVEGLADDLW*
Ga0179953_10966603	3300019243	Anaerobic Digestor Sludge	MKGKLRREFVERAKTDFDSDFIVEQVEDLIHELCDEVENRLLNVYYELKRIKGLAEIDAIKNAVEELVDDLW
Ga0209508_10419693	3300025471	Anaerobic Digestor Sludge	MKGKLREEFIEQMKAILDGDIVVEEVEDLIHDFCDEIENRLLDICAELKRIKGLAEIDIIRHAVEGLADDLW
Ga0209508_10744081	3300025471	Anaerobic Digestor Sludge	MKGKLRREFIERAKTDFDSDFIVEQVEDLIHELCDEVENRLLNVYYELKRIKGLAEIDIIRHAVEGLADDLW
Ga0209409_10663252	3300025589	Anaerobic Digestor Sludge	MKGKLRKEFIERVETDLDRDHMVEEVKYLIHELCDEIENILLHVCNELKRIDAIRDTLEELAKDLAD
Ga0209409_10880052	3300025589	Anaerobic Digestor Sludge	MKGKLRKEFIERVKTNFDNDFIVEEVEDLIHELCDEIENRLLDVYYELKRIEELADIDIIKNAVEKLADDLW
Ga0209409_11346272	3300025589	Anaerobic Digestor Sludge	MKGELRKEFIEQMRAILDGDIVVEEVEDLIHDFCDEIENRLLDICAELKRIKGLAEIDIIRHAVEGLADDLW
Ga0209720_10184346	3300025605	Anaerobic Digestor Sludge	MKGKLRKEFIEQMRAILDGDIVVEEVEDLIHDFCDEIENRLLDICAELKRIKGLAEIDIIRHAVEGLADDLW
Ga0209720_11057361	3300025605	Anaerobic Digestor Sludge	MKGKLRNEFIERVKTDFDSDFVVEEVEDLIHDLCDEIENRLLDVCAELKRIRGSREIDAIRSIVEDLVDDLW
Ga0209608_10147856	3300025609	Anaerobic Digestor Sludge	MKGKLRREFIERMRAILDGDIIVEEVEDLIHDFCDQIENRLLDVYYELKRIKGLAEIDIIRHAVEGLADDLW
Ga0209608_10682022	3300025609	Anaerobic Digestor Sludge	MKGKLRREFIERVKTDIGSNFIAEEVEDLVHELCDEVENRLLNVYYELKRIKGLTEIDAIRNTLEELVRDLW
Ga0208461_10251536	3300025613	Anaerobic Digestor Sludge	MKGGLRKEFIERVKTDFDSDFVVEEVEDLIHDLCDEIENRLLDICAELKRIKGLAEIDAVRNAVEDLVDDLW
Ga0208461_10543103	3300025613	Anaerobic Digestor Sludge	MKGKLRKEFIERMEAILDGDIVVEEVEDLIHDFCDQIENRLLDICAELKRIKGLAEIDIIRHAVEGLADDLW
Ga0208461_10714043	3300025613	Anaerobic Digestor Sludge	MKGGLRNEFIERVKTDFGSDFVVEEVEDLIHDLCDEIENRLLDICAELKRIKGLAEIDIIRR
Ga0208461_10978052	3300025613	Anaerobic Digestor Sludge	MKGKLRKEFIERAKTDFDSNFIVEEVEDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIKNAVEELVDDLW
Ga0208461_11551192	3300025613	Anaerobic Digestor Sludge	MKGGLRNEFIERVKTDFDNDFVVEEVEDLIHDLCDEIENRLLDICAELKRIKGLREIDAIRSIVEDLVDDLW
Ga0208461_11561861	3300025613	Anaerobic Digestor Sludge	RLRREFIERVKTDFDSDFIVEEVEDLIHELCDEVENRLLNVYYELKRIRGLTEIDAIKNTVEELVDDLW
Ga0208693_10787223	3300025618	Anaerobic Digestor Sludge	MKGKLRREFVERVKTDIGSNFIAEEVEDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIRSIVEDLVDDLW
Ga0208693_10906831	3300025618	Anaerobic Digestor Sludge	MKGKLRREFVERVKTDFDSDFIVEQVGDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIKNAVEELVTDLW
Ga0208824_10555422	3300025629	Anaerobic Digestor Sludge	MKGKLRKEFIERVETDFDSDFAVEEVEDLIHDLCDEIENRLLDVCAELKRIKGSREIDAIRSIVKDLMDDLW
Ga0209204_11079422	3300025631	Anaerobic Digestor Sludge	MKGKLRREFVERMEAILDGDIVVEEVEDLIHDFCDQIENRLLDICAELKRIKGLAEIDIIRHAMEGLADDLW
Ga0208198_10646123	3300025638	Anaerobic Digestor Sludge	MKGGLRNEFIERVKTDFGSDFVVEEVEDLIHDLCDEIENRLLDICAELKRIKGLAEIDIIRRAVEGLADDLW
Ga0208198_10646932	3300025638	Anaerobic Digestor Sludge	MKGGLRKEFIERVKTDFDSDFVVEEIEDLIHDLCDEIENRLLDICAELKRIKGLREIDAIRSIVENLVDDLW
Ga0208198_11141072	3300025638	Anaerobic Digestor Sludge	MKGGLRNEFIERVKTDFGSDFVVEEAEDLIHDLCDEIENRLLDVCAELKRIKGLREIDAIRSIVEDLVDDLW
Ga0208564_10702682	3300025683	Anaerobic Digestor Sludge	MKGKLRREFVERVKTDFDSDFIVEEVEDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIRSIVEDLVDDLW
Ga0208564_10878531	3300025683	Anaerobic Digestor Sludge	MKGELRKEFIERVKTDFDSDFIVEEVEDLIHELCDEVENRLLDVYYELKRIKGLAEIDIIKNAVEELVDDLW
Ga0209537_100687919	3300027510	Biogas Fermentantion	MKGKLRKEFIERMEAVLYGDIVEEEVEDLIHDFCDQIENRLLDVYYELKRIEGLTEIDIIRHAVEELMKDLW
Ga0209537_10473932	3300027510	Biogas Fermentantion	MKGKLRKEFIERMEAILDGDIVEEEVEDLIHGFCDEIENGLLDICAELKRIKGLAEIDIIRHAVEGLADDLW
Ga0209537_10513082	3300027510	Biogas Fermentantion	MKGKLRREFIERVKTDIGSNFIAEEVEDLIHELCDEVENRLLNVYYELKRIKGLTEIDTIRNAVEELVDDLW
Ga0209537_10513452	3300027510	Biogas Fermentantion	MKGKLRKEFIERVDAILDGDRMFQVEEEMKYLIHELCDEIENRLLNVYYELKRIRGLTEIDAIRNTVEELVDDLW
Ga0209537_10552303	3300027510	Biogas Fermentantion	VKGKLRREFIERVKTDFGSGFIVEEAEDLIHELCDEIENRLLNVYYELKRIRGLTEIDAIKNTVEELVDDLW
Ga0209537_10951101	3300027510	Biogas Fermentantion	MKGKLRREFIERVKTDIGSNFIAEEVEDLIHELCDEIENRLLNVYYELKRIKGLAEIDAIKNAVEELVDDLW
Ga0209537_10989832	3300027510	Biogas Fermentantion	MEEGKLRKEFIERVGTDLNGDFIVEEVEDLIHDLCDEIRNRLLDVYDELKLIEGLTEIDAIKSTVEELVKDLW
Ga0209537_11061341	3300027510	Biogas Fermentantion	MKGKLRKEFIERMEAVLYGDIVEEEVEDLIHDFCDEIENRLLDVYDELKRIEGLTEIDIIRNAVEELMKDLW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066555

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences