NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F066993

Metagenome / Metatranscriptome Family F066993

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F066993
Family Type Metagenome / Metatranscriptome
Number of Sequences 126
Average Sequence Length 62 residues
Representative Sequence APFDAFRAGLRPRERYAVDVPPGARGPFITRGAVVRAYAAFYFLPAIQVEQADHVFHYRFR
Number of Associated Samples 114
Number of Associated Scaffolds 126

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.60 %
% of genes near scaffold ends (potentially truncated) 91.27 %
% of genes from short scaffolds (< 2000 bps) 92.06 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.619 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(22.222 % of family members)
Environment Ontology (ENVO) Unclassified
(32.540 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.175 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 30.34%    β-sheet: 0.00%    Coil/Unstructured: 69.66%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 126 Family Scaffolds
PF11799IMS_C 5.56
PF13231PMT_2 1.59
PF01039Carboxyl_trans 1.59
PF07883Cupin_2 0.79
PF08281Sigma70_r4_2 0.79
PF01795Methyltransf_5 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 126 Family Scaffolds
COG0777Acetyl-CoA carboxylase beta subunitLipid transport and metabolism [I] 1.59
COG0825Acetyl-CoA carboxylase alpha subunitLipid transport and metabolism [I] 1.59
COG4799Acetyl-CoA carboxylase, carboxyltransferase componentLipid transport and metabolism [I] 1.59
COG027516S rRNA C1402 N4-methylase RsmHTranslation, ribosomal structure and biogenesis [J] 0.79

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.62 %
UnclassifiedrootN/A2.38 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig111784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium583Open in IMG/M
2199352025|deepsgr__Contig_159777All Organisms → cellular organisms → Bacteria → Terrabacteria group3230Open in IMG/M
2228664022|INPgaii200_c0932111All Organisms → cellular organisms → Bacteria → Terrabacteria group650Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105821023All Organisms → cellular organisms → Bacteria1895Open in IMG/M
3300000956|JGI10216J12902_104026529All Organisms → cellular organisms → Bacteria → Terrabacteria group1084Open in IMG/M
3300002568|C688J35102_119977380All Organisms → cellular organisms → Bacteria → Terrabacteria group833Open in IMG/M
3300002568|C688J35102_120470614All Organisms → cellular organisms → Bacteria → Terrabacteria group1095Open in IMG/M
3300002568|C688J35102_120695161All Organisms → cellular organisms → Bacteria → Terrabacteria group1368Open in IMG/M
3300003203|JGI25406J46586_10196381All Organisms → cellular organisms → Bacteria → Terrabacteria group589Open in IMG/M
3300004114|Ga0062593_100140264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1809Open in IMG/M
3300004480|Ga0062592_101558071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium636Open in IMG/M
3300004643|Ga0062591_100691330All Organisms → cellular organisms → Bacteria → Terrabacteria group921Open in IMG/M
3300004643|Ga0062591_101752024All Organisms → cellular organisms → Bacteria → Terrabacteria group632Open in IMG/M
3300005162|Ga0066814_10108700All Organisms → cellular organisms → Bacteria → Terrabacteria group527Open in IMG/M
3300005172|Ga0066683_10569034All Organisms → cellular organisms → Bacteria → Terrabacteria group690Open in IMG/M
3300005175|Ga0066673_10085717All Organisms → cellular organisms → Bacteria → Terrabacteria group1665Open in IMG/M
3300005176|Ga0066679_10222966All Organisms → cellular organisms → Bacteria → Terrabacteria group1208Open in IMG/M
3300005180|Ga0066685_10886581All Organisms → cellular organisms → Bacteria → Terrabacteria group597Open in IMG/M
3300005339|Ga0070660_101058275All Organisms → cellular organisms → Bacteria → Terrabacteria group686Open in IMG/M
3300005340|Ga0070689_101022173All Organisms → cellular organisms → Bacteria → Terrabacteria group736Open in IMG/M
3300005355|Ga0070671_100381222All Organisms → cellular organisms → Bacteria → Terrabacteria group1205Open in IMG/M
3300005436|Ga0070713_101507836All Organisms → cellular organisms → Bacteria → Terrabacteria group652Open in IMG/M
3300005553|Ga0066695_10086990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1904Open in IMG/M
3300005558|Ga0066698_10437601All Organisms → cellular organisms → Bacteria → Terrabacteria group894Open in IMG/M
3300005578|Ga0068854_100877081All Organisms → cellular organisms → Bacteria → Terrabacteria group787Open in IMG/M
3300005615|Ga0070702_101589543All Organisms → cellular organisms → Bacteria → Terrabacteria group540Open in IMG/M
3300005615|Ga0070702_101814086All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium510Open in IMG/M
3300005713|Ga0066905_100667524All Organisms → cellular organisms → Bacteria → Terrabacteria group888Open in IMG/M
3300005840|Ga0068870_10763619All Organisms → cellular organisms → Bacteria → Terrabacteria group672Open in IMG/M
3300005841|Ga0068863_101513508All Organisms → cellular organisms → Bacteria → Terrabacteria group680Open in IMG/M
3300005937|Ga0081455_10222383All Organisms → cellular organisms → Bacteria → Terrabacteria group1398Open in IMG/M
3300006034|Ga0066656_10820950All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium595Open in IMG/M
3300006175|Ga0070712_100348192All Organisms → cellular organisms → Bacteria → Terrabacteria group1212Open in IMG/M
3300006577|Ga0074050_11463856All Organisms → cellular organisms → Bacteria → Terrabacteria group506Open in IMG/M
3300006806|Ga0079220_11150687All Organisms → cellular organisms → Bacteria → Terrabacteria group634Open in IMG/M
3300006904|Ga0075424_102555776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium534Open in IMG/M
3300006954|Ga0079219_10131537All Organisms → cellular organisms → Bacteria → Terrabacteria group1298Open in IMG/M
3300007076|Ga0075435_101500276All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300009088|Ga0099830_10384422All Organisms → cellular organisms → Bacteria → Terrabacteria group1133Open in IMG/M
3300009098|Ga0105245_10995272All Organisms → cellular organisms → Bacteria → Terrabacteria group882Open in IMG/M
3300009137|Ga0066709_101076551All Organisms → cellular organisms → Bacteria → Terrabacteria group1181Open in IMG/M
3300009137|Ga0066709_102547865All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium688Open in IMG/M
3300009143|Ga0099792_10817657All Organisms → cellular organisms → Bacteria → Terrabacteria group611Open in IMG/M
3300009147|Ga0114129_12712343All Organisms → cellular organisms → Bacteria → Terrabacteria group590Open in IMG/M
3300009176|Ga0105242_12420595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium573Open in IMG/M
3300009551|Ga0105238_10086954All Organisms → cellular organisms → Bacteria → Terrabacteria group3113Open in IMG/M
3300009789|Ga0126307_11554800All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium537Open in IMG/M
3300009811|Ga0105084_1108308All Organisms → cellular organisms → Bacteria → Terrabacteria group529Open in IMG/M
3300009836|Ga0105068_1067782All Organisms → cellular organisms → Bacteria → Terrabacteria group664Open in IMG/M
3300010301|Ga0134070_10184100All Organisms → cellular organisms → Bacteria → Terrabacteria group760Open in IMG/M
3300010336|Ga0134071_10477929All Organisms → cellular organisms → Bacteria → Terrabacteria group641Open in IMG/M
3300011998|Ga0120114_1044476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium878Open in IMG/M
3300012003|Ga0120163_1112932All Organisms → cellular organisms → Bacteria → Terrabacteria group588Open in IMG/M
3300012005|Ga0120161_1125573All Organisms → cellular organisms → Bacteria → Terrabacteria group588Open in IMG/M
3300012019|Ga0120139_1109893All Organisms → cellular organisms → Bacteria → Terrabacteria group698Open in IMG/M
3300012096|Ga0137389_10451002All Organisms → cellular organisms → Bacteria → Terrabacteria group1101Open in IMG/M
3300012189|Ga0137388_10872030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium833Open in IMG/M
3300012198|Ga0137364_11331884All Organisms → cellular organisms → Bacteria → Terrabacteria group534Open in IMG/M
3300012204|Ga0137374_10585262All Organisms → cellular organisms → Bacteria → Terrabacteria group853Open in IMG/M
3300012204|Ga0137374_10856666All Organisms → cellular organisms → Bacteria → Terrabacteria group670Open in IMG/M
3300012285|Ga0137370_10858210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium562Open in IMG/M
3300012354|Ga0137366_10636486All Organisms → cellular organisms → Bacteria → Terrabacteria group763Open in IMG/M
3300012356|Ga0137371_10834589All Organisms → cellular organisms → Bacteria → Terrabacteria group702Open in IMG/M
3300012910|Ga0157308_10406355All Organisms → cellular organisms → Bacteria → Terrabacteria group530Open in IMG/M
3300012922|Ga0137394_10197640All Organisms → cellular organisms → Bacteria → Terrabacteria group1716Open in IMG/M
3300012929|Ga0137404_10475027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1112Open in IMG/M
3300012955|Ga0164298_10714884All Organisms → cellular organisms → Bacteria → Terrabacteria group705Open in IMG/M
3300012975|Ga0134110_10510435All Organisms → cellular organisms → Bacteria → Terrabacteria group548Open in IMG/M
3300013100|Ga0157373_10311618All Organisms → cellular organisms → Bacteria → Terrabacteria group1118Open in IMG/M
3300013105|Ga0157369_11387996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium715Open in IMG/M
3300013763|Ga0120179_1112156All Organisms → cellular organisms → Bacteria → Terrabacteria group600Open in IMG/M
3300014031|Ga0120173_1001213Not Available3524Open in IMG/M
3300014058|Ga0120149_1086340All Organisms → cellular organisms → Bacteria → Terrabacteria group828Open in IMG/M
3300014150|Ga0134081_10360163All Organisms → cellular organisms → Bacteria → Terrabacteria group536Open in IMG/M
3300014157|Ga0134078_10281143All Organisms → cellular organisms → Bacteria → Terrabacteria group709Open in IMG/M
3300018061|Ga0184619_10199946All Organisms → cellular organisms → Bacteria → Terrabacteria group918Open in IMG/M
3300018066|Ga0184617_1014445All Organisms → cellular organisms → Bacteria → Terrabacteria group1653Open in IMG/M
3300018071|Ga0184618_10122050All Organisms → cellular organisms → Bacteria → Terrabacteria group1042Open in IMG/M
3300018076|Ga0184609_10515567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium543Open in IMG/M
3300019279|Ga0184642_1532379All Organisms → cellular organisms → Bacteria → Terrabacteria group635Open in IMG/M
3300019866|Ga0193756_1027787All Organisms → cellular organisms → Bacteria → Terrabacteria group796Open in IMG/M
3300019868|Ga0193720_1001128Not Available3454Open in IMG/M
3300019873|Ga0193700_1069338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium525Open in IMG/M
3300019886|Ga0193727_1000687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria13421Open in IMG/M
3300019890|Ga0193728_1363148All Organisms → cellular organisms → Bacteria → Terrabacteria group514Open in IMG/M
3300020002|Ga0193730_1045771All Organisms → cellular organisms → Bacteria → Terrabacteria group1265Open in IMG/M
3300020018|Ga0193721_1051683All Organisms → cellular organisms → Bacteria → Terrabacteria group1080Open in IMG/M
3300021080|Ga0210382_10321287All Organisms → cellular organisms → Bacteria → Terrabacteria group682Open in IMG/M
3300021080|Ga0210382_10550535All Organisms → cellular organisms → Bacteria → Terrabacteria group511Open in IMG/M
3300021510|Ga0222621_1030565All Organisms → cellular organisms → Bacteria → Terrabacteria group1107Open in IMG/M
3300023058|Ga0193714_1051142All Organisms → cellular organisms → Bacteria → Terrabacteria group593Open in IMG/M
3300025908|Ga0207643_10855703All Organisms → cellular organisms → Bacteria → Terrabacteria group589Open in IMG/M
3300025912|Ga0207707_11104713All Organisms → cellular organisms → Bacteria → Terrabacteria group646Open in IMG/M
3300025927|Ga0207687_11016181All Organisms → cellular organisms → Bacteria → Terrabacteria group711Open in IMG/M
3300025934|Ga0207686_10706642All Organisms → cellular organisms → Bacteria → Terrabacteria group802Open in IMG/M
3300026121|Ga0207683_11438780All Organisms → cellular organisms → Bacteria → Terrabacteria group637Open in IMG/M
3300026300|Ga0209027_1122290All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300026301|Ga0209238_1209587All Organisms → cellular organisms → Bacteria → Terrabacteria group572Open in IMG/M
3300026342|Ga0209057_1205551All Organisms → cellular organisms → Bacteria → Terrabacteria group559Open in IMG/M
3300026343|Ga0209159_1240127All Organisms → cellular organisms → Bacteria → Terrabacteria group553Open in IMG/M
3300026540|Ga0209376_1365081All Organisms → cellular organisms → Bacteria → Terrabacteria group543Open in IMG/M
3300026548|Ga0209161_10078776All Organisms → cellular organisms → Bacteria2046Open in IMG/M
3300026552|Ga0209577_10540767All Organisms → cellular organisms → Bacteria → Terrabacteria group749Open in IMG/M
3300027006|Ga0209896_1010571All Organisms → cellular organisms → Bacteria → Terrabacteria group994Open in IMG/M
3300027465|Ga0207626_101387All Organisms → cellular organisms → Bacteria → Terrabacteria group737Open in IMG/M
3300027577|Ga0209874_1006802All Organisms → cellular organisms → Bacteria → Terrabacteria group3431Open in IMG/M
3300027915|Ga0209069_10320514All Organisms → cellular organisms → Bacteria → Terrabacteria group828Open in IMG/M
3300028707|Ga0307291_1075651All Organisms → cellular organisms → Bacteria → Terrabacteria group827Open in IMG/M
3300028716|Ga0307311_10018137All Organisms → cellular organisms → Bacteria → Terrabacteria group1730Open in IMG/M
3300028716|Ga0307311_10168006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium635Open in IMG/M
3300028719|Ga0307301_10184176All Organisms → cellular organisms → Bacteria → Terrabacteria group676Open in IMG/M
3300028720|Ga0307317_10176033All Organisms → cellular organisms → Bacteria → Terrabacteria group721Open in IMG/M
3300028722|Ga0307319_10167249All Organisms → cellular organisms → Bacteria → Terrabacteria group715Open in IMG/M
3300028722|Ga0307319_10316878All Organisms → cellular organisms → Bacteria → Terrabacteria group517Open in IMG/M
3300028768|Ga0307280_10401571All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium511Open in IMG/M
3300028771|Ga0307320_10087523All Organisms → cellular organisms → Bacteria → Terrabacteria group1176Open in IMG/M
3300028784|Ga0307282_10017537All Organisms → cellular organisms → Bacteria → Terrabacteria group2966Open in IMG/M
3300028784|Ga0307282_10026142All Organisms → cellular organisms → Bacteria → Terrabacteria group2491Open in IMG/M
3300028784|Ga0307282_10134312All Organisms → cellular organisms → Bacteria → Terrabacteria group1165Open in IMG/M
3300028787|Ga0307323_10056601All Organisms → cellular organisms → Bacteria → Terrabacteria group1386Open in IMG/M
3300028787|Ga0307323_10152361All Organisms → cellular organisms → Bacteria → Terrabacteria group834Open in IMG/M
3300028791|Ga0307290_10086049All Organisms → cellular organisms → Bacteria → Terrabacteria group1144Open in IMG/M
3300028810|Ga0307294_10259295All Organisms → cellular organisms → Bacteria → Terrabacteria group619Open in IMG/M
3300028881|Ga0307277_10165096All Organisms → cellular organisms → Bacteria → Terrabacteria group963Open in IMG/M
3300031184|Ga0307499_10306142All Organisms → cellular organisms → Bacteria → Terrabacteria group525Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil22.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.90%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.52%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost5.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.97%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.17%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.17%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.17%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.17%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand3.17%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.17%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.38%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.38%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.59%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.59%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.59%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.79%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.79%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.79%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.79%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.79%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003203Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005162Soil and rhizosphere microbial communities from Laval, Canada - mgLABEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009811Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30EnvironmentalOpen in IMG/M
3300009836Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300011998Permafrost microbial communities from Nunavut, Canada - A30_35cm_6MEnvironmentalOpen in IMG/M
3300012003Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25MEnvironmentalOpen in IMG/M
3300012005Permafrost microbial communities from Nunavut, Canada - A15_80cm_0MEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013763Permafrost microbial communities from Nunavut, Canada - A15_65cm_0MEnvironmentalOpen in IMG/M
3300014031Permafrost microbial communities from Nunavut, Canada - A35_80cm_0.25MEnvironmentalOpen in IMG/M
3300014058Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25MEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019866Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1EnvironmentalOpen in IMG/M
3300019868Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1EnvironmentalOpen in IMG/M
3300019873Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300023058Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1EnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027006Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027465Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK03-A (SPAdes)EnvironmentalOpen in IMG/M
3300027577Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_129270002124908045SoilERRHAAGDRLGLRAAPFDAFRLQLRERERYAVDVPPGPRGPFITQGEVVRAYAAFYFLPAIQVPAAEHVFRFRFR
deepsgr_026502502199352025SoilLRPKERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRADRVFHYRFR
INPgaii200_093211122228664022SoilAGDRLHLDPAPFDAFLARLGPHSRYAVDVPAGERGPFITRGEVVRAYAAFYFLPAIQVRHAPLVFHYRFR
INPhiseqgaiiFebDRAFT_10582102313300000364SoilHAAGDRLHLXPAPFDAFLARLGPHSRYAVDVPAGERGPFITRGEVVRAYAAFYFLPAIQVRHAPLVFHYRFR*
JGI10216J12902_10402652923300000956SoilPAPFDTFRAGLRPRERYAVNVPSGARGPFITRGEVVRAYSAFFFLPAIQVRKADRVFHYRFP*
C688J35102_11997738023300002568SoilPRTRYAVDVPPGARGPFITRGAVVRAYAAFYFLPAIQVPRAPLVFHYRFR*
C688J35102_12047061413300002568SoilFEAFAARLSPRARYRVDVPAGAQGPFITRGAVVRAYAAFYFLPAIQVRRAPLVFHYRFR*
C688J35102_12069516123300002568SoilAPFDAFRAEVKPRRRYAVDVPPGQQGPFITRGAVVRAYAAFFFLPALQVPRAPLVFHYRFR*
JGI25406J46586_1019638123300003203Tabebuia Heterophylla RhizosphereYSVDVPPGEPGPFITEGAVVRAFAAYYFLPAIQVPHAPLVFHYRFK*
Ga0062593_10014026433300004114SoilFDLFRRTLHPRERYAVDVPPGLRGPFITRGEVVRAYAAFSFLPAIQVARAAHVFRYRFR*
Ga0062592_10155807123300004480SoilLTQSERAHAAGDRLRLDPRTFDLFRRTLHPRERYAVDVPPGLRGPFITRGEVVRAYAAFSFLPAIQVARAAHVFRYRFR*
Ga0062591_10069133013300004643SoilAGDRLLLRPAPFDSFRATLRARERYAVDVPPGQRGPSITRGDVVRAYSAFYFLPAIQVPRAQRVFHYRFR*
Ga0062591_10175202423300004643SoilRRHAAGDRLGFDATPFDAFRTRLQPRERYAVHVPPGAKGLFISRGAVVRAYASFYFLPAIQVERANHVFRYRFR*
Ga0062594_10289242323300005093SoilYAVDVPPGQRGPFITRGAVVRAYGAFYFLPAIEVRRAPLVFHYRFR*
Ga0066814_1010870023300005162SoilFDAFRARLRPKERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRADRVFHYRFR*
Ga0066683_1056903413300005172SoilFDSFRATLKPRERYTVDVPPGFKGPSITRGDVVRAYSAFYFLPAIQVPRARRVFHYRFR*
Ga0066673_1008571733300005175SoilHFDPAPFDSFLAQLSPRERYAVDVPPGEQGPFITRGAVVRGYAAFYFLPAIQAPHAPLVFHYRFR*
Ga0066679_1022296613300005176SoilLPRELYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAVQVEQADHVFHYRFR*
Ga0066685_1088658113300005180SoilRRHAAGDRLGLDSAPFDAFRAELRPRELYAVDVPPGARGPFITRGAVVRAYAAFYFLPAIQVDQANHVFHYRFR*
Ga0070660_10105827513300005339Corn RhizosphereASAFDAFRVRLRPRERYAVDVPPGSKGPFITRGAVVRAYAAFYFLPAIQVRRADHVFRYRFP*
Ga0070689_10102217323300005340Switchgrass RhizosphereFDAFRVRLRPRERYAVDVPPGSKGPFITRGAVVRAYAAFYFLPAIQVRRADHVFRYRFP*
Ga0070671_10038122223300005355Switchgrass RhizosphereMLSSAERRHAAGDRLGFDASAFDAFRVRLRPRERYAVDVPPGSKGPFITRGAVVRAYAAFYFLPAIQVRRADHVFRYRFP*
Ga0070713_10150783633300005436Corn, Switchgrass And Miscanthus RhizosphereDAFAARLSPRARYRVDVPPGAQGPFITRGAVVRAYAAFYFLPAIQVRRAPLVFHYRFR*
Ga0066695_1008699033300005553SoilTLKPRERYAVDVPPGQKGPSITRGDVVRAYSAFYFLPAIQVPLAKRVFHYRFR*
Ga0066698_1043760113300005558SoilAAAFDAFRVTLQPRERYAVDVPPGAKGPFITRGTVVRAYAAFYFLPAIQVEQADHVFRYRFR*
Ga0068854_10087708113300005578Corn RhizosphereYAVDVPPGERGPFITRGEVVRAYAAFSFLPAIQVPRAPLVFHYTLP*
Ga0070702_10158954323300005615Corn, Switchgrass And Miscanthus RhizosphereERYAVDVPPGSKGPFITRGAVVRAYAAFFFLPAVQVRRADHVFRYRFP*
Ga0070702_10181408623300005615Corn, Switchgrass And Miscanthus RhizosphereLPPRARYRVDVPPGAQGPFITRGAVVRAYAAFYFLPAIQVRRAPLVFHYRFR*
Ga0066905_10066752413300005713Tropical Forest SoilPRERYAVDVPPGERGPFITRGEIVRAYAAFFFLPAIQVRHAPMVFHYRFR*
Ga0068870_1076361923300005840Miscanthus RhizosphereDAFRVRLRPRERYAVDVPPGSKGPFITRGAVVRAYAAFYFLPAIQVRRADHVFRYRFP*
Ga0068863_10151350823300005841Switchgrass RhizosphereGPKERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRANQVFHYRFR*
Ga0081455_1022238323300005937Tabebuia Heterophylla RhizosphereLRKRSRYKVDVPEGARGPFITRGAVVRAYSAFYFLPAIQTREGGRVFRYRFR*
Ga0066656_1082095013300006034SoilAAGDRIGLEPAPFDAFRARLHPRERFSVDVPPGGRGQFATRGDVVRAYSAFYFLPAIEIGRARAVFHYRFR*
Ga0070712_10034819213300006175Corn, Switchgrass And Miscanthus RhizosphereRHTAGDRLHLDPAPFDAFLAQLAPQRRYAVDVPAGQRGPFITRGAVVRAYAAFYFLPAIQVRRAPLVFHYRFR*
Ga0074050_1146385623300006577SoilARLHAAGDRLGFDPAPFDAFRARLRPKERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRADRVFHYRFR*
Ga0079220_1115068723300006806Agricultural SoilTRYAVDVPPGARGPFITRGAVVRAYSAFYFLPAIQVRHAPLVFHYRFK*
Ga0075424_10255577613300006904Populus RhizosphereRTHAAGDRLKLDPAPFDAFRAQLSPRERYAVDVPPGEQGPFITRGAVVRAYAAFFFLPAIQVGQAPRVFQYRFR*
Ga0079219_1013153713300006954Agricultural SoilRLHLDPRPFDAFAARLSARRRYAVDVPPGAQGPFITRGAVVRAYAAFYFLPAIQVRRAPLVFRYRFR*
Ga0075435_10150027623300007076Populus RhizosphereRLRLDPRPFDVFRRTLRPRARYAVDVPPGPRGPFITRGEVVRAYAAFYFLPAIQVPAAMHVFHYRFR*
Ga0099830_1038442213300009088Vadose Zone SoilDAFRLELRPRERYAVDVPPGAKGSFITRGAVVRGYAAFYFLPAIQVARTDRVFRYRFR*
Ga0105245_1099527213300009098Miscanthus RhizosphereGDRLGFDPVPFDDFRRSLRSRDRYVVDVPEGSRGPFITRGAVVRAYSAFYFLPAIQMRKAERIFRYRFR*
Ga0066709_10107655113300009137Grasslands SoilFRATLRPRERYAVDVPPGQKGPSITRGDVVRAYSAFYFLPAIQVPRAQRVFHYRFK*
Ga0066709_10254786523300009137Grasslands SoilLTPSARRHAAGERLGFDPAPFDAFRAELRPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVEHADHIFHYRFR*
Ga0099792_1081765713300009143Vadose Zone SoilAPFDAFRAGLLPREPYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAVQVEQADHVFHYRFR*
Ga0114129_1271234313300009147Populus RhizosphereNRLGFHPVPFDVFRRSLRPRDRYAVDVPEGSRGPFITRGAVVRAYSAFYFLPAIQVRKAERIFRYRFR*
Ga0105242_1242059513300009176Miscanthus RhizosphereRLGFDPVPFDDFWRSLRSRDRYAVDVPEGSRRPFITRGAVVRAYSAFYFLPAIQMRKAERIFRYRFR*
Ga0105238_1008695433300009551Corn RhizosphereGFDPAPFDAFRARLGPKERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRANQVFHYRFR*
Ga0126307_1155480023300009789Serpentine SoilHAAGNRLGLDPVPFDRFRAGLRARERYAVDVPAGAKGPFITRGEVVRAYSAYFFLPAIQVRKADRVFRYRFP*
Ga0105084_110830813300009811Groundwater SandDPVPFDAFRARLKPRDRYAVDVPPGTKGPFITRGEVVRAYSAFFFLPAVQVRQADPVFRYRSP*
Ga0105068_106778223300009836Groundwater SandPFDRFRAGLHARDRYAVDVPAGAKGPFITRGEVVRAYSAFFFLPAIQVREADRVFHYRFP
Ga0134070_1018410013300010301Grasslands SoilAAGDRLGFDAAAFDAFRAQLQPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR*
Ga0134071_1047792913300010336Grasslands SoilPFDSFRATLRPRERYAVDVPPGFKGPSITRGDVVRAYSAFYFLPAIQVPRARRVFHYRFR
Ga0120114_104447633300011998PermafrostVKLRPRERYAVDVPPGAKGLFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR*
Ga0120163_111293213300012003PermafrostRPRERYAVDVPPGAKGLFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR*
Ga0120161_112557323300012005PermafrostLAAFDAFRVKLRPRERYAVDVPPGAKGLFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR*
Ga0120139_110989313300012019PermafrostFVEGRPPARRQQPISRPKAAGDDAAAFDAFRVKLRPRERYAVDVPPGAKGLFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR*
Ga0137389_1045100213300012096Vadose Zone SoilAAGDRLGLDAAPFDAFRAQLQPRERYAIDVPAGAKGPFITRGAVVRAYAAFYFLPAIQAPQADHVFRYRFK*
Ga0137388_1087203013300012189Vadose Zone SoilLTPAERRHAAGDRLGLDAAPFDALRAQLQPRERYAVDVPAGAKGPFITRGAVVRAYAAFYFLPAIQAPQADHVFRYRFK*
Ga0137364_1133188413300012198Vadose Zone SoilRYAVDVPAGAKGPFITRGAVVRAYAAFYFLPAVQVPRADRVFHYRFR*
Ga0137374_1058526213300012204Vadose Zone SoilPRERYAVDVPAGAKGPFITRGEVVRAYSAFYFLPAIQVRHAALVFRYRFR*
Ga0137374_1085666623300012204Vadose Zone SoilPRERYAVDVPAGAKGPFITRGEVVRAYSAFYFLPAIQVRHAPLVFRYRFR*
Ga0137370_1085821013300012285Vadose Zone SoilGDRLHLRRAPFAAFRPKLQPRERYAVAVPPGPRGPFITRGEVVRAYAAFFFLPAIQVPRAPAVFHYRFR*
Ga0137366_1063648613300012354Vadose Zone SoilAGDRLHLDPAPFDMFRAELLPRQRYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVEQADRVFHYRFR*
Ga0137371_1083458913300012356Vadose Zone SoilAPFDAFRAGLRPRERYAVDVPPGARGPFITRGAVVRAYAAFYFLPAIQVEQADHVFHYRFR*
Ga0157308_1040635523300012910SoilPRERYAVDVPPGEQGPFITRGAVVRAYAAFFFLPAIQVGQAPRVFHYRFR*
Ga0137394_1019764023300012922Vadose Zone SoilLDAEPFDAFRVQLHPRERYAVDVPPGAKGAFITRGAVVRAYAAFYFLPAIQVGQADHVFRYRFR*
Ga0137404_1047502713300012929Vadose Zone SoilTPAERRHAAGDRLGLDPAPFDAFRAELRSRERYAVDVPPGARGPFITRGAVVRAYAAFYFLPAIQVEQADHVFHYRFR*
Ga0164298_1071488413300012955SoilQLRPRERYAVDVPPGSKGPFITRGAVVHAYAAFYFLPAIQVGRADHVFHYWFP*
Ga0134110_1051043513300012975Grasslands SoilTLRPRERYAVDVPPGFKGPSITRGDVVRAYSAFYFLPAIQVPRARRVFHYRFR*
Ga0157373_1031161823300013100Corn RhizosphereFDAFRARLGAKERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRADRVFHYRFR*
Ga0157369_1138799613300013105Corn RhizosphereMLSSAERRHAAGDRLGFDASAFDAFRVRLRPRERYAVDVPPGSKGPFITRGAVVRAYAAFFFLPAIQVRRADHVFRYRFP*
Ga0120179_111215623300013763PermafrostGFDLAPFDAFRAQLRPREQYAVDVPSGARGPFITRGAVVRAYSAFYFLPAIQVPQADHVFHYRFR*
Ga0120173_100121343300014031PermafrostVPARAGIDAFRVQLQPRERYAVDVPPGAKGLFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR*
Ga0120149_108634013300014058PermafrostRRHAAGDRLGFDAAAFDAFRVKLRPRERYAVDVPPGAKGLFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR*
Ga0134081_1036016323300014150Grasslands SoilERYAVDVPPGFKGPSITRGDVVRAYSAFYFLPAIQVPRARRVFHYRFR*
Ga0134078_1028114313300014157Grasslands SoilLDPAPFDAFRAGLLPREPYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAVQVEQADHVFHYRFR*
Ga0184619_1019994613300018061Groundwater SedimentQLRYRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVDQADHVFRYRFR
Ga0184617_101444513300018066Groundwater SedimentARLHAAGDRLGFDPAPFDAFRAQLRPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRADRVFHYRFR
Ga0184618_1012205023300018071Groundwater SedimentGDRLGFDAAAFDAFRVQLRPRERYAVDVPPGAKGPFITRGAVVHAYAAFYFLPAIQVEQANHVFRYRFR
Ga0184609_1051556713300018076Groundwater SedimentKLTPAERRHAAGDRLGLDAAPFDSFRAALQPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR
Ga0184642_153237923300019279Groundwater SedimentRLSFDAAAFDAFRVQLRPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR
Ga0193756_102778723300019866SoilLGFDPAPFDAFRARLGPKWRYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRADRVFHYRFR
Ga0193720_100112813300019868SoilRAQLQPRQRYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVGQADHVFRYRFR
Ga0193700_106933813300019873SoilRAPFDAFRAELHPRERYAVDVPPGPRGPFITRGEVVRAYAAFFFLPAIQVPRAPPVFHYRFR
Ga0193727_100068713300019886SoilERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRADRVFHYRFR
Ga0193728_136314813300019890SoilPREQYAVDVPSGARGPFITRGAVVRAYAAFYFLPAIQVPQADHVFHYRFR
Ga0193730_104577113300020002SoilPFDAFRVELRPRERYAVDVPPGARGPFITRGAVVRAYAAFYFLPAIQVEQADHVFHYRFR
Ga0193721_105168313300020018SoilYAVDVPPGPRGPFITRGEVVRAYAAFFFLPAIQVPRAPPVFHYRFR
Ga0210382_1032128713300021080Groundwater SedimentDRLGFDAAAFDAFRVQLRPRERYAVDVPPGAKGPFITRGAVVHAYAAFYFLPAIQVEQADHVFRYRFR
Ga0210382_1055053523300021080Groundwater SedimentGFDAAPFDAFRVKLQPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVGQADHVFRYRFR
Ga0222621_103056513300021510Groundwater SedimentRAQLRPPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRADRVFHYRFR
Ga0193714_105114213300023058SoilRLQPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVGQADHVFHYRFR
Ga0207643_1085570323300025908Miscanthus RhizosphereRLGFDASAFDAFRVRLRPRERYAVDVPPGSKGPFITRGAVVRAYAAFYFLPAIQVRRADHVFRYRFP
Ga0207707_1110471323300025912Corn RhizosphereRPKELYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRANQVFHYRFR
Ga0207687_1101618123300025927Miscanthus RhizosphereGDRLGFDPVPFDDFRRSLRSRDRYVVDVPEGSRGPFITRGAVVRAYSAFYFLPAIQMRKAERIFRYRFR
Ga0207686_1070664213300025934Miscanthus RhizosphereGFDATPFDAFRARLQPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVEQAYHVFRYRFR
Ga0207683_1143878023300026121Miscanthus RhizospherePAPFDAFRARLRPEELYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRADRVFHYRFR
Ga0209027_112229023300026300Grasslands SoilMPRTSRLARLHRRQRFSVDVPPGGHGQFATRGDVVRAYSAFYFLPAIEVARAPLVFHYRF
Ga0209238_120958713300026301Grasslands SoilREPYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAVQVEQADHVFHYRFR
Ga0209057_120555113300026342SoilDRLGLDPAPFDAFRAELRPRELYAVDVPPGARGPFITRGAVVRAYAAFYFLPAIQVDQANHVFHYRFR
Ga0209159_124012713300026343SoilTLKPRERYAVDVPPGQKGPSITRGDVVRAYSAFYFLPAIQVPLAKRVFHYRFR
Ga0209376_136508113300026540SoilRRHAAGDRLGLDSAPFDAFRAELRPRELYAVDVPPGARGPFITRGAVVRAYAAFYFLPAIQVDQANHVFHYRFR
Ga0209161_1007877613300026548SoilAFRARLHPRQHYAVDVPPGGRGQFATRGAVVRAYSAFYFLPAIEVGRAPLVFRYRFR
Ga0209577_1054076723300026552SoilDAFRATLRPRERYAVDVPPGQQGPSITRGDVVRAYSAFYFLPAIQVPRARRVFHYRFP
Ga0209896_101057123300027006Groundwater SandAFRARLKPRDRYAVDVPPGTKGPFITRGEVVRAYGAFFFLPAVQVRQADPVFRYRSP
Ga0207626_10138713300027465SoilRLLLRPGPFDAFRATLRPRERYAVDVPPGQKGPSITRGGVVRAYSAFYFLPAIQVPRAQRVFHYRFK
Ga0209874_100680243300027577Groundwater SandLHARDRYAVDVPAGAKGPFITRGEVVRAYSAFFFLPAIQVREADRVFHYRFP
Ga0209069_1032051423300027915WatershedsPAPFDAFRARLGPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRADRVFHYRFR
Ga0307291_107565113300028707SoilQPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR
Ga0307311_1001813713300028716SoilRPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR
Ga0307311_1016800613300028716SoilMLTSAERRHAAGDRLGFDAAAFDAFRVQLQPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVEQA
Ga0307301_1018417613300028719SoilARLHTRERYAVDVPPGPRGPFITRGEVVRAYAAFFFLPAIQVPRAPLVFHYRFR
Ga0307317_1017603323300028720SoilFRARLQPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR
Ga0307319_1016724923300028722SoilLQPRERYAVDVPPGARGPFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR
Ga0307319_1031687823300028722SoilFDDFCVKLQPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVGQADHVFRYRFR
Ga0307280_1040157123300028768SoilMLTSAERRHAAGDRLGFDAAAFDAFRVQLQPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR
Ga0307320_1008752313300028771SoilEPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR
Ga0307282_1001753743300028784SoilLTSAERRHAAGDRLGFDAAAFDAFRVQLQPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR
Ga0307282_1002614213300028784SoilDRLGLDGAPFDAFAARLQPRERYAVDVPPGAKGPFITRGAAVRAYAAFYFLPAIQVEQADHVFRYRFR
Ga0307282_1013431213300028784SoilHAAGDRLGLDPAPFDAFRAELRPRERYAVDVPPGARGPFITRGAVVRAYSAFYFLPAIQVERADHVFHYRFR
Ga0307323_1005660113300028787SoilLRPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVEQADHVFRYRFR
Ga0307323_1015236123300028787SoilFRAQLRPPRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRADRVFHYRFR
Ga0307290_1008604923300028791SoilLRAREQYAVDVPPGARGPFITRGAVVRAYAAFYFLPAIQVEQADHVFHYRFR
Ga0307294_1025929513300028810SoilRERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRADRVFHYRFR
Ga0307277_1016509623300028881SoilRGELRPRERYTVDVPPGARGPFITRGAVVRAYAAFYFLPAIQVEQADHVFHYRFR
Ga0307499_1030614223300031184SoilAGDRLGFDPAPFDAFRARLGPKERYAVDVPPGAKGPFITRGAVVRAYAAFYFLPAIQVTRADRVFHYRFR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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