Metagenome / Metatranscriptome Family F066985

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066985
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	105 residues
Representative Sequence	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGV
Number of Associated Samples	116
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	98.41 %
% of genes from short scaffolds (< 2000 bps)	92.06 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.413 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (36.508 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.78% β-sheet: 0.00% Coil/Unstructured: 39.22%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF08281	Sigma70_r4_2	85.71
PF13977	TetR_C_6	2.38
PF04542	Sigma70_r2	2.38
PF00106	adh_short	1.59
PF03572	Peptidase_S41	0.79
PF00291	PALP	0.79
PF13302	Acetyltransf_3	0.79
PF12681	Glyoxalase_2	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.38
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.38
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.38
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.38
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.79

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.41 %
Unclassified	root	N/A	1.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.41 %
Unclassified	root	N/A	1.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.41 %
Unclassified	root	N/A	1.59 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	96.03 %
Unclassified	root	N/A	1.59 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	95.24 %
Unclassified	root	N/A	1.59 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	86.51 %
Unclassified	root	N/A	1.59 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.79 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	42.86 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.59 %
Unclassified	root	N/A	1.59 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.79 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	42.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.59 %
Unclassified	root	N/A	1.59 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.79 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	42.86 %
Unclassified	root	N/A	1.59 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.79 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.79 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	42.86 %
Unclassified	root	N/A	1.59 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.79 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig16635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	780	Open in IMG/M
2170459005\|F1BAP7Q02JQN5T	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
2170459014\|G1P06HT01AOVPD	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	528	Open in IMG/M
2199352024\|deeps_contig39488.24975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1053	Open in IMG/M
3300004633\|Ga0066395_10824786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	558	Open in IMG/M
3300005158\|Ga0066816_1027675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	507	Open in IMG/M
3300005187\|Ga0066675_11125098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	585	Open in IMG/M
3300005338\|Ga0068868_100373595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1225	Open in IMG/M
3300005341\|Ga0070691_11037434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300005366\|Ga0070659_101421243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	617	Open in IMG/M
3300005434\|Ga0070709_11075414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642	Open in IMG/M
3300005435\|Ga0070714_100969882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	827	Open in IMG/M
3300005437\|Ga0070710_10461955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300005437\|Ga0070710_11317255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300005437\|Ga0070710_11395602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300005450\|Ga0066682_10763923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300005467\|Ga0070706_101144539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300005471\|Ga0070698_101720102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300005518\|Ga0070699_101092836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	731	Open in IMG/M
3300005530\|Ga0070679_101311886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	669	Open in IMG/M
3300005545\|Ga0070695_100280689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1224	Open in IMG/M
3300005545\|Ga0070695_100723809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792	Open in IMG/M
3300005547\|Ga0070693_100015180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3962	Open in IMG/M
3300005548\|Ga0070665_101226813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	760	Open in IMG/M
3300005719\|Ga0068861_100858122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	856	Open in IMG/M
3300005842\|Ga0068858_100917918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	856	Open in IMG/M
3300006175\|Ga0070712_100702216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300006573\|Ga0074055_11847722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1306	Open in IMG/M
3300006605\|Ga0074057_12304617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2460	Open in IMG/M
3300006755\|Ga0079222_11652159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	611	Open in IMG/M
3300006806\|Ga0079220_10555784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	802	Open in IMG/M
3300006806\|Ga0079220_11813027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300006904\|Ga0075424_100629639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1145	Open in IMG/M
3300006954\|Ga0079219_11682734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300006954\|Ga0079219_12177785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300007788\|Ga0099795_10036338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1728	Open in IMG/M
3300009093\|Ga0105240_12773440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	504	Open in IMG/M
3300009101\|Ga0105247_11089570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629	Open in IMG/M
3300009101\|Ga0105247_11592120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300009162\|Ga0075423_11832675	Not Available	655	Open in IMG/M
3300009176\|Ga0105242_10535099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1120	Open in IMG/M
3300009177\|Ga0105248_11250586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	839	Open in IMG/M
3300009545\|Ga0105237_10846020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	922	Open in IMG/M
3300009792\|Ga0126374_11089150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300010043\|Ga0126380_10009986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4216	Open in IMG/M
3300010362\|Ga0126377_10563481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1179	Open in IMG/M
3300010373\|Ga0134128_12998361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300010375\|Ga0105239_12657991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
3300010396\|Ga0134126_11716951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	689	Open in IMG/M
3300010397\|Ga0134124_10111889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2390	Open in IMG/M
3300010398\|Ga0126383_12204546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	637	Open in IMG/M
3300012209\|Ga0137379_11492477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	577	Open in IMG/M
3300012493\|Ga0157355_1004172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	909	Open in IMG/M
3300012497\|Ga0157319_1027752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593	Open in IMG/M
3300012500\|Ga0157314_1008717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	844	Open in IMG/M
3300012501\|Ga0157351_1002685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1261	Open in IMG/M
3300012918\|Ga0137396_10098691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2082	Open in IMG/M
3300012960\|Ga0164301_10019209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3018	Open in IMG/M
3300012985\|Ga0164308_11212137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	682	Open in IMG/M
3300012988\|Ga0164306_11724786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300013105\|Ga0157369_12659273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	505	Open in IMG/M
3300013296\|Ga0157374_12107767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	591	Open in IMG/M
3300014745\|Ga0157377_10666402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300014968\|Ga0157379_10152409	All Organisms → cellular organisms → Bacteria	2085	Open in IMG/M
3300014969\|Ga0157376_10689811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1025	Open in IMG/M
3300015357\|Ga0134072_10323494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	583	Open in IMG/M
3300015372\|Ga0132256_101149905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	890	Open in IMG/M
3300018433\|Ga0066667_10753433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	822	Open in IMG/M
3300020070\|Ga0206356_10819760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1551	Open in IMG/M
3300020170\|Ga0179594_10195004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	758	Open in IMG/M
3300020199\|Ga0179592_10219545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	859	Open in IMG/M
3300021344\|Ga0193719_10419155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300021402\|Ga0210385_11172525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	590	Open in IMG/M
3300021404\|Ga0210389_11497904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300021405\|Ga0210387_10863215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	798	Open in IMG/M
3300021405\|Ga0210387_11516205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	573	Open in IMG/M
3300021477\|Ga0210398_10879443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	719	Open in IMG/M
3300021559\|Ga0210409_11000269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	710	Open in IMG/M
3300021560\|Ga0126371_10433008	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1460	Open in IMG/M
3300024222\|Ga0247691_1015878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1203	Open in IMG/M
3300024245\|Ga0247677_1031541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	763	Open in IMG/M
3300024323\|Ga0247666_1057861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	780	Open in IMG/M
3300025898\|Ga0207692_10528768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	751	Open in IMG/M
3300025898\|Ga0207692_10654058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	679	Open in IMG/M
3300025903\|Ga0207680_10459380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	904	Open in IMG/M
3300025907\|Ga0207645_10232417	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1217	Open in IMG/M
3300025915\|Ga0207693_10958789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300025915\|Ga0207693_10958790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300025916\|Ga0207663_10962244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	684	Open in IMG/M
3300025917\|Ga0207660_10267263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1354	Open in IMG/M
3300025926\|Ga0207659_10028415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3801	Open in IMG/M
3300025927\|Ga0207687_11048847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	700	Open in IMG/M
3300025932\|Ga0207690_11041448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	681	Open in IMG/M
3300025938\|Ga0207704_10195934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1474	Open in IMG/M
3300025960\|Ga0207651_11863229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	541	Open in IMG/M
3300026035\|Ga0207703_10989270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	807	Open in IMG/M
3300026041\|Ga0207639_10726795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	922	Open in IMG/M
3300026075\|Ga0207708_10195676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1611	Open in IMG/M
3300026557\|Ga0179587_10107511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1696	Open in IMG/M
3300027725\|Ga0209178_1157162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	788	Open in IMG/M
3300027775\|Ga0209177_10458739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	523	Open in IMG/M
3300028379\|Ga0268266_11305201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	701	Open in IMG/M
3300028381\|Ga0268264_10779455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	954	Open in IMG/M
3300028713\|Ga0307303_10164945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	537	Open in IMG/M
3300028715\|Ga0307313_10043499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1303	Open in IMG/M
3300028718\|Ga0307307_10084281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	957	Open in IMG/M
3300028790\|Ga0307283_10154662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	635	Open in IMG/M
3300028807\|Ga0307305_10019416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3051	Open in IMG/M
3300028824\|Ga0307310_10363437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	713	Open in IMG/M
3300028828\|Ga0307312_10067698	All Organisms → cellular organisms → Bacteria	2161	Open in IMG/M
3300028872\|Ga0307314_10307691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	507	Open in IMG/M
3300031716\|Ga0310813_10448672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1119	Open in IMG/M
3300031718\|Ga0307474_11491940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	532	Open in IMG/M
3300031720\|Ga0307469_12070091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	553	Open in IMG/M
3300031740\|Ga0307468_100642967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	875	Open in IMG/M
3300031854\|Ga0310904_10949280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	610	Open in IMG/M
3300031939\|Ga0308174_11458060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300031996\|Ga0308176_11707982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	672	Open in IMG/M
3300032174\|Ga0307470_11759475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	523	Open in IMG/M
3300032180\|Ga0307471_102552816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	647	Open in IMG/M
3300032205\|Ga0307472_101362480	Not Available	686	Open in IMG/M
3300032205\|Ga0307472_101462882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	665	Open in IMG/M
3300032421\|Ga0310812_10316316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	696	Open in IMG/M
3300032898\|Ga0335072_11260188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	651	Open in IMG/M
3300032954\|Ga0335083_11554818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	500	Open in IMG/M
3300033475\|Ga0310811_10685391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	997	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.02%
Host-Associated	Host-Associated	26.19%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.02%
Plants	Host-Associated → Plants	26.19%
Solid Waste	Engineered → Solid Waste	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.14%
Grass	Engineered → Solid Waste → Grass	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.97%
Loam	Environmental → Terrestrial → Soil → Loam	17.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.59%
Composting	Engineered → Solid Waste → Grass → Composting	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.37%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.38%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.59%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005158	Soil and rhizosphere microbial communities from Laval, Canada - mgHAA	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012497	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510	Host-Associated	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00591890	2166559006	Grass Soil	MAESSGPVSGPQWRDALVSELRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPQLITRWRARILYPRWRAALIAALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLEQARQRVAFPILVPASLAGQPRSRSATADGSRR
E41_02551380	2170459005	Grass Soil	MAESSEPRRAPQWRDALVSELCALSSRLDVPPAGEQATTVRQRLEVQQHPETRPPPIARWRARILYPRWRAALVVAL
2PV_02481580	2170459014	Switchgrass, Maize And Mischanthus Litter	MAESSGPRHGPQWRDALVSELRALSPRLDVPSAAEQATTVRQRLEARQREEARPPLISRWRARILYPRWRAALIVALTVVALAVAIPQSRA
deeps_03995840	2199352024	Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAAGPTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQR
Ga0066395_108247862	3300004633	Tropical Forest Soil	MAESAEPPRAPQWRDALVPELRALSPWLDVPPAADQAATVRQRLEAQQNPQTRQRPQARTRPIARWRTRVLYPRWRAALIAALTILALAVAIPQSRAVIVHVLRLDGVELRQAPGP
Ga0066816_10276752	3300005158	Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAGQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALVVALTVIALAVAIPQSRAVIAHVLRIDGVELRQAPGPSPAPHPSLPGEQRMPLEQARQ
Ga0066675_111250981	3300005187	Soil	MAESSGPRHGPRWQDTLVSELRALSPRLDVPPAAEQATTVRQRLDAQQRPEARPPVIARWRARILYPRWRAALIVALTVI
Ga0068868_1003735952	3300005338	Miscanthus Rhizosphere	MAESSGPRHGPQWRDGLVSELRALSPRLDVPPAAEQATTVRQRLEAQQRQAARPPLIARWRARILYPRWRAALIVALTVVALA
Ga0070691_110374342	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAI
Ga0070659_1014212432	3300005366	Corn Rhizosphere	MAESSGSGRALQWQDAVASELRALSSRLDLPPAADQAAVVRQRLDAERHEGTRPRWRARPGSAARWRVRILYPRWRAALVVVLTAVALAVAIPQSRAAIAHVLRLDGVELHQAPGPSPAPHPSLPGEQRMTLEQ
Ga0070709_110754141	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAESPGFRDGPQWRDALVSELRALGPRLDVPPAAEQATTVRQRLAAQQRREARPALIARWRARILYPRWRAALIVALTIVALAVAIPQSRAVIAHVLRLDGVE
Ga0070714_1009698822	3300005435	Agricultural Soil	VSELRVLSAQIDVPPAAEQAAAVRQRLEGQQRPQARPQPIARWRARMLYPRWRAALIVALTVVALAVAIPQSRAAIAHVLRLD
Ga0070710_104619551	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAESPGFRDGPQWRDALVSELRALGPRLDVPPAAEQATTVRQRLAAQQRPEARPALIARWRARILYPRWRAALIVALTIVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAP
Ga0070710_113172551	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MADSSGPRHGPQWRDALVSELRALSPRLDVPPAAQQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSP
Ga0070710_113956021	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQATTVRQRLEAQQHPQARPPLIARWRPRILHPRWRAALIVALTFAALAMAIPQSRAVITHVLRLDGVELRQA
Ga0066682_107639232	3300005450	Soil	MAESSGPRHGPQWQDALVSELRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPSVIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAP
Ga0070706_1011445392	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAVQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVE
Ga0070698_1017201021	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAVQATTVRQRLEAQQRPEARPPRIARWRARILYPRWRAALIVALTVVALAVAIPQSRAV
Ga0070699_1010928361	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQHPAARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLEQAR
Ga0070679_1013118861	3300005530	Corn Rhizosphere	MAESSGSGRAPQWQDAVASELRALSSRLDLPPAADQAAVVRQRLDAERHEGTRPRWRARPGSAARWRVRILYPRWRAALVVVLTAVALAVAIPQSRAAIAHVLRLD
Ga0070695_1002806892	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQRRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLEQARHRVA
Ga0070695_1007238092	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQATTVRQRLEAQQHPQARPPLIARWRPRILHPRWRAALIVALTFAALAMAIPQSRAVITHVLRLDGVELRQAPGPSPAPHPSLPGEQ
Ga0070693_1000151801	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAADQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTV
Ga0070665_1012268132	3300005548	Switchgrass Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAADQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQS
Ga0068861_1008581222	3300005719	Switchgrass Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVA
Ga0068858_1009179182	3300005842	Switchgrass Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLEQARHRVAFPI
Ga0070712_1007022161	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAESPGFRDGPQWRDALVSELRALGPRLDVPPAAEQATTVRQRLAAQQRREARPALIARWRARILYPRWRAALIVALTIVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAP
Ga0074055_118477221	3300006573	Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAGQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVAL
Ga0074057_123046174	3300006605	Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAGQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALVVALTVIALAVAIPQSRAVIAHVLRLDGV
Ga0079222_116521591	3300006755	Agricultural Soil	MAESPGFRDGPQWRDALVSELRALGPRLDVPPAAEQATTVRQRLTAQQRPEARPALIARWRARILYPRWRAALIVALTIVALAVAIPQSRAVIAHVLRLDGVEFRQAPGPSPAPHPSLPGEQRMPLEQARHR
Ga0079220_105557842	3300006806	Agricultural Soil	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLEQARHRVAFPILV
Ga0079220_118130272	3300006806	Agricultural Soil	MAESSGARHGPQWRDALVSELRALSPRLDVPPAAEQATAVRQRLEAQQRQQARPPLIARWRPRILYPRWRAALIVALTVAGLAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLEQ
Ga0075424_1006296392	3300006904	Populus Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPAARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPG
Ga0079219_116827342	3300006954	Agricultural Soil	MAESPGFRDGPQWRDALVSELRALGPRLDVPPAAEQATTVRQRLTAQQRPEARPALIARWRARILYPRWRAALIVALTIVALAVAIPQSRAVIAHVLRLDGVE
Ga0079219_121777851	3300006954	Agricultural Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQAATVRQRLEARQRPEARPPLIARWRPRILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPS
Ga0099795_100363381	3300007788	Vadose Zone Soil	VSELRALSPRLDVPPAAEQATTVRRRLEAQQHPEARPRLITRWRARILHPRWRAALIAALTVAALAVAIPQSRAVIAHVLRLDGVELRPAPGPSPAPHPSLPGEQRMPLEQARQ
Ga0105240_127734402	3300009093	Corn Rhizosphere	MAESSGSGRAPQWQDAVASELRALSSRLDLPPAADQAAVVRQRLDAERHEGTRPRWRARPGSAARWHVRILYPRWRAALVVVLTAVALAVAIPQSRAAIAHVLRLDGVEL
Ga0105247_110895701	3300009101	Switchgrass Rhizosphere	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAADQAATVRQRLEAQQRPEARPPLTARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVL
Ga0105247_115921202	3300009101	Switchgrass Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAADQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVL
Ga0075423_118326751	3300009162	Populus Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPAARPPLIARWRARILYPRW
Ga0105242_105350991	3300009176	Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAADQAATVRQRLEAQQRPEARPPLTARWRARILYPRWRAALIVALTVVALAVA
Ga0105248_112505862	3300009177	Switchgrass Rhizosphere	VSDLRALSPRLDVPPAAEQATTVHQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPH
Ga0105237_108460201	3300009545	Corn Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQRRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLEQARHR
Ga0126374_110891502	3300009792	Tropical Forest Soil	MAESSDPRHGPQWRDALVSELRALSPWLDVPSAAEQATAVRQRLETQRLETQRLETQRRQEAGPPLIARWRARILYPRWRAALIVALTIVALAVAIPQSRAVIAHVLRL
Ga0126380_100099861	3300010043	Tropical Forest Soil	MAESSDPRHGPQWRDALVSELRALSPWLDVPSATEQATAVRQRLETQRPETQRQEARPPLIARWRARILYPRWRAALIVALTIVALAVAIPQSRAVIAHV
Ga0126377_105634812	3300010362	Tropical Forest Soil	MAESSDPRYGPQWRDALVSELRALSPWLDVPSAAEQATAVRQRLETQRLETQRRQEAGPPLIARWRARILYPRWRAALIVALTIVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMSLEQA
Ga0134128_129983612	3300010373	Terrestrial Soil	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQHPAARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRA
Ga0105239_126579911	3300010375	Corn Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQRRPEARPPLIARWRARILYPRWRAALIVALTVVA
Ga0134126_117169511	3300010396	Terrestrial Soil	MAESSGTRHGPQWRDALVSELRALSPRLDVPPAAEQATTVRQRLEAQQRQEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRVAIARVLRLDGVEL
Ga0134124_101118894	3300010397	Terrestrial Soil	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLEQAR
Ga0126383_122045461	3300010398	Tropical Forest Soil	MAESAEPPRAPQWRDALVPELRALSPWLDVPPAADQAASVRQRLEAQQNPQTRQRPQARTRPIARWRTRVLYPRWRAALIAALTILALAVAIP
Ga0137379_114924771	3300012209	Vadose Zone Soil	VSELRALSPRLDVPAAADQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEHGMPLEQ
Ga0157355_10041721	3300012493	Unplanted Soil	MAESSGPRHGPQWRDTLVSELRALSPRLDVPPAAGQATTVRQRLEAQQRPQARPPLIARWRARILYPRWRAALIVVLTVVALAVAIPQSRAVIAH
Ga0157319_10277521	3300012497	Arabidopsis Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVRPAAEQATAVRQRLEAQQRPEARPPLISRWRARILYPRWRAA
Ga0157314_10087171	3300012500	Arabidopsis Rhizosphere	MAEFSGPRYGPQWRDALVSELRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALSVVALAVAIPQSRA
Ga0157351_10026851	3300012501	Unplanted Soil	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPQARPPLIARWRARILYPRWRAALIVVLTVVALAV
Ga0137396_100986914	3300012918	Vadose Zone Soil	MAESSRPRHGPQWRDALVSELRALSPRLDVPPAAEQATTVLRRLEARQRPRARPPLIARWRARILYPRWRAALIVALTVVALAMAIPQSRAVIAHVLRLDGVELRQAPG
Ga0164301_100192092	3300012960	Soil	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRVRILYPRWRAA*
Ga0164308_112121372	3300012985	Soil	VSELRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRVRILYPRWRAALIVALTAVALAVAIPQSRAVIAHVLRLDGVELRQA
Ga0164306_117247862	3300012988	Soil	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRVRILYPRWRAALIVALTAVAL
Ga0157369_126592731	3300013105	Corn Rhizosphere	VSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAP
Ga0157374_121077672	3300013296	Miscanthus Rhizosphere	VSELRALSPRLDVPPAAEQATTVRQRLEAQQHPQARPPLIARWRPRILHPRWRAALIVALTFAALAMAIPQSRAVITHVLRLDGVELRQAPGPSPAP
Ga0157377_106664021	3300014745	Miscanthus Rhizosphere	MAESSGPHHGPQWRDALVSELRALSPRLDVPPAAEQATAVRQRLEALQRPEARPPLTARWRARILYPRWRAALIVALTVVALAVAIPQSRA
Ga0157379_101524091	3300014968	Switchgrass Rhizosphere	MAESSGPRHGPQWRDALVSDLRAPSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLTARWRARILYPRWRAALIVALTVVALAVAIPQSR
Ga0157376_106898111	3300014969	Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRA
Ga0134072_103234942	3300015357	Grasslands Soil	MAESSGPRHGPQWRDALVSELSALSPRLDVPPAADQAATVRQRLEARQLPEARPPLIAHWRARILYPRWRAALIAALTVVALAVAIPQSRAVIAHVLRLDGVELRQ
Ga0132256_1011499052	3300015372	Arabidopsis Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPQARPPLIARWRARILYPRWRAALVVALTIVALAVAIPQSRAVIAHVLRLDGVEIRQVPG
Ga0066667_107534332	3300018433	Grasslands Soil	MAESSGARHGPQWRDALVSELRALSPRLDVPPAAEQATTVRQHLEAQQRQEARPPLIARWRARILYPRWRAALIVALTVIALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLEQA
Ga0206356_108197603	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPAARPPLIARWRARILYPRWRAALIVALTVVA
Ga0179594_101950041	3300020170	Vadose Zone Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQATTVRQRLEAQQRPVARPPLLARWRPRILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVE
Ga0179592_102195452	3300020199	Vadose Zone Soil	MAESSRPRHGPQWRDALVSELRALSPRLDVPPAAEQATTVRQRLEAQQHPEARHRLIARWRARILHPRWR
Ga0193719_104191552	3300021344	Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQAITVRQRLEALERQEGRPPLIARWRARILYPRWRAALIVALTVVALAVAIPQ
Ga0210385_111725252	3300021402	Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQTTTVRQRLEAQQRPEARPPLIARWRARILSPRWRAALIVALTVVALAVAIPQSRAAIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLGQARQRV
Ga0210389_114979042	3300021404	Soil	MAEPSGSPRARQWEDALVSELRALSPRLDVPAAAEQTAAVCQRLSARQRPKKRPQPIARWRARILYPRWRAALIVALTV
Ga0210387_108632151	3300021405	Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQATTVRQRLEAQRRPEARPPLIARWRARILYPRWRAALIAALTVVALAVAIPQSRAVIARVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLE
Ga0210387_115162051	3300021405	Soil	MAEPSGSPRARQWEDALVSELRALSPRLDVPPAAEQAAAVCQRLSARQRPKKRPQPIARWRARILYPRWRAALIVALTVVALAAAIPQSRAAIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLGQARQRVAF
Ga0210398_108794431	3300021477	Soil	MAEPSGSPRARQWEDALVSELRALSPRLDVPPAAEQAAAVCQRLSARQRPKKRPQPIARWRARILYPRWRAALIV
Ga0210409_110002691	3300021559	Soil	MAESSGPRHGPQWQDALVPELRALSPRLDVPPAADQAATVRQRLEAQQRPQARQRPPLIPRWRARILYPRWRAALIAALTVVALAVAIPQSRAVIAHVLRL
Ga0126371_104330081	3300021560	Tropical Forest Soil	MAESAEPPRAPQWRDALVPELRALSPWLDVPPAADQAATVRQRLEAQQNPQTRQRPQARARPIARWRTRVLYPRWRAALIAALTILA
Ga0247691_10158783	3300024222	Soil	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALT
Ga0247677_10315412	3300024245	Soil	MAESSGSRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTV
Ga0247666_10578611	3300024323	Soil	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAH
Ga0207692_105287682	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MAESPGFRDGPQWRDALVSELRALGPRLDVPPAAEQATTVRQRLAAQQRPEARPALIARWRARILYPRWRAALIVALTIVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPH
Ga0207692_106540581	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPAARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSL
Ga0207680_104593803	3300025903	Switchgrass Rhizosphere	MAESSGSRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLEQARHRVAFPILVP
Ga0207645_102324171	3300025907	Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQATAVRQRLEALQRPEARPPLTARWRARILYPRWRAALIVALTVVALAVAIPQSRAAIARVLRLDGVELRQAPGPSPA
Ga0207693_109587892	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAESPGFRDGPQWRDALVSELRALGPRLDVPPAAEQATTVRQRLAAQQRREARPALIARWRARILYPRWRAALIVALTIVALAVAIPQSRAVIAHVLRLDGVELRQAPGPS
Ga0207693_109587902	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQHPAARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPS
Ga0207663_109622442	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MADSSGPRHGPQWRDALVSELRALSPRLDVPPAADQAATVRQRLEAQQRPEARPPLTARWRARILYPRWRAALIVALTVVALAVAIPQSRA
Ga0207660_102672631	3300025917	Corn Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGV
Ga0207659_100284151	3300025926	Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQRRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQS
Ga0207687_110488473	3300025927	Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQRRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAV
Ga0207690_110414482	3300025932	Corn Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQHPAARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAAIAHVLR
Ga0207704_101959343	3300025938	Miscanthus Rhizosphere	MAESSGSRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGV
Ga0207651_118632292	3300025960	Switchgrass Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQHPAARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAH
Ga0207703_109892702	3300026035	Switchgrass Rhizosphere	MAESSGSGRAPQWQDAVASELRALSSRLDLPPAADQAAVVRQRLDAERHEGTRPRWRARPGSAARWRVRILYPRWRAALVVVLTAVALAVAIPQSRAAIAHVLRLDGVEWLGQPTTVTVS
Ga0207639_107267952	3300026041	Corn Rhizosphere	MAESSGPRHGPQWRDGLVSELRALSPRLDVPPAAEQATTVRQRLEAQQRQAARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLEQARHRV
Ga0207708_101956763	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAV
Ga0179587_101075114	3300026557	Vadose Zone Soil	MAESSRPRHGPQWRDALVSELRALSPRLDVPPAAEQATTVLRRLEARQRPRARPPLIARWRARILYPRWRAALIV
Ga0209178_11571621	3300027725	Agricultural Soil	MAESSGARHGPQWRDALVSELRALSPRLDVPPAAEQATAVRQRLEAQQRQQARPPLIARWRARILYPRWRAALIVALTVVVLAVAIPQSRAVIAHVLRLDGVE
Ga0209177_104587392	3300027775	Agricultural Soil	MAESPGFRDGPQWRDALVSELRALGPRLDVPPAAEQATTVRQRLTAQQRPEARPALIARWRARILYPRWRAALIVALTIVALAVAIPQSRAVIAHVLRLDGVEFRQAPGPSPAPHPS
Ga0268266_113052011	3300028379	Switchgrass Rhizosphere	MAESSGSGRAPQWQDAVASELRALSSRLDLPPAADQAAVVRQRLDAERREGTRPRWRARPGSAARWRVRILYPRWRAALVVVLTAVALAVAI
Ga0268264_107794553	3300028381	Switchgrass Rhizosphere	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAADQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAAIAHVLR
Ga0307303_101649451	3300028713	Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVAALAVAVPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQGMPLEQARQRVAFPVL
Ga0307313_100434993	3300028715	Soil	MAESSGPRHGPQWRDALVSELRVLSPRLDVPPAAEQAITVRQRLEALERQEGRPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQGMPLEQARQRVAFP
Ga0307307_100842811	3300028718	Soil	MAESSGPRHGPQWRDALVSELRVLSPRLDVPPAAEQAITVRQRLEALERQEGRPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVI
Ga0307283_101546622	3300028790	Soil	MAESSGPRHGPQWRDALVSELRVLSPRLDVPPAAEQAITVRQRLEALERQEGRPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQGMPLE
Ga0307305_100194161	3300028807	Soil	MAESSGPRHGPQWRDALVSELRVLSPRLDVPPAAEQAITVRQRLEALERQEGRPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQGMPLEQARQRVAFPVLVQ
Ga0307310_103634372	3300028824	Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQAITVRQRLEALERQEGRPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQGMP
Ga0307312_100676981	3300028828	Soil	MAESSGPRHGPQWRDALVSELRVLSPRLDVPPAAEQAITVRQRLEALERQEGRPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQGMPLEQARQRVAFPVLV
Ga0307314_103076911	3300028872	Soil	MAESSGPRHGPQWRDALVSELRVLSPRLDVPPAAEQAITVRQRLEALERQEGRPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQGMPLEQAR
Ga0310813_104486722	3300031716	Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQATTVRRRLEARQRPEARPPLIARWRERILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLVQARQRAAFP
Ga0307474_114919402	3300031718	Hardwood Forest Soil	MAESSGLRHGPQWRDALVSELRALSPRLDVPPAAEQATIVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRIDGVELRQAPGPSPAPHPSLPG
Ga0307469_120700911	3300031720	Hardwood Forest Soil	MAESSGTRHGPQWRDALVSELRALSPRLDVPPAAEQATTVRQRLEAQQRQEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVE
Ga0307468_1006429672	3300031740	Hardwood Forest Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQATTVRQRLEAQQHPQARPPLIARWRPRILHPRWRAALIVALTFAALAMAIPQSRAVITHVLRLDGVELRQAPGPSPAPHPSLPG
Ga0310904_109492802	3300031854	Soil	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHP
Ga0308174_114580601	3300031939	Soil	MAESSGPRHGPQWRDALVSELSALSPRLDVPPAADQAATVRQRLEARPRPEARPPLIAHWRARILYPRWRAALILALTIVALAVAIP
Ga0308176_117079822	3300031996	Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQATTVRQRLEAQQRPQARPPLIARWRARILYPRWRAALIVALTALALA
Ga0307470_117594752	3300032174	Hardwood Forest Soil	MAESSGPRHGPQWRDGLVSELRALSPRLDVPPAAEQATTVRQRLEARQRQAARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELR
Ga0307471_1025528161	3300032180	Hardwood Forest Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQATTVRQRLEAQQRQEARPPLIARWRARILYPRWRAALIVALTVVAMAVAIPQSRAVI
Ga0307472_1013624801	3300032205	Hardwood Forest Soil	MAESSGPRHGPQWRDALVSDLRALSPRLDVPPAAEQATTVRQRLEAQQRPEARPPLIARWRARILYPRWRA
Ga0307472_1014628822	3300032205	Hardwood Forest Soil	MAESSGTRHGPQWRDALVSELRALSPRLDVPPAAEQATTVRQRLEAQQRQEARPPLIARWRARILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQGMPLERARQHVAFPI
Ga0310812_103163161	3300032421	Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQASTVRQRLEARQRPQSRPPLIARWRPRILYPRWRAALIVALTFVALAMAI
Ga0335072_112601882	3300032898	Soil	MAESSAPRHGPLSRDALASELRALSPWLDVPAAAVQATAVRQRLEAEQRQVARPPLIARWRARILYPRWRAALIVALTIVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRMPLGQARQRVAFPI
Ga0335083_115548181	3300032954	Soil	MAESSGPHHGPQWRDALVSELRALSPRLDVPPAAEQAAAVRQRLEAQQHPEARPQLIARWRARILYPRWRAALIVVLTVVALAVAIPQSRAVIARVLRLDGVELRQAPGPSLAPHPSLPGEQRMP
Ga0310811_106853912	3300033475	Soil	MAESSGPRHGPQWRDALVSELRALSPRLDVPPAAEQASTVRQRLEARQRTEARPPLIARWRPRILYPRWRAALIVALTVVALAVAIPQSRAVIAHVLRLDGVELRQAPGPSPAPHPSLPGEQRM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066985

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences