Metagenome / Metatranscriptome Family F066686

Basic Information
Family ID	F066686
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	61 residues
Representative Sequence	MKELQDIINDLQARLAIVGGGRIIITSDSVSIRLGEEHEDFEVQENQTDVEMYNQMWGQ
Number of Associated Samples	94
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.56 %
% of genes near scaffold ends (potentially truncated)	23.02 %
% of genes from short scaffolds (< 2000 bps)	68.25 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Unclassified (76.984 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (33.333 % of family members)
Environment Ontology (ENVO)	Unclassified (54.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.825 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.03% β-sheet: 11.49% Coil/Unstructured: 57.47%
Feature Viewer

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Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF06067	DUF932	19.84
PF01590	GAF	0.79
PF13589	HATPase_c_3	0.79
PF14743	DNA_ligase_OB_2	0.79
PF13884	Peptidase_S74	0.79
PF01068	DNA_ligase_A_M	0.79
PF03567	Sulfotransfer_2	0.79
PF04542	Sigma70_r2	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.79
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.79
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.79
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.79
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.79
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.98 %
All Organisms	root	All Organisms	23.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.98 %
Viruses	superkingdom	All Organisms → Viruses	12.70 %
cellular organisms	root	All Organisms → cellular organisms	10.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.32 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.90 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.79 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.90 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.90 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.90 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.79 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.90 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.79 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.90 %
Symmachiella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Symmachiella	0.79 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.90 %
Symmachiella dynata	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Symmachiella → Symmachiella dynata	0.79 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2236876003\|none_p069591	Not Available	523	Open in IMG/M
3300000101\|DelMOSum2010_c10025880	All Organisms → Viruses → Predicted Viral	3312	Open in IMG/M
3300001349\|JGI20160J14292_10020225	All Organisms → cellular organisms → Bacteria	3788	Open in IMG/M
3300001349\|JGI20160J14292_10069687	Not Available	1425	Open in IMG/M
3300001352\|JGI20157J14317_10019270	Not Available	3979	Open in IMG/M
3300005747\|Ga0076924_1048037	Not Available	3401	Open in IMG/M
3300005748\|Ga0076925_1000527	Not Available	10809	Open in IMG/M
3300005934\|Ga0066377_10008116	All Organisms → cellular organisms → Bacteria	2633	Open in IMG/M
3300006026\|Ga0075478_10053136	All Organisms → Viruses → Predicted Viral	1327	Open in IMG/M
3300006026\|Ga0075478_10080083	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
3300006752\|Ga0098048_1004887	All Organisms → cellular organisms → Bacteria	5205	Open in IMG/M
3300006752\|Ga0098048_1029730	Not Available	1784	Open in IMG/M
3300006752\|Ga0098048_1037404	All Organisms → Viruses → Predicted Viral	1561	Open in IMG/M
3300006752\|Ga0098048_1071756	Not Available	1066	Open in IMG/M
3300006793\|Ga0098055_1144987	Not Available	915	Open in IMG/M
3300006810\|Ga0070754_10028427	All Organisms → cellular organisms → Bacteria	3153	Open in IMG/M
3300006869\|Ga0075477_10133587	Not Available	1044	Open in IMG/M
3300006870\|Ga0075479_10261938	Not Available	683	Open in IMG/M
3300006870\|Ga0075479_10288901	Not Available	645	Open in IMG/M
3300006916\|Ga0070750_10109919	All Organisms → Viruses → Predicted Viral	1272	Open in IMG/M
3300006916\|Ga0070750_10169138	Not Available	981	Open in IMG/M
3300006919\|Ga0070746_10180344	All Organisms → Viruses → Predicted Viral	1015	Open in IMG/M
3300006990\|Ga0098046_1010887	Not Available	2477	Open in IMG/M
3300006990\|Ga0098046_1021955	Not Available	1607	Open in IMG/M
3300007345\|Ga0070752_1406562	Not Available	501	Open in IMG/M
3300007346\|Ga0070753_1222264	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300007539\|Ga0099849_1262698	Not Available	632	Open in IMG/M
3300008012\|Ga0075480_10315943	Not Available	789	Open in IMG/M
3300009440\|Ga0115561_1014495	All Organisms → Viruses → Predicted Viral	4116	Open in IMG/M
3300009677\|Ga0115104_10518730	Not Available	1634	Open in IMG/M
3300009722\|Ga0123378_118403	Not Available	510	Open in IMG/M
3300010135\|Ga0123382_1028435	Not Available	771	Open in IMG/M
3300010149\|Ga0098049_1033690	Not Available	1659	Open in IMG/M
3300010149\|Ga0098049_1040948	Not Available	1492	Open in IMG/M
3300010296\|Ga0129348_1052149	All Organisms → Viruses → Predicted Viral	1473	Open in IMG/M
3300010300\|Ga0129351_1119227	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
3300010300\|Ga0129351_1270452	Not Available	647	Open in IMG/M
3300010936\|Ga0137784_1229310	Not Available	2056	Open in IMG/M
3300012920\|Ga0160423_10005083	Not Available	10756	Open in IMG/M
3300013188\|Ga0116834_1041497	Not Available	842	Open in IMG/M
3300013188\|Ga0116834_1145423	Not Available	522	Open in IMG/M
3300013230\|Ga0116814_1009432	Not Available	1020	Open in IMG/M
3300016747\|Ga0182078_10422946	All Organisms → Viruses → Predicted Viral	1163	Open in IMG/M
3300016749\|Ga0182053_1443204	Not Available	545	Open in IMG/M
3300017752\|Ga0181400_1002209	Not Available	7694	Open in IMG/M
3300017763\|Ga0181410_1060074	Not Available	1150	Open in IMG/M
3300017818\|Ga0181565_10062495	All Organisms → Viruses → Predicted Viral	2673	Open in IMG/M
3300017818\|Ga0181565_10296617	Not Available	1086	Open in IMG/M
3300017824\|Ga0181552_10009371	Not Available	6457	Open in IMG/M
3300017824\|Ga0181552_10044318	Not Available	2643	Open in IMG/M
3300017949\|Ga0181584_10552896	Not Available	702	Open in IMG/M
3300017949\|Ga0181584_10680438	Not Available	616	Open in IMG/M
3300017951\|Ga0181577_10198047	Not Available	1344	Open in IMG/M
3300017951\|Ga0181577_10475822	Not Available	784	Open in IMG/M
3300017951\|Ga0181577_10943368	Not Available	511	Open in IMG/M
3300017952\|Ga0181583_10667716	Not Available	620	Open in IMG/M
3300017956\|Ga0181580_10565456	Not Available	736	Open in IMG/M
3300017956\|Ga0181580_10998572	Not Available	518	Open in IMG/M
3300017964\|Ga0181589_10757828	Not Available	604	Open in IMG/M
3300017967\|Ga0181590_10275041	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Symmachiella → Symmachiella dynata	1234	Open in IMG/M
3300017967\|Ga0181590_10873725	Not Available	593	Open in IMG/M
3300017968\|Ga0181587_10169525	Not Available	1529	Open in IMG/M
3300017968\|Ga0181587_10351748	Not Available	982	Open in IMG/M
3300017969\|Ga0181585_10261749	All Organisms → Viruses → Predicted Viral	1216	Open in IMG/M
3300017985\|Ga0181576_10310531	Not Available	1002	Open in IMG/M
3300017986\|Ga0181569_10149465	Not Available	1655	Open in IMG/M
3300018036\|Ga0181600_10299001	Not Available	810	Open in IMG/M
3300018041\|Ga0181601_10098328	Not Available	1899	Open in IMG/M
3300018418\|Ga0181567_10091617	Not Available	2116	Open in IMG/M
3300018418\|Ga0181567_10523325	Not Available	773	Open in IMG/M
3300018423\|Ga0181593_11063347	Not Available	552	Open in IMG/M
3300018426\|Ga0181566_10169259	Not Available	1632	Open in IMG/M
3300018426\|Ga0181566_10886552	Not Available	605	Open in IMG/M
3300019267\|Ga0182069_1647938	Not Available	693	Open in IMG/M
3300019459\|Ga0181562_10000657	All Organisms → cellular organisms → Bacteria	28180	Open in IMG/M
3300020174\|Ga0181603_10076030	Not Available	1629	Open in IMG/M
3300020174\|Ga0181603_10367759	Not Available	534	Open in IMG/M
3300020175\|Ga0206124_10165356	Not Available	886	Open in IMG/M
3300020177\|Ga0181596_10031534	All Organisms → cellular organisms → Bacteria	3441	Open in IMG/M
3300020188\|Ga0181605_10295997	Not Available	680	Open in IMG/M
3300020194\|Ga0181597_10232338	Not Available	868	Open in IMG/M
3300020194\|Ga0181597_10325191	Not Available	676	Open in IMG/M
3300020264\|Ga0211526_1004733	Not Available	2283	Open in IMG/M
3300020276\|Ga0211509_1086360	Not Available	718	Open in IMG/M
3300020289\|Ga0211621_1043622	Not Available	635	Open in IMG/M
3300020314\|Ga0211522_1004543	Not Available	3371	Open in IMG/M
3300020323\|Ga0211673_1001867	Not Available	6042	Open in IMG/M
3300020325\|Ga0211507_1000358	Not Available	12477	Open in IMG/M
3300020391\|Ga0211675_10000003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	184324	Open in IMG/M
3300020420\|Ga0211580_10010094	Not Available	4246	Open in IMG/M
3300020424\|Ga0211620_10011016	Not Available	4007	Open in IMG/M
3300020469\|Ga0211577_10004999	Not Available	11575	Open in IMG/M
3300021347\|Ga0213862_10148575	Not Available	824	Open in IMG/M
3300021356\|Ga0213858_10071586	Not Available	1688	Open in IMG/M
3300021356\|Ga0213858_10158392	All Organisms → Viruses → Predicted Viral	1105	Open in IMG/M
3300021364\|Ga0213859_10080756	Not Available	1544	Open in IMG/M
3300021364\|Ga0213859_10147433	Not Available	1107	Open in IMG/M
3300021364\|Ga0213859_10443251	Not Available	570	Open in IMG/M
3300021368\|Ga0213860_10359054	Not Available	633	Open in IMG/M
3300021375\|Ga0213869_10007622	All Organisms → cellular organisms → Bacteria	6701	Open in IMG/M
3300021425\|Ga0213866_10000181	All Organisms → cellular organisms → Bacteria	52427	Open in IMG/M
3300021957\|Ga0222717_10000552	All Organisms → cellular organisms → Bacteria	32063	Open in IMG/M
3300021957\|Ga0222717_10285439	Not Available	947	Open in IMG/M
3300021958\|Ga0222718_10000404	All Organisms → cellular organisms → Bacteria	45320	Open in IMG/M
3300021958\|Ga0222718_10508107	Not Available	581	Open in IMG/M
3300021964\|Ga0222719_10004833	Not Available	11756	Open in IMG/M
3300022074\|Ga0224906_1005537	Not Available	5296	Open in IMG/M
3300023087\|Ga0255774_10212327	Not Available	993	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10027555	Not Available	3958	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10034700	All Organisms → Viruses → Predicted Viral	3392	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10055096	Not Available	2478	Open in IMG/M
3300023117\|Ga0255757_10160350	Not Available	1243	Open in IMG/M
3300023178\|Ga0255759_10490590	Not Available	723	Open in IMG/M
3300023180\|Ga0255768_10553421	Not Available	568	Open in IMG/M
3300023709\|Ga0232122_1067174	Not Available	870	Open in IMG/M
3300025070\|Ga0208667_1004708	Not Available	3805	Open in IMG/M
3300025610\|Ga0208149_1058551	Not Available	981	Open in IMG/M
3300025751\|Ga0208150_1261861	Not Available	519	Open in IMG/M
3300025759\|Ga0208899_1218399	Not Available	592	Open in IMG/M
3300025769\|Ga0208767_1098973	Not Available	1173	Open in IMG/M
3300025769\|Ga0208767_1209160	Not Available	647	Open in IMG/M
3300025853\|Ga0208645_1257759	Not Available	576	Open in IMG/M
3300025870\|Ga0209666_1331398	Not Available	590	Open in IMG/M
3300025880\|Ga0209534_10006168	All Organisms → cellular organisms → Bacteria	10464	Open in IMG/M
3300025880\|Ga0209534_10040785	All Organisms → Viruses → Predicted Viral	3071	Open in IMG/M
3300031766\|Ga0315322_10003028	Not Available	13032	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	35.71%
Coastal	Environmental → Aquatic → Marine → Coastal	24.60%
Oceanic	Environmental → Aquatic → Marine → Oceanic	14.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified	14.29%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.76%
Inlet	Environmental → Aquatic → Marine → Inlet	2.38%
Strait	Environmental → Aquatic → Marine → Strait	2.38%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.59%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	33.33%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	24.60%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	14.29%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	12.70%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.76%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.38%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	2.38%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.59%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.59%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.79%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	33.33%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	15.08%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	12.70%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	8.73%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	7.14%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.97%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	3.97%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	2.38%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.38%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	2.38%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.59%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.79%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.79%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.79%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.79%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.79%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.79%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.79%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2236876003	Estuarine microbial communities from Columbia River, sample from South Channel ETM site, GS313-0p8-ETM-15m	Environmental	Open in IMG/M
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300005747	Seawater microbial communities from Vineyard Sound, MA, USA - control T14	Environmental	Open in IMG/M
3300005748	Seawater microbial communities from Vineyard Sound, MA, USA - control T7	Environmental	Open in IMG/M
3300005934	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009440	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512	Environmental	Open in IMG/M
3300009677	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009722	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_241_18m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010135	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_257_18m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010936	Marine microbial communities from surface seawater of North Pacific Subtropical Gyre ? Stn. ALOHA, 15m	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300013188	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 6m_Station1_GOM_Metagenome	Environmental	Open in IMG/M
3300013230	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station5_GOM_Metagenome	Environmental	Open in IMG/M
3300016747	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016749	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011512AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019267	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071402VT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020174	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020264	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556116-ERR599158)	Environmental	Open in IMG/M
3300020276	Marine microbial communities from Tara Oceans - TARA_E500000075 (ERX289007-ERR315858)	Environmental	Open in IMG/M
3300020289	Marine microbial communities from Tara Oceans - TARA_B100000242 (ERX556122-ERR599019)	Environmental	Open in IMG/M
3300020314	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556135-ERR598974)	Environmental	Open in IMG/M
3300020323	Marine microbial communities from Tara Oceans - TARA_B100001027 (ERX555979-ERR599120)	Environmental	Open in IMG/M
3300020325	Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX556073-ERR598966)	Environmental	Open in IMG/M
3300020391	Marine microbial communities from Tara Oceans - TARA_B100000989 (ERX556130-ERR598967)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020424	Marine microbial communities from Tara Oceans - TARA_B100000242 (ERX556056-ERR599138)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021375	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300023087	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023117	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG	Environmental	Open in IMG/M
3300023178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300023709	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025870	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300031766	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
none_0695911	2236876003	Marine Estuarine	LIMKELQDIINDLQARLAIVGGGRIIITSDSVSIRLGEEHEDFEVQENQTDVEMYNQMWG
DelMOSum2010_1002588010	3300000101	Marine	MEELQNIINDLQARLAIVGGGRIIITSDNCSVSLGKEHEDFEVQENQTDVEMYNQMWGQ*
JGI20160J14292_100202258	3300001349	Pelagic Marine	MKELQDIINDLQARLAIVGGGRIIITSDNCSVSLGKEHEDFEVQENQTDVEMYNQMWGQ*
JGI20160J14292_100696872	3300001349	Pelagic Marine	MKELQDIINDLQARLAIVGGGRIIITSDSVSIRLGEEHEDFEVQENQTDVEMYNQMWGQ*
JGI20157J14317_100192707	3300001352	Pelagic Marine	MEELQNIINDLQARLAIVGGGRIIITSDSVSIRLGEEHEDFEVQENQTDVEMYNQMWGQ*
Ga0076924_10480375	3300005747	Marine	MKELQEMINDLQARLAIVGGGRIIITSENCSISLGEEHEDFEVQENRTDVEMYNQMWGQ*
Ga0076925_100052722	3300005748	Marine	LTASTEYTILVGIDMKELQEMINDLQARLAIVGGGRIIITSENCSISLGEEHEDFEVQENRTDVEMYNQMWGQ*
Ga0066377_100081166	3300005934	Marine	MEELQNTINDLQARLAIVGGGRIIITSDHVSIRLGREHEYFEVQEQSVDDSLAEPDVEMFKTIYNY*
Ga0075478_100531364	3300006026	Aqueous	MEELQNTINDLQARLAIVGGGRIIITSDHVSIRLGKEHEYFEVQEQSVDDSLAEPDVEMFKTIYNY*
Ga0075478_100800833	3300006026	Aqueous	MKELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHEDFEVQENGTDVEMYNQMWGQ*
Ga0098048_100488716	3300006752	Marine	MEELQNTINDLQARLAIVGGGRIIITSDRVSIRLGAEHENFEVQENEVDVEMHKQMFNY*
Ga0098048_10297304	3300006752	Marine	MQELQNIINDLQARLAIVGGGRIIITSESVSVRLGEEHEDFEVQENQADVEMYNQMWGQ*
Ga0098048_10374041	3300006752	Marine	MEELQDIINNLQARLAIVGGGRIIITSDNCSVSLGKEHEDFEVQENQTDVEMYNQMWGQ*
Ga0098048_10717562	3300006752	Marine	MEELQNTINDLQARLAIVGGGRIIITSDHVSVRLGREHEYFEVQEQSPFDSPNEVDVEMHKQMYNY*
Ga0098055_11449873	3300006793	Marine	MEELQNTINDLQARLAIVGGGRIIITSDHVSIRLGAEHENFEVQENEVDVEMHKQMFNY*
Ga0070754_100284271	3300006810	Aqueous	MKELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHENFEVQENEVDVEMYNQMWGQ*
Ga0075477_101335873	3300006869	Aqueous	MKELQEMINDLQARLAIVGGGRIIITSDSVSIRLGEEHENFEVQENGVDVEMYNQMWGQ*
Ga0075479_102619382	3300006870	Aqueous	MQELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHEDFEVQENGTDVEMYNQMWGQ*
Ga0075479_102889011	3300006870	Aqueous	VQKKHLTTSTESIIVVGIDMKELQDIINDLQARLAIVGGGRIIITSESVSVSLGQEHEDFEIQENGVDVEMYNQMWGQ*
Ga0070750_101099194	3300006916	Aqueous	MTELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHEDFEVQENEPDVEMYNQMWGQ*
Ga0070750_101691383	3300006916	Aqueous	MEELQNTINDLQARLAIVGGGRIIITSDSVSIRLGEEHEDFEIQENRTDVEMYNQMWGQ*
Ga0070746_101803443	3300006919	Aqueous	MKELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHEDFEVQENEPDVEMYNQMWGQ*
Ga0098046_10108876	3300006990	Marine	MQELQNIINDLQARLAIVGGGRIIITSESVSVRLGEEHEDFEVQENQTDVEMYNQMWGQ*
Ga0098046_10219553	3300006990	Marine	MEELQNTINDLQARLAIVGGGRIIITSDHVSVRLGREHEYFEVQEQSSFDSLNEVDVEMHKQMYNY*
Ga0070752_14065621	3300007345	Aqueous	MQELQDIINNLQARLAIVGGGRIIITSDHVSISLGEEHENFEVQENGTDVEMYNQMWGQ*
Ga0070753_12222641	3300007346	Aqueous	TINDLQARLAIVGGGRIIITSDHVSIRLGREHEYFEVQEQSVDDSLAEPDVEMFKTIYNY
Ga0099849_12626982	3300007539	Aqueous	MQELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMYNQMWGQ*
Ga0075480_103159431	3300008012	Aqueous	QARLAIVGGGRIIITSDSVSIRLGEEHENFEVQENGVDVEMYNQMWGQ*
Ga0115561_101449511	3300009440	Pelagic Marine	MKELQDIINDLQARLAIVGGGRIIITSDSVSIRLGEEHEDFEVQENQTD
Ga0115104_105187305	3300009677	Marine	MKELQDIINDLQARLAIVGGGRIIITSDHVSIRLGEEHENFEVQEKSSCDSLTNPDVEMYNQMWGQ*
Ga0123378_1184032	3300009722	Marine	MQELQDIINNLQARLAIVGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMYNQMWGQ*
Ga0123382_10284353	3300010135	Marine	MKELQEIINDLQARLAIVGGGRIIITSDHVSIRLGEEHENFEIQENEVDVEMYNQLWGQ*
Ga0098049_10336903	3300010149	Marine	MEELQNTINDLQARLARVGGGRIIITSDHVSIRLGKEHEYFEVQEQSPFDSPNEVDVEMHKQMYNY*
Ga0098049_10409482	3300010149	Marine	MQELQNIINDLQARLAIVGGGRIIITSESVSIRLGEEHEDFEVQENQTDVEMYNQMWGQ*
Ga0129348_10521493	3300010296	Freshwater To Marine Saline Gradient	MEELQDIINNLQTRLESCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMYNQMWGQ*
Ga0129351_11192274	3300010300	Freshwater To Marine Saline Gradient	MQELQETINDLQARLKNCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMYNQMWGQ*
Ga0129351_12704521	3300010300	Freshwater To Marine Saline Gradient	RLAIVGGGRIIITSDHVSIRLGKEHEYFEVQEESPFDSPNEVDVEMHKQMYNY*
Ga0137784_12293102	3300010936	Marine	MKELQDIINDLQARLAIVGGGRIIITSDDVSIRLGEEHENFEVQEKSSCDSLTNPDVEMYNQMWGQ*
Ga0160423_1000508316	3300012920	Surface Seawater	MEELQNTINDLQARLARVGGGRIIITSDHVSIRLGAEHENFEVQENEVDVEMHKQMFNY*
Ga0116834_10414971	3300013188	Marine	MKELQDTINDLQARLAIVGGGRIIITSDHVSIRLGKEHEYFEVQEQSPFDSPSEVDVEMHKQMYNY*
Ga0116834_11454231	3300013188	Marine	MEELQNTINDLQARLAIVGGGRIIITSDHVSIRLGREHEYFEVQEESPFDSPNEVDVEMH
Ga0116814_10094323	3300013230	Marine	VSIIVVGIDMKELQEIINDLQARLAIVGGGRIIITSDHVSIRLGEEHENFEIQENGVDVEMYNQMWGQ*
Ga0182078_104229464	3300016747	Salt Marsh	MQELQEMINDLQARLQNCGGGRIIITSDSVSIRLGEEHENFEVQENEVDVEMYNQMWGQ
Ga0182053_14432042	3300016749	Salt Marsh	LIMEELQNIINDLQARLAIVGGGRIIITSDNCSVSLGKEHEDFEVQENQADVEMYN
Ga0181400_10022099	3300017752	Seawater	MQELQNIINDLQARLAIVGGGRIIITSESVSIRLGEEHEDFEVQENQTDVEMYNQMWGQ
Ga0181410_10600743	3300017763	Seawater	MKELQDIINDLQARLAIVGGGRIIITSDHVSISLGEEHENFEVQEKSSCDSLTNPDVEMYNQMWGQ
Ga0181565_100624957	3300017818	Salt Marsh	MKELQEMINDLQARLAIVGGGRIIITSDHVSIRLGEEHENFEIQENGVDVEMYNQMWGQ
Ga0181565_102966173	3300017818	Salt Marsh	MEELQNIINDLQARLAIVGGGRIIITSDNVSIRLGEEHEDFEVQENQTDVEMYNQMWGQ
Ga0181552_1000937110	3300017824	Salt Marsh	MEELQNIINDLQARLAIVGGGRIIITSDNCSVSLGKEHEDFEVQENQADVEMYNQMWGQ
Ga0181552_100443182	3300017824	Salt Marsh	MQELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMHNQMWGQ
Ga0181584_105528963	3300017949	Salt Marsh	MQELQDIINNLQARLESCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMYNQMWGQ
Ga0181584_106804381	3300017949	Salt Marsh	PNLLFLLVLIMKELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHEDFEVQENGTDVEMYNQMWGQ
Ga0181577_101980474	3300017951	Salt Marsh	MKELQEMINDLQARLAIVGGGRIIITSDHVSIRLGEEHENFEVQENGVDVEMYEQMWGQ
Ga0181577_104758222	3300017951	Salt Marsh	MQELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHENFEVQENEVDVEMYNQMWGQ
Ga0181577_109433682	3300017951	Salt Marsh	MKELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHEDFEVQENGTDVEMYNQMWGQ
Ga0181583_106677163	3300017952	Salt Marsh	MEELQDIIYNLQARLESCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMYNQMWGQ
Ga0181580_105654562	3300017956	Salt Marsh	MEELQDMINNLQARLESCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMYNQMWGQ
Ga0181580_109985723	3300017956	Salt Marsh	LQARLAIVGGGRIIITSESVSVDLGEEHEDFEIQENGVDVEMYNQMWGQ
Ga0181589_107578282	3300017964	Salt Marsh	MKELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMYNQMWGQ
Ga0181590_102750411	3300017967	Salt Marsh	QQTPNLLFLLVLIMKELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMYNQMWGQ
Ga0181590_108737251	3300017967	Salt Marsh	QQTPNLLFLLVLIMKELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHEDFEVQENGTDVEMYNQMWGQ
Ga0181587_101695252	3300017968	Salt Marsh	MQELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMYNQMWGQ
Ga0181587_103517481	3300017968	Salt Marsh	MKELQDTINDLQARLAIVGGGRIIITSDHVSIRLGKEHEYFEVQEESPFDSPNEVDVEMHKQMYNY
Ga0181585_102617492	3300017969	Salt Marsh	LLVLIMKELQEMINDLQARLAIVGGGRIIITSDHVSIRLGEEHENFEVQENGVDVEMYEQMWGQ
Ga0181576_103105313	3300017985	Salt Marsh	MEELQDIINNLQARLESCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMYNQMWGQ
Ga0181569_101494653	3300017986	Salt Marsh	MEELQNIINDLQARLAIVGGGRIIITSDNVSIRLGEEHEDFEIQENRTDVEMYNQMWGQ
Ga0181600_102990012	3300018036	Salt Marsh	MEELQDIINNLQARLAIVGGGRIIITSDHVSISLGEEHENFEVQENEPDVEMYNQMWGQ
Ga0181601_100983284	3300018041	Salt Marsh	MKELQDTINDLQARLAIVGGGRIIITSDHVSIRLGKEHEYFEVQEQSPFDSPSEVDVEMHKQMYNY
Ga0181567_100916174	3300018418	Salt Marsh	MEELQNIINDLQARLAIVGGGRIIITSDHVSIRLGKEHEDFEVQENQTDVEMYNQMWGQ
Ga0181567_105233251	3300018418	Salt Marsh	MKELQEMINDLQARLQNCGGGRIIITSDSVSIRLGEEHEHFEVQENATDVEMYNQMWGQ
Ga0181593_110633472	3300018423	Salt Marsh	MKELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHENFEVQENEVDVEMYNQMWGQ
Ga0181566_101692591	3300018426	Salt Marsh	INNLQARLESCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMYNQMWGQ
Ga0181566_108865521	3300018426	Salt Marsh	LIMEELQDIINNLQARLAIVGGGRIIITSDSVSIRLGEEHEDFKVQENGTDVEMYNQMWG
Ga0182069_16479381	3300019267	Salt Marsh	QETINDLQARLQNCGGGRIIITSDSVSIRLGEEHENFEVQENEVDVEMYNQMWGQ
Ga0181562_100006578	3300019459	Salt Marsh	MEELQNIINDLQARLAIVGGGRIIITSDNCSVSLGKEHEDFEVQENQTDVEMYNQMWGQ
Ga0181603_100760304	3300020174	Salt Marsh	NDLQARLAIVGGGRIIITSDHVSIRLGKEHEYFEVQEQSPFDSPSEVDVEMHKQMYNY
Ga0181603_103677593	3300020174	Salt Marsh	ELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMHNQMWGQ
Ga0206124_101653562	3300020175	Seawater	MKELQDIINDLQARLAIVGGGRIIITSDNCSVSLGKEHEDFEVQENQTDVEMYNQMWGQ
Ga0181596_100315342	3300020177	Salt Marsh	MINDLQARLAIVGGGRIIITSDHVSIRLGEEHENFEVQENEVDVEMYNQMWG
Ga0181605_102959971	3300020188	Salt Marsh	AQNLLFLLVLIMQELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMHNQMWGQ
Ga0181597_102323383	3300020194	Salt Marsh	QNLLFLLVLIMEELQDIINNLQARLAIVGGGRIIITSDHVSISLGEEHENFEVQENEPDVEMYNQMWGQ
Ga0181597_103251913	3300020194	Salt Marsh	MEELQNTINDLQARLAIVGGGRIIITSDHVSVRLGKEHEYFEVQEQSPFDSPSEVDVEMHKQMYNY
Ga0211526_10047335	3300020264	Marine	MKELQDIINDLQARLAIVGGGRIIITSDHVSVSLGAEHENFEIQENEFDVDMNKQMYNY
Ga0211509_10863603	3300020276	Marine	MKELQDIINDLQSRLAIVGGGRIIITSDHVSINLGKEHEYFEVQEQSSFDSPSEVDVEMHKQM
Ga0211621_10436221	3300020289	Marine	MKELQDIINDLQARLAIVGGGRIIITSDHVSISLGKEHEYFEVQENRTDYD
Ga0211522_10045433	3300020314	Marine	VSIIVVGIDMNEVQEIINDLQARLSIVGGGRIIITSDHVSIRLGEEHENFEVQENGVDVEMYNQMWGQ
Ga0211673_100186710	3300020323	Marine	MKELQDIINDLQARLAIVGGGRIIITSDHVSISLGEEHENFEVQEKSSCDSLANPDVEMYNQIWGQ
Ga0211507_10003586	3300020325	Marine	LTRSGVSIIVVGIDMNEVQEIINDLQARLSIVGGGRIIITSDHVSIRLGEEHENFEVQENGVDVEMYNQMWGQ
Ga0211675_10000003136	3300020391	Marine	MKELQDIINDLQARLAIVGGGRIIITSDDVSISLGEEHENFEVQEKSSCDSLTNPDVEMYNQMWGQ
Ga0211580_100100949	3300020420	Marine	MKELQDIINDLQARLAIVGGGRIIITSDHVSIRLGEEHENFEVQEKSSCDSLTNPDVEMYNQMWGQ
Ga0211620_100110164	3300020424	Marine	MKELQDIINDLQARLAIVGGGRIIITSDHVSISLGEEHENFEVQEKSSCDSPINPDVEMFTQMWGQ
Ga0211577_1000499917	3300020469	Marine	MKELQDIINDLQARLAIVGGGRIIITSDHVSISLGEEHENFEIQEGLTKDQTDVEMYNQMWGQ
Ga0213862_101485752	3300021347	Seawater	MEELQDIINNLQARLAIVGGGRIIITSDSVSIRLGEEHENFEVQENEVDVEMYNQMWGQ
Ga0213858_100715864	3300021356	Seawater	MEELQNTINDLQARLAIVGGGRIIITSDHVSIRLGREHEYFEVQEQSVDDSLAEPDVEMFKTIYNY
Ga0213858_101583924	3300021356	Seawater	VQEKLLTTSTESIIVVGIDMKELQEMINDLQARLAIVGGGRIIITSESVSVDLGEEHEDFEIQENGVDVEMYNQMWGQ
Ga0213859_100807564	3300021364	Seawater	MEELQNTINDLQARLAIVGGGRIIITSDHVSIRLGREHEYFEVQEQSVDDSLAEPDVEMFKKIYNY
Ga0213859_101474333	3300021364	Seawater	MKELQDTINDLQARLAIVGGGRIIITSDHVSICLGKEHEYFEVQEESPFDSPNEVDVEMHKQMYNY
Ga0213859_104432512	3300021364	Seawater	MKELQDIINDLQTRLQNCGGGRIIITSEDCSIRLGEEHEDFELLETEVDVEM
Ga0213860_103590543	3300021368	Seawater	LVLIMKELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHEHFEVQENETDVEMYEQMWGQ
Ga0213869_100076222	3300021375	Seawater	MEELQNTINDLQARLAIVGGGRIIITSDHVSISLGAEHENFEVQENEVDVEMHKQMHNY
Ga0213866_1000018116	3300021425	Seawater	MKELQDIINDLQARLAIVGGGRIIITSDHVSIRLGKEHEYFEVQEQSPFDSPSEVDVEMHKQMYNY
Ga0222717_1000055265	3300021957	Estuarine Water	LTASTEYTILVGIDMKELQEMINDLQARLAIVGGGRIIITSENCSISLGEEHEDFEVQENRTDVEMYNQMWGQ
Ga0222717_102854392	3300021957	Estuarine Water	MEELQNIIHDLQARLAIVGGGRIIITSDNCSVSLGKEHEDFEVQENQTDVEMYNQMWGQ
Ga0222718_1000040444	3300021958	Estuarine Water	MEELQNIIHDLQARLAIVGGGRIIITSESVSVSLGEEHEDFEIQENQTDVEMYNQMWGQ
Ga0222718_105081072	3300021958	Estuarine Water	MEELQNTINDLQARLAIVGGGRIIITSDHVSIRLGKEHEYFEVQEQSVDDSLAEPDVEM
Ga0222719_1000483325	3300021964	Estuarine Water	MEELQNTINDLQARLAIVGGGRIIITSDHVSIRLGKEHEYFEVQEQSVDDSLAEPDVEMFKTIYNY
Ga0224906_10055378	3300022074	Seawater	MEELQNTINDLQARLAIVGGGRIIITSDHVSIRLGREHEYFEVQEQSSFDSPNEVDVEMHKQMYNY
Ga0255774_102123273	3300023087	Salt Marsh	MINDLQARLAIVGGGRIIITSDHVSIRLGEEHENFEVQENGVDVEMYEQMWGQ
(restricted) Ga0233432_100275555	3300023109	Seawater	MKELQEMINDLQARLAIVGGGRIIITSENCSISLGEEHEDFEVQENRTDVEMYNQMWGQ
(restricted) Ga0233432_100347003	3300023109	Seawater	MKELQDIINDLQARLAIVGGGRIIITSDSVSIRLGEEHEDFEVQENQTDVEMYNQMWGQ
(restricted) Ga0233432_100550964	3300023109	Seawater	MQELQNIINDLQARLAIVGGGRIIITSESVSVRLGEEHEDFEVQENQTDVEMYNQMWGQ
Ga0255757_101603505	3300023117	Salt Marsh	ETINDLQARLQNCGGGRIIITSDSVSIRLGEEHENFEVQENETDVEMYNQMWGQ
Ga0255759_104905902	3300023178	Salt Marsh	LIMKELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHEDFEVQENGTDVEMYKQMWG
Ga0255768_105534212	3300023180	Salt Marsh	LIMKELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHEDFEVQENGTDVEMYNQMWG
Ga0232122_10671743	3300023709	Salt Marsh	IMEELQNIINDLQARLAIVGGGRIIITSDNCSVSLGKEHEDFEVQENQADVEMYNQMWGQ
Ga0208667_10047087	3300025070	Marine	MQELQNIINDLQARLAIVGGGRIIITSESVSVRLGEEHEDFEVQENQADVEMYNQMWGQ
Ga0208149_10585513	3300025610	Aqueous	MEELQNTINDLQARLAIVGGGRIIITSDHVSIRLGKEHEYFEVQEQSVDDSLAEPDV
Ga0208150_12618612	3300025751	Aqueous	MKELQEMINDLQARLAIVGGGRIIITSDSVSIRLGEEHENFEVQENGVDVEMYNQMWGQ
Ga0208899_12183992	3300025759	Aqueous	MEELQNTINDLQARLAIVGGGRIIITSDSVSIRLGEEHEDFEIQENRTDVEMYNQMWGQ
Ga0208767_10989731	3300025769	Aqueous	MEELQNTINDLQARLAIVGGGRIIITSDHVSIRLGREHEYFEVQEQSVDDSLA
Ga0208767_12091601	3300025769	Aqueous	RXECKKSTXQQAQSLLFLLVLIMKELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHEDFEVQENEPDVEMYNQMWGQ
Ga0208645_12577591	3300025853	Aqueous	NLLFLLVLIMQELQETINDLQARLQNCGGGRIIITSDSVSIRLGEEHENFEVQENEVDVEMYNQMWGQ
Ga0209666_13313981	3300025870	Marine	LTTSTEYTILVGIDMKELQEMINDLQARLAIVGGGRIIITSENCSISLGEEHEDFEVQENRTDVEMY
Ga0209534_1000616827	3300025880	Pelagic Marine	LTRSGVSIIVVGIDMHELQEIINDLQARLAIVGGGRIIITSDNVSIRLGEEHEDFEIQENRTDVEMYNQMWGQ
Ga0209534_100407858	3300025880	Pelagic Marine	MEELQNIINDLQARLAIVGGGRIIITSDSVSIRLGEEHEDFEVQENQTDVEMYNQMWGQ
Ga0315322_1000302811	3300031766	Seawater	MEELQNTINDLQARLAIVGGGRIIITSDHVSISLGREHEYFEVQEQSPFDSSNEVDVEMHKQMYNH

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters