Metagenome / Metatranscriptome Family F066623

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066623
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	55 residues
Representative Sequence	VKGQSTQPVKVRSKEVSVHLGSYPGDGEGDRPVEAPGTEIRFGRVSERTGRNASEA
Number of Associated Samples	104
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.00 %
% of genes near scaffold ends (potentially truncated)	53.97 %
% of genes from short scaffolds (< 2000 bps)	73.02 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.841 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (11.111 % of family members)
Environment Ontology (ENVO)	Unclassified (17.460 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.921 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF08388	GIIM	15.87
PF00078	RVT_1	14.29
PF04392	ABC_sub_bind	3.17
PF12680	SnoaL_2	2.38
PF13683	rve_3	1.59
PF13338	AbiEi_4	0.79
PF14690	zf-ISL3	0.79
PF13847	Methyltransf_31	0.79
PF09992	NAGPA	0.79
PF13276	HTH_21	0.79
PF12705	PDDEXK_1	0.79
PF03050	DDE_Tnp_IS66	0.79
PF00908	dTDP_sugar_isom	0.79
PF05050	Methyltransf_21	0.79
PF15780	ASH	0.79
PF08031	BBE	0.79
PF01075	Glyco_transf_9	0.79
PF01381	HTH_3	0.79
PF01610	DDE_Tnp_ISL3	0.79
PF13809	Tubulin_2	0.79
PF13185	GAF_2	0.79
PF08808	RES	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.17
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.79
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme	Cell wall/membrane/envelope biogenesis [M]	0.79
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.79
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.79
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.84 %
Unclassified	root	N/A	28.57 %
Viruses	superkingdom	All Organisms → Viruses	1.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.84 %
Unclassified	root	N/A	28.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.32 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.59 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.59 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.59 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.79 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.79 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.79 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.38 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.59 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.79 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.79 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.38 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.59 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.79 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.79 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.59 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.79 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.79 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.79 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.59 %
unclassified Singulisphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera	0.79 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.79 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.79 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.59 %
Singulisphaera sp. GP187	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	0.79 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.79 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.79 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10772282	Not Available	551	Open in IMG/M
3300002024\|MIS_1071212	Not Available	1225	Open in IMG/M
3300002407\|C687J29651_10303282	Not Available	503	Open in IMG/M
3300002560\|JGI25383J37093_10064724	All Organisms → cellular organisms → Bacteria → Proteobacteria	1150	Open in IMG/M
3300002914\|JGI25617J43924_10136486	Not Available	852	Open in IMG/M
3300004463\|Ga0063356_100489785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1621	Open in IMG/M
3300005206\|Ga0068995_10093697	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300005332\|Ga0066388_100590893	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300005332\|Ga0066388_102298586	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300005440\|Ga0070705_101085276	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005445\|Ga0070708_100244939	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300005445\|Ga0070708_101538526	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005467\|Ga0070706_100195162	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300005467\|Ga0070706_100442564	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1210	Open in IMG/M
3300005467\|Ga0070706_100520484	Not Available	1106	Open in IMG/M
3300005467\|Ga0070706_101142380	Not Available	716	Open in IMG/M
3300005468\|Ga0070707_100063702	All Organisms → cellular organisms → Bacteria → Proteobacteria	3538	Open in IMG/M
3300005518\|Ga0070699_100167305	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300005531\|Ga0070738_10059334	All Organisms → cellular organisms → Bacteria → Proteobacteria	2309	Open in IMG/M
3300005536\|Ga0070697_100081712	All Organisms → cellular organisms → Bacteria	2663	Open in IMG/M
3300005536\|Ga0070697_100199146	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300005537\|Ga0070730_10361529	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300005540\|Ga0066697_10138180	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300005555\|Ga0066692_10056796	All Organisms → cellular organisms → Bacteria	2196	Open in IMG/M
3300005557\|Ga0066704_10469472	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300005713\|Ga0066905_100233259	Not Available	1401	Open in IMG/M
3300005713\|Ga0066905_100392106	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300005713\|Ga0066905_101235029	Not Available	669	Open in IMG/M
3300005764\|Ga0066903_105009743	Not Available	703	Open in IMG/M
3300005764\|Ga0066903_105645043	Not Available	658	Open in IMG/M
3300005764\|Ga0066903_107972290	Not Available	543	Open in IMG/M
3300005764\|Ga0066903_108584508	Not Available	520	Open in IMG/M
3300005833\|Ga0074472_10439855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1241	Open in IMG/M
3300006034\|Ga0066656_10837501	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300006057\|Ga0075026_100198575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1054	Open in IMG/M
3300006058\|Ga0075432_10218805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	761	Open in IMG/M
3300006796\|Ga0066665_10117880	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300006844\|Ga0075428_100054316	All Organisms → cellular organisms → Bacteria	4390	Open in IMG/M
3300006845\|Ga0075421_100382759	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300006852\|Ga0075433_10099355	All Organisms → cellular organisms → Bacteria → Proteobacteria	2576	Open in IMG/M
3300006871\|Ga0075434_100002449	All Organisms → cellular organisms → Bacteria	16338	Open in IMG/M
3300006881\|Ga0068865_102189728	Not Available	503	Open in IMG/M
3300006893\|Ga0073928_10081779	All Organisms → cellular organisms → Bacteria	2764	Open in IMG/M
3300006903\|Ga0075426_10226888	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300007076\|Ga0075435_100038163	All Organisms → cellular organisms → Bacteria	3829	Open in IMG/M
3300007076\|Ga0075435_101017239	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300007076\|Ga0075435_101971436	Not Available	513	Open in IMG/M
3300009012\|Ga0066710_100184310	All Organisms → cellular organisms → Bacteria → Proteobacteria	2953	Open in IMG/M
3300009012\|Ga0066710_100305321	All Organisms → cellular organisms → Bacteria	2333	Open in IMG/M
3300009088\|Ga0099830_10282084	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300009089\|Ga0099828_10427401	All Organisms → Viruses → Predicted Viral	1194	Open in IMG/M
3300009089\|Ga0099828_10570440	All Organisms → Viruses → Predicted Viral	1019	Open in IMG/M
3300009094\|Ga0111539_10111860	All Organisms → cellular organisms → Bacteria → Proteobacteria	3204	Open in IMG/M
3300009166\|Ga0105100_10542560	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	710	Open in IMG/M
3300009444\|Ga0114945_10022799	All Organisms → cellular organisms → Bacteria	3349	Open in IMG/M
3300009777\|Ga0105164_10457366	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300009811\|Ga0105084_1047150	Not Available	759	Open in IMG/M
3300009820\|Ga0105085_1011374	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300010046\|Ga0126384_10333325	Not Available	1259	Open in IMG/M
3300010046\|Ga0126384_11455553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300010047\|Ga0126382_11282308	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300010147\|Ga0126319_1295899	Not Available	524	Open in IMG/M
3300010341\|Ga0074045_10022905	All Organisms → cellular organisms → Bacteria → Proteobacteria	4852	Open in IMG/M
3300010358\|Ga0126370_10645012	Not Available	921	Open in IMG/M
3300010358\|Ga0126370_12412524	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300010376\|Ga0126381_102945583	Not Available	677	Open in IMG/M
3300011120\|Ga0150983_13185081	Not Available	548	Open in IMG/M
3300011120\|Ga0150983_14475058	Not Available	565	Open in IMG/M
3300011269\|Ga0137392_10014497	All Organisms → cellular organisms → Bacteria	5352	Open in IMG/M
3300011270\|Ga0137391_10061966	All Organisms → cellular organisms → Bacteria	3203	Open in IMG/M
3300011271\|Ga0137393_10163367	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300012189\|Ga0137388_11584645	Not Available	591	Open in IMG/M
3300012209\|Ga0137379_10332999	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300012212\|Ga0150985_118868363	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300012353\|Ga0137367_10058838	All Organisms → cellular organisms → Bacteria → Proteobacteria	2873	Open in IMG/M
3300012363\|Ga0137390_10819621	Not Available	888	Open in IMG/M
3300012469\|Ga0150984_122546850	Not Available	591	Open in IMG/M
3300012681\|Ga0136613_10754822	Not Available	519	Open in IMG/M
3300012918\|Ga0137396_10666253	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300012948\|Ga0126375_10106849	Not Available	1672	Open in IMG/M
3300012948\|Ga0126375_10601748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	840	Open in IMG/M
3300012948\|Ga0126375_10976636	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300012958\|Ga0164299_10963459	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300016319\|Ga0182033_10826743	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300016357\|Ga0182032_11526853	Not Available	580	Open in IMG/M
3300017997\|Ga0184610_1142131	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300018070\|Ga0184631_10143112	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300018084\|Ga0184629_10024173	All Organisms → cellular organisms → Bacteria	2558	Open in IMG/M
3300018422\|Ga0190265_13220890	Not Available	545	Open in IMG/M
3300019229\|Ga0180116_1191547	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300019259\|Ga0184646_1123041	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300019259\|Ga0184646_1256503	All Organisms → cellular organisms → Bacteria	2462	Open in IMG/M
3300019259\|Ga0184646_1351235	All Organisms → cellular organisms → Bacteria	2205	Open in IMG/M
3300019487\|Ga0187893_10017933	All Organisms → cellular organisms → Bacteria	9139	Open in IMG/M
3300022525\|Ga0242656_1096158	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300022557\|Ga0212123_10056099	All Organisms → cellular organisms → Bacteria	3546	Open in IMG/M
3300022694\|Ga0222623_10249314	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300025165\|Ga0209108_10306635	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300025174\|Ga0209324_10142048	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300025289\|Ga0209002_10088265	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300025313\|Ga0209431_10536922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	886	Open in IMG/M
3300025922\|Ga0207646_11942840	Not Available	501	Open in IMG/M
3300026025\|Ga0208778_1008439	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300026343\|Ga0209159_1085446	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300027006\|Ga0209896_1015762	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300027815\|Ga0209726_10000151	All Organisms → cellular organisms → Bacteria	142773	Open in IMG/M
3300027819\|Ga0209514_10036948	All Organisms → cellular organisms → Bacteria → Acidobacteria	3719	Open in IMG/M
3300027846\|Ga0209180_10466601	Not Available	710	Open in IMG/M
3300027862\|Ga0209701_10326520	Not Available	875	Open in IMG/M
3300027875\|Ga0209283_10481042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300027915\|Ga0209069_11055070	Not Available	502	Open in IMG/M
3300027952\|Ga0209889_1009152	All Organisms → cellular organisms → Bacteria	2479	Open in IMG/M
3300028792\|Ga0307504_10436290	Not Available	522	Open in IMG/M
3300029636\|Ga0222749_10021241	All Organisms → cellular organisms → Bacteria → Proteobacteria	2686	Open in IMG/M
3300030903\|Ga0308206_1142467	Not Available	571	Open in IMG/M
3300031545\|Ga0318541_10126914	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300031910\|Ga0306923_10533443	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300031949\|Ga0214473_10241043	All Organisms → cellular organisms → Bacteria	2081	Open in IMG/M
3300032164\|Ga0315283_10152912	All Organisms → cellular organisms → Bacteria	2463	Open in IMG/M
3300032180\|Ga0307471_100308212	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300032261\|Ga0306920_100242531	All Organisms → cellular organisms → Bacteria → Acidobacteria	2689	Open in IMG/M
3300032342\|Ga0315286_10113182	All Organisms → cellular organisms → Bacteria	2909	Open in IMG/M
3300032397\|Ga0315287_10026211	All Organisms → cellular organisms → Bacteria	6223	Open in IMG/M
3300032516\|Ga0315273_10320692	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300033417\|Ga0214471_11212813	Not Available	574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.89%
Host-Associated	Host-Associated	11.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.46%
Aquatic	Environmental → Aquatic	21.43%
Plants	Host-Associated → Plants	11.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.67%
Freshwater	Environmental → Aquatic → Freshwater	11.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.73%
Sediment	Environmental → Aquatic → Sediment	6.35%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.38%
Marine	Environmental → Aquatic → Marine	0.79%
Cave	Environmental → Terrestrial → Cave	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.27%
Loam	Environmental → Terrestrial → Soil → Loam	20.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.35%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.97%
Lake	Environmental → Aquatic → Freshwater → Lake	3.17%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.17%
Sand	Environmental → Terrestrial → Soil → Sand	3.17%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.59%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.79%
Ice	Environmental → Aquatic → Freshwater → Ice	0.79%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.79%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.35%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.97%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.17%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.17%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.59%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.59%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.59%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.59%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.59%
Unchlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.76%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.17%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.17%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.38%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.59%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.79%
Wastewater	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater	0.79%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.79%
Sinkhole Freshwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Sinkhole Freshwater	0.79%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.79%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.79%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.79%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.79%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.79%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002024	Sinkhole freshwater microbial communities from Lake Huron, USA - Flux 1k-1.5k	Environmental	Open in IMG/M
3300002407	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009777	Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_107722821	3300001593	Forest Soil	CAVKGESTQPVQVRPKEVSVRLGSYPGDGEGDRAVEAPGTEVRLGRASKCAGRNASEA*
MIS_10712122	3300002024	Sinkhole Freshwater	VKGQSTQPVQVRPKDVSVRLGSYPGDGEGDQAVEAPGTDIRVRWVSKRAGRNASEA*
C687J29651_103032821	3300002407	Soil	VKGKSTQPVKVRPKEVSVRLGSYPGDGEGDRPIEALGTETRGGRVSKRAGRNASEA*
JGI25383J37093_100647242	3300002560	Grasslands Soil	VQGQSTQPVQIRSKEVSVHLGSYPGGGEGDRAVEALGTEIRLGRVSERTGRNASEA*
JGI25617J43924_101364863	3300002914	Grasslands Soil	VQGQSAQPVKVRSKEVSVHLGSYPGDGEGDRPVEAPGTEIRFGRVSERTGRNASEA*
Ga0063356_1004897852	3300004463	Arabidopsis Thaliana Rhizosphere	VKGQSTQPVQVRSKEVSVHLGSYPGDGEGDRTVGAPGTEIRLGRVSKRTGRNASEA*
Ga0068995_100936972	3300005206	Natural And Restored Wetlands	VQGQSAQPVKVRSKEVSVRLGSYPGGGEGARTVEASGTEIRLGRVSERTGRNASEA*
Ga0066388_1005908931	3300005332	Tropical Forest Soil	VKGQSTQPVKVRSKEVSVHLGSYPGDGEGDRPVEAPGTEIRFGRVSERTGRNASEA*
Ga0066388_1022985863	3300005332	Tropical Forest Soil	VKGKSTQPVRVRPKEVSVGLGSYPGDGEGDQPIEALGTETRLGRVRKRAGRNASEA*
Ga0070705_1010852761	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VKGESTQPVKVRPKEVSVGLGSYPGDGKGDRSIEAPGTETRLGRVRKRAGRNASEPEQASKD*
Ga0070708_1002449392	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VQGQSTQPVKVRSKEVSVHLGSYPGDGEGDRPVEASGTEIRLGRVSERTGRNASEA*
Ga0070708_1015385262	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	PVQVRSKEVSVHLGSYPGGGEGDRAVEALGTEIRLGRVSERTGRNASEA*
Ga0070706_1001951621	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VRVRSKEVSVHLGSYPGDGEGDRAVEASGTEIRFGRVSERTGHNASEA
Ga0070706_1004425641	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VKVRSKEVSVHLGSYPGGGKGDRPVEASGTEIRLGRVSERTGRNASEA
Ga0070706_1005204842	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRVCREGQSTQPVQVRSKEVSVHLGSYPGDGEGDRPVEASGTEIRLGRVSERTGRNASEA
Ga0070706_1011423801	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VHLGSYPGDGEGDRAVEASGTEIRFGRVSERTGHNASEA*
Ga0070707_1000637025	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VQVRSKEVSVHLGSYPGGGEGDRAVEALGTEIRLGRVSERTGRNASEA*
Ga0070699_1001673053	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VQGQSTQPVRVRSKEVSVHLGSYPGDGEGDRAVEASGTEIRFGRVSERTGHNASEA*
Ga0070738_100593345	3300005531	Surface Soil	MSLVKVQPEELSVRLGSYPGDGKGDRPVGASGKEHTKGGCKRAGRNASEA*
Ga0070697_1000817124	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VQPVQVRSKEVSVRLGSYLGGGEGNRVVEAPGTEAHFGWVSKCAGRNVSEA*
Ga0070697_1001991462	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VSVPWKGKSTQPVQVRPKEVSVQLGSYPGDGEGDQTIEAPGTEARLSGRVSKRAGRNASEA*
Ga0070730_103615292	3300005537	Surface Soil	VQVRPKEVSVHLGSYPGDGEGDRTIEAPGTEARLSGRVSERAGRN
Ga0066697_101381801	3300005540	Soil	ECAVQGQSTQPVKVRSKEVSVHLGSYPGDGEGDRPVEASGTEIRLGRVSERTGRNASEA*
Ga0066692_100567962	3300005555	Soil	VKGQSTQPVQVRSKEVSVHLGSDPGDGEGDRTVGAPGTEIRLGRVSERTGRNASEA*
Ga0066704_104694722	3300005557	Soil	VKGESTQPVQVRPKEVSVHLGSYPGDGAGDQTIEAPGTKARLSGRVSKRAGRNASEA*
Ga0066905_1002332591	3300005713	Tropical Forest Soil	MQPVQVRSKEVSVRLGSYLDDWEGDRTVEAPGTTAHVRWVRKCAGRNASEA*
Ga0066905_1003921061	3300005713	Tropical Forest Soil	RECAVKGKSTQPVKVRPKEVSVRLGSYLGDGEGDQPIEAPGTETRLGRVRKRAGRNASEA
Ga0066905_1012350291	3300005713	Tropical Forest Soil	RECAVKGKSTQPVKVRPKEVSVRLGSYLGDGEGDQPIEALGTETRLGRVRKCAGRNASEA
Ga0066903_1050097432	3300005764	Tropical Forest Soil	VQGQSAQPVKVRSKEVSVHLGSYPGDGEGDRTVEASGTEIRLGRVSERTGRNASEA*
Ga0066903_1056450432	3300005764	Tropical Forest Soil	VQPVQVRSKEVSVRLGSYLGDGEGNRAVEAPGTEAHVWWASKCAGRNVSEA*
Ga0066903_1079722902	3300005764	Tropical Forest Soil	MQPVEVRSKEVSVRLGSYLEDGEGDRTVEAPGTTVHVRWASKCAGRNASEA*
Ga0066903_1085845081	3300005764	Tropical Forest Soil	TQPVKVRPKEVSVRLGSYLGDGEGDQPIEALGTETRLGRVRKRAGRNASEA*
Ga0074472_104398552	3300005833	Sediment (Intertidal)	VKGESTQPVRVRSEEVSVRLGSYPGDGEGDRAIEALGTEVRLGRASECTGRNASEA*
Ga0066656_108375011	3300006034	Soil	PVEVRPKEVSVRLGSYPGDGEGDRAIEAPGTEVRFGRASECTGRNASEA*
Ga0075024_1008537871	3300006047	Watersheds	HLGSYPGDGEGDRTVEASGTEIRRGRVCERTGRNASEA*
Ga0075026_1001985752	3300006057	Watersheds	VSVPWKGKSTQPVQVRPKEVSVHLGSYPGDGEGDRTIEAPGTEARLSGRVSERAGRNASEA*
Ga0075432_102188052	3300006058	Populus Rhizosphere	KEVSVHLGSYPGDGEGDRPVEASGTEIRHGRVSERTGRNASEA*
Ga0066665_101178801	3300006796	Soil	VKGQSTQPVKVRSKEVSVDLGSYPEDGEGDQSIEALGTETRLGRVSKCAGCNASEA*
Ga0075428_1000543164	3300006844	Populus Rhizosphere	VQGQATQPVKVRSKEVSVHLGSYPGDGEGDRPVEASGTEIRHGRVSERTGRNASEA*
Ga0075421_1003827592	3300006845	Populus Rhizosphere	TQPVKVRSKEVSVHLGSYPGDGEGDRPVEASGTEIRHGRVSERTGRNASEA*
Ga0075433_100993552	3300006852	Populus Rhizosphere	MSCECAVKGESVQPVEVRSKEVSVRLGSYLGDGEGDRAVEAPGTTAHFRWVSKCAGRNASEA*
Ga0075434_10000244916	3300006871	Populus Rhizosphere	VDCECAVKGESVQPVEVRSKEVSVRLGSYLGDGEGDRAVEAPGTTAHFRWVSKCAGRNASEA*
Ga0068865_1021897281	3300006881	Miscanthus Rhizosphere	VKGESTQPVKVRSKEVSVGLGSYLGDGEGDQSIEAPGTETRLGRVRKRAGRNASEA*
Ga0073928_100817795	3300006893	Iron-Sulfur Acid Spring	VKGQSTQPVKVRSKEVSVDLGSYPDDGEGDQSIEALGTETRLGWVSKCAGCNASEA*
Ga0075426_102268882	3300006903	Populus Rhizosphere	VCREKASQLQPVKVRPKEVSDILVATREGEGDQTIEAQGTEARLSGRVSERAGRNASEA*
Ga0075435_1000381638	3300007076	Populus Rhizosphere	MRPVQVRSKEVSVRLGSYLGDGEGNRAAEAPGTEAHIRWASKCAGRNASEA*
Ga0075435_1010172392	3300007076	Populus Rhizosphere	VRSKEVSVRLGSYLGDGEGDRAVEAPGTTAHFRWVSKCAGRNASEA*
Ga0075435_1019714361	3300007076	Populus Rhizosphere	VKGQSTQPVQVRSKEVSVHLGSYPGDGEGDRTVEAPGTETRLGRVSERTGRNASEA*
Ga0066710_1001843102	3300009012	Grasslands Soil	VQGQSTQPVKVRSKEVSVHLGSYPGDGEGDRAVEASGTEIRLGRVSERTGRNASEA
Ga0066710_1003053212	3300009012	Grasslands Soil	VKGQSTQPVKVRSKEVSVDLGSYPEDGEGDQSIEALGTETRLGRVSKCAGCNASEA
Ga0099830_102820843	3300009088	Vadose Zone Soil	AVKGQSTQPVTGLSKEVSVDLGSYPDDGAGDPSIEALGTETRPGRVSKCAGCNASEA*
Ga0099828_104274012	3300009089	Vadose Zone Soil	QCAVKGESTQPVRVRPKEVSVRLGSYPGDGEGDRTIEAPGTEARFGRVSEWVGRNASEA*
Ga0099828_105704401	3300009089	Vadose Zone Soil	PCQCAVKGESTQPVRVRPKEVSVRLGSYPGDGEGDRAVEAPGTEVRLGRASKCAGRNASEA*
Ga0111539_101118604	3300009094	Populus Rhizosphere	VQGQATQPVKVRSKEVSVRLGSYPGDGEGDRTVEASGTEIRHGRVSERTGRNASEA*
Ga0105100_105425602	3300009166	Freshwater Sediment	EGQSSQPVQVRSKAVSVHLGSYPGDGEGDRPVEASGTEIRLGRISKRTGRNASEA*
Ga0114945_100227991	3300009444	Thermal Springs	QSTQPVKVRSKEVSVHLGSYPGDGEGDRPVEASGTEIRLGRVSERTGRNASEA*
Ga0105164_104573661	3300009777	Wastewater	PVQVRPKEVSVRLGSYPGDGEGDRAVEAPGTEVRLGWASKCAGRNASEA*
Ga0105084_10471502	3300009811	Groundwater Sand	VKGESTQPVQVRPKEVSVRLGSYPGDGEGDRAIEAPGTEVRFGRASECTGRNASEA*
Ga0105085_10113741	3300009820	Groundwater Sand	PVKVRSKEVSVHLGSYPGDGEGDRPVEAPGTEIRLGRVSERTGRNASEA*
Ga0126384_103333252	3300010046	Tropical Forest Soil	CAVKGESMQPVQVRSKEVSVRLGSYLDDWEGDRTVEAPGTTAHVRWVRKCAGRNASEA*
Ga0126384_114555532	3300010046	Tropical Forest Soil	VKGESTPPVKVPPKQMSVGLGSYPGDGKGDQSIEAPGTETRLGRVCKRAG
Ga0126382_112823081	3300010047	Tropical Forest Soil	VKGKSTQPVKVRPKEVSVRLGSYLGDGEGDQPIEAPGTETRLGRVRKRAGRNASEA*
Ga0126319_12958991	3300010147	Soil	VTVRSKEVSVGLGSYPGDGEGDQSIEALGTETRLGRVRKRAGRNASEA*
Ga0074045_100229052	3300010341	Bog Forest Soil	VKGKSTQPVQVRPKEVSVRLGSYPGDVEGDRAVEAPGTEVRCWRASKCAGRNASEA*
Ga0126370_106450121	3300010358	Tropical Forest Soil	VRPKEVSVGLGSYLGDGEGDQSIEAPGTETRLGRVGKRAGRNASEA*
Ga0126370_124125242	3300010358	Tropical Forest Soil	PIRECAVKGESTQPVKVRSKEVSVGLGSYLGDGEGDQPIEALGTETRLGRVRKRAGRNASEA*
Ga0126381_1029455831	3300010376	Tropical Forest Soil	IRECAVKGQSTQPVKVRPKEVSVRLGSYLGDGEGDQPIEALGTETRLGRVRKRAGRNASEA*
Ga0150983_131850811	3300011120	Forest Soil	KGKSTQPVQVRPKEVSVHLGSYPGDGEGDRTIEAPGTEARLSGRVSERAGRNASEA*
Ga0150983_144750582	3300011120	Forest Soil	RERESVQPVQVRSKEVSVHLGSYSGDGKGNRAVEALGTKAHVWWVSKCTGRNASEA*
Ga0137392_100144975	3300011269	Vadose Zone Soil	VQGQSTQPVKVRSKEVSVHLGSYPGGGKGDRPVEASGTEIRLGRVSERTGRNASEA*
Ga0137391_100619661	3300011270	Vadose Zone Soil	VQGQSTQPVKVRSKEVAVHLGSYPGGGKGDRPVEASGTEIRLGRVSERTGRNASEA*
Ga0137393_101633672	3300011271	Vadose Zone Soil	MCNRKCKCAVKGESTQPVQVRPKEVSVRLGSYPGDGEGDRAVEAPGTEVRLGRASKCAGRNAREA*
Ga0137388_115846451	3300012189	Vadose Zone Soil	VQGQSTQPVQVRSKEVSVHLGSYPGDGEGDRAVEASGTEIRLGRVSERAGRNASE
Ga0137379_103329991	3300012209	Vadose Zone Soil	QPVQVRSKEVSVHLGSYPGDGEGNRPVEASGTEIRLGRVSERTGRNASEA*
Ga0150985_1188683631	3300012212	Avena Fatua Rhizosphere	GESTQPVKVRSKEVSVGLGSYPGDGEGDQSIEAPGTETRLGWVRKRAGRNASEA*
Ga0137367_100588384	3300012353	Vadose Zone Soil	PVKVRSKEVSVHLGSYPGDGEGDRPVEASGTEIRLGRVSERTGRNASEA*
Ga0137390_108196211	3300012363	Vadose Zone Soil	QSAQPVKVRSKEVSVHLGSYPGDGEGDRPVEAPGTEIRFGRVSERTGRNASEA*
Ga0150984_1225468502	3300012469	Avena Fatua Rhizosphere	CAVKGESTQPVKVRSKEVSVGLGSYPGDGEGDQSIEAPGTETRLGRVRKRAGRNASEA*
Ga0136613_107548221	3300012681	Polar Desert Sand	VQVRPKEVSVRLGSYPGDGEGDRAIEAPGTEVRFGRASECAGRNASEA*
Ga0137396_106662532	3300012918	Vadose Zone Soil	RSGDEVCAVNGKSTQPVRVRPKEVSVRLGSYPGDGEGDRPVEALGTNARFGRASKRAGRNASEA*
Ga0126375_101068491	3300012948	Tropical Forest Soil	ECAVQGQATQPVKVRSKEVSVHLGSYPGDGEGDRPVEASGTETRLGRVSERTSRNAREA*
Ga0126375_106017482	3300012948	Tropical Forest Soil	MKVRSKEVSVYLGSYSRDGEDDRPVEASGTETRLGRVSERTGRNASEA*
Ga0126375_109766362	3300012948	Tropical Forest Soil	SAQPVKVRSKKVSVHLGSYPGEGEGDRTVEASGTEIRLGWVSERTGRNASEA*
Ga0164299_109634591	3300012958	Soil	TQLVKVQPKEVSVHLGSDLGDGEGDQAIEAPGTQVRVRRVSKRAGRNASEA*
Ga0182033_108267431	3300016319	Soil	CAVKGESLQPVRVRSKEVSVRLGSYLGDGKGNRAVEALGTNAHVWWASKCAGRNASEA
Ga0182032_115268532	3300016357	Soil	SVECAVKGESLQPVRVRSKEVSVRLGSYLGDGKGNRAVEALGTNAHVWWASKCAGRNASE
Ga0184610_11421312	3300017997	Groundwater Sediment	DSTCAVKGESTQPVQVRSKEVSVRLGSYPGEGKGDRAIEAPGTEVRFGRASKCTGRNASE
Ga0184631_101431121	3300018070	Groundwater Sediment	KDDWECAVKGESTQPVRVRSEEVSVRLGSYPGDGEGDRPIEAPGTEVRFGRASKCAGRNASEA
Ga0184629_100241735	3300018084	Groundwater Sediment	VKGESTQPVQVRPKEVSVRLGSYPDDGEGDRAVEAPGTEVRFGRASKCAGRNASEA
Ga0190265_132208901	3300018422	Soil	PIRESARELAIRECAVKGESTQPVKVRSKEVSVGLGSYPGDGEGDQSIEAPGTETRLGRVRKRAGRNASEA
Ga0180116_11915471	3300019229	Groundwater Sediment	VRSKEVSVHLGSYPGDGEGDRAVEASGTEIRLGRVSERTGRNASEA
Ga0184646_11230412	3300019259	Groundwater Sediment	GESTQLVQVRPKEVSVRLGSYPGDGEGDRAVEAPGTQTRFGRVSKRMGRNASEA
Ga0184646_12565031	3300019259	Groundwater Sediment	VKGQSTQPVQVRSKEVSVHLGSYPGDGEGDRPVEAPGTEIRFGRVSERTGRNASEA
Ga0184646_13512353	3300019259	Groundwater Sediment	VQGQSTQPVKVRSKEVSVHLGSYPGDGEGDRPVEASGTEIRLGRVSERTGRNASEA
Ga0187893_100179333	3300019487	Microbial Mat On Rocks	VKGQSTQPLQVRSKEVSVHLGSYLGDGEGDRTVEAPGTEIRLGRVSERTGRNTSEA
Ga0242656_10961582	3300022525	Soil	ESESVQPVQVRSKEVSVHLGSDPGDGKGDRAVEALGTDAHVRWVSKCAGRNASEA
Ga0212123_100560991	3300022557	Iron-Sulfur Acid Spring	VKGQSTQPVKVRSKEVSVDLGSYPDDGEGDQSIEALGTETRLGWVSKCAGCNASEA
Ga0222623_102493142	3300022694	Groundwater Sediment	QSTQPVKVRSKEVSVHLGSYPRDGEGDRPVEASGTEIRLGRVSERTGRNASEA
Ga0209108_103066351	3300025165	Soil	KGKSTQPVRVRSKEVSVHLGSYPGGEEGDQIVEAPGTEVRFWRASKRAGRNASEA
Ga0209324_101420481	3300025174	Soil	QPVKVRSKEVSVHLGSYPGDGEGDRPVEASGTEIRLGRVSERTGRNASEA
Ga0209002_100882653	3300025289	Soil	VKGKSTQPVRVRSKEVSVHLGSYPGGEEGDQIVEAPGTEVRFGRASKRAGRNASEA
Ga0209431_105369221	3300025313	Soil	KVRSKEVSVHLGSYPGDGEGDRPVEASGTEIRLGRVSERTGRNASEA
Ga0207646_119428401	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GGTRTRKLSPRMRVCREGQSTQPVQVRSKEVSVHLGSYPGDGEGDRPVEASGTEIRLGRVSERTGRNASEA
Ga0208778_10084392	3300026025	Rice Paddy Soil	EVSVHLGSYPGDGEGDRPVEASGTEIRFGRVSERTGRNASEA
Ga0209159_10854462	3300026343	Soil	QKCECAVQGQSTQPVQIRSKEVSVHLGSYPGGGEGDRAVEALGTEIRLGRVSERTGRNASEA
Ga0209896_10157622	3300027006	Groundwater Sand	TQPVKVRSKEVSVHLGSYPGDGEGDRPVEASGTEIRLGRVSERTGRNASEA
Ga0209726_10000151132	3300027815	Groundwater	VKGQSTQPVQVRPKEVSVRLGSYPGDGEGDRAVEAPGTTVRPGRASKCAGRNASEA
Ga0209514_100369485	3300027819	Groundwater	VKGESTQPVRVRSEEVSVRLGSYPGDGEGDRAIEASGTKVRFWRASECAGRNASEA
Ga0209180_104666011	3300027846	Vadose Zone Soil	MCNRNCKCAVKGESTQPVQVRPKEVSVRLGSYPGDGEGDRAVEAPGTEVRLGRASKCAGRNASEA
Ga0209701_103265202	3300027862	Vadose Zone Soil	CAVKGESTQPVRVRPKEVSVRLGSYPGDGEGDRAVEAPGTEVRLGRASKCAGRNASEA
Ga0209283_104810421	3300027875	Vadose Zone Soil	VKGESTQPVRVRSEEVSVRLGSYPGDGEGDRPIEAPGTKVRFGRASECTG
Ga0209069_110550701	3300027915	Watersheds	SKEVSVHLGSYPGDGEGDRPVEASGTEIRLGRVSERTGRNASEA
Ga0209889_10091522	3300027952	Groundwater Sand	VQGQSTQPVKVRSKEVSVHLGSYPGDGEGDRPVEAPGTEIRLGRVSERTGRNVSEA
Ga0307504_104362902	3300028792	Soil	ECAVKGESTQPVKVRPKEVSVGLGSYPGDGEGDQSIEAPGTGTRLGRVRKRAGRNASEA
Ga0222749_100212413	3300029636	Soil	MQVRPKEVSVQLGSYPGDGEGDQNIEAPGTEARLSGRVSKRAGRNASEA
Ga0308206_11424672	3300030903	Soil	GESTQPVKVRPKEVSVGLGSDPGDGEGDQPIEALGTETRLGRVRKRAGRNASEA
Ga0318541_101269142	3300031545	Soil	LHDGSVECAVKGESLQPVRVRSKEVSVRLGSYLGDGKGNRAVEALGTNAHVWWASKCAGRNASEA
Ga0306923_105334432	3300031910	Soil	VECAVKGESLQPVRVRSKEVSVRLGSYLGDGKGNRAVEALGTNAHVWWASKCAGRNASEA
Ga0214473_102410431	3300031949	Soil	VRVCREGQSTQPVQVRSKEVSVHLGSYPGDGEGDRPVEASGTEIRLGRISERTGRNASEA
Ga0315283_101529125	3300032164	Sediment	VKGQSTQPVQVRPKDVSVRLGSYPGGGEGDQAVEAPGTEVRRGRASKCAGRNASEA
Ga0307471_1003082121	3300032180	Hardwood Forest Soil	VKSESVQPVQVRSKEVSVRLGSYLGGGEGNRVVEAPGTEAHFGWVSKCAGRNVSEA
Ga0306920_1002425312	3300032261	Soil	VKGESLQPVRVRSKEVSVRLGSYLGDGKGNRAVEALGTNAHVWWASKCAGRNASEA
Ga0315286_101131825	3300032342	Sediment	GESTQPVQVRPKEVSVRLGSYPGGGEGDQAVEAPGTEVRRGRASKCAGRNASEA
Ga0315287_100262116	3300032397	Sediment	VKGESTQPVQVRPKDVSVRLGSYPGGGEGDQAVEAPGTEVRRGRASKCAGRNASEA
Ga0315273_103206923	3300032516	Sediment	VKGKSTQPVRVRSKEVSVHLGSYPGGEEGDQIVEAPGTAVRFWRASKRAGRNASEA
Ga0214471_112128132	3300033417	Soil	VKGESTQPVQVRPKEVSVRLGSYPGDGEGDRAVEAPGTEVRLGRASKC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066623

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences