Metagenome / Metatranscriptome Family F067066

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067066
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	57 residues
Representative Sequence	HHFDMDDAFCARMRAAIAAGLESAPIGVVTTPGTKNPKYVPTEPWLLSSSLGDMDF
Number of Associated Samples	79
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.65 %
% of genes near scaffold ends (potentially truncated)	69.84 %
% of genes from short scaffolds (< 2000 bps)	88.10 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (79.365 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.714 % of family members)
Environment Ontology (ENVO)	Unclassified (56.349 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.556 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.29% β-sheet: 0.00% Coil/Unstructured: 85.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF04226	Transgly_assoc	6.35
PF00583	Acetyltransf_1	3.97
PF06411	HdeA	3.97
PF00027	cNMP_binding	2.38
PF11272	DUF3072	1.59
PF00839	Cys_rich_FGFR	0.79
PF03457	HA	0.79
PF00313	CSD	0.79
PF02627	CMD	0.79
PF01075	Glyco_transf_9	0.79
PF07045	DUF1330	0.79
PF11154	DUF2934	0.79
PF03237	Terminase_6N	0.79
PF13202	EF-hand_5	0.79
PF00856	SET	0.79
PF13499	EF-hand_7	0.79
PF04519	Bactofilin	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	6.35
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.79
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.79
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.79
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.37 %
All Organisms	root	All Organisms	20.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.37 %
cellular organisms	root	All Organisms → cellular organisms	20.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.37 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.37 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.35 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.37 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.38 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.17 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.79 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.17 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.79 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.17 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.79 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.17 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.79 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10029876	Not Available	1473	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10151756	Not Available	557	Open in IMG/M
3300005332\|Ga0066388_101591088	Not Available	1149	Open in IMG/M
3300005332\|Ga0066388_104057461	Not Available	747	Open in IMG/M
3300005332\|Ga0066388_104104230	Not Available	742	Open in IMG/M
3300005332\|Ga0066388_105017822	Not Available	672	Open in IMG/M
3300005332\|Ga0066388_106182927	Not Available	604	Open in IMG/M
3300005713\|Ga0066905_100614737	Not Available	922	Open in IMG/M
3300005764\|Ga0066903_100748311	All Organisms → cellular organisms → Bacteria → Proteobacteria	1735	Open in IMG/M
3300005764\|Ga0066903_101824953	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300005764\|Ga0066903_104354928	Not Available	756	Open in IMG/M
3300005764\|Ga0066903_105331306	Not Available	679	Open in IMG/M
3300005764\|Ga0066903_108890128	Not Available	509	Open in IMG/M
3300005764\|Ga0066903_108918350	Not Available	508	Open in IMG/M
3300006172\|Ga0075018_10830583	Not Available	509	Open in IMG/M
3300006175\|Ga0070712_101977713	Not Available	510	Open in IMG/M
3300009792\|Ga0126374_10373791	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300010046\|Ga0126384_10475062	Not Available	1072	Open in IMG/M
3300010048\|Ga0126373_13220474	Not Available	508	Open in IMG/M
3300010154\|Ga0127503_10281586	Not Available	1330	Open in IMG/M
3300010162\|Ga0131853_11264196	Not Available	548	Open in IMG/M
3300010358\|Ga0126370_12578257	Not Available	508	Open in IMG/M
3300010361\|Ga0126378_10086409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3055	Open in IMG/M
3300010361\|Ga0126378_10535151	Not Available	1287	Open in IMG/M
3300010361\|Ga0126378_11407433	Not Available	790	Open in IMG/M
3300010362\|Ga0126377_12609459	Not Available	581	Open in IMG/M
3300010376\|Ga0126381_101375095	Not Available	1020	Open in IMG/M
3300010376\|Ga0126381_101700764	Not Available	911	Open in IMG/M
3300010376\|Ga0126381_104408565	Not Available	544	Open in IMG/M
3300010376\|Ga0126381_104852746	Not Available	517	Open in IMG/M
3300012198\|Ga0137364_10045259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2905	Open in IMG/M
3300012948\|Ga0126375_10428278	Not Available	965	Open in IMG/M
3300012971\|Ga0126369_10212347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1875	Open in IMG/M
3300012971\|Ga0126369_10484692	Not Available	1292	Open in IMG/M
3300012971\|Ga0126369_13696528	Not Available	501	Open in IMG/M
3300016270\|Ga0182036_10318898	Not Available	1188	Open in IMG/M
3300016270\|Ga0182036_11605843	Not Available	548	Open in IMG/M
3300016294\|Ga0182041_11237069	Not Available	682	Open in IMG/M
3300016294\|Ga0182041_11700027	Not Available	584	Open in IMG/M
3300016341\|Ga0182035_10697080	Not Available	884	Open in IMG/M
3300016341\|Ga0182035_11593301	Not Available	589	Open in IMG/M
3300016357\|Ga0182032_10398869	Not Available	1112	Open in IMG/M
3300016357\|Ga0182032_11130710	Not Available	672	Open in IMG/M
3300016357\|Ga0182032_11267236	Not Available	636	Open in IMG/M
3300016357\|Ga0182032_11851474	Not Available	528	Open in IMG/M
3300016387\|Ga0182040_10380916	Not Available	1102	Open in IMG/M
3300016404\|Ga0182037_11310584	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300017822\|Ga0187802_10074670	Not Available	1259	Open in IMG/M
3300017970\|Ga0187783_10522897	Not Available	860	Open in IMG/M
3300018006\|Ga0187804_10113745	Not Available	1120	Open in IMG/M
3300020150\|Ga0187768_1025068	Not Available	1286	Open in IMG/M
3300021420\|Ga0210394_11758201	Not Available	518	Open in IMG/M
3300021560\|Ga0126371_10956803	Not Available	999	Open in IMG/M
3300021560\|Ga0126371_11212020	Not Available	891	Open in IMG/M
3300021560\|Ga0126371_11263220	Not Available	873	Open in IMG/M
3300021560\|Ga0126371_11724479	Not Available	750	Open in IMG/M
3300027014\|Ga0207815_1028200	Not Available	685	Open in IMG/M
3300027680\|Ga0207826_1108887	Not Available	761	Open in IMG/M
3300030916\|Ga0075386_12030328	Not Available	562	Open in IMG/M
3300030967\|Ga0075399_11355440	Not Available	600	Open in IMG/M
3300031057\|Ga0170834_111417530	Not Available	1088	Open in IMG/M
3300031128\|Ga0170823_10048055	Not Available	594	Open in IMG/M
3300031231\|Ga0170824_103188514	Not Available	630	Open in IMG/M
3300031231\|Ga0170824_108607683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300031469\|Ga0170819_17256217	Not Available	501	Open in IMG/M
3300031543\|Ga0318516_10187877	Not Available	1191	Open in IMG/M
3300031543\|Ga0318516_10520542	Not Available	682	Open in IMG/M
3300031543\|Ga0318516_10807363	Not Available	530	Open in IMG/M
3300031545\|Ga0318541_10466256	Not Available	706	Open in IMG/M
3300031564\|Ga0318573_10117457	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300031573\|Ga0310915_10803657	Not Available	661	Open in IMG/M
3300031640\|Ga0318555_10028742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2688	Open in IMG/M
3300031668\|Ga0318542_10225002	Not Available	950	Open in IMG/M
3300031668\|Ga0318542_10459324	Not Available	660	Open in IMG/M
3300031681\|Ga0318572_10161003	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300031681\|Ga0318572_10683360	Not Available	611	Open in IMG/M
3300031719\|Ga0306917_10091603	Not Available	2161	Open in IMG/M
3300031719\|Ga0306917_10139123	Not Available	1790	Open in IMG/M
3300031719\|Ga0306917_10179112	Not Available	1592	Open in IMG/M
3300031719\|Ga0306917_10518810	Not Available	936	Open in IMG/M
3300031747\|Ga0318502_10035869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2539	Open in IMG/M
3300031748\|Ga0318492_10105622	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300031768\|Ga0318509_10088745	Not Available	1651	Open in IMG/M
3300031768\|Ga0318509_10777096	Not Available	530	Open in IMG/M
3300031770\|Ga0318521_10023584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2913	Open in IMG/M
3300031770\|Ga0318521_10356272	Not Available	868	Open in IMG/M
3300031771\|Ga0318546_10470942	Not Available	880	Open in IMG/M
3300031777\|Ga0318543_10017685	All Organisms → cellular organisms → Bacteria	2621	Open in IMG/M
3300031780\|Ga0318508_1193627	Not Available	582	Open in IMG/M
3300031796\|Ga0318576_10277371	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300031819\|Ga0318568_10221076	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300031821\|Ga0318567_10367586	Not Available	814	Open in IMG/M
3300031833\|Ga0310917_10189361	Not Available	1372	Open in IMG/M
3300031859\|Ga0318527_10018305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2453	Open in IMG/M
3300031879\|Ga0306919_10113412	All Organisms → cellular organisms → Bacteria → Proteobacteria	1928	Open in IMG/M
3300031890\|Ga0306925_11902557	Not Available	565	Open in IMG/M
3300031893\|Ga0318536_10384020	Not Available	710	Open in IMG/M
3300031896\|Ga0318551_10331109	Not Available	860	Open in IMG/M
3300031910\|Ga0306923_10205949	Not Available	2249	Open in IMG/M
3300031912\|Ga0306921_10127445	All Organisms → cellular organisms → Bacteria	2969	Open in IMG/M
3300031912\|Ga0306921_12134823	Not Available	592	Open in IMG/M
3300031942\|Ga0310916_10014556	Not Available	5375	Open in IMG/M
3300031942\|Ga0310916_10245034	Not Available	1509	Open in IMG/M
3300031945\|Ga0310913_10673620	Not Available	732	Open in IMG/M
3300031946\|Ga0310910_10067829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2567	Open in IMG/M
3300031946\|Ga0310910_10247165	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300032001\|Ga0306922_10537421	Not Available	1243	Open in IMG/M
3300032001\|Ga0306922_11881747	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300032041\|Ga0318549_10208990	Not Available	877	Open in IMG/M
3300032044\|Ga0318558_10503855	Not Available	604	Open in IMG/M
3300032052\|Ga0318506_10393625	Not Available	614	Open in IMG/M
3300032052\|Ga0318506_10545070	Not Available	514	Open in IMG/M
3300032059\|Ga0318533_10067530	Not Available	2415	Open in IMG/M
3300032063\|Ga0318504_10110127	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300032064\|Ga0318510_10081940	Not Available	1200	Open in IMG/M
3300032064\|Ga0318510_10381378	Not Available	598	Open in IMG/M
3300032066\|Ga0318514_10142549	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300032076\|Ga0306924_10261534	Not Available	1987	Open in IMG/M
3300032076\|Ga0306924_11590880	Not Available	689	Open in IMG/M
3300032205\|Ga0307472_100694301	Not Available	914	Open in IMG/M
3300032261\|Ga0306920_101139577	Not Available	1129	Open in IMG/M
3300032261\|Ga0306920_102511700	Not Available	708	Open in IMG/M
3300032261\|Ga0306920_104294555	Not Available	512	Open in IMG/M
3300033290\|Ga0318519_10087488	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.21%
Host-Associated	Host-Associated	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.03%
Aquatic	Environmental → Aquatic	3.17%
Arthropoda	Host-Associated → Arthropoda	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.03%
Freshwater	Environmental → Aquatic → Freshwater	2.38%
Sediment	Environmental → Aquatic → Sediment	0.79%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.54%
Loam	Environmental → Terrestrial → Soil → Loam	11.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.59%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.11%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.79%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.59%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100298763	3300000597	Forest Soil	MDDAFCARMRKAIVAGLESAPIGIVTTPGTQTPKCIPAEPRPPASSFGDF*
AF_2010_repII_A1DRAFT_101517562	3300000597	Forest Soil	HVTYASHVDMDDAFCARMRMAIDAGLESVPVGVITTPGTKNPKYVAAEPRLPASPSGNTNF*
Ga0066388_1015910882	3300005332	Tropical Forest Soil	MSDDEIHGTYFAMNDAFCSRMRKAIAAGLESARIGVITTPGTQNPKYVPTEHWPLSSSSGDMNY*
Ga0066388_1040574612	3300005332	Tropical Forest Soil	SVRPSAPRMDEAFCARMRAAIEAGLERAPTGVITTPGTQNPKYVRAEPPWPLLSSLRDTDF*
Ga0066388_1041042301	3300005332	Tropical Forest Soil	MDEAFCACMRIAIAAGLESVPIGVITTPGTKKPKYVLAEPPWPLASSLVNMDF*
Ga0066388_1050178223	3300005332	Tropical Forest Soil	AFCACMRIAIAAGLENAPTGVITTPGTQNPKYVPTENWPLASSPLGDVDF*
Ga0066388_1061829272	3300005332	Tropical Forest Soil	SHFNMDAAFCARMRAAIELGLESAPVGVITTPGTKNPKYVPTEHYSPSCSSANMDF*
Ga0066905_1006147372	3300005713	Tropical Forest Soil	MDAAFRARMYAAITAGLESAPTGIVTTPGTQSPKYVPTEHLWQPQVSPLVDMDF*
Ga0066903_1007483114	3300005764	Tropical Forest Soil	FAMDNAFCARMRRAIAAGLECAPIGVITTPGTQNPKYVPIENWPPGSSSLSDMDF*
Ga0066903_1018249533	3300005764	Tropical Forest Soil	SHVDMDDAFCARMRIAIDAGLESAPVGVITTPGTKNPKYVSTEPWPLGSSSSDFDF*
Ga0066903_1043549283	3300005764	Tropical Forest Soil	LSNGGQTHFDMDEAFCARMREAIEAGLEKAPIGVVTTPGTKKPKYVAAAQPPGPLVSSLVDIDV*
Ga0066903_1053313062	3300005764	Tropical Forest Soil	MDENRSRHHFDMDDAFCARMRWAIAAGLESAPIGVITTPGTKNPKYAPTEHLSPSCSSANMDF*
Ga0066903_1088901281	3300005764	Tropical Forest Soil	MDEAFCARMRIAIAAGLESASIGVVTTPGTKNPKYVPTELPPLASSLSDKDFA*
Ga0066903_1089183501	3300005764	Tropical Forest Soil	MDDENRSRHHFDMDDAFCARMRAAIAAGLESAPIGVVTTPGTKKPKHIPTEKPGPLASSWAI*
Ga0075018_108305831	3300006172	Watersheds	MDDEIQSRHHFDMDDAFCARMRAAIAAGLESAPIGVVTTPGTKNPKYVPTEPWLLSSSLGDMDF*
Ga0070712_1019777132	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TNGGPSHFQMDEAFCARMRRAIEAGLESAPIGIVTTPGTKNPKYVPTKHPRPLVSSLVDMDV*
Ga0126374_103737911	3300009792	Tropical Forest Soil	YASHLDMDDAFCASMRIAIAAGLESAPVGVITTPGTKNPKYVPTEHWPSSSSSGDMNF*
Ga0126384_104750622	3300010046	Tropical Forest Soil	MDAAFCARMRAAVEAGLERAPIGVITTPGTNNPKYVPTEHLWPQVSPLVDMDF*
Ga0126373_102933801	3300010048	Tropical Forest Soil	MDEAFCSRMCAAIAAGLESAPIGVITTPGTKNPKYVRTELLPLASSLSDKDFV*
Ga0126373_132204741	3300010048	Tropical Forest Soil	MSDDHSQLTNGAYLEMDDAFCIRMRKAIFAGLESAPIGVITTPGTKNPKYVPTDVWPFSSSSGNMNF*
Ga0127503_102815862	3300010154	Soil	RHHFDMDDAFCARMRAAIAAGLESAPIDVVTTPGTKNPKYVPTEPWLLASSLGDMDF*
Ga0131853_112641962	3300010162	Termite Gut	DMDDAFCARMHAAIAAGLENAPIGVVSTPGTKSPKYVSTELRPLASSLSDKDFV*
Ga0126370_125782571	3300010358	Tropical Forest Soil	ASHMDMDEAFCACMRIAIAAGLENAPIGVITTPGTKNPKYAPTEHLSPSCSSANMDF*
Ga0126378_100864097	3300010361	Tropical Forest Soil	DMDAAFRARLRIAIAAGLETASIGVVTMPGTKNPIYVPTELPPLASSLSDRDFA*
Ga0126378_105351512	3300010361	Tropical Forest Soil	MDDEIQSPLKSAYFAMDHAFCARMRRAIVAGLESAPIGVITTPGTKSPKYVPTEVWLLTSSSLSDMDF*
Ga0126378_114074331	3300010361	Tropical Forest Soil	GKASYLDMDAAFRARMYAAIAAGLESAPTGLVTTPGTPSPKYVPTEHLWQPQVSPLVDINF*
Ga0126377_126094591	3300010362	Tropical Forest Soil	SYLDMDAAFRARMYAAITAGLESAPTGIVTTPGTQSPKYFPTEHLWQPQVSPLVDMDF*
Ga0126381_1013750952	3300010376	Tropical Forest Soil	MDDAFCACMRKAIFGGLENAPIGVVTEPGTKNPKYVPIEHHWPQVSPLVDMDF*
Ga0126381_1017007641	3300010376	Tropical Forest Soil	MDDEIQSPLKSAYFAMDHAFCARTRRAIVAGLESAPIGVITTPGTKSPKYVPTEVWLLTSSSLSDMDF*
Ga0126381_1044085652	3300010376	Tropical Forest Soil	MDAAFRARMYAAITAGLESAPTGIVTTPGTQSPKYVPTEHLWQPQVSPL
Ga0126381_1048527462	3300010376	Tropical Forest Soil	MSDDDEVRSLLANVYLAMDDAFCARMRRAIFAGLESAPIGVITTPGTRNPKYVPTEVWLPASSSLSDMDFYYGKD*
Ga0137364_100452592	3300012198	Vadose Zone Soil	MDDEIQSRHHFDMDDAFCARMRAAIAAGLESAPIGVVTTPGTKNPKYVPTEPWLLASSLGDMDF*
Ga0126375_104282781	3300012948	Tropical Forest Soil	MDAAFCARMRIAIEAGLENAPIGVITTPGTQSPKYVPIEHLWPQVSPLVDMDF*
Ga0126369_102123471	3300012971	Tropical Forest Soil	SYWDMDDAFCARMLWAIAAGLESAPIGVITTPGTQHPKYVPAAQPPHPLVSSLVDMDV*
Ga0126369_104846921	3300012971	Tropical Forest Soil	MDDAFCACMRKAIFAGLENAPIGVVTAPGTKNPKYVPIEHHWPQVSPLVDMDF*
Ga0126369_136965281	3300012971	Tropical Forest Soil	MDEAFCARMREAIEAGLEKAPIGVVTTPGTKKPKYVAAAQPPGPLVSSLVDIDV*
Ga0182036_103188982	3300016270	Soil	CARMRWALAAGLESAPIGVVTTPGTQNPKYVLAEYLWPQVSPLVDIDF
Ga0182036_116058431	3300016270	Soil	QWRFLDMDDAFCARMRAAIEAGLESAPVGVVTTPGTQNPKYIATEPWLLGSSSGDFDF
Ga0182041_112370694	3300016294	Soil	AITAGLESAPIGVITTPGTQYPKYVPTEHLWPQVSPLVDIDF
Ga0182041_117000272	3300016294	Soil	DMDVAFCARMRWALAAGLESAPIGVVTTPGTEKPKYVRAELWPLTSSSANMDF
Ga0182035_106970801	3300016341	Soil	ATHLDMDDAFCACMRAAIAAGLESAPIGVVTTPGTKKPKYLPTEPRLLGFSLVEMDV
Ga0182035_115933011	3300016341	Soil	FVMDDEIQWRFLDMDDAFCARMRAAIEAGLESAPVGVVTTPGTQNPKYIATEPWLLGSSSGDFDF
Ga0182032_103988693	3300016357	Soil	MDDEIRSLHYFDMDAAFCARMRAAIARGLESAPIGVVTTPGTEKPKYVRAELRPLTSSSANM
Ga0182032_111307101	3300016357	Soil	MDDEIQRRFLDMDDAFCARMRAAIEAGLESAPVGVVTTPGTQNPKYVPAAQPPRPLVSSLVDMDV
Ga0182032_112672361	3300016357	Soil	DAFCSRMRMAIAAGLENAPIGVITTPGTQHPKYVPAAQPPRPLVSSLVDMMDV
Ga0182032_118514741	3300016357	Soil	ETHLHVRYASHWDMDDAFCARMRAAIAAGLESAPIGVVTTPGTKNPRQVPAEARPLGFSSDDMDY
Ga0182040_103809163	3300016387	Soil	MDDEIRSLHYFDMDAAFCARMRWALAAGLESAPIGVVTTPGTEKPKYVRAELRPLTSSS
Ga0182037_113105841	3300016404	Soil	SHENRMDDAFCARLRAAIEAGLESAPIGVVTTPGTQSPKYVSTEHLWPQVSPLADIDF
Ga0182037_120370071	3300016404	Soil	FCACMRIAIAAGLENAPTGIITTPGTKKPKYVLAEPPWPLASSSLGDLLV
Ga0187802_100746703	3300017822	Freshwater Sediment	MDDEIQSRHHFDMDDAFCARMRAAIAAGLECAPIGVITTPGTKNPRYIPTEPWPLGSSLGDMDF
Ga0187783_105228972	3300017970	Tropical Peatland	AYGSLTHFKMDEAFCARMRAAIAAGLESAPIGVITTPGTKKPKYVPADHLALVSAQASAD
Ga0187804_101137451	3300018006	Freshwater Sediment	DMDEAFCACMRIAIAAGLENAPTGIITTPGTKNPKYVPTEPPWPLTSPLVDMDF
Ga0187768_10250683	3300020150	Tropical Peatland	TYASHWDMDEAFCGRMRAAIAAGLENAPIGVITTPGTKNPKYIPTEPRPLAFSLSDKEFV
Ga0210394_117582012	3300021420	Soil	MDAAFCARMRAAIAAGLESAPVGVITTPGTKKPKYVPAEALPLGFSLGAMDF
Ga0126371_109568031	3300021560	Tropical Forest Soil	LDMDEAFCARMRMAIDAGLENAPIGVITRPGTQSPRYVPTEHLGLQVSPLVDMDF
Ga0126371_112120201	3300021560	Tropical Forest Soil	AFCACMRIAIAAGLESVPIGIITTPGTKKPKYVLAEPPWPLASSLGGIDL
Ga0126371_112632201	3300021560	Tropical Forest Soil	TYFAMDDAFCARMRAAIAAGLESTPIGIVTTPGTQTPKYVPPEPRLPTSSLGDF
Ga0126371_117244794	3300021560	Tropical Forest Soil	YFDMDEAFCARMLEAIEAGLESAPIGVVTTPGTKNPKYVPTKHPRPLVSPLVDMDV
Ga0207815_10282001	3300027014	Tropical Forest Soil	SLHYFDMDAAFCARMRAAIARGLESAPIGVVTTPGTEKPKYVRAELRPLTSSSANMDF
Ga0207826_11088871	3300027680	Tropical Forest Soil	ASHFDMDDAFCARMRKAIFPGQESAPIGVVTTPGTKKPRYVRAERPRPLASSSLADMNF
Ga0075386_120303282	3300030916	Soil	MDDEIQSRHHFDMDDAFCARMRAAIAAGLESAPIGVVTTPGTKNPKYVPTEPWLLSSSLGDMDF
Ga0075399_113554403	3300030967	Soil	HHFDMDDAFCARMRAAIAAGLESAPIGVVTTPGTKNPKYVPTEPWLLSSSLGDMDF
Ga0170834_1114175302	3300031057	Forest Soil	MDDETQSRHHFDMNDAFCARMRMAIAAGLESAPIGVVTAPGTKNPKYVPTEPWLLSSSLGDMDF
Ga0170823_100480551	3300031128	Forest Soil	MDDEIRSRHHFEMDDAFCARMRAAIAAGLECAPIGVITAPGTKNPKYVPTEPSPLASSLGGMEEF
Ga0170824_1031885141	3300031231	Forest Soil	PSCPSSSISSDDMDDEIRSRHHFEMDDAFCARMRAAIAAGLECAPIGVITAPGTKNPKYVPTEPSPLASSLGGMEEF
Ga0170824_1086076831	3300031231	Forest Soil	MDDDQSRHHFDMDDAFCARMRKAIAAGLESAPIGVVTTPGTKNPKYVPTEPWLLSSSLGDMYF
Ga0170819_172562171	3300031469	Forest Soil	MDDEIQSRHHFDMDDAFCARMRAAIAAGLESAPIGVVTTPGTKNPKYVPTEPWLLASSLGDMDF
Ga0318516_101878771	3300031543	Soil	RMRWALAAGLESAPIGVVTTPGTQNPKYVLAEYLWPQVSPLVDIDF
Ga0318516_105205421	3300031543	Soil	MDDEIQWRFLDMDDAFCARMRAAIEAGLESAPVGVVTTPGTQNPKYIATEPWLLGSSSGDFDF
Ga0318516_108073632	3300031543	Soil	TNRMDEAFCARMRAAIEAGLESAPIGVITTPGTKNPKHVPTDLRPLASSLSDKDFV
Ga0318541_104662561	3300031545	Soil	MDDEIQWRFLDMDDAFCARMRAAIEAGLESAPVGVVTTPGTQNPKYVPAAQPPRPLVSSLVDMDV
Ga0318573_101174571	3300031564	Soil	ESAPIGVVTTPGTQNPKYVLAEHLWPQVSPLVDIDF
Ga0310915_108036572	3300031573	Soil	FVMDDEIQWRFLDMDDAFCARMRAAIEAGLESAPVGVVTTPGTQNPKYVPAAQPPRPLVSSLVDMDV
Ga0318555_100287425	3300031640	Soil	DMDDAFCSRMRMAIAAGLENAPIGVITTPGTQHPKYVPAAQPPHPLVSSLVDMDF
Ga0318542_102250022	3300031668	Soil	AFCARMRWALAAGLESAPIGVVTTPGTQNPKYVLAEYLWPQVSPLVDIDF
Ga0318542_104593241	3300031668	Soil	DVAFCARMRWALAAGLESAPIGVVTTPGTQNPKYVLAEHLWPQVSPLADIDF
Ga0318572_101610033	3300031681	Soil	DDAFCSRMRLALAAGLESAPIGVVTTPGTQNPKYVLAEHLWPQVSPLVDIDF
Ga0318572_106833602	3300031681	Soil	AYASHFDMDVAFCARMRAAIAAGLESAPIGVITTPGTKNPKYVPTEHWSPSCSSGNMDF
Ga0306917_100916031	3300031719	Soil	WDMDDAFCSRMRMAIAAGLENAPIGVITTPGTQHPKYVPAAQPPHPLVSSLVDMDF
Ga0306917_101391232	3300031719	Soil	MDDEIRSLHYFDMDAAFCARMRAAIARGLESAPIGVVTTPGTEKPKYVRAELRPLTSSSANMDF
Ga0306917_101791121	3300031719	Soil	WDMDVAFCARMRWALAAGLESAPIGVVTTPGTEKPKYVRAELWPLTSSSANMDF
Ga0306917_105188101	3300031719	Soil	MSDDDEPSHFLMDEAFCARMRMAIEAGLESAPIGVVTTHGTKNPKYVPTEPRLLGFSPVEMDV
Ga0318502_100358695	3300031747	Soil	CDRMRLAITAGLESAPIGVITTPGTQNPKYAPTEHFCPQASPLVDMDF
Ga0318492_101056221	3300031748	Soil	DDAFCSRMRWALAAGLESAPIGVVTTPGTQNPKYVLAEHLWPQVSPLVDIDF
Ga0318509_100887451	3300031768	Soil	HATYASHFDMDVAFCARMRWALAAGLESAPIGVVTTPGTQNPKYVLAEHLWPQVSPLADIDF
Ga0318509_107770961	3300031768	Soil	RWALAAGLESAPIGVVTTPGTQNPKYVLAEYLWPQVSPLVDIDF
Ga0318521_100235846	3300031770	Soil	PSYLDMDAAFCDRMRLAITAGLESAPIGVITTPGTQNRTQNPKYAPTEHFCPQASPLVDMDF
Ga0318521_103562722	3300031770	Soil	MDAAFCARLRNAIEAGLENAPVGVITTPGTQNPKYVPTEHFWPQVSPLVDMDF
Ga0318546_104709422	3300031771	Soil	LDMDAAFCDRMRLAITAGLESAPIGVITTPGTQNPKYAPTEHFCPQASPLVDMDF
Ga0318543_100176851	3300031777	Soil	FCSRMRLALAAGLESAPIGVVTTPGTQNPKYVLAEHLWPQVSPLVDIDF
Ga0318508_11936271	3300031780	Soil	AFCARLRNAIEAGLENAPVGVITTPGTQNPKYVPTEHFWPQVSPLVDMDF
Ga0318576_102773711	3300031796	Soil	HVRYASHWDIDDAFCARMRMAIEAGLESAPFGVITTPGTKNPKYVPAEPRPLGFSSGD
Ga0318568_102210761	3300031819	Soil	AGLESAPIGVVTTPGTQNPKYVLAEHLWPQVSPLVDIDF
Ga0318567_103675863	3300031821	Soil	HVAYASHFDMDVAFCARMRAAIAAGLESAPIGVITTPGTKNPKYVPTEHWSPSCSSGNMD
Ga0310917_101893612	3300031833	Soil	MDDEIRSLHYFDMDAAFCARMRWALAAGLESAPIGVVTTPGTEKPKYVRAELRPLTSSSANMDF
Ga0318527_100183051	3300031859	Soil	GKPSYLDMDAAFCDRMRLAITAGLESAPIGVITTPGTQNPKYAPTEHFCPQASPLVDMDF
Ga0306919_101134123	3300031879	Soil	MGMSDDNKIQSHENRMDDAFCARLRAAIEAGLESAPIGVVTTPGTQSPKYVSTEHLWPQVSPLADIDF
Ga0306925_119025571	3300031890	Soil	IQWRFLDMDDAFCARMRAAIEAGLESAPVGVVTTPGTQNPKYIATEPWLLGSSSGDFDF
Ga0318536_103840201	3300031893	Soil	VAFCARMRWALAAGLESAPIGVVTTPGTQNPKYVLAEHLWPQVSPLADIDF
Ga0318551_103311091	3300031896	Soil	GLESAPIGVVTTPGTQNPKYVLAEYLWPQVSPLVDIDF
Ga0306923_102059491	3300031910	Soil	MDDAIQWRFLDMDDAFCARMRAAIEAGLESAPVGVVTTPGTQNPKYIATEPWLLGSSSGDFDF
Ga0306921_101274451	3300031912	Soil	HATYASHWDMDDAFCARMRWALAAGLESAPIGVVTTPGTEKPKYVRAELRPLTSSSANMD
Ga0306921_121348231	3300031912	Soil	DDAIQWRFLDMDDAFCARMRAAIEAGLESAPVGVVTTPGTQNPKYIATEPWLLGSSSGDFDF
Ga0310916_100145561	3300031942	Soil	WDMDDAFCSRMRMAIAAGLENAPIGVITTPGTQHPKYVPAAQRPHPLVSSLVDMDF
Ga0310916_102450342	3300031942	Soil	MDAAFCARLRTAIAAGLESAPVRVITTPGTKNPKYVPTEHFWPQVSPLVDMDF
Ga0310913_106736201	3300031945	Soil	SHVDMDAAFCARLRTAIAAGLESAPVRVITTPGTKNPKYVPTEHFWPQVSPLVDMDF
Ga0310910_100678295	3300031946	Soil	AANGKPSYLDMDAAFCDRMRLAITAGLESAPIGVITTPGTQNPKYAPTEHFCPQASPLVDMDF
Ga0310910_102471651	3300031946	Soil	RYASHWDIDDAFCARMRMAIEAGLESAPFGVITTPGTKNPKYVPAEPRPLGFSSGD
Ga0306922_105374211	3300032001	Soil	VMDDEIQWRFLDMDDAFCARMRAAIEAGLESAPVGVVTTPGTQNPKYIATEPWLLGSSSGDFDF
Ga0306922_118817471	3300032001	Soil	NKIQSHENRMDDAFCARLRAAIEAGLESAPIGVVTTPGTQSPKYVSTEHLWPQVSPLADIDF
Ga0318549_102089902	3300032041	Soil	MGDDEIIPGRFFDMDAAFCARMRAAIARGLESAPIGVVTTPGTEKPKYVRAELRPLTSSSANMDF
Ga0318558_105038552	3300032044	Soil	IYAAHFNMDAAFCSRMCAAIAAGLESAPVGVVTTPGTKNPKYVPTDLPPLASSLSDRDFA
Ga0318506_103936252	3300032052	Soil	ANGKPSYLDMDAAFCDRMRLAITAGLESAPIGVITTPGTQNPKYAPTEHFCPQASPLVDMDF
Ga0318506_105450701	3300032052	Soil	MDDEIQWRFLDMDDAFCARMRAAIEAGLESAPVGVVTTPGTQNPKYVPAAQPPRPLVSSLVDMMDV
Ga0318533_100675306	3300032059	Soil	DMDAAFCARLRNAIEAGLENAPVGVITTPGTQNPKYVPTEHFWPQVSPLVDMDF
Ga0318504_101101271	3300032063	Soil	RMRWALAAGLESAPIGVVTTPGTQNPKYVLAEHLWPQVSPLVDIDF
Ga0318510_100819402	3300032064	Soil	DMDDAFCARMRWALAAGLESAPIGVVTTPGTQNPKYVLAEYLWPQVSPLVDIDF
Ga0318510_103813783	3300032064	Soil	VTYASHVDMDAAFCARLRNAIEAGLENAPVGVITTPGTQNPKYVPTEHFWPQVSPLVDMD
Ga0318514_101425493	3300032066	Soil	FCARMRWALAAGLESAPIGVVTTPGTQNPKYVLAEHLWPQVSPLVDIDF
Ga0306924_102615344	3300032076	Soil	DETHLHVTYASHCDMDQAFCARMRAAIEAGLESAPVGIVTTPGTQAPRYVPAEPRLPASPSGNTNF
Ga0306924_115908801	3300032076	Soil	DMDDAFCARMHKAIFAGLENPPIGVVTTPGTKKPRYVRAEPPRPLASSSLADMDF
Ga0307472_1006943011	3300032205	Hardwood Forest Soil	CARFRVAIAAGLEKAPIGVITTPGTQRPKYLLAEPLWTLACPLVDLDF
Ga0306920_1011395771	3300032261	Soil	WDMDDAFCSRMRMAIAAGLESAPIGVVTTPGTQHPKYVPAAQPPRPLVSSLVDMMDV
Ga0306920_1025117002	3300032261	Soil	EIQWRFLDMDDAFCARMRAAIEAGLESAPVGVVTTPGTQNPKYIATEPWLLGSSSGDFDF
Ga0306920_1042945552	3300032261	Soil	DMDEAFCARLRNAIEAGLENAPVGVITTPGTQNPKYVPTEHFWPQVSPLVDMDF
Ga0318519_100874883	3300033290	Soil	CARMRWALAAGLESAPIGVVTTPGTQNPKYVLAEHLWPQVSPLVDIDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067066

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences