NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F066996

Metagenome Family F066996

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F066996
Family Type Metagenome
Number of Sequences 126
Average Sequence Length 49 residues
Representative Sequence MRSTRRTLPKNVELMPQHQDLGLQLLSRLEAVAQHADEQEADCNHAAMMF
Number of Associated Samples 114
Number of Associated Scaffolds 126

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 10.78 %
% of genes near scaffold ends (potentially truncated) 34.13 %
% of genes from short scaffolds (< 2000 bps) 73.81 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (68.254 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(18.254 % of family members)
Environment Ontology (ENVO) Unclassified
(20.635 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.587 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.59%    β-sheet: 0.00%    Coil/Unstructured: 56.41%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 126 Family Scaffolds
PF00665rve 4.76
PF01042Ribonuc_L-PSP 3.17
PF13683rve_3 3.17
PF05362Lon_C 2.38
PF02190LON_substr_bdg 2.38
PF00873ACR_tran 1.59
PF04392ABC_sub_bind 1.59
PF04632FUSC 1.59
PF01593Amino_oxidase 1.59
PF07885Ion_trans_2 1.59
PF12142PPO1_DWL 1.59
PF06114Peptidase_M78 0.79
PF00072Response_reg 0.79
PF01152Bac_globin 0.79
PF00581Rhodanese 0.79
PF01979Amidohydro_1 0.79
PF04343DUF488 0.79
PF05598DUF772 0.79
PF00155Aminotran_1_2 0.79
PF12625Arabinose_bd 0.79
PF06356DUF1064 0.79
PF15887Peptidase_Mx 0.79
PF00486Trans_reg_C 0.79
PF13565HTH_32 0.79
PF14681UPRTase 0.79
PF00589Phage_integrase 0.79
PF09361Phasin_2 0.79
PF00239Resolvase 0.79
PF05990DUF900 0.79
PF01255Prenyltransf 0.79
PF04116FA_hydroxylase 0.79
PF00884Sulfatase 0.79
PF04545Sigma70_r4 0.79
PF00216Bac_DNA_binding 0.79
PF01263Aldose_epim 0.79
PF02322Cyt_bd_oxida_II 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 126 Family Scaffolds
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 4.76
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 4.76
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 4.76
COG4584TransposaseMobilome: prophages, transposons [X] 4.76
COG0251Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 familyDefense mechanisms [V] 3.17
COG0466ATP-dependent Lon protease, bacterial typePosttranslational modification, protein turnover, chaperones [O] 2.38
COG1067Predicted ATP-dependent proteasePosttranslational modification, protein turnover, chaperones [O] 2.38
COG1750Predicted archaeal serine protease, S18 familyGeneral function prediction only [R] 2.38
COG3480Predicted secreted protein YlbL, contains PDZ domainSignal transduction mechanisms [T] 2.38
COG1289Uncharacterized membrane protein YccCFunction unknown [S] 1.59
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 1.59
COG0020Undecaprenyl pyrophosphate synthaseLipid transport and metabolism [I] 0.79
COG0676D-hexose-6-phosphate mutarotaseCarbohydrate transport and metabolism [G] 0.79
COG0776Bacterial nucleoid DNA-binding protein IHF-alphaReplication, recombination and repair [L] 0.79
COG1294Cytochrome bd-type quinol oxidase, subunit 2Energy production and conversion [C] 0.79
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.79
COG2017Galactose mutarotase or related enzymeCarbohydrate transport and metabolism [G] 0.79
COG2346Truncated hemoglobin YjbIInorganic ion transport and metabolism [P] 0.79
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 0.79
COG3000Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamilyLipid transport and metabolism [I] 0.79
COG3189Uncharacterized conserved protein YeaO, DUF488 familyFunction unknown [S] 0.79
COG4782Esterase/lipase superfamily enzymeGeneral function prediction only [R] 0.79

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms68.25 %
UnclassifiedrootN/A31.75 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_104519154All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii2895Open in IMG/M
3300002245|JGIcombinedJ26739_100360580All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1334Open in IMG/M
3300004152|Ga0062386_100108400All Organisms → cellular organisms → Bacteria2139Open in IMG/M
3300004479|Ga0062595_100967059All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium727Open in IMG/M
3300005171|Ga0066677_10634033All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria603Open in IMG/M
3300005172|Ga0066683_10440745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium800Open in IMG/M
3300005172|Ga0066683_10736634All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium580Open in IMG/M
3300005175|Ga0066673_10309130All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300005178|Ga0066688_10715731Not Available634Open in IMG/M
3300005186|Ga0066676_11111787All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300005332|Ga0066388_101652392All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1131Open in IMG/M
3300005434|Ga0070709_10051701All Organisms → cellular organisms → Bacteria → Proteobacteria2579Open in IMG/M
3300005439|Ga0070711_100457339All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1046Open in IMG/M
3300005552|Ga0066701_10899897All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium524Open in IMG/M
3300005553|Ga0066695_10145142Not Available1476Open in IMG/M
3300005575|Ga0066702_10776685All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium570Open in IMG/M
3300005713|Ga0066905_101808832All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium563Open in IMG/M
3300005937|Ga0081455_10041056All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4074Open in IMG/M
3300006034|Ga0066656_10684636All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria659Open in IMG/M
3300006175|Ga0070712_100192388All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1597Open in IMG/M
3300006797|Ga0066659_11658041All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium538Open in IMG/M
3300007255|Ga0099791_10056389Not Available1764Open in IMG/M
3300009012|Ga0066710_100262548All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2505Open in IMG/M
3300009012|Ga0066710_102927295All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria668Open in IMG/M
3300009089|Ga0099828_10280346All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1498Open in IMG/M
3300009089|Ga0099828_11645661Not Available565Open in IMG/M
3300009090|Ga0099827_10384865All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1197Open in IMG/M
3300009090|Ga0099827_11410519All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium606Open in IMG/M
3300009094|Ga0111539_10429685All Organisms → cellular organisms → Bacteria → Proteobacteria1538Open in IMG/M
3300009137|Ga0066709_101290302All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1071Open in IMG/M
3300009137|Ga0066709_102500561All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300009143|Ga0099792_10309166All Organisms → cellular organisms → Bacteria941Open in IMG/M
3300009147|Ga0114129_10510832All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1568Open in IMG/M
3300009156|Ga0111538_11692899All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium797Open in IMG/M
3300009792|Ga0126374_11227041All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium602Open in IMG/M
3300010043|Ga0126380_11722146Not Available564Open in IMG/M
3300010046|Ga0126384_10190432All Organisms → cellular organisms → Bacteria → Terrabacteria group1615Open in IMG/M
3300010047|Ga0126382_11224972All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300010048|Ga0126373_12521694Not Available573Open in IMG/M
3300010166|Ga0126306_11219066Not Available619Open in IMG/M
3300010335|Ga0134063_10721597All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300010337|Ga0134062_10248356All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300010359|Ga0126376_11312139All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium744Open in IMG/M
3300010359|Ga0126376_12991236All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria522Open in IMG/M
3300010360|Ga0126372_12249660Not Available595Open in IMG/M
3300010361|Ga0126378_12210938Not Available628Open in IMG/M
3300010362|Ga0126377_13322768Not Available520Open in IMG/M
3300010398|Ga0126383_10421495All Organisms → cellular organisms → Bacteria1377Open in IMG/M
3300012199|Ga0137383_10189563All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1507Open in IMG/M
3300012200|Ga0137382_10929639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium626Open in IMG/M
3300012211|Ga0137377_10643963Not Available996Open in IMG/M
3300012285|Ga0137370_10335684All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium907Open in IMG/M
3300012350|Ga0137372_10417466All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1013Open in IMG/M
3300012362|Ga0137361_10224910All Organisms → cellular organisms → Bacteria1703Open in IMG/M
3300012362|Ga0137361_11177022All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium689Open in IMG/M
3300012362|Ga0137361_11392346All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium625Open in IMG/M
3300012582|Ga0137358_10876280All Organisms → cellular organisms → Bacteria → Proteobacteria590Open in IMG/M
3300012685|Ga0137397_10971871All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium626Open in IMG/M
3300012918|Ga0137396_10238325All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1341Open in IMG/M
3300012922|Ga0137394_11046377All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300012972|Ga0134077_10331060Not Available645Open in IMG/M
3300012986|Ga0164304_11020021All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium656Open in IMG/M
3300016319|Ga0182033_10504660All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300016341|Ga0182035_10880382All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria789Open in IMG/M
3300016371|Ga0182034_11650633All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium563Open in IMG/M
3300016404|Ga0182037_11742524All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium556Open in IMG/M
3300017657|Ga0134074_1060824Not Available1280Open in IMG/M
3300018078|Ga0184612_10607159All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales518Open in IMG/M
3300018433|Ga0066667_10215248All Organisms → cellular organisms → Bacteria → Proteobacteria1426Open in IMG/M
3300018468|Ga0066662_12309791All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria565Open in IMG/M
3300018482|Ga0066669_10193644Not Available1548Open in IMG/M
3300018482|Ga0066669_10886450All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria797Open in IMG/M
3300021168|Ga0210406_10130242All Organisms → cellular organisms → Bacteria → Proteobacteria2121Open in IMG/M
3300021478|Ga0210402_10881331All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium821Open in IMG/M
3300021560|Ga0126371_10604467All Organisms → cellular organisms → Bacteria1246Open in IMG/M
3300024288|Ga0179589_10040666Not Available1698Open in IMG/M
3300025915|Ga0207693_11403326All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium518Open in IMG/M
3300025916|Ga0207663_10236038All Organisms → cellular organisms → Bacteria1339Open in IMG/M
3300026308|Ga0209265_1065490All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1087Open in IMG/M
3300026319|Ga0209647_1219803All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium644Open in IMG/M
3300026327|Ga0209266_1156051All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300026508|Ga0257161_1118418Not Available555Open in IMG/M
3300026551|Ga0209648_10821568All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales508Open in IMG/M
3300027070|Ga0208365_1013093All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Thermohalobaculum → Thermohalobaculum xanthum1036Open in IMG/M
3300028710|Ga0307322_10172798All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium582Open in IMG/M
3300031544|Ga0318534_10809647All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium526Open in IMG/M
3300031679|Ga0318561_10062391All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1892Open in IMG/M
3300031751|Ga0318494_10757262All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium569Open in IMG/M
3300031763|Ga0318537_10038901All Organisms → cellular organisms → Bacteria → Proteobacteria1708Open in IMG/M
3300031770|Ga0318521_10832337All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium563Open in IMG/M
3300031890|Ga0306925_11489051All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium663Open in IMG/M
3300031897|Ga0318520_10365595All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium877Open in IMG/M
3300031910|Ga0306923_12115244All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium567Open in IMG/M
3300031912|Ga0306921_12226273All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria577Open in IMG/M
3300031941|Ga0310912_10013631All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium5213Open in IMG/M
3300031945|Ga0310913_10167880All Organisms → cellular organisms → Bacteria1523Open in IMG/M
3300031947|Ga0310909_10112875All Organisms → cellular organisms → Bacteria2198Open in IMG/M
3300032043|Ga0318556_10586874All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium581Open in IMG/M
3300032052|Ga0318506_10074398All Organisms → cellular organisms → Bacteria → Proteobacteria1416Open in IMG/M
3300032054|Ga0318570_10166657All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300032180|Ga0307471_101904914All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria744Open in IMG/M
3300032261|Ga0306920_100231530All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2756Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil18.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil15.08%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil10.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.52%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil7.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.14%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.56%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.17%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.17%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.38%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.38%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.59%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.59%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.59%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.59%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.79%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.79%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.79%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.79%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021444Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026508Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-AEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027070Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)EnvironmentalOpen in IMG/M
3300027521Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10451915463300000955SoilMRSPWRALLQDIELMPQHQDLGFKLLPRLEVVAQHANEQKADCNHAAMMF*
JGIcombinedJ26739_10036058013300002245Forest SoilMRSTWRTLPKNVELMPQHQHLGLQLLSRLEAVAQHANEKEANCNPAAIMF*
Ga0062386_10010840023300004152Bog Forest SoilMRSTWRALPKNIELMPQHQDLGFQLLSRLEAVAQHADEQEADCNHAAIMFRFAADRESIG
Ga0062595_10096705913300004479SoilAQRSLLQHIQLMPQHQNLGFELLTRLEVVAQHADEQEADCNHAAIMF*
Ga0066677_1063403313300005171SoilMRSTWRTRPKNVQLMPQHQDLDLQLLSRLEAVAQHADEQQTNCNHAAIMF*
Ga0066683_1044074533300005172SoilVWRTLPKNVELMSQYQDFGLQPPSRLEAVAQHADEQEADCNHSAIMF*
Ga0066683_1073663413300005172SoilTWRTLPKNVQLMPQHQDLDLQLLSRLEAVAQHADEQQANCNHAAIMF*
Ga0066673_1030913013300005175SoilMRSTRRTLPKNVELMLQHQDLGLQPLSRLEAVAQRTDEQQADCNHAAIMF*
Ga0066688_1071573113300005178SoilMRSTRRTLPKNVELMPQQPLPRLEAVAQRTDEQQADCNHAAIMF*
Ga0066676_1111178723300005186SoilMRSTRRTLPKNIELMPQHQDLGLQPLSRLEAVAQRTDEQQADCNHAAIMF*
Ga0066388_10165239223300005332Tropical Forest SoilMQSTWRALLQHAELMPQDEDFGFQPASRLETVAQHADEQEADCNHSAIMF*
Ga0070709_1005170133300005434Corn, Switchgrass And Miscanthus RhizosphereMSWKNRATSKSWRAPPKNVELMPQHQHLGLHLLSRLEAVAQHADEQQPDCNHAAIMF*
Ga0070711_10045733933300005439Corn, Switchgrass And Miscanthus RhizosphereMQSAWRSLLQDIELMPQYHDLGFHLLSRLEAVAQHADEQEADCNHAAIMF*
Ga0070699_10002586413300005518Corn, Switchgrass And Miscanthus RhizosphereVELMSQYQDFGLQPPSRREAVAQYADEQEADCNHLAIMF*
Ga0070696_10030115843300005546Corn, Switchgrass And Miscanthus RhizosphereVELMSQYQDFGLQPPSRREAVAQYADEQEADCNHTAIMF*
Ga0066701_1089989713300005552SoilGTIGPTQMRSTWRTLPKNVQLMPQHQDLGLQLLSRLEAVAQHADEQQANCNHAAIMF*
Ga0066695_1014514223300005553SoilMRSTWRTLPKNVQLMPQHQDLDLQLLSRLEAVAQHADEQQANCNHAAIMF*
Ga0066702_1077668513300005575SoilPNEQSTIGPTQMQSAWRSLPKNVELMPQHQDLGLQPLSRLEAVAQRTDEQQADCNHAAIMF*
Ga0066905_10180883223300005713Tropical Forest SoilMRWAWRSLLQDIELMPQYHDLDCQLRSRLETVAEHADEREADCNHAAIIF*
Ga0068861_10087231133300005719Switchgrass RhizosphereMPQHQHLGLHLLSRLEAVAQHADEQQPDCNHAAIMF*
Ga0081455_1004105633300005937Tabebuia Heterophylla RhizosphereMLERERSLLQDIELMPQYHDLGFQLRSRLEAVAQHADEQEANCNHAAIMF*
Ga0066656_1068463613300006034SoilMRSTWRTLPKNVQLMPQHQDLGLQLLSRLEAVAQRTDEQQADCNHAAIMF*
Ga0070712_10019238833300006175Corn, Switchgrass And Miscanthus RhizosphereMSWKNRATSKSWRAPPKNVELMPQNQHLGLHLLSRLEAVAQHADEQQPDCNHAAIMF*
Ga0066659_1165804113300006797SoilTIGPTQMRSTRRTLPKNVELMPQQPLPRLEAVAQRTDEQQADCNHAAIMF*
Ga0099791_1005638923300007255Vadose Zone SoilMRSTWRTLPKNVELMPQHQHLGLQLLSRLEAVAQHADEQQSDCNHAAIMF*
Ga0066710_10026254823300009012Grasslands SoilMRSTWRTLPKNVQLMPQHQDLGLQLLSRLEAVAQHADEQQANCNHAAIMF
Ga0066710_10292729513300009012Grasslands SoilMRSTRRTLPKNVELMPQHQDLGLQPLSRLEAVAQRTDEQQADCNHAAIMF
Ga0099829_1128067423300009038Vadose Zone SoilLQDIELLPQDHDFGFQPLSRLEAVAQHADEQEADCNHSAIMF*
Ga0099828_1028034623300009089Vadose Zone SoilMQSATWRALLQDVELMPQYQNFGFQLPSRLEAVAQHADEKEADCNHAAIMF*
Ga0099828_1164566113300009089Vadose Zone SoilQSAIDPPQMRSTWRAVQNIELMPQRQNLGFQLLSRLEAVAQQAEEQEPQRNHAAMMS*
Ga0099827_1038486513300009090Vadose Zone SoilRRALLQDIELMPQDHDFGFQPLSRLEAVAQHADEQEADCNHSAIMF*
Ga0099827_1141051923300009090Vadose Zone SoilMRSTRRTLPKNVELMPQHQDLGLQPLSRLEAVAQRTDEQQADCNHAAIMF*
Ga0111539_1042968523300009094Populus RhizosphereMRSPWRTLLQDVELMPQHQDLGRQLLPRLEVVAQHADEQEGDCNHSAIMF*
Ga0066709_10129030213300009137Grasslands SoilMRSTWRTRPKNVQLMPQHQDLDLQLLSRLEAVAQHADEQQANCNHAAIMF*
Ga0066709_10250056113300009137Grasslands SoilMRSTRRTLPKNVELMPQHQDLGLQPLSRLEAVAQRTDEQQANCNHAAIMF*
Ga0099792_1030916613300009143Vadose Zone SoilMQSTARRTVPKNVELMSQYQDFGLQPPSRLEAVAQYADEKEADCNHAAIMF*
Ga0114129_1051083233300009147Populus RhizosphereMSWKNRATSKSWRAPPKNVELMPQHQDLGLQLLSRLEAVAQHADEQQLDCNHAAIMF*
Ga0111538_1169289913300009156Populus RhizosphereRATSKSWRAPPKNVELMPQHQHLGLHLLSRLEAVAQHADEQQPDCNHAAIMF*
Ga0075423_1318160223300009162Populus RhizosphereSLVQDTELMPQNHDLGFQLLSRLEAVAQHADEQEADCDHAAIMF*
Ga0126374_1122704113300009792Tropical Forest SoilMRSAWRSLLQDIELIPQYHDFDFQLRSRLETVAEHADEQEADCNHAAIMF*
Ga0126380_1172214613300010043Tropical Forest SoilMPSARRSLLQDIELMPQYENLAFQLLPRPEEVEQHAEEQEADCNHAAIMFCFVRDCESNG
Ga0126384_1019043223300010046Tropical Forest SoilMRSAWRSLLQDIELMPQYHDLDFQLRSRLETVAEHADEQEADCNDAAIMF*
Ga0126384_1086421633300010046Tropical Forest SoilMPQHQDLGLRLLSRLEAVAQHADEQEADCDHTAIMF*
Ga0126382_1122497213300010047Tropical Forest SoilIEPNEQSTIGPTQMQSAWRSLLQDIELMPQYHDLGFQLLSRLEAVAQHADEQEADCNHAAIMF*
Ga0126373_1252169413300010048Tropical Forest SoilMRSTWRTPPKNVDLMPQHQHLGLQLLSRLQAVAQHADEQQPDCNHAAIMF*
Ga0126306_1121906613300010166Serpentine SoilMWFAWRSLSQDIELMPQYYDHGFQLLSRPEAIAQHADEQEADSYHAAIMFRFATDRESIGWS
Ga0134063_1072159723300010335Grasslands SoilMRSTWRTLPKNVQLMPQHQDLGLQLLSRLEAVAQHADEQQPDCNHAAIMF*
Ga0134062_1024835613300010337Grasslands SoilMQSAWRSLPKNVELMPQHQDLGLQPLSRLEAVAQRTDEQQADCNHAAIMF
Ga0126376_1131213933300010359Tropical Forest SoilLMPQYQDFGFQPRPRLEEVAQHADEQEADRNHSAIMF*
Ga0126376_1299123623300010359Tropical Forest SoilMRSAWRSLLQDIELIPQYHDLDFQLRSRLETVAEHADEQEADCNHAAIMF*
Ga0126372_1224966023300010360Tropical Forest SoilMGSPARRSLLQHTELMPQHQDLGFQLLSRLEVVAQHADEQKADCHHAAIVF*
Ga0126378_1221093823300010361Tropical Forest SoilMRSTWRTPPKNVELMPQHQHLGLQLLSRLEAVAQHADEQQPDCNHAAIMF*
Ga0126377_1332276823300010362Tropical Forest SoilMRLPWRTLLQDVELMPQHQDLGRQLLSRLKVVAQHADEQEGDCNHSAIMF*
Ga0134126_1089676933300010396Terrestrial SoilELMPQHQHLGLHLLSRLEAVAQHADEQQLDCNHAAIMF*
Ga0126383_1042149513300010398Tropical Forest SoilMRSAWRSLLQDIELMPQYHDLDFQLRSRLETVAEHADEQEADCN
Ga0105246_1251187413300011119Miscanthus RhizosphereMAQDQDFGFQPLLRLEAVAQHTEEQEADCDHSAIMF*
Ga0137383_1018956343300012199Vadose Zone SoilQSVWRSLPQNIQLMPQDQVFGFQPPSRLEAVAHYADEQEPNCNHSAIMF*
Ga0137382_1092963913300012200Vadose Zone SoilWRSLLQDIEVMPQYHDPGFQLLSRLEAVAQHADEQEADCDHAATM*
Ga0137363_1037444223300012202Vadose Zone SoilMPQDQDFGFQLPSRLEAVAQHAGEEVGNCDHAAIMF*
Ga0137376_1091008123300012208Vadose Zone SoilLNQDFGLQPLSRLEVVAQYPNEQEADCNHAAIMF*
Ga0137377_1064396323300012211Vadose Zone SoilMQSTVWRTLPKNVELMSQYQNFGFQPPSRLEAVAHYADEQEPNCNHSAIMF*
Ga0137370_1033568423300012285Vadose Zone SoilMRSTRRTLPKNVELMPQHQDLGLSRLEAVAQRTDEQQADCNHAAIMF*
Ga0137372_1041746623300012350Vadose Zone SoilMQSTVWRTLPKNVELMSQYQGFGLQPPSRLEAVAQYADKQEAGCNHAAIMF*
Ga0137369_1010101643300012355Vadose Zone SoilMPQYQNFGFQAPARLEAIAEYADEQEADCNHAAIMF*
Ga0137361_1022491013300012362Vadose Zone SoilMRSTWRALLQDIELMPQHQDLGFQLLSRLEAIAQHADEQEADCNHSAMMF*
Ga0137361_1117702213300012362Vadose Zone SoilWRSLPKNVELMPQHQDLGLQLLSRLEAVAQHADEQQANCNHAAIMF*
Ga0137361_1139234613300012362Vadose Zone SoilMQSTAWRTVPKNVELMSQYQDFGLQPPSRLEAVAQYADEKEADCNHAAIMF*
Ga0137358_1087628013300012582Vadose Zone SoilMSWKSWATSKSWRAPPKNVELMPQHQDLGFQLLSRPEAVAQHADEQQANCNHAAIM
Ga0137397_1097187123300012685Vadose Zone SoilMRSTWRTLPKNVELMPEHQDLGFQLLSRFEAVAQHADEQEADCNHAAIMF*
Ga0137396_1023832533300012918Vadose Zone SoilPKNVELMPQHQHLGLQLLSRLEAVAQHADEQQSDCNHAAIMF*
Ga0137394_1104637723300012922Vadose Zone SoilMRSPRRALLQDIELMPEHQDLGFQLLSRFEAVAQHADEQEADCNHAAIMF*
Ga0134077_1033106023300012972Grasslands SoilMRSTRRTLPKNVELMPQHQDLGLQLLSRLEAVAQHADEQEADCNHAAMMF*
Ga0164308_1159595313300012985SoilMPQHQDLGFQLLSRLEVGAQHADEQEADCNHAAMMF*
Ga0164304_1102002113300012986SoilMRSPWRALLQDIELMPQHQDLGFQLLSRLEVVAQHADEQEADCNHAAMMF*
Ga0132258_1210326023300015371Arabidopsis RhizosphereMPQHQDLGFQLLSRPEVVAQHADEQQARCNHAAMMF*
Ga0132257_10293869723300015373Arabidopsis RhizosphereELMTQYDELRLQLLSRPEAVAQHADEQEADCNHLAIMI*
Ga0182033_1050466013300016319SoilMWSPWRTLLQDIELMPQNQELGFQLLSRLEAVAQHADEQEADCNHAAIMF
Ga0182035_1038708623300016341SoilMPQDQDFGFQPLWRLETVAQHLEKQEADCDHSAILF
Ga0182035_1088038213300016341SoilPPTRRALLQDVQLMTQDEEFGFQPLWRFETIPQHAEIQEADCNHSAMMF
Ga0182034_1165063313300016371SoilTIDPTQMRSPWRTLLQDIELMPQNQELGFQLLSRLEAVAQHADEQEADCNHAAIMF
Ga0182037_1174252413300016404SoilSTIDPTQMRSPWRTLLQDIELMPQNQELGFQLLSRLEAVAQHADEQEADCNHAAIMF
Ga0134074_106082423300017657Grasslands SoilMRSTWRTLPKNVELMPQHQDLGLSRLEAVAQRTDEQQADCNHAAIMF
Ga0184635_1002661333300018072Groundwater SedimentMPQDQDFGFQQLLRLEAVAQHAEKQEADCNHSAIMF
Ga0184632_1018419013300018075Groundwater SedimentMPQHQDFGFQAPSRPEAVAEYADEQEADCDHAASMI
Ga0184612_1060715923300018078Groundwater SedimentLPTLLKDVDLMSQYQDFGLQPPPRLKAVAQHADEKDADCNHAAIMF
Ga0066667_1021524823300018433Grasslands SoilMSWKSRATSKSWRAPPKNVELMPQHQDLGFQLLSRLEAVAQHADEQEADCNHVAIML
Ga0066662_1230979113300018468Grasslands SoilDEKGTVDPTQMQWPARHSLLQHTELMPQHQDLGFQLLSRLEVIAQHADEQEADCNHAAIM
Ga0066669_1019364423300018482Grasslands SoilMRSTRRTLPKNVELMPQHQDLGLQLLSRLEAVAQRTDEQQADCNHAAIMF
Ga0066669_1088645013300018482Grasslands SoilEPTQTQSTAWRTLPKNVELMPQYQDFGLQPPSRLEAVAQYADEQEADCNHAGIMF
Ga0210406_1013024223300021168SoilMSWKNRATSKSWRAPPKNVELMPQHQHLGLQLLSRLEAVAQHADE
Ga0213878_1005035833300021444Bulk SoilMPQHQDLGCQLLSRLEAVAQHADEQEADCDHTAIMF
Ga0210402_1088133123300021478SoilQMQSTARRTLPKNVELMPQYQDFGLQPPSRLEAVAKYADEQEADCNHAPIMF
Ga0126371_1060446723300021560Tropical Forest SoilMRSTWRTPPKNVELMPQHQLSRLEAVAQHADEQQPDCNHAAIMF
Ga0179589_1004066623300024288Vadose Zone SoilMIGPTQTRSTWRPPPKNVELMPQHQDLGFQLLSRPEAVAQHADEQEADCNHAAMMF
Ga0207693_1140332613300025915Corn, Switchgrass And Miscanthus RhizosphereSPAQRSQLQHIQLMPQHQNLGFELLTRLEVVAQHADEQEADCNHAAIMF
Ga0207663_1023603823300025916Corn, Switchgrass And Miscanthus RhizosphereMRSTWRTLPKNVELMPQHQHLGLQLLSRLEAVAQHADEQQPDCNQAAIMF
Ga0209265_106549033300026308SoilIGPTQMRSTWRTRPKNVQLMPQHQDLDLQLLSRLEAVAQHADEQQANCNHAAIMF
Ga0209647_121980313300026319Grasslands SoilDPTQMQSTAWRTVPKNVELMSQYQDFGLQPPSRLEAVAQYADEKEADCNHAAIMF
Ga0209266_115605123300026327SoilMRSTWRTLPKNVQLMPQHQDLDLQLLSRLEAVAQHADEQQANCNHAAIMF
Ga0257161_111841813300026508SoilMRSTWRTPPKNVELMPQHQHLGLQLLSRLEAVAQHADEQQPDCNHAAIMF
Ga0209648_1082156813300026551Grasslands SoilPFTPSPTFAHSSLLQHVELMPQYQDFGFQSPSRLEAIAQHADEKEADCNHAAIMF
Ga0208365_101309323300027070Forest SoilATIEPDEQSAVDPTQMRSTSRAPLQNIELMPQRQNLGFQLPSRLEAVVQQAEEQKHQRNHAAMMF
Ga0209524_104145013300027521Forest SoilMPQHQDFGFQLLSRLEEVAQHADEQEAHCKHAAIMF
Ga0307322_1017279813300028710SoilQMRSTLRTPPKNVELMPQHQHLGLQLLSRLEAVAQHADEQQPDCNHAAIMF
Ga0318516_1020815633300031543SoilMPQHQDLGFQLPSRLEAVAQHADEQEDDCNHAAMMF
Ga0318534_1080964723300031544SoilMRSRWRTPPENIELMPQHQDLGFQLPSRLEAVAQHADEQEDDCNHAAMMF
Ga0318561_1006239133300031679SoilVLLAPASTIDPTQMRSPWRTLLQDIELMPQNQELGFQLLSRLEAVAQHADEQEADCNHAAIMF
Ga0307468_10056823523300031740Hardwood Forest SoilMSQYQDFGLQPLSRLEAVAQYPDEQEADYNHAAIMF
Ga0318494_1075726213300031751SoilSTIGPTQMQSPAQRSLLQHTELMPQHQDLGFQLLSRLEVVAQHADEQEADCHHAAIVF
Ga0318537_1003890133300031763SoilIGPAQMRSRWRTPPENIELMPQHQDLGFQLPSRLEAVAQHADEQEDDCNHAAMMF
Ga0318521_1083233723300031770SoilIDPTQMWSPWRTLLQDIELMPQNQELGFQLLSRLEAVAQHADEQEADCNHAAIMF
Ga0318517_1030853613300031835SoilIELMPQHQDLGFQLPSRLEAVAQHADEQEDDCNHAAMMF
Ga0306925_1148905123300031890SoilPTQMQSPAPRSLLQHTELMPQHQDLGFQLLSRLEVAAQHADEQEADCHHAAIVF
Ga0318520_1036559513300031897SoilMRSPWRTLLQDIELMPQNQELGFQLLSRLEAVAQHADEQEADCNHAAIMF
Ga0306923_1211524413300031910SoilNEQGTVGPTQMQSMRCALLQNIELMPQDDDLGFQLPSRLEVVAQHADEQETDCDHAAIMF
Ga0306921_1222627313300031912SoilMRSTWRTPPKNVELMPQHQHLGLQLLSRLEAVAQHADEQQSDCNHAAIMF
Ga0310912_1001363113300031941SoilSAWRSLLQDIELMPQYHALGFQLLSRLEAVAQHADEQEADCNHAAIMF
Ga0310916_1090840923300031942SoilMPQHQDLGFQLLSRLEAVAQHADEQEADCDHAAIMF
Ga0310913_1016788043300031945SoilQMQSPARRSLLQHTELMPQHQDLGFQLLSRLEVVAQHAHEQEADCHHAAIVF
Ga0310913_1023939633300031945SoilVQNIELMPQRQNLGFQLPSRLEAVVQQAEEQEPQRNHAR
Ga0310909_1011287513300031947SoilIGPTQMQSPARRSLLQHTELMPQHQDLGFQLLSRLEVVAQHADEQEADCHHAAIVF
Ga0318556_1058687413300032043SoilLAHGAVLLAPASTIDPTQMRSPWRTLLQDIELMPQNQELGFQLLSRLEAVAQHADEQEADCNHAAIMF
Ga0318506_1007439823300032052SoilMRSRWRTPPENIELMPQHQDLGFQLPSRLEAVAQHADEQEDYCNHAAMMF
Ga0318570_1016665723300032054SoilMRSPWRTLLQDIELMPHNQELGFQLLSRLEAVAQHADEQEADCNHAAIMF
Ga0307471_10190491423300032180Hardwood Forest SoilMPQHQDLGFQLLSRLEAIAQHADEQEADCNHSAMMF
Ga0306920_10023153053300032261SoilPNEQSTIGPTQMRSAWRSLLQDIELMPQYHALGFQLLSRLEAVAQHADEQEADCNHAAIM

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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