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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F066751 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 126 |
| Average Sequence Length | 46 residues |
| Representative Sequence | ATHTLHPQLLDEELVLESPVFEQLGVFPDDRRHMLAKREHVRALAGI |
| Number of Associated Samples | 105 |
| Number of Associated Scaffolds | 126 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 96.03 % |
| % of genes from short scaffolds (< 2000 bps) | 95.24 % |
| Associated GOLD sequencing projects | 100 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.58 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (90.476 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.429 % of family members) |
| Environment Ontology (ENVO) | Unclassified (26.190 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (61.111 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 44.00% β-sheet: 0.00% Coil/Unstructured: 56.00% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.58 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 126 Family Scaffolds |
|---|---|---|
| PF07992 | Pyr_redox_2 | 91.27 |
| PF00180 | Iso_dh | 3.97 |
| PF04371 | PAD_porph | 1.59 |
| PF01593 | Amino_oxidase | 0.79 |
| PF01734 | Patatin | 0.79 |
| PF14257 | DUF4349 | 0.79 |
| PF08668 | HDOD | 0.79 |
| COG ID | Name | Functional Category | % Frequency in 126 Family Scaffolds |
|---|---|---|---|
| COG2957 | Agmatine/peptidylarginine deiminase | Amino acid transport and metabolism [E] | 1.59 |
| COG1752 | Predicted acylesterase/phospholipase RssA, containd patatin domain | General function prediction only [R] | 0.79 |
| COG3621 | Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR | General function prediction only [R] | 0.79 |
| COG4667 | Predicted phospholipase, patatin/cPLA2 family | Lipid transport and metabolism [I] | 0.79 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 90.48 % |
| All Organisms | root | All Organisms | 9.52 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 21.43% |
| Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 11.11% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 9.52% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 7.14% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 5.56% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.76% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 3.97% |
| Boreal Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil | 3.97% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 3.17% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 3.17% |
| Host-Associated | Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated | 3.17% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 2.38% |
| Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 2.38% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.38% |
| Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 1.59% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 1.59% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 1.59% |
| Bog | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog | 1.59% |
| Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 1.59% |
| Freshwater | Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater | 0.79% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.79% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.79% |
| Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.79% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil | 0.79% |
| Permafrost | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost | 0.79% |
| Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 0.79% |
| Weathered Mine Tailings | Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings | 0.79% |
| Ectomycorrhiza | Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza | 0.79% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 0.79% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300001593 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 | Environmental | Open in IMG/M |
| 3300003368 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 | Environmental | Open in IMG/M |
| 3300004082 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3 | Environmental | Open in IMG/M |
| 3300004091 | Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
| 3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
| 3300004635 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
| 3300005591 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 | Environmental | Open in IMG/M |
| 3300005610 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 | Environmental | Open in IMG/M |
| 3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
| 3300005994 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 | Environmental | Open in IMG/M |
| 3300006055 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 | Environmental | Open in IMG/M |
| 3300006059 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012 | Environmental | Open in IMG/M |
| 3300006086 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 | Environmental | Open in IMG/M |
| 3300006162 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 | Environmental | Open in IMG/M |
| 3300006603 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300009510 | Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG | Host-Associated | Open in IMG/M |
| 3300009639 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 | Environmental | Open in IMG/M |
| 3300009645 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 | Environmental | Open in IMG/M |
| 3300009701 | Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG | Host-Associated | Open in IMG/M |
| 3300009709 | Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG | Host-Associated | Open in IMG/M |
| 3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Environmental | Open in IMG/M |
| 3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
| 3300010877 | Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010880 | Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300011271 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG | Environmental | Open in IMG/M |
| 3300012982 | Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield | Environmental | Open in IMG/M |
| 3300014158 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG | Environmental | Open in IMG/M |
| 3300014164 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG | Environmental | Open in IMG/M |
| 3300014492 | Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG | Environmental | Open in IMG/M |
| 3300014493 | Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG | Environmental | Open in IMG/M |
| 3300014501 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300015051 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300018025 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100 | Environmental | Open in IMG/M |
| 3300018026 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100 | Environmental | Open in IMG/M |
| 3300018034 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10 | Environmental | Open in IMG/M |
| 3300018046 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10 | Environmental | Open in IMG/M |
| 3300019890 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1 | Environmental | Open in IMG/M |
| 3300020021 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1 | Environmental | Open in IMG/M |
| 3300020061 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1 | Environmental | Open in IMG/M |
| 3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
| 3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
| 3300020582 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O | Environmental | Open in IMG/M |
| 3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
| 3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
| 3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
| 3300021181 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O | Environmental | Open in IMG/M |
| 3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
| 3300021403 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O | Environmental | Open in IMG/M |
| 3300021404 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O | Environmental | Open in IMG/M |
| 3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
| 3300021406 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O | Environmental | Open in IMG/M |
| 3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
| 3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
| 3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
| 3300021475 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300025633 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes) | Environmental | Open in IMG/M |
| 3300025679 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes) | Environmental | Open in IMG/M |
| 3300026319 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes) | Environmental | Open in IMG/M |
| 3300027164 | Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027517 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027559 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027609 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027648 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027737 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027812 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027908 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027911 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes) | Environmental | Open in IMG/M |
| 3300028882 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3 | Environmental | Open in IMG/M |
| 3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
| 3300029636 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300029910 | III_Palsa_E2 coassembly | Environmental | Open in IMG/M |
| 3300029913 | III_Bog_N3 coassembly | Environmental | Open in IMG/M |
| 3300029914 | III_Bog_E2 coassembly | Environmental | Open in IMG/M |
| 3300029915 | III_Bog_E1 coassembly | Environmental | Open in IMG/M |
| 3300029953 | II_Bog_E3 coassembly | Environmental | Open in IMG/M |
| 3300029956 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2 | Environmental | Open in IMG/M |
| 3300029990 | I_Fen_N2 coassembly | Environmental | Open in IMG/M |
| 3300030020 | II_Bog_N1 coassembly | Environmental | Open in IMG/M |
| 3300030051 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2 | Environmental | Open in IMG/M |
| 3300030053 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2 | Environmental | Open in IMG/M |
| 3300030056 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3 | Environmental | Open in IMG/M |
| 3300030294 | II_Fen_E3 coassembly | Environmental | Open in IMG/M |
| 3300030399 | II_Palsa_E2 coassembly | Environmental | Open in IMG/M |
| 3300030490 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3 | Environmental | Open in IMG/M |
| 3300030503 | III_Palsa_E3 coassembly | Environmental | Open in IMG/M |
| 3300030519 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3 | Environmental | Open in IMG/M |
| 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Host-Associated | Open in IMG/M |
| 3300030580 | II_Palsa_N1 coassembly | Environmental | Open in IMG/M |
| 3300030617 | II_Palsa_N2 coassembly | Environmental | Open in IMG/M |
| 3300030737 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2 | Environmental | Open in IMG/M |
| 3300030739 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3 | Environmental | Open in IMG/M |
| 3300030741 | Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly | Environmental | Open in IMG/M |
| 3300031258 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1 | Environmental | Open in IMG/M |
| 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Host-Associated | Open in IMG/M |
| 3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
| 3300031715 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05 | Environmental | Open in IMG/M |
| 3300031753 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515 | Environmental | Open in IMG/M |
| 3300031788 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2 | Environmental | Open in IMG/M |
| 3300031813 | Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA | Environmental | Open in IMG/M |
| 3300031837 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1 | Environmental | Open in IMG/M |
| 3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300034065 | Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5 | Environmental | Open in IMG/M |
| 3300034163 | Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI12635J15846_103429621 | 3300001593 | Forest Soil | NLVLESPVFEQLGVFPDDRRSMLAKREHVRTLAGL* |
| JGI12635J15846_106616212 | 3300001593 | Forest Soil | MHPQLLSEDLVVESPVFEQLGVFPDDRRRMLAKRDQVRSLAGI* |
| JGI12635J15846_107867181 | 3300001593 | Forest Soil | TLHPQLLEEDVVLESPVFEQLGVFPDDRRRMLAKRDHVRGLAGL* |
| JGI26340J50214_100362401 | 3300003368 | Bog Forest Soil | PQLLAEALMVEDPVFEHLGVFPDDRRRMLAKRDHVLGLAGL* |
| Ga0062384_1004968921 | 3300004082 | Bog Forest Soil | AHLLATHTMHPQLLTEELVLESPVFEKLGMFADDRKTMLAKRDHVRALAGI* |
| Ga0062387_1004576261 | 3300004091 | Bog Forest Soil | HTMYPQLLDENLVLESAVFEQLGVFPDERRSMLAKREQVRALAGL* |
| Ga0062389_1039099612 | 3300004092 | Bog Forest Soil | LATHTLHPQLLGEELVIESPVFEHLGVFPDDRRALLAKRDHVLSLAGL* |
| Ga0062388_1008581871 | 3300004635 | Bog Forest Soil | AHLLATHTMHPQLLDEELVLTSPVFEQLGVFPDDRRAMLAKRDQIRSVAGI* |
| Ga0070761_104545131 | 3300005591 | Soil | AAHTMHPELLGEEMVIDSPAFEQLGVFPDDRRRLLAKRDRILGLAGF* |
| Ga0070763_109628312 | 3300005610 | Soil | HLLATHTMYPQLLDEELVLESPVFEQLGVFPDDRRAMLAKREQVRTLAGM* |
| Ga0070766_102825862 | 3300005921 | Soil | SDLAGTVYAAHLLATHTLHEQLLSEEIVIENPVFEQLGVFPDDRRRMLAKREHVRSLAGI |
| Ga0066789_102094451 | 3300005994 | Soil | DLAGTVHAAHLLATHTMHPQLLSEELVLESPVFEQLGVFPDDRRAMLAKRDQIRSLAGI* |
| Ga0097691_11458351 | 3300006055 | Arctic Peat Soil | DETLVMESPVFEQLGVFPDDRRRMLAKRDHVLALAGT* |
| Ga0075017_1008712581 | 3300006059 | Watersheds | AGTVNAAHLLATHTMYPQLLSEELVFEDPVFAQLGFHPDERQAMIEKREHVRLIAGI* |
| Ga0075019_101431112 | 3300006086 | Watersheds | ELVLESPVFEQLSVFPDDRRRVLAKRDQVRSLAGI* |
| Ga0075030_1004876731 | 3300006162 | Watersheds | EEIVFESPVFERLGVFPDDRRAMLAKRDHVRSVAGF* |
| Ga0074064_114538132 | 3300006603 | Soil | VHAAHLLATHTLHPQLLNEELVVENPVFEQLGVFPDDRRRMLAKRDHVRTLAGI* |
| Ga0116230_113050142 | 3300009510 | Host-Associated | QLLTEEEVMESPVFEQLGVFPDDRKAMLAKREQVRGVAGI* |
| Ga0116122_12660312 | 3300009639 | Peatland | LATHTMYPQLLSEEIVLGDPVFEKLGVFPDDRRAMLAKRDHVRSLAGL* |
| Ga0116106_12242191 | 3300009645 | Peatland | QLLSEELVIESPVFEQLGVFPDNRKTMLAKREHVRSLAGI* |
| Ga0116228_109633711 | 3300009701 | Host-Associated | EHTLNPQLLAAELVLESPVFEQLGVFPDDRRAMLAKREHVQTLAGL* |
| Ga0116227_109191402 | 3300009709 | Host-Associated | EDLVLENPVFEHLGVFPDDRRALLEKRDHVRSLAGL* |
| Ga0116227_113285311 | 3300009709 | Host-Associated | LTEEVVLESPVFEQLGVFPDDRKIMVSKLDHVRALAGI* |
| Ga0099796_103044651 | 3300010159 | Vadose Zone Soil | TLHPQLLNEELVIDDPVFEHLGVFPDDRRRMLAKRDHVTALAGL* |
| Ga0136449_1031889522 | 3300010379 | Peatlands Soil | THTLHPQLLSEEVVVESPVFEQLGVFPDDRMAMLAKRDAVRSLAGV* |
| Ga0126356_101011162 | 3300010877 | Boreal Forest Soil | HTLHAQLLGEDMVIESPVFEQLGVFPDDRRRLLAKREQVLALAGM* |
| Ga0126356_107007861 | 3300010877 | Boreal Forest Soil | LYPELLSEELVYESPVFEQLGIFPDDRRAMLAKRDLVRSLAGV* |
| Ga0126356_111711552 | 3300010877 | Boreal Forest Soil | LDEALVIESPVFEQLGVFPDDRRQLLTKRDHVRSLAGM* |
| Ga0126350_115703141 | 3300010880 | Boreal Forest Soil | QLLDEALVLESPVFEQLGVFPDDRRRMLEKRDHVLALAGI* |
| Ga0126350_123471472 | 3300010880 | Boreal Forest Soil | LATHTMYPELLSEELVLESPVFEQLGVFPDDRRAMLAKRDFVRSLAGV* |
| Ga0137393_102208622 | 3300011271 | Vadose Zone Soil | DEQVVLESPVFEQLGVFPDDRRLMLAKRDHILSLAGT* |
| Ga0168317_10702301 | 3300012982 | Weathered Mine Tailings | GTVHAAHLFATHTLHPQCFSEERVVESAVFEHLGVFPDDRRTLLGKRDHVRSLAGL* |
| Ga0181521_100928513 | 3300014158 | Bog | LHPQLFSEELVLESGVFERLGVFPDDRKAMLAKREHVRSLAGI* |
| Ga0181532_103458561 | 3300014164 | Bog | LATHTLHPQLLSEEVVIESPVFEQLGVFPDDRKAMLAKRDAVRSLAGI* |
| Ga0182013_105077611 | 3300014492 | Bog | EALVIESPVFEQLGVFPDDRRLMLAKRDHVRSLAGL* |
| Ga0182016_104217071 | 3300014493 | Bog | AHLLATHTLHPQLLSEDLVIESPVFEHLGVFPDDRRALLAKREFVRSLAGV* |
| Ga0182024_116059231 | 3300014501 | Permafrost | VHAAHLLATHTMHPQLLVEALVVEDPVFEQLGVFPDDRRRLLAKRDHVLALAGI* |
| Ga0137414_11659373 | 3300015051 | Vadose Zone Soil | MYPQLLNEDVVLEDPVFEQLGIFLDNRKAMLAKSDHVRSLAGV* |
| Ga0187885_101305602 | 3300018025 | Peatland | YPQLLSEEIVLGDPVFEKLGVFPDDRRAMLAKRDHVRSLAGL |
| Ga0187857_101723921 | 3300018026 | Peatland | TMYPQLLSEEIVLEDPVFEKLGVFPDDRRAMLVRRDHVRSLAGL |
| Ga0187863_102602522 | 3300018034 | Peatland | GEDVVVESTVFEQLGLFHDDRLRMLAKREQVRATAGI |
| Ga0187851_104157742 | 3300018046 | Peatland | AGTVNAAHLFATHTLHPQLLDEDLVMQNPVFEHLGVFPDDRRELLAKRDHVRSLAGL |
| Ga0193728_13443841 | 3300019890 | Soil | HPLLFAEELVLESPVFEQLGVFPDDRRAILAKRDIVRSLAGV |
| Ga0193726_12968141 | 3300020021 | Soil | LHPQLLDEQVVLDDAVFEQLGVFPDDRRLMLAKRDHVRSLAGL |
| Ga0193716_11195621 | 3300020061 | Soil | HLFATHTLHPQLLDEQVVLDDAVFEQLGVFPDDRRLMLAKRDHVRSLAGL |
| Ga0210407_102640012 | 3300020579 | Soil | QLLDEALVIDSPVFEQLGVFPDDRRLLLTKRDHVRSLAGM |
| Ga0210403_114051732 | 3300020580 | Soil | LVGEELVLDSPVFEQLGVFPDERRAMLAKRESVRSLAGV |
| Ga0210395_110968481 | 3300020582 | Soil | AHLLATHTMYPQLLDENLVLESAVFEQLGVFPDDRRAMLAKREQVRALAGL |
| Ga0210404_106750521 | 3300021088 | Soil | LHPQLLDEHVVLESPVFEQLGVFPDDRRLMLAKRDHILRLAG |
| Ga0210406_108639391 | 3300021168 | Soil | DLAGTVHAAHLLATHTLHPQLLDEALVIDSPVFEQLGVFPDDRRLLLTKRDHVRSLAGM |
| Ga0210396_107247692 | 3300021180 | Soil | DENLVLESAVFEQLGVFPDDRRAMLAKREQVRALAGL |
| Ga0210396_111734441 | 3300021180 | Soil | AAHLLATHTLHPQLLSEEVVVESPVFEQLGVFPDDRMAMLARRDVVRSLAGV |
| Ga0210388_100161331 | 3300021181 | Soil | HLLAAHTMHPQLLGEELVLESPVFEQLSVFPDDRRRMLARRDQVRSLAGI |
| Ga0210388_117124492 | 3300021181 | Soil | LHPQLLDEELVVENPVFELLSVFPDDRRRMLAKRDQVRGLAGI |
| Ga0210393_100466584 | 3300021401 | Soil | TMHPQLLSEDLVIESPVFEQLGVFPDDRRRMLEKRDHVRSLAGI |
| Ga0210397_112118182 | 3300021403 | Soil | LHPQLLSEEVVMDDPVFAQLGVFPDDRRQMLAKREHVRSLAGL |
| Ga0210397_116262381 | 3300021403 | Soil | EELVIESPVFEQLGVFPDDRRQMLGKRDHVRSLAGL |
| Ga0210389_107127852 | 3300021404 | Soil | EMVLESPVFEQLGVFPDDRRRMLAKRDHVRALAGI |
| Ga0210389_113808292 | 3300021404 | Soil | TLHAELLGEDMVIESPVFEQLGVFPDDRRRLLAKREQVLALAGM |
| Ga0210387_118558822 | 3300021405 | Soil | MHPQLLGEELVLESPVFEQLSVFPDDRRRMLARRDQVRSLAGI |
| Ga0210386_101852133 | 3300021406 | Soil | THTLHPQLLDEHVVLESPVFEQLGVFPDDRRLMLAKRDHILKLAG |
| Ga0210386_108962871 | 3300021406 | Soil | LHPELLNEELVIESPVFEQLGVFPDDRRRMLAKRDHVRALAGM |
| Ga0210383_108935702 | 3300021407 | Soil | LASHTLHPQLLHEEMVLESPVFEQLGVFPDDRRRMLAKRDQVRGLAGV |
| Ga0210383_113192801 | 3300021407 | Soil | LHPLLLSEELVLESPVFEQLGIFPDERRAMLAKRDTVRSLAGV |
| Ga0210383_117564272 | 3300021407 | Soil | HSYLAGMVHAAHLLATHTLYPQLLTEATVIESPVFEQLGVFPDDRKAMLAKRDRVRSLAG |
| Ga0210394_103170181 | 3300021420 | Soil | SDLAGTVHAAHLLATHTLHPQLLSEEVVVESPVFEQLGVFPDDRMAMLARRDVVRSLAGV |
| Ga0210394_108551551 | 3300021420 | Soil | HAAHLLATHTLYPQLLTEAMVIESSVFEQLGVFPDDRKAMLAKRDRVRSLAGL |
| Ga0210391_102142461 | 3300021433 | Soil | NLAGTVHAAHLLATHTLHPQLLDDAVVLESPVFEQLGVFPDDRRLMLAKRDHVRSLAGL |
| Ga0210392_106971431 | 3300021475 | Soil | GTVHAAHLLATHTMYPQLLDEELVLESPVFEQLGVFPDDRRSMLAKREQVRTLAGI |
| Ga0210410_113667072 | 3300021479 | Soil | GTVHAAHLLAIHTLHPELLNEELVIDSPVFEQLGVFPDDRRRMLAKRDHVRALAGM |
| Ga0208480_10491482 | 3300025633 | Arctic Peat Soil | AHLLATHTMYPQLLDEALVLESPVFEQLGVFPDDRRSMLAKREQVRALAGM |
| Ga0207933_11598211 | 3300025679 | Arctic Peat Soil | SEKLVLESTVFEQLSVFPDDRRLMLAKRDRVRSLAGL |
| Ga0209647_10833622 | 3300026319 | Grasslands Soil | VHAAHLLATHTLNPQLLNEELVLESPVFEQLGVFPDDRRRMLAKREQVRASAGL |
| Ga0208994_10023332 | 3300027164 | Forest Soil | MYPQLLDEELVLESPVFEQLGVFPDDRRSMLAKREQVRSLAGI |
| Ga0209113_10004681 | 3300027517 | Forest Soil | RMLMRGMHTLHPQILIEEVVIEDPVFEQLGVFPDDRRQMLSKRDHVRSLAGL |
| Ga0209222_11045902 | 3300027559 | Forest Soil | TVHAAHLLAAHTMQPQLLDEDVVIDDPVFEQLGVFPDDRRRMLAKRDHVRALAGL |
| Ga0209221_11130322 | 3300027609 | Forest Soil | LAGTVHAAHLLATHTLHPQLLTEDIVAESPVFEHLGLFPDDRKVMLAKRDDVRALAGI |
| Ga0209420_10992602 | 3300027648 | Forest Soil | LSEELVMESPVFVELGVFPDDRRAMLAKRDHVRSLAGI |
| Ga0209038_101955522 | 3300027737 | Bog Forest Soil | LLAAHTLHAELITEDMVIESPVFEQLGLFPDDRRHMLAKRDHVRALAG |
| Ga0209656_100067741 | 3300027812 | Bog Forest Soil | LHPQLLAEALMVEDPVFEHLGVFPDDRRRMLAKRDHVLGLAGL |
| Ga0209006_101997713 | 3300027908 | Forest Soil | MDEALVLESPVFEQLGVFPDDRRRMLEKRDHVLALAGI |
| Ga0209698_103827212 | 3300027911 | Watersheds | MSVNPYLVLGSAVFEFLGVFPDERLAMLGKREQIRQFAGF |
| Ga0209698_104533072 | 3300027911 | Watersheds | ELVLESPVFEQLNVFPDDRRRVLAKRDQVRSLAGI |
| Ga0302154_103750991 | 3300028882 | Bog | HTMYPQLLSEDVVVDDPVFEKLGVFADGRRELLAKCEQVRILAGI |
| Ga0302154_105463202 | 3300028882 | Bog | MYPQLLSEEVVFEDPVFEQLGVFPDERRAMLEKRDHVLSLAGM |
| Ga0308309_111504282 | 3300028906 | Soil | VHAAHLLATHTMYPQLLDEELVLESPVFEQLGVFPDDRRSMLAKREQVRSLAGI |
| Ga0222749_104267201 | 3300029636 | Soil | HAAHLLAVHTLHPQLLNEELVIDSPVFEHLRVFPDDRRRMLAKRDHVRALAGM |
| Ga0311369_111505072 | 3300029910 | Palsa | ATHTLHPQLLDEELVLESPVFEQLGVFPDDRRHMLAKREHVRALAGI |
| Ga0311362_106001761 | 3300029913 | Bog | ATHSMYPQLLGEAIVLEDPVFEQLGVFPDDRRAMLAKRERVLSLAGL |
| Ga0311359_108901351 | 3300029914 | Bog | YPQLLGEAIVLEDPVFEQLGVFPDDRRAMLAKRERVLSLAGL |
| Ga0311358_104446412 | 3300029915 | Bog | AANLLAAHTLHPQLLGEDLVIDSPVFEHLGVFPDDRRALLEKRDHVRSLAGI |
| Ga0311343_103750131 | 3300029953 | Bog | QLLDEEVVMDSPVFEQLGVFPDDRRRMLAKRDHVRALAGI |
| Ga0311343_108947732 | 3300029953 | Bog | SDLAGTVHAANLLATYTLYPQLTSDDVVLENPVFEQLGVFPDDRKAMLAKRDHVRSLAGV |
| Ga0302150_103548612 | 3300029956 | Bog | AHTAEVLEDPVFMQLGVFPDERLAILAQRDRVAQLAGI |
| Ga0311336_104335812 | 3300029990 | Fen | TLYPQLLSEELVFESPVFEQLGVFPDDRRAMLAKRDLVRGLAGL |
| Ga0311344_105211142 | 3300030020 | Bog | AAHTLHPQLLGEDLVIDSPVFEHLGVFPDDRRALLEKRDHVRSLAGL |
| Ga0302195_104627752 | 3300030051 | Bog | GTVHAAHLLATHTLHPQLLDEEVVMDSPVFEQLGVFPDDRRRMLAKRDHVRALAGI |
| Ga0302177_101965761 | 3300030053 | Palsa | ATHTMYPQLLDEELVLESPVFEQLGVFPDDRRAMLAKREQVRTLAGM |
| Ga0302181_103111671 | 3300030056 | Palsa | HLLAAHTMHPQLLNENVVIDDPVFEQLGVFPDDRRRMLAKRDHVRALAGL |
| Ga0311349_119174091 | 3300030294 | Fen | DLAATVHAAHLLATHTMHPQLLDEQVVMESAVFEQLGVFPDDRRRMLGKREHVRSLAGI |
| Ga0311353_111733552 | 3300030399 | Palsa | TMYPQLLSEEVVFEDPVFEQLGVFPDERRAMLDKRDHVLSLAGM |
| Ga0302184_101007992 | 3300030490 | Palsa | HPLLLSEELVIDSPVFVELGVFPDERKSMLAKRDHVRSLAGI |
| Ga0311370_111852942 | 3300030503 | Palsa | THTMHPQLLDEDVVMESPVFEQLGVFPDNRRELLAKRDQVRTLAGI |
| Ga0302193_104018751 | 3300030519 | Bog | VHAANLLATYTLYPQLTSDDVVLENPVFEQLGVFPDDRKAMLAKRDHVRSLAGV |
| Ga0307511_103890312 | 3300030521 | Ectomycorrhiza | LATHTLHPQLLSEDLVLENPVFEQLGVFPDDRRAMLAKRDAVRSLAGV |
| Ga0311355_104784902 | 3300030580 | Palsa | AAHLLAMHTMHPQLLCEDVVMESPVFEQLGVFPDNRRELLAKRDQVRTLAGI |
| Ga0311356_102816171 | 3300030617 | Palsa | EELVLESPVFEQLGVFPDDRRAMLAKREQVRTLAGM |
| Ga0302310_102274082 | 3300030737 | Palsa | MHPQLLEEDVVIDDPVFEQLGVFPDDRRRMLAKRDHVRALAGL |
| Ga0302311_108025371 | 3300030739 | Palsa | VNAAHLLATHTMYPQLLDEELVLESPVFEQLGVFPDDRRAMLAKREQVRTLAGM |
| Ga0302311_108940371 | 3300030739 | Palsa | DLAGTVHAAHLLATHTLHPQLLDEELVMASPVFEQLGVFPDDRRVMLAKRDQIRSLAGI |
| Ga0265459_143019481 | 3300030741 | Soil | DENLVLGSAVFEQLGVFPDDRRAMLAKREHVRALAGL |
| Ga0302318_102552782 | 3300031258 | Bog | TVNAAHVLAIHTMYPQLLTEDIVLEDSVFEKLGIFPDERRAMLAKLDRVRGLAGL |
| Ga0265316_110820141 | 3300031344 | Rhizosphere | DLAATVHAAHLLATHTMHPQLLDENEVIESPVFEQLGVFPDDRRRMLAKRDQVRSMAGM |
| Ga0310686_1046190052 | 3300031708 | Soil | HAAHLLATYTLHPQLMDEALVLESPVFEHLGVFPDDRRRMLEKRDHVLALAGI |
| Ga0310686_1124572612 | 3300031708 | Soil | VNAAHLLATHTLYPQLLTEEMVIESPVFEQLGVFPDDRKAMLAKRDRVRSLAGF |
| Ga0310686_1162108682 | 3300031708 | Soil | QLLSEELVIESPVFVELGVFPDDRRAMLAKRDHVRSLAGI |
| Ga0307476_109697432 | 3300031715 | Hardwood Forest Soil | EELVLESPVFEQLGVFPDDRRSMLAKREQVCSLAGI |
| Ga0307477_111598531 | 3300031753 | Hardwood Forest Soil | EELVLESPVFEQLGVFPDDRRAMLAKRDVVRSLAGV |
| Ga0302319_107345091 | 3300031788 | Bog | LAGTVNAEHLLATHTLHPQLLGEELVVDSPVFEHLGVFPDDRRALLAKRDYVRALAGI |
| Ga0302319_118911041 | 3300031788 | Bog | LHPQLLGEDLVIDSPVFEHLGVFPDDRRALLEKRDHVRSLAGI |
| Ga0316217_103931691 | 3300031813 | Freshwater | LATHTMYPQLLGEDLVLESPVFEHLGVFPDERRAMLAKRDQVRSLAGF |
| Ga0302315_104722042 | 3300031837 | Palsa | DEELVVENEVFEQLGVFPDDRRRMVAKRDHVRGLAGI |
| Ga0311301_115703351 | 3300032160 | Peatlands Soil | THTLHPQLLSEEVVVESPVFEQLGVFPDDRRAMLAKRDAVRSLAGV |
| Ga0307471_1029541361 | 3300032180 | Hardwood Forest Soil | LATHTLHPQLLGDEMVIESPVFEQLGVFPDDRRRLLAKCEQVRALAGM |
| Ga0334827_170758_3_158 | 3300034065 | Soil | AHLLATHTLHPQLLSEDLVIESPVFEHLGVFPDDRRALLAKREFVRSLAGV |
| Ga0370515_0150596_20_184 | 3300034163 | Untreated Peat Soil | VHAAHLLATHTLHPQLLNEELVVENPVFELLGVFPDDRRRMLAKRDQVCALAGI |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |