Metagenome / Metatranscriptome Family F066961

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066961
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	87 residues
Representative Sequence	MQTVTDSFSHVLLFACPQCGSPLASACASTEKNLEVADAHWFNPHCHCGWTGPVIGVQAVKHWVEPWKTPVNIGPEAPGSCDGEP
Number of Associated Samples	73
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.89 %
% of genes near scaffold ends (potentially truncated)	17.46 %
% of genes from short scaffolds (< 2000 bps)	61.90 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.317 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (57.937 % of family members)
Environment Ontology (ENVO)	Unclassified (49.206 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (88.095 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 7.08% β-sheet: 30.97% Coil/Unstructured: 61.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.375.1.1: NE1680-like	d2hfqa1	2hfq	0.5743
e.10.1.1: Prokaryotic type I DNA topoisomerase	d1mw9x_	1mw9	0.53397
b.47.1.1: Prokaryotic proteases	d1ky9a2	1ky9	0.51674
d.16.1.2: PHBH-like	d3c96a2	3c96	0.5136
d.16.1.5: L-aminoacid/polyamine oxidase	d2ivda2	2ivd	0.50916

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00072	Response_reg	13.60
PF05974	DUF892	4.80
PF14417	MEDS	4.00
PF00990	GGDEF	4.00
PF13545	HTH_Crp_2	3.20
PF04972	BON	2.40
PF00719	Pyrophosphatase	1.60
PF07238	PilZ	1.60
PF07589	PEP-CTERM	1.60
PF12838	Fer4_7	1.60
PF00989	PAS	0.80
PF13426	PAS_9	0.80
PF08239	SH3_3	0.80
PF00583	Acetyltransf_1	0.80
PF12732	YtxH	0.80
PF02633	Creatininase	0.80
PF00027	cNMP_binding	0.80
PF13620	CarboxypepD_reg	0.80
PF02682	CT_C_D	0.80
PF13517	FG-GAP_3	0.80
PF00672	HAMP	0.80
PF12700	HlyD_2	0.80
PF01594	AI-2E_transport	0.80
PF13502	AsmA_2	0.80
PF13185	GAF_2	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	4.80
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	1.60
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.80
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.80
COG2049	5-oxoprolinase subunit B/Allophanate hydrolase subunit 1	Amino acid transport and metabolism [E]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.32 %
Unclassified	root	N/A	39.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.32 %
Unclassified	root	N/A	39.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.32 %
Unclassified	root	N/A	39.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	34.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.68 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.98 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.98 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.98 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101738779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3232	Open in IMG/M
3300001089\|JGI12683J13190_1026493	Not Available	507	Open in IMG/M
3300001154\|JGI12636J13339_1001794	All Organisms → cellular organisms → Bacteria	3577	Open in IMG/M
3300001471\|JGI12712J15308_10096473	Not Available	750	Open in IMG/M
3300001593\|JGI12635J15846_10000031	All Organisms → cellular organisms → Bacteria	79251	Open in IMG/M
3300001593\|JGI12635J15846_10000876	All Organisms → cellular organisms → Bacteria	26246	Open in IMG/M
3300001593\|JGI12635J15846_10004284	All Organisms → cellular organisms → Bacteria	12314	Open in IMG/M
3300001593\|JGI12635J15846_10040321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3643	Open in IMG/M
3300004080\|Ga0062385_10473471	Not Available	766	Open in IMG/M
3300004082\|Ga0062384_100110306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1490	Open in IMG/M
3300004092\|Ga0062389_101129086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300004152\|Ga0062386_100225668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1478	Open in IMG/M
3300004635\|Ga0062388_102083796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300005437\|Ga0070710_10551279	Not Available	796	Open in IMG/M
3300005534\|Ga0070735_10057212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2555	Open in IMG/M
3300005591\|Ga0070761_10010255	All Organisms → cellular organisms → Bacteria	5291	Open in IMG/M
3300005591\|Ga0070761_10240572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1080	Open in IMG/M
3300005602\|Ga0070762_10517862	Not Available	784	Open in IMG/M
3300005712\|Ga0070764_10175438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1190	Open in IMG/M
3300005921\|Ga0070766_10691771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300006176\|Ga0070765_100024043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4616	Open in IMG/M
3300006176\|Ga0070765_101180679	Not Available	723	Open in IMG/M
3300006176\|Ga0070765_102279936	Not Available	504	Open in IMG/M
3300006893\|Ga0073928_10007650	All Organisms → cellular organisms → Bacteria	13887	Open in IMG/M
3300006893\|Ga0073928_10624692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300009090\|Ga0099827_11878858	Not Available	522	Open in IMG/M
3300010343\|Ga0074044_10000157	All Organisms → cellular organisms → Bacteria	67649	Open in IMG/M
3300010343\|Ga0074044_10569105	Not Available	740	Open in IMG/M
3300011120\|Ga0150983_15485188	Not Available	848	Open in IMG/M
3300012202\|Ga0137363_10149512	Not Available	1833	Open in IMG/M
3300020004\|Ga0193755_1035111	Not Available	1656	Open in IMG/M
3300020579\|Ga0210407_10089866	All Organisms → cellular organisms → Bacteria → Acidobacteria	2323	Open in IMG/M
3300020579\|Ga0210407_10322048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1208	Open in IMG/M
3300020580\|Ga0210403_10000552	All Organisms → cellular organisms → Bacteria	38628	Open in IMG/M
3300020580\|Ga0210403_10019143	All Organisms → cellular organisms → Bacteria	5467	Open in IMG/M
3300020580\|Ga0210403_10025867	All Organisms → cellular organisms → Bacteria → Proteobacteria	4678	Open in IMG/M
3300020580\|Ga0210403_10039303	All Organisms → cellular organisms → Bacteria	3782	Open in IMG/M
3300020580\|Ga0210403_10095756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2404	Open in IMG/M
3300020580\|Ga0210403_10255077	All Organisms → cellular organisms → Bacteria → Acidobacteria	1439	Open in IMG/M
3300020580\|Ga0210403_10806427	Not Available	746	Open in IMG/M
3300020580\|Ga0210403_10902340	Not Available	697	Open in IMG/M
3300020581\|Ga0210399_10001788	All Organisms → cellular organisms → Bacteria	16751	Open in IMG/M
3300020581\|Ga0210399_10011714	All Organisms → cellular organisms → Bacteria	6869	Open in IMG/M
3300020581\|Ga0210399_10069310	All Organisms → cellular organisms → Bacteria	2854	Open in IMG/M
3300020581\|Ga0210399_10075779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2727	Open in IMG/M
3300020581\|Ga0210399_10086695	All Organisms → cellular organisms → Bacteria → Acidobacteria	2547	Open in IMG/M
3300020581\|Ga0210399_10399014	Not Available	1147	Open in IMG/M
3300020581\|Ga0210399_10539209	Not Available	968	Open in IMG/M
3300020581\|Ga0210399_10777472	Not Available	783	Open in IMG/M
3300020581\|Ga0210399_10919226	Not Available	709	Open in IMG/M
3300020582\|Ga0210395_10000009	All Organisms → cellular organisms → Bacteria	307570	Open in IMG/M
3300020582\|Ga0210395_10002299	All Organisms → cellular organisms → Bacteria	14873	Open in IMG/M
3300020582\|Ga0210395_10231635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1387	Open in IMG/M
3300020582\|Ga0210395_10401195	Not Available	1031	Open in IMG/M
3300020582\|Ga0210395_10529381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300020583\|Ga0210401_10058762	All Organisms → cellular organisms → Bacteria	3623	Open in IMG/M
3300020583\|Ga0210401_10107128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2625	Open in IMG/M
3300020583\|Ga0210401_10156757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2126	Open in IMG/M
3300020583\|Ga0210401_10254087	Not Available	1617	Open in IMG/M
3300020583\|Ga0210401_10531701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300020583\|Ga0210401_10720041	Not Available	858	Open in IMG/M
3300020583\|Ga0210401_10864040	Not Available	764	Open in IMG/M
3300021168\|Ga0210406_10007251	All Organisms → cellular organisms → Bacteria	11308	Open in IMG/M
3300021168\|Ga0210406_10016763	All Organisms → cellular organisms → Bacteria → Acidobacteria	6933	Open in IMG/M
3300021168\|Ga0210406_10731913	Not Available	759	Open in IMG/M
3300021170\|Ga0210400_10002143	All Organisms → cellular organisms → Bacteria	18711	Open in IMG/M
3300021170\|Ga0210400_10037326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3768	Open in IMG/M
3300021170\|Ga0210400_10060489	Not Available	2953	Open in IMG/M
3300021170\|Ga0210400_10060489	Not Available	2953	Open in IMG/M
3300021170\|Ga0210400_10483961	Not Available	1021	Open in IMG/M
3300021170\|Ga0210400_10670715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300021170\|Ga0210400_10701665	Not Available	832	Open in IMG/M
3300021171\|Ga0210405_10274321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1334	Open in IMG/M
3300021171\|Ga0210405_10680301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300021171\|Ga0210405_10804737	Not Available	720	Open in IMG/M
3300021171\|Ga0210405_11238632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300021178\|Ga0210408_10297473	Not Available	1287	Open in IMG/M
3300021180\|Ga0210396_10002932	All Organisms → cellular organisms → Bacteria	17149	Open in IMG/M
3300021180\|Ga0210396_11020982	Not Available	700	Open in IMG/M
3300021181\|Ga0210388_10000271	All Organisms → cellular organisms → Bacteria	45040	Open in IMG/M
3300021181\|Ga0210388_10924011	Not Available	751	Open in IMG/M
3300021403\|Ga0210397_11547621	Not Available	515	Open in IMG/M
3300021404\|Ga0210389_10000110	All Organisms → cellular organisms → Bacteria	81928	Open in IMG/M
3300021405\|Ga0210387_10058278	All Organisms → cellular organisms → Bacteria	3128	Open in IMG/M
3300021405\|Ga0210387_10807561	Not Available	829	Open in IMG/M
3300021407\|Ga0210383_10262194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1484	Open in IMG/M
3300021407\|Ga0210383_10360031	Not Available	1254	Open in IMG/M
3300021432\|Ga0210384_10000425	All Organisms → cellular organisms → Bacteria	64752	Open in IMG/M
3300021474\|Ga0210390_10197394	All Organisms → cellular organisms → Bacteria → Acidobacteria	1702	Open in IMG/M
3300021477\|Ga0210398_10028460	All Organisms → cellular organisms → Bacteria	4694	Open in IMG/M
3300021478\|Ga0210402_10120991	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2366	Open in IMG/M
3300021478\|Ga0210402_11503534	Not Available	601	Open in IMG/M
3300021559\|Ga0210409_10300224	All Organisms → cellular organisms → Bacteria → Acidobacteria	1448	Open in IMG/M
3300022532\|Ga0242655_10324088	Not Available	507	Open in IMG/M
3300022533\|Ga0242662_10161457	Not Available	684	Open in IMG/M
3300022711\|Ga0242674_1054077	Not Available	559	Open in IMG/M
3300022713\|Ga0242677_1025001	Not Available	765	Open in IMG/M
3300022714\|Ga0242671_1020098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300022714\|Ga0242671_1097901	Not Available	555	Open in IMG/M
3300022716\|Ga0242673_1080306	Not Available	600	Open in IMG/M
3300022717\|Ga0242661_1081099	Not Available	654	Open in IMG/M
3300024179\|Ga0247695_1022166	Not Available	894	Open in IMG/M
3300024222\|Ga0247691_1003870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2675	Open in IMG/M
3300026490\|Ga0257153_1032458	All Organisms → cellular organisms → Bacteria → Acidobacteria	1077	Open in IMG/M
3300027562\|Ga0209735_1010958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1755	Open in IMG/M
3300027575\|Ga0209525_1136501	Not Available	567	Open in IMG/M
3300027645\|Ga0209117_1002131	All Organisms → cellular organisms → Bacteria → Proteobacteria	6887	Open in IMG/M
3300027660\|Ga0209736_1011531	All Organisms → cellular organisms → Bacteria	2824	Open in IMG/M
3300027674\|Ga0209118_1000202	All Organisms → cellular organisms → Bacteria → Acidobacteria	38632	Open in IMG/M
3300027835\|Ga0209515_10209949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1154	Open in IMG/M
3300027842\|Ga0209580_10090005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1475	Open in IMG/M
3300027853\|Ga0209274_10263426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883	Open in IMG/M
3300027879\|Ga0209169_10199180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300027882\|Ga0209590_10998613	Not Available	522	Open in IMG/M
3300027889\|Ga0209380_10238130	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300027908\|Ga0209006_10017838	All Organisms → cellular organisms → Bacteria	6440	Open in IMG/M
3300031446\|Ga0170820_10648484	Not Available	589	Open in IMG/M
3300031474\|Ga0170818_105258624	Not Available	528	Open in IMG/M
3300031708\|Ga0310686_108842749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1842	Open in IMG/M
3300031708\|Ga0310686_115179195	All Organisms → cellular organisms → Bacteria	3842	Open in IMG/M
3300031715\|Ga0307476_11134683	Not Available	573	Open in IMG/M
3300031720\|Ga0307469_10010506	All Organisms → cellular organisms → Bacteria	4505	Open in IMG/M
3300032174\|Ga0307470_10464519	Not Available	914	Open in IMG/M
3300032180\|Ga0307471_100141701	All Organisms → cellular organisms → Bacteria	2292	Open in IMG/M
3300032180\|Ga0307471_101106911	Not Available	958	Open in IMG/M
3300032515\|Ga0348332_10777541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.65%
Aquatic	Environmental → Aquatic	6.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.86%
Freshwater	Environmental → Aquatic → Freshwater	4.76%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.59%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.63%
Loam	Environmental → Terrestrial → Soil → Loam	20.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.97%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.59%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.97%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.59%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.79%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	57.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.38%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.59%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.59%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001089	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3	Environmental	Open in IMG/M
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1017387796	3300000364	Soil	MSSSSFAHVLLFACPKCGIPFASACASTEKNLEAADGRYFDPYCPCGWTGKVAGEEALQHWVEPWKIPVNLGSDAQVLAMKT*
JGI12683J13190_10264931	3300001089	Forest Soil	SFSHVLLFACPQCGSPLASACASKDKNLEVADAHWFNPHCHCGWSGPVIGVQAVKHWVEPWSIPIKVGPDAAGSCDSEPPNCA*
JGI12636J13339_10017942	3300001154	Forest Soil	MQTVTDSFSHVLLFACPQCGSPLASACASTKKNLEGADAHWFNPHCHCGWTGPVIGVQAVKHWVEPWKTPVKIGPDAPGSCDGEPLT*
JGI12712J15308_100964732	3300001471	Forest Soil	MHTATDSYAHVLLFACPQCGTPLAAACASTQRNLEVADAHWFSPRCHCGWTGEVIGVQAVKHWVEPWKRPVNVGPDVPSSCDGEPLAST*
JGI12635J15846_100000318	3300001593	Forest Soil	METVSGCFAHVLLFACPKCGIPLASACASTERNLETADAHWFNPHCPCGWTGSVTGLHATKHWVEEWRIPVNLGPDAAGTCDSESRS*
JGI12635J15846_1000087622	3300001593	Forest Soil	MQTVKDSYAHVLLFACPQCGTPLASACASTRKNLEVADAHWFNPRCQCGWTEKVIGVQAMKHWVEPWKTPVNVGPDVASSCDGEPLRNT*
JGI12635J15846_100042842	3300001593	Forest Soil	MQTVSESFSHVLLFACPQCGSPLASACASKDKNLEVADAHWFNPXCHCGWSGPVIGVQAVKHWVEXWSIPXKVGPDAAGSCDSEPPNCA*
JGI12635J15846_100403213	3300001593	Forest Soil	METVTESFAHVLLFACPRCGIPLASACASTERNLEIADGHWFNPHCPCGWTGPVIGALALMHWVEPWKIPVNLGPDILGSCDAKNASQN*
Ga0062385_104734713	3300004080	Bog Forest Soil	METVTSSFAHVLLFACPKCGIPLASACATAEKNLEAADAHWFNPHCPCGWTGSVIGLEASKHWVEPWKIPVNLGPDAAGSCDSESAN*
Ga0062384_1001103061	3300004082	Bog Forest Soil	MQTVTESYAHVLLFACPKCGTPLASACASTHKNLEVADAHWFNPRCHCGWAGEVIGVQAVRHWVEPWKTPVKVGPDVASSCDGQPLVNT*
Ga0062389_1011290861	3300004092	Bog Forest Soil	QLVAESLAHVLLFACPQCGNPLASACASLEKNLEVADAHWFNPHCHCGWTGPVIGVQAVKHWIEPWNVPVEVGPDAAGSCSSQPFIE*
Ga0062386_1002256683	3300004152	Bog Forest Soil	METVTSSFAHVLLFACPKCGIPLASACATTEKNQEAADAHWFNPHCPCGWTGSVIGLEASKHWVEPWKIPVNLGPDAAGSCDSESAN
Ga0062388_1020837961	3300004635	Bog Forest Soil	LAHVLLFACPQCGNPLASACASLEKNLEVADAHWFNPHCHCGWTGPVIGVQAVKHWIEPWNVPVEVGPDAAGSCSSQPFIE*
Ga0070710_105512792	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	METVSGCFAHVLLFACPQCGIPLASACAGVERNLESADAHWFDPHCPCGWTGSVIGLQAVKHWVEEWRVPVKLRSDGAGSCEGGQPASV*
Ga0070735_100572121	3300005534	Surface Soil	MQTETHSFAHVLLFACPQCGTPLASACASERKNLEVADAHWFNPHCPCGWTGPVIGVQAVKHWIENWTIPVNKGSGAGSSCDGEPLRGI*
Ga0070761_100102552	3300005591	Soil	MQIVTESYAHVLLFACPKCATPLASACASTHKNLEVADAHWFNPRCHCGWAGEVIGVQAVRHWVEPWKTPVQVGPDVASSCDGKPLVNT*
Ga0070761_102405722	3300005591	Soil	MKLVEESFAHVLLFACPQCGNPLASACASLERNLEVADAHWFNPHCHCGWTGPVIGVQAVKHWIEPWKVPVNVGPEAAGSCDSQPLIE*
Ga0070762_105178623	3300005602	Soil	MQTVTHSYAHVLLFACPQCGTPLAAACASTQKNLEVADAHWFSPRCHCGWTGDVIGVQAVRHWVEPWKTPVSVGPDVPSSCDGEPLVNT*
Ga0070764_101754382	3300005712	Soil	MPLAKESFAHVLLFACPQCGNPLASACASLERNLEVADTHWFDPHCHCGWTGPVIGVEAVKHWIEPWKVPLNVGPDAAGSCSSQPIIE*
Ga0070766_106917712	3300005921	Soil	LYLSNFFQFQEDFMKLVEESFAHVLLFACPQCGNPLASACASLERNLEVADAHWFNPHCHCGWTGPVIGVQAVKHWIEHWKVPVNVGPEAAGSCNSQPLIE*
Ga0070765_1000240433	3300006176	Soil	MQTVSESYAHIFLFACPQCGSPLASACASANRNLEQADAHWFDPHCHCGWSGPVIGLQAVKHWVEPWNIPVKVGPDAAGTCDDERPTKA*
Ga0070765_1011806791	3300006176	Soil	MQNVSEKFAHVLLFACPKCGIPLASACASTEKNLEVADGHWFNPHCPCGWTGPVLGGVAIKHWTELWPFPVKLDPDTLGSCETKH*
Ga0070765_1022799361	3300006176	Soil	MQNVTHSYAHVLLFACPQCGSPLASACASTKKNLEVADAHWFNPHCPCGWTGPVIGVQAAKHWIEDWTIPVSSGPGAGSSCDGEPLHNTN*
Ga0073928_100076505	3300006893	Iron-Sulfur Acid Spring	METVTSGFAHVLLFACPKCGLPLAAACASREKNLELADAHWFHPHCPCGWTGSVVGIEAAKHWVETWKIPVNLGPDAEGSCDSNPLTQV*
Ga0073928_106246922	3300006893	Iron-Sulfur Acid Spring	METVTESFAHVLLFACPRCGIPLASACASTERNLEIADGHWFNPHCPCGWTGPVIGALALMHWVEPWKIPVNLGPDILGSCDGKNASQN*
Ga0099827_118788581	3300009090	Vadose Zone Soil	METVTSSFAHVLLFACPKCGIPLASACASTEKNLEAADAHYFDPHCPCGWTGKVAGVEALQHWVEPWKIPVNLGPDAASSCNGDKT*
Ga0074044_1000015711	3300010343	Bog Forest Soil	MQLVNESFAHVLLFACPQCGNPLASACASLEKNLEVADAHWFNPHCPCGWTGPVIGVQALKHWIELWKVPVKVGPDAAGSCSSQPFIE*
Ga0074044_105691051	3300010343	Bog Forest Soil	ESFAHVLLFACPQCGNPLASACASLEKNLEVADAHWFNPHCHCGWVGPVIGVQALKHWIEPWKVPVNVGPDAEGSCSSQAFIE*
Ga0150983_154851882	3300011120	Forest Soil	MEAVTSSIAHVLLFACPKCGVPLASACASAERNLEVADAHWFNPHCSCGWTGSVSGIEAVQHYIHDWKIPVNLEPGATGSRDSEPLIK*
Ga0137363_101495121	3300012202	Vadose Zone Soil	VPNIAEQSAHVLLFACPNCRRPLASACASEAKNLEVADGHWFNPHCHCGWTGDVIGLEAVKHWVEPWNIPITEDASGSCDAELTR*
Ga0193755_10351113	3300020004	Soil	MEAVTSSFAHVLLFACPKCGIPLASACASTEKNLEAADARYFDPYCPCGWTGKVAGVEALQHWVEPWKIPVNLGSDIAGSSNGDMS
Ga0210407_100898662	3300020579	Soil	METVSRCFAHVLLFACPNCGIPLASACASAERNLETADVHWFNPHCPCGWTGSVIGIQAIKHWVEDWRVPIKLGADGAGSCEGGAAR
Ga0210407_103220481	3300020579	Soil	MQTVTESYAHVLLFACPQCGTPLASACASTHKNLEVADAHWFNPRCPCGWAGEVIGVQAVRHWVEPWKTPVNVGPDVASSCDGKPLVDT
Ga0210403_100005524	3300020580	Soil	METVPSSFAHVLLFACPKCGVPLAAACASTDKNLEAADAHWFNPHCPCGWTGSVIGVEATKHWVEAWNIPVSLGPNAEGSCDREPSN
Ga0210403_100191437	3300020580	Soil	METVSSSFAHVLLFACPKCGIPLASACASTERNLETADAHWFDPHCPCGWTGSVTGLQATKHWVEEWRIPLNLGPDAEGSCDSDPPN
Ga0210403_100258672	3300020580	Soil	MPPVTESFAHVLLFACPRCGSPLASACATTRRNLEVADAHWFNPHCHCGWSGSVIGVHALKHWVEPWKIPVNVGPDELGSCDSESLTE
Ga0210403_100393033	3300020580	Soil	METVSSGFAHVLLFACPKCGIPLASACASTERNLEAADVHWFNPHCPCGWTGSVIGLQAIKHWVEEWRIPVHLGPDATGSCDTGSSS
Ga0210403_100957562	3300020580	Soil	MEAVTSSIAHVLLFACPKCGVPLASACASAERNLEVADAHWFNPHCSCGWTGSVSGIEAVQHYIHDWKIPVNLEPGATGSRDSEPLIK
Ga0210403_102550772	3300020580	Soil	METVTSSFAHVLLFACPKCGIPLASACASKGKNLEAADARYFDPHCHCGWTGSVIGVEAIKRWVEPWNIPFDLEAGAAGSCES
Ga0210403_108064271	3300020580	Soil	MQKVTESYSHVLLFACPQCGNPLASACASTNKNLEVADAHWFNPHCHCGWTGSVIGVQAVKHWIEPWKTPINLRSEAAGSCDSDPLLK
Ga0210403_109023401	3300020580	Soil	MQTVTDSYAHVLLFACPRCGTPLASACASTQKNLEVADAHWFNPRCHCGWTDPVIGVQAVKHWVELWKTPVDVGPDVASSCDGEPLVNT
Ga0210399_100017889	3300020581	Soil	METVSSGFAHVLLFACPKCGIPLASACASTERNLEAADVHWFNPHCPCGWTGAVIGLQAKKHWVEEWRIPVNLGPDGTGLCDSKSSD
Ga0210399_100117146	3300020581	Soil	MEAVSSCFAHVLLFACPKCGVPLASACASTERNLETADAHWFNPHCPCGWTGSVIGLQATKHWVEEWRTPVNLRSDAAGSCDRKSRS
Ga0210399_100693102	3300020581	Soil	METVTDSYAHILLFACPKCGNPLASACASTWKNLEIADAHYFNPHCPCGWTGPVIGVEAVKHWVEVWKIPVILKSDATGSCDRK
Ga0210399_100757793	3300020581	Soil	METVPSSFAHVLLFACPKCGVPLAAACASTDKNLEAADAHWFNPHCPCGWTGSVIGVEATKHWVEAWNIPVSLDPNAEGSCDSEPSN
Ga0210399_100866952	3300020581	Soil	METASSCFAHVLLFACPKCGIPLASACASRERNLETADAHWFNTHCPCGWTGSVTGLHATKHWVEEWRIPVNLGPDAAGTCDSESRS
Ga0210399_103990142	3300020581	Soil	MQTVTDSYAHVLLFACPQCGTPLASACASMQKNLEVADAHWFNPRCHCGWTDQVIGVQAVKHWVEPWRTPVDVGPNVASSCDGGPLVNS
Ga0210399_105392091	3300020581	Soil	METVSDCFAHILLFACPQCGIPLASACAGAERNLESADAHWFDPHCPCGWTGSVIGLQAVKHWVEEWRVPVKLRADGAGSCEGGAAR
Ga0210399_107774721	3300020581	Soil	METVSRCFAHVLLFACPNCGIPLASACASAERNLETADVHWFNPHCPCGWTGSVIGIQAIKHWVEDWRVP
Ga0210399_109192261	3300020581	Soil	TVTSSFAHVLLFACPKCGIPLASACASKGKNLEAADARYFDPHCHCGWTGSVIGVEAIKRWVEPWNIPFDLEAGAAGSCES
Ga0210395_1000000954	3300020582	Soil	MQLVKESFAHVLLFACPQCGNPLASACASLERNLEVADAHWFNPHCHCGWTGPVIGVQAVKHWIEHWKVPVNIGPEAAGSCNSQPLIE
Ga0210395_1000229917	3300020582	Soil	MQIVTESYAHVLLFACPKCATPLASACASTHKNLEVADAHWFNPRCHCGWAGEVIGVQAVRHWVEPWKTPVQVGPDVASSCDGKPLVNT
Ga0210395_102316351	3300020582	Soil	MQNENLNDKFAHVLLFACPKCGIPLASACASTERNLEVADGHWFNPHCPCGWTGPVLGGVAIKHWTERWPFPVKVDPDTLGSCETKR
Ga0210395_104011952	3300020582	Soil	MEAVTSSIAHVLLFACPKCGVPLASACASAERNLEVADAHWFNLHCSCGWTGSVSGIEAVQHYIHDWKIPVNLEPGATGSRDSEPLIK
Ga0210395_105293812	3300020582	Soil	MKLVEESFAHVLLFACPQCGNPLASACASLERNLEVADAHWFNPHCHCGWTGPVIGVQAVKHWIEPWKVPVNVGPEAAGSCDSQPLIE
Ga0210401_100587622	3300020583	Soil	METVTDSYAHVLLFACPQCGIPLASACASTEKNLEMADAHYFNPHCQCGWTVSVSGFHALKHWVERWKIPVLAC
Ga0210401_101071281	3300020583	Soil	MQTVTDSYAHVLLFACPRCGTPLASACASTQKNLEVADAHWFNPRCHCGWTDQVIGVQAVKHWVEPWKTPVDVGPDVASSCDGEPLVNT
Ga0210401_101567572	3300020583	Soil	METVPSSFAHVLLFACPRCGVPLAAACASTDKNLEAADAHWFNPHCPCGWTGSVVGVEATKHWVEAWNIPVSLGPDAAGSCDSEPSN
Ga0210401_102540872	3300020583	Soil	METATESFAHVLLFACQRCGTPLASACVSTERNLEIADGHWFNPHCPCGWTGPVIGALALMHWVEPWKTPVHLEPDALGSCNGKEKHTSG
Ga0210401_105317012	3300020583	Soil	METATESFAHVLLFACQRCGIPIASACVRTERNLEIADGHWFNPHCPCGWTGTVLGALALMHWLEPWKTPVDLEPDAPGALA
Ga0210401_107200411	3300020583	Soil	MQTVTDSYAHVLLFACPQCGTPLASACASKQKNLEVADAHWFNPRCHCGWTGQVIGVEAVRHWVEPWKTPVDVGPDVASSCDGEPLVNT
Ga0210401_108640401	3300020583	Soil	METVTDSYAHVLLFACPKCGIPLASACASTWKNLEIADAHYFNAHCPCGWTGPVIGVEAVKHWVEVWKIPVNLRPDAAGPCDKS
Ga0210406_1000725115	3300021168	Soil	METVSGCFAHVLLFACPQCGIPLASACAGVERNLESADAHWFDPHCPCGWTGSVIGLQAVKHWVEEWRVPVKLRSDGAGSCEGGRPASV
Ga0210406_100167631	3300021168	Soil	MQTVTDSYAHVLLFACPQCGTPLASACASMQKNLEVADAHWFNPRCHCGWTDQVIGVQAVKHWVEPWRTPVDVGPNVASSCDGGPLVNT
Ga0210406_107319131	3300021168	Soil	MQTVTDSYAHVLLFACPRCGTPLASACASTQKNLEVADAHWFNPRCHCGWTDQVIGVQAVKHWVEPWKTPV
Ga0210400_1000214318	3300021170	Soil	METVSRCFAHVLLFACPNCGIPLASACASAERNLETADVHWFNPHCPCGWTGSVIGIQAIRHWVEDWRVPIKLGADGAGSCEGGAAR
Ga0210400_100373261	3300021170	Soil	METVSSGFAHVLLFACPKCGIPLASACASTERNLEAADVHWFNPHCPCGWTGSVIGLQAVKHWVEEWRIPVHLGPDATGSCDTGSSS
Ga0210400_100604895	3300021170	Soil	METVTDSYAHVLLFACPKCGNPLASACASTWKNLEIADAHYFNPHCPCGWTGPVIGVEAVKHWVEVWKIPINSMPHAAGSCDKN
Ga0210400_100604897	3300021170	Soil	METVTDSYAHALLFACPQCGIPLASACASTEKNLEMADAHYFNPHCQCGWTVSVSGFHALKHWVERWKIPVNIRRDAAGSAETGLLIC
Ga0210400_104839612	3300021170	Soil	MKTVSSSFAHVLLFACPNCGIPLASACASTERNLEAADVHWFNPHCPCGWTGSVIGLEAKKHWVEEWRIPVNPGPDGTGSCDSKSSG
Ga0210400_106707152	3300021170	Soil	METVPTSFAHVLLFACPRCGVPLAAACASTDKNLEAADAHWFNPHCPCGWTGSVVGVEATKHWVEAWNIPVSLGPDAAGSCDSEPSN
Ga0210400_107016651	3300021170	Soil	MQTVTDSYAHVLLFACPQCGTPLASACASMQKNLEVADAHWFNPRCHCGWTDQVIGVQAVKHWVEPWKTPVDVGPNVASSCDGGPLVNT
Ga0210405_102743212	3300021171	Soil	MQTVTESYAHVLLFACPQCGTPLASACASTHKNLEVADAHWFNPRCHCGWAGEVIGVQAVRHWVEPWKAPVNVGPDVASSCDGKPLVNT
Ga0210405_106803011	3300021171	Soil	METLPSSFAHVLLFACPKCGVPLAAACASTDKNLEAADAHWFNPHCPCGWTGSVIGVEATKHWVEAWNIPVSLDPNAEGSCDSEPSN
Ga0210405_108047371	3300021171	Soil	MEAVKSSFAHVLLFACPKCGVPLASACASAEKNLEVADAHWFNPRCSCGWTGSVVGIEAVQHWIHDWKIPINLEPGAAGSCESEPLIK
Ga0210405_112386322	3300021171	Soil	YLSSFFQFQEDFMQLVKESFAHVLLFACPQCGNPLASACASLERNLEVADAHWFNPHCHCGWTGPVIGVQAVKHWIEHWKVPVNIGPEAAGSCNSQPLIE
Ga0210408_102974732	3300021178	Soil	MQTVTDSYAHVLLFACPQCGTPLASACASTQKNLEVADAHWFNPRCHCGWTDQVIGVQAVKHWVEPWRTPVDVGPNVASSCDGGPLVNT
Ga0210396_100029329	3300021180	Soil	MQTVSESFSHVLLFACPQCGSPLASACASKDKNLEVADAHWFNPHCHCGWIGPVIGVQAVKHWVEPWNIPVKVGPDAAGTCDDERPTKA
Ga0210396_110209822	3300021180	Soil	MKTVSSSFAHVLLFACPNCGIPLASACASTERNLEAADVHWFNPHCPCGWTGSVIGLEAKKHWVEEWRIPVNPGPDGTGSCDSKSSGSGLSH
Ga0210388_100002714	3300021181	Soil	MQDVNDKFAHVLLFACPKCGIPLASACASTEKNLEVADGHWFNPHCPCGWTGPVLGGVAIKHWTERWPFPVKVDPDTLGSCETKH
Ga0210388_109240112	3300021181	Soil	MQTVTDSYAHVLLFGCPQCGTPLAAACASKQKNLEVADAHWFSPRCHCGWTGEVIGVQAVKHWVEPWKTPVNVGSDVPSSCNGEPLVNS
Ga0210397_115476212	3300021403	Soil	MQDVNDKFAHVLLFACPKCGIPLASACASTEKNLEVADGHWFNPHCPCGWTGPVLGGVAIKHWTERWPFPVKV
Ga0210389_1000011020	3300021404	Soil	METASSCFAHVLLFACPKCGIPLASACASRERNLETADAHWFNPHCPCGWTGSVTGLHATKHWVEEWRIPVNLGPDAAGTCDSESRS
Ga0210387_100582781	3300021405	Soil	METASSCFAHVLLFACPKCGIPLASACASRERNLETADAHWFNPHCPCGWTGSVTGLHATKHWVEEWRIPVNLGPDAAGSCDSESRS
Ga0210387_108075612	3300021405	Soil	MQTVTDSYAHVLLFACPQCGTPLAAACAGTQKNLEVADAHWFSPRCHCGWTGDVIGVQAVKHWVEPWKTPVNVGPDVPSSCDGEPLVNT
Ga0210383_102621942	3300021407	Soil	MQNVDEKFAHVLLFACPKCGIPLASACASTERNLEVADGHWFNPHCPCGWTGPVLGGVAIKHWTERWPFPVKVDPDTLGSCETKR
Ga0210383_103600312	3300021407	Soil	MQTVTDSYAHVLLFGCPQCGTPLAAACASKQKNLEVADAHWFSPRCHCGWTGEVIGVQAVKHWVEPWKTPVNVGSDVASSCNGEPLVNS
Ga0210384_1000042514	3300021432	Soil	MQTVTDSYAHVLLFACPRCGTPLASACASTQKNLEVADAHWFNPRCHCGWTDQVIGVQAVKHWVEPWKTPADVGPDVASSCDGEPLVNT
Ga0210390_101973942	3300021474	Soil	METVSSSFAHVLLFACPKCGIPLASACASKERNLETADAHWFNPHCPCGWTGSVTGLHARKHWVEEWRIPVNLGPDAAGTCDSESRS
Ga0210398_100284603	3300021477	Soil	METVSSSFAHVLLFACPKCGIPLASACASKERNLETADAHWFNPHCPCGWTGSVTGLHARKHWVEEWRIPVNLGPGEEGSCDSDPPK
Ga0210402_101209912	3300021478	Soil	METVTSSFAHVLLFACPKCGIPLATACASLEKNLEVADSHWYDPHCPCGWNGSVIGVEAVKHWVEQWNIPVNLGPDATGSCESQPSNRH
Ga0210402_115035341	3300021478	Soil	METVPSSFAHVLLFACPKCGVPLAAACASTDKNLEAADAHWFNPHCPCGWTGSVIGVEATKHWVEAWNIPVSLGPDAAGSCDSEPSN
Ga0210409_103002241	3300021559	Soil	METVSGCFAHVLLFACPQCGIPLASACASAERNLETADAHWFNPHCPCGWTGSVIGLQALKHWVEEWRVPVKLRPDGAGSCDGGASR
Ga0242655_103240881	3300022532	Soil	METVSRCFAHVLLFACPNCGIPLASACASAERNLETADVHWFNPHCPCGWTGSVIGIQAIKHWVEDWRVPIKLGADGAGSCEGG
Ga0242662_101614571	3300022533	Soil	MEAVTSSIAHVLLFACPKCGVPLASACASDERNLEVADAHWFNPHCSCGWTGSVSGIEAVQHYIHDWKIPVNLEPGATGSRDSEPLIK
Ga0242674_10540771	3300022711	Soil	MQTVNESYAHVLLFACPKCATPLASACASTHKNLEVADAHWFNPRCHCGWAGEVIGVQAVRHWVEPWKTPVQVGPDVASSCDGKPLVNT
Ga0242677_10250011	3300022713	Soil	MQTVTDSYAHVLLFACPQCGTPLAAACAGTQKNLEVADAHWFSPRCHCGWTGEVIGVQAVKHWVEPWKTPVNVGPDVPSSCDGEPLVKT
Ga0242671_10200981	3300022714	Soil	LYLSSFFQFQEDFMQLVKESFAHVLLFACPQCGNPLASACASLERNLEVADAHWFNPHCHCGWTGPVIGVQAVKHWIEHWKVPVNIGPEAAGSCNSQPLIE
Ga0242671_10979011	3300022714	Soil	MQTVTDSYAHVLLFGCPQCGTPLAAACASNQKNLEVADAHWFSPRCHCGWTGEVIGVQAVKHWVEPWKTPVNVGSDVPSSCNGEPLVNS
Ga0242673_10803061	3300022716	Soil	MQTVTDSYAHVLLFGCPQCGTPLAAACASNQKNLEVADAHWFSPRCHCGWTGEVIGVQAVKHWVEPWKTPVNVGSDVASSCNGEPLVNS
Ga0242661_10810991	3300022717	Soil	FACPKCGVPLASACASAERNLEVADAHWFNPHCSCGWTGSVSGIEAVQHYIHDWKIPVNLEPGATGSRDSEPLIK
Ga0247695_10221661	3300024179	Soil	METVSGCFAHILLFACPQCGIPLASACAGAERNLESADAHWFDPHCPCGWTGSVIGLQAVKHWVEEWRVPVKLRADGAGSCEGGAAR
Ga0247691_10038701	3300024222	Soil	MPPVTESFAHVLLFACPKCGNPLASACATTRRNLEVADAHWFNPHCPCGWSGSVIGVHALKHWVEPWKIPVNVGPGELGSCDNESLNE
Ga0257153_10324581	3300026490	Soil	METVSSGFAHVLLFACPKCGIPLASACASTERNLEAADVHWFNPHCPCGWTGSVIGLQAIKHWVEEWRIPVNL
Ga0209735_10109582	3300027562	Forest Soil	MQTVKDSYAHVLLFACPQCGTPLASACASTRKNLEVADAHWFNPRCQCGWTEKVIGVQAMKHWVEPWKTPVNVGPDVASSCDGEPLRNT
Ga0209525_11365011	3300027575	Forest Soil	MQTASSCFAHVLLFACPKCGIPLASACASAERNLETADAHWFNPHCPCGWTGSVTGLHATKHWVEEWRIPVNLGPDVAGSCDSKPPS
Ga0209117_10021318	3300027645	Forest Soil	MQTVSESFSHVLLFACPQCGSPLASACASKDKNLEVADAHWFNPYCHCGWSGPVIGVQAVKHWVELWSIPVKVGPDAAGSCDSEPPNCP
Ga0209736_10115312	3300027660	Forest Soil	METVSGCFAHVLLFACPKCGIPLASACASTERNLETADAHWFNPHCPCGWTGSVTGLHATKHWVEEWRIPVNLGPDAAGTCDSESRS
Ga0209118_100020223	3300027674	Forest Soil	MQTVTDSFSHVLLFACPQCGSPLASACASTKKNLEGADAHWFNPHCHCGWTGPVIGVQAVKHWVEPWKTPVKIGPDAPGSCDGEPLT
Ga0209515_102099494	3300027835	Groundwater	MQTVTDSFSHVLLFACPQCGSPLASACASTEKNLEVADAHWFNPHCHCGWTGPVIGVQAVKHWVEPWKTPVNIGPEAPGSCDGEP
Ga0209580_100900053	3300027842	Surface Soil	MQTETHSFAHVLLFACPQCGTPLASACASERKNLEVADAHWFNPHCPCGWTGPVIGVQAVKHWIENWTIPVNKGSGAGSSCDGEPLRGI
Ga0209274_102634261	3300027853	Soil	FFQFQEDFMKLVEESFAHVLLFACPQCGNPLASACASLERNLEVADAHWFNPHCHCGWTGPVIGVQAVKHWIEPWKVPVNVGPEAAGSCDSQPLIE
Ga0209169_101991802	3300027879	Soil	MPLAKESFAHVLLFACPQCGNPLASACASLERNLEVADTHWFDPHCHCGWTGPVIGVEAVKHWIEPWKVPLNVGPDAAGSCSSQPIIE
Ga0209590_109986131	3300027882	Vadose Zone Soil	METVTSSFAHVLLFACPKCGIPLASACASTENNLEAADAHYFDPHCPCGWTGKVAGVEALQHWVEPWKIPVNLGPDAASSCNGDKT
Ga0209380_102381301	3300027889	Soil	MQTVTHSYAHVLLFACPQCGTPLAAACASTQKNLEVADAHWFSPRCHCGWTGDVIGVQAVRHWVEPWKTPVSVGPDVPSSCDGEPLVNT
Ga0209006_100178384	3300027908	Forest Soil	MHTATDSYAHVLLFACPQCGTPLAAACASTQRNLEVADAHWFSPRCHCGWTGEVIGVQAVKHWVEPWKRPVNVGPDVPSSCDGEPLAST
Ga0170820_106484841	3300031446	Forest Soil	MPTVTESFSHVLLFACPDCGNPLASACASLNKNLEMADAHWFNPHCHCGWTGPVIGLQALKHWVEPWKIPVDVGPGTAGSCATDPCA
Ga0170818_1052586241	3300031474	Forest Soil	LNYISTLTDSFSHLLLFACPDCGNPLASACTSMNKNLEVADAHWFNPHCHCGWTGPVIGLQALKHWVEPWKIPVDVGPGTAGSCATDPCA
Ga0310686_1088427493	3300031708	Soil	MPLVKESFAHVLLFACPQCGNPLASACASMERNLEVADAHWFNPHCHCGWTGPVIGVQALKHWIELWRVPVRVGPEAAGSCNSQPLIE
Ga0310686_1151791952	3300031708	Soil	MQTGTDTFFHVLLFACPECGSPVACACASTEQNLEVADAQWFNPVCDCGWTRPMIGAQARKHWIEPWKIPVNLVPEDGDHSAWLRTNWLNYCRP
Ga0307476_111346831	3300031715	Hardwood Forest Soil	MQTVTESYAHVLLFACPQCGTPLASACASTHKNLEVADAHWFNPRCHCGWAGEVIGVQAVRHWVEPWKTPVNVGPDVASSCDGKPLVNT
Ga0307469_100105062	3300031720	Hardwood Forest Soil	METVSSSFAHVLLFACPKCGTPLASACASTERNLETADAHWFNPHCPCGWMGSVIGIQATKHWVEEWRLPIKLEPDAAGSCDGGSPR
Ga0307470_104645191	3300032174	Hardwood Forest Soil	METVSGCFAHVLLFACPNCGIPLASACASAERNLETADVHWFNPHCPCGWTGSVIGIQAIKHWVEDWRVPVKLGADGAGSCEGGAAR
Ga0307471_1001417015	3300032180	Hardwood Forest Soil	METVSRCFAHVLLFACPNCGIPLASACASAERNLETADVHWFNPHCPCGWTGSVIGIQAIKHWVEDWRVPVKLGADGAGSCEGGAAR
Ga0307471_1011069112	3300032180	Hardwood Forest Soil	METVSGCFAHVLLFACPQCGIPLASACAGVERNLESADAHWFDPHCPCGWTGSVIGLQAVKHWVEEWRVPVKLRSDGAGSCEGGQPASA
Ga0348332_107775412	3300032515	Plant Litter	RIQLFQFEEGFMPLVKDSFAHVLLFACPQCENPLASACASLERNLKVADAHWFNPHCHCGWTGPVVGVQAVKHWIDPWKVPVNVGPDAAGSCNSQPFIE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066961

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences