Metagenome / Metatranscriptome Family F067068

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067068
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	53 residues
Representative Sequence	MARKPHTIFVTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTSAKGAIYRPALWKVY
Number of Associated Samples	98
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.33 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	84.92 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (30.159 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.206 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 48.21% β-sheet: 0.00% Coil/Unstructured: 51.79%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF01887	SAM_HAT_N	13.49
PF08818	DUF1801	8.73
PF05721	PhyH	2.38
PF00535	Glycos_transf_2	0.79
PF00908	dTDP_sugar_isom	0.79
PF00581	Rhodanese	0.79
PF07885	Ion_trans_2	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1912	Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming)	Defense mechanisms [V]	13.49
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	8.73
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	8.73
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	8.73
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.38
COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme	Cell wall/membrane/envelope biogenesis [M]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.41 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.44 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	40.48 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	35.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	4.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	35.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	4.76 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035918004\|FACENC_F56XM5W01AUVCK	Not Available	515	Open in IMG/M
2166559005\|cont_contig12415	Not Available	1468	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1015933	Not Available	1204	Open in IMG/M
3300000955\|JGI1027J12803_107297770	Not Available	772	Open in IMG/M
3300001867\|JGI12627J18819_10376972	Not Available	575	Open in IMG/M
3300002245\|JGIcombinedJ26739_101221161	Not Available	641	Open in IMG/M
3300002917\|JGI25616J43925_10079307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1377	Open in IMG/M
3300004281\|Ga0066397_10020492	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	977	Open in IMG/M
3300005163\|Ga0066823_10070081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300005172\|Ga0066683_10064071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2189	Open in IMG/M
3300005181\|Ga0066678_10935475	Not Available	565	Open in IMG/M
3300005332\|Ga0066388_100259549	All Organisms → cellular organisms → Bacteria → Proteobacteria	2378	Open in IMG/M
3300005332\|Ga0066388_100278407	Not Available	2316	Open in IMG/M
3300005332\|Ga0066388_100342820	All Organisms → cellular organisms → Bacteria → Proteobacteria	2140	Open in IMG/M
3300005332\|Ga0066388_100690638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1629	Open in IMG/M
3300005332\|Ga0066388_100747412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1578	Open in IMG/M
3300005332\|Ga0066388_102227949	All Organisms → cellular organisms → Bacteria → Proteobacteria	989	Open in IMG/M
3300005332\|Ga0066388_103538500	Not Available	797	Open in IMG/M
3300005363\|Ga0008090_10221802	All Organisms → cellular organisms → Bacteria → Proteobacteria	2481	Open in IMG/M
3300005406\|Ga0070703_10203185	Not Available	779	Open in IMG/M
3300005467\|Ga0070706_100060940	All Organisms → cellular organisms → Bacteria	3483	Open in IMG/M
3300005467\|Ga0070706_100928602	Not Available	803	Open in IMG/M
3300005471\|Ga0070698_101055231	Not Available	760	Open in IMG/M
3300005536\|Ga0070697_100232890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1571	Open in IMG/M
3300005552\|Ga0066701_10210444	Not Available	1195	Open in IMG/M
3300005554\|Ga0066661_10293019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1003	Open in IMG/M
3300005713\|Ga0066905_101633780	Not Available	590	Open in IMG/M
3300005764\|Ga0066903_100170446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3182	Open in IMG/M
3300005764\|Ga0066903_102217516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1059	Open in IMG/M
3300005764\|Ga0066903_102865721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	935	Open in IMG/M
3300005764\|Ga0066903_103158970	Not Available	891	Open in IMG/M
3300005764\|Ga0066903_104029066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	787	Open in IMG/M
3300005764\|Ga0066903_106360906	Not Available	616	Open in IMG/M
3300005764\|Ga0066903_108801837	Not Available	512	Open in IMG/M
3300006172\|Ga0075018_10749274	Not Available	532	Open in IMG/M
3300006173\|Ga0070716_101499260	Not Available	551	Open in IMG/M
3300006755\|Ga0079222_12692420	Not Available	500	Open in IMG/M
3300006794\|Ga0066658_10231799	Not Available	984	Open in IMG/M
3300006953\|Ga0074063_10016743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1379	Open in IMG/M
3300007265\|Ga0099794_10007056	All Organisms → cellular organisms → Bacteria → Proteobacteria	4590	Open in IMG/M
3300009089\|Ga0099828_10134679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2171	Open in IMG/M
3300009147\|Ga0114129_11404647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	861	Open in IMG/M
3300009792\|Ga0126374_10664106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300010046\|Ga0126384_10313116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1295	Open in IMG/M
3300010048\|Ga0126373_10670956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1093	Open in IMG/M
3300010358\|Ga0126370_10364213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1173	Open in IMG/M
3300010358\|Ga0126370_10951270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	780	Open in IMG/M
3300010358\|Ga0126370_11204491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300010362\|Ga0126377_10723409	Not Available	1049	Open in IMG/M
3300010366\|Ga0126379_11864415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300010398\|Ga0126383_10393409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1420	Open in IMG/M
3300010398\|Ga0126383_11342081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	805	Open in IMG/M
3300012096\|Ga0137389_10364373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1231	Open in IMG/M
3300012180\|Ga0153974_1050438	Not Available	914	Open in IMG/M
3300012189\|Ga0137388_10400705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1270	Open in IMG/M
3300012199\|Ga0137383_10111561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1990	Open in IMG/M
3300012203\|Ga0137399_11392999	Not Available	587	Open in IMG/M
3300012205\|Ga0137362_10253824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1520	Open in IMG/M
3300012205\|Ga0137362_10566402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981	Open in IMG/M
3300012207\|Ga0137381_11055436	Not Available	700	Open in IMG/M
3300012208\|Ga0137376_10409363	Not Available	1178	Open in IMG/M
3300012356\|Ga0137371_10142227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1880	Open in IMG/M
3300012361\|Ga0137360_11029163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300012362\|Ga0137361_10584089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1024	Open in IMG/M
3300012923\|Ga0137359_11047839	Not Available	699	Open in IMG/M
3300012927\|Ga0137416_10693374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	894	Open in IMG/M
3300012929\|Ga0137404_10601605	Not Available	989	Open in IMG/M
3300012948\|Ga0126375_11047626	Not Available	668	Open in IMG/M
3300012984\|Ga0164309_10529439	Not Available	908	Open in IMG/M
3300016270\|Ga0182036_10027465	Not Available	3337	Open in IMG/M
3300016294\|Ga0182041_10605839	Not Available	963	Open in IMG/M
3300016357\|Ga0182032_10616780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	904	Open in IMG/M
3300016404\|Ga0182037_12168586	Not Available	500	Open in IMG/M
3300016445\|Ga0182038_10723820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	868	Open in IMG/M
3300018433\|Ga0066667_10125282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1764	Open in IMG/M
3300018468\|Ga0066662_10209712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1550	Open in IMG/M
3300020579\|Ga0210407_10599431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	859	Open in IMG/M
3300021178\|Ga0210408_10740385	Not Available	772	Open in IMG/M
3300021178\|Ga0210408_11202555	Not Available	579	Open in IMG/M
3300021403\|Ga0210397_11150385	Not Available	603	Open in IMG/M
3300021560\|Ga0126371_13425954	Not Available	535	Open in IMG/M
3300021560\|Ga0126371_13481570	Not Available	531	Open in IMG/M
3300022712\|Ga0242653_1117982	Not Available	500	Open in IMG/M
3300024288\|Ga0179589_10458342	Not Available	589	Open in IMG/M
3300025910\|Ga0207684_10127245	Not Available	2186	Open in IMG/M
3300025910\|Ga0207684_10448820	Not Available	1107	Open in IMG/M
3300025922\|Ga0207646_10502518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1092	Open in IMG/M
3300025922\|Ga0207646_11520772	Not Available	579	Open in IMG/M
3300026317\|Ga0209154_1079719	Not Available	1413	Open in IMG/M
3300027502\|Ga0209622_1020149	Not Available	1164	Open in IMG/M
3300027882\|Ga0209590_10070842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2007	Open in IMG/M
3300028047\|Ga0209526_10552327	Not Available	744	Open in IMG/M
3300031543\|Ga0318516_10008411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4877	Open in IMG/M
3300031543\|Ga0318516_10028087	Not Available	2944	Open in IMG/M
3300031543\|Ga0318516_10045464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2375	Open in IMG/M
3300031543\|Ga0318516_10293610	Not Available	939	Open in IMG/M
3300031543\|Ga0318516_10361160	Not Available	838	Open in IMG/M
3300031543\|Ga0318516_10464951	Not Available	727	Open in IMG/M
3300031544\|Ga0318534_10056345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2208	Open in IMG/M
3300031544\|Ga0318534_10370838	Not Available	823	Open in IMG/M
3300031546\|Ga0318538_10257036	Not Available	938	Open in IMG/M
3300031561\|Ga0318528_10789053	Not Available	508	Open in IMG/M
3300031564\|Ga0318573_10070047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1751	Open in IMG/M
3300031572\|Ga0318515_10759505	Not Available	512	Open in IMG/M
3300031640\|Ga0318555_10019255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3188	Open in IMG/M
3300031668\|Ga0318542_10280705	Not Available	850	Open in IMG/M
3300031679\|Ga0318561_10618206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300031713\|Ga0318496_10575169	Not Available	623	Open in IMG/M
3300031723\|Ga0318493_10777972	Not Available	538	Open in IMG/M
3300031747\|Ga0318502_10062421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1989	Open in IMG/M
3300031747\|Ga0318502_10144948	Not Available	1351	Open in IMG/M
3300031751\|Ga0318494_10496802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300031777\|Ga0318543_10012584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2996	Open in IMG/M
3300031782\|Ga0318552_10079127	Not Available	1600	Open in IMG/M
3300031796\|Ga0318576_10366910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300031798\|Ga0318523_10299816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	802	Open in IMG/M
3300031799\|Ga0318565_10212816	Not Available	940	Open in IMG/M
3300031835\|Ga0318517_10048079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1778	Open in IMG/M
3300031845\|Ga0318511_10152586	Not Available	1010	Open in IMG/M
3300031890\|Ga0306925_12069202	Not Available	534	Open in IMG/M
3300031894\|Ga0318522_10017019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2302	Open in IMG/M
3300031896\|Ga0318551_10112672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1458	Open in IMG/M
3300031912\|Ga0306921_12093263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300031945\|Ga0310913_10244175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1260	Open in IMG/M
3300032052\|Ga0318506_10060794	Not Available	1548	Open in IMG/M
3300032180\|Ga0307471_101794789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.62%
Host-Associated	Host-Associated	1.59%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.83%
Aquatic	Environmental → Aquatic	0.79%
Plants	Host-Associated → Plants	0.79%
Fungi	Host-Associated → Fungi	0.79%
Modeled	Engineered → Modeled	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.83%
Sediment	Environmental → Aquatic → Sediment	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.79%
Mycelium	Host-Associated → Fungi → Mycelium	0.79%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.02%
Loam	Environmental → Terrestrial → Soil → Loam	23.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.79%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.79%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.79%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.79%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.79%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035918004	Soil microbial communities from sample at FACE Site 2 North Carolina CO2-	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCA_6183760	2035918004	Soil	MARKPHTIFVTFAAVVVMAVFVALTTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY
cont_0415.00001170	2166559005	Simulated	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY
AF_2010_repII_A01DRAFT_10159333	3300000580	Forest Soil	MAPHTIFLTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGAIYRSDLRXVY*
JGI1027J12803_1072977703	3300000955	Soil	RKAHTIFVTFAAVLVMAVFVAITTWAAVPKSHSESAAPTSAKGAIYRPALW
JGI12627J18819_103769721	3300001867	Forest Soil	MVPKPHAISVTFVTVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPALWKVY*
JGIcombinedJ26739_1012211612	3300002245	Forest Soil	MVPKPHAISVTFVTVLVMVVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPALWKVY*
JGI25616J43925_100793073	3300002917	Grasslands Soil	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY*
Ga0066397_100204921	3300004281	Tropical Forest Soil	APKPQKLGFIFAAVLVMAVFVAITTWAAVPKSHSDSAALTSAKGTIYRPDLWKVY*
Ga0066823_100700812	3300005163	Soil	MVPKPRTIFVTFAAVLVMAVFVAITTWAAVPKSHSDSTAFTSAKAAIYRPDLWKV
Ga0066683_100640713	3300005172	Soil	MATKPRTIFVTFAAVLVMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY*
Ga0066678_109354751	3300005181	Soil	MARKPRTIFVTFAAVLVMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY*
Ga0066388_1002595494	3300005332	Tropical Forest Soil	MAPKPHTIFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGANYRPDLRKVY*
Ga0066388_1002784074	3300005332	Tropical Forest Soil	MARKPHTIFVTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTSAKGAIYRPALWKVY*
Ga0066388_1003428203	3300005332	Tropical Forest Soil	MAAKPHTIFVTFAAVVVMAVFVAITTWAAVPKSHSDSAVPTSAKGAIYRPDLWKVY*
Ga0066388_1006906383	3300005332	Tropical Forest Soil	MARKLHTIFVSFAAVLVMAVFVAITTWAAVPKSHSDPAAPTSAKGTIYRPALWKVY*
Ga0066388_1007474122	3300005332	Tropical Forest Soil	MTAKPRTIFVTFTAVLVMAMFVAITTWAAVPKSHSDSTAFTSAKAAIYRPDLWKVY*
Ga0066388_1022279491	3300005332	Tropical Forest Soil	MAPKPHAIFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAP
Ga0066388_1035385001	3300005332	Tropical Forest Soil	NMAPHTIFMTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGANYRPDLRKVY*
Ga0008090_102218023	3300005363	Tropical Rainforest Soil	MAPHTIFLTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGAIYRSDLRKVY*
Ga0070703_102031852	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MARKPHTIFVAFAAVVVMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY*
Ga0070706_1000609401	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	KPRTIFVTFAAVLVMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY*
Ga0070706_1009286021	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPKSHSDSAAPTSAKGAIYRPALWKVY*
Ga0070698_1010552312	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MARKAHTIFVTFAAVLVMAVFVAITTWAAVPASHSDPAAPTSAKGAIYRPALWKVY*
Ga0070697_1002328901	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MARKAHTIFVTFAAVLVMAVFVAISTWAAVPKSHSDSAAPTWAKGAIYRPALWKVY*
Ga0066701_102104441	3300005552	Soil	MARKPRTIFVTFAAVLVMAVFVAITTWAAVPTSHSDPAAPASAKGAIYRPALWKVY*
Ga0066661_102930191	3300005554	Soil	MATKPRTIFVTFAAVLVMAVFVAITTWAAVPTSHSAPAAPASAKGAIYRPALWKVY*
Ga0066905_1016337802	3300005713	Tropical Forest Soil	MAPKPQKLGFIFAAVLVMAVFVAITTWAAVPKSHSDSAALTSAKGTIYRPDLWKVY*
Ga0066903_1001704469	3300005764	Tropical Forest Soil	MAPKPHAIFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPDLRKLY*
Ga0066903_1022175162	3300005764	Tropical Forest Soil	MAPKPHTIFAVVLVIAVCVAITTWAAVPKSHGDSAAPISAKATIYRPELWKVY*
Ga0066903_1028657212	3300005764	Tropical Forest Soil	MAPKPHTIFITFVAALVMAVFVAITTWAAVPKSHSDSAAPTWAKGANYRPDLRKVY*
Ga0066903_1031589701	3300005764	Tropical Forest Soil	MAPKPRTIFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPAWAKGAIYRPALWKVY*
Ga0066903_1040290662	3300005764	Tropical Forest Soil	MAPHTIFMIFAAVFVMAVFVAITTWAAVPKSHSDSAAPTWAKGAIYRSDLRKVY*
Ga0066903_1063609062	3300005764	Tropical Forest Soil	MAPHTIFLTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGANYRPDLRKVY*
Ga0066903_1088018371	3300005764	Tropical Forest Soil	MTAKPRTIFVTFTAVLVMAVFVAITTWAAVPKSHSDSAVPTSAKAAIYRPDLWKVY*
Ga0075018_107492742	3300006172	Watersheds	FVTFAAVVVMAVFVAITTWAAVPTSHSDPAAPASAKGAIYRPALWKVY*
Ga0070716_1014992602	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MARKPHTIFVTFAAVVVMAVFVALTTWAAVPTSHSDPAAPASAKGAIYRPALWKVY*
Ga0079222_126924201	3300006755	Agricultural Soil	MARKPHTIFVIFAAVVVMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY*
Ga0066658_102317992	3300006794	Soil	MATKPRTIFVTFAAVLVMAVFVAITTWAAVPTSHSDPAAPTWAKGAIYRPALWKVY*
Ga0074063_100167432	3300006953	Soil	MACKPHTIFVTFAAVLVMAVFVAITTWAAVPTSHSDPAAPASAKGAIYRPALWTVY*
Ga0099794_100070566	3300007265	Vadose Zone Soil	MARKQHTIFVTFAAVVVMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY*
Ga0099828_101346794	3300009089	Vadose Zone Soil	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPKSHSDSAAPASAKGAIYRPDLWKVY*
Ga0114129_114046472	3300009147	Populus Rhizosphere	MARKAHTIFVTFAAVLVMAVFVAITTWAAGPTSHSDPAAPTSAKGAIYRPALWKVY*
Ga0126374_106641061	3300009792	Tropical Forest Soil	MAPHTIFVTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGAIYRSDLRKVY*
Ga0126384_103131162	3300010046	Tropical Forest Soil	MAAKPHTIVVTFVAVLVMAVFVAITTWAAVPKSHGDSAAPTWAKGVNYRPDLRKVY*
Ga0126373_106709562	3300010048	Tropical Forest Soil	MAPHTIFMTFAAVLVMAVFVAITTWAAVPKSRSDSAAPTWAKGANYRPDLRKVY*
Ga0126370_103642132	3300010358	Tropical Forest Soil	MAPHTIFMTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGAIYRPDLRKVY*
Ga0126370_109512701	3300010358	Tropical Forest Soil	MAPKPHTIVVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGAIYRPALWKVY*
Ga0126370_112044911	3300010358	Tropical Forest Soil	MAPKPHTIFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGA
Ga0126377_107234091	3300010362	Tropical Forest Soil	MAAKPHTIVVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPDLRKLY*
Ga0126379_118644152	3300010366	Tropical Forest Soil	MAPHTILMTFAAVLVMAVFVAITTWAAVPKSRSDSAAPTWAKGANYRPDLRKVY*
Ga0126383_103934091	3300010398	Tropical Forest Soil	EGNMAPKPHTIFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGANYRPDLRKVY*
Ga0126383_113420812	3300010398	Tropical Forest Soil	MTAKPRTIFVTFTAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGAIYRPDLRKVY*
Ga0137389_103643731	3300012096	Vadose Zone Soil	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALW
Ga0153974_10504382	3300012180	Attine Ant Fungus Gardens	MACKPHTIFVIFAAVVVMAVFVAITTWAAVPKSHSDSAAPTWAK
Ga0137388_104007051	3300012189	Vadose Zone Soil	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPKSHSDSAAPASAKGAIYRP
Ga0137383_101115612	3300012199	Vadose Zone Soil	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPTSHSDPAAPTWAKGAIYRPALWKVY*
Ga0137399_113929991	3300012203	Vadose Zone Soil	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPTSHSDPAAPASAKGAIYRPALWTVY*
Ga0137362_102538243	3300012205	Vadose Zone Soil	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPRSHSDPAAPTSAKGAIYRPALWKVY*
Ga0137362_105664021	3300012205	Vadose Zone Soil	CLIQEGNMARKPHTIFVTFAAVVVMAVFVAITTWAAVPKSHSDSAAPASAKGAIYRPDLWKVY*
Ga0137381_110554362	3300012207	Vadose Zone Soil	MATKPRTIFVTFAAVLVMAVFVAITTWAAVPTSHSDPAAPASAKGAIYRPALWKVY*
Ga0137376_104093633	3300012208	Vadose Zone Soil	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPTSHSDPAAPASAKGAIYRPALWKVY*
Ga0137371_101422272	3300012356	Vadose Zone Soil	MATKPRTLFVTFASVLVMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY*
Ga0137360_110291632	3300012361	Vadose Zone Soil	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPTSHSDPAAPASA
Ga0137361_105840891	3300012362	Vadose Zone Soil	MARKAHTIFVTFAAVVVMAVFVAITTWAAVPKSHSDSAAPASAKGAIYRPDLWKVY*
Ga0137359_110478392	3300012923	Vadose Zone Soil	MARKPHTIFVTFAAVVVMAVFVAITTLAAVPKSHSDSAAPTSAKGAIYRPALWKVY*
Ga0137416_106933742	3300012927	Vadose Zone Soil	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPTSHSDP
Ga0137404_106016052	3300012929	Vadose Zone Soil	MACKPHTIFVTFAAVVVMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY*
Ga0126375_110476261	3300012948	Tropical Forest Soil	GNMAAKPHTIFVTFVTVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPDLRKLY*
Ga0164309_105294391	3300012984	Soil	MFVTFVTVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPDLRKLY*
Ga0182036_100274657	3300016270	Soil	MAPKPHTIFVTFAAVLVMALFVAITTWAAVPKSHSDSAALASAKGAIYRPDLWKVY
Ga0182041_106058391	3300016294	Soil	MARKPHTIFVTFAAVVGMAVFVAITTWAAVPTSHSDPAAPTSAKGA
Ga0182032_106167803	3300016357	Soil	MAPKPRSIFVTFVAVLAMAVSVAITTWAAVPKSHSDPAAPTSAKGTIYRPALWKVY
Ga0182037_121685861	3300016404	Soil	MAPKPHTIFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGANYRPDLRKVY
Ga0182038_107238203	3300016445	Soil	VTFVAVLVMAVFVAITTWAAVPKSHSDPAAPTSAKGTIYRPALWKVY
Ga0066667_101252822	3300018433	Grasslands Soil	MATKPRTIFVTFAAVLVMAVFVAITTWAAVPTSHSDPAAPASAKGAIYRPALWKVY
Ga0066662_102097121	3300018468	Grasslands Soil	MATKPRTIFVTFAAVLVMAVFVAITTWAAVPTSHSDPAAPTWAKGAIYRPALWKVY
Ga0210407_105994312	3300020579	Soil	MAPKPHAMFVTFVTVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPDLRKLY
Ga0210408_107403851	3300021178	Soil	TFVTVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPALWKVY
Ga0210408_112025552	3300021178	Soil	MAPKPHAMFVTFVTVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPALWKVY
Ga0210397_111503852	3300021403	Soil	MVPKPHAISVTFVTVFVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPALWKVY
Ga0126371_134259542	3300021560	Tropical Forest Soil	MTAKPRTIFVTFTAVLVMAMFVAITTWAAVPKSHSDSTAFTSAKAAIYRPDLWKVY
Ga0126371_134815701	3300021560	Tropical Forest Soil	MAPHTIFMTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGAIYRPDLRKVY
Ga0242653_11179822	3300022712	Soil	PKPHAMFVTFVTVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPALWKVY
Ga0179589_104583422	3300024288	Vadose Zone Soil	MAPKPHTIFVTFAAVLVMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY
Ga0207684_101272453	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MARKPRTIFVTFAAVLVMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY
Ga0207684_104488203	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPKSHSDSAAPTSAKGAIYRPALWKVY
Ga0207646_105025183	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FVTFAAVVVMAVFVAITTWAAVPKSHSDSAAPTSAKGAIYRPALWKVY
Ga0207646_115207721	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MATKPRTIFVTFAAVLVMAVFVAITTWAAVPTSHSDPAAPTSAKG
Ga0209154_10797191	3300026317	Soil	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPTSHSDPAAPASAKGAIYRPALWKVY
Ga0209622_10201492	3300027502	Forest Soil	MARKPHTIFVIFAAVVVMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY
Ga0209590_100708424	3300027882	Vadose Zone Soil	MARKPHTIFVTFAAVVVMAVFVAITTWAAVPKSHSDSAAPASAKGAIYRPDLWKVY
Ga0209526_105523273	3300028047	Forest Soil	MVPKPHAISVTFVTVLVMVVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPALWKVY
Ga0318516_100084118	3300031543	Soil	MAPKLRSIFVTFVAVLVMAVFVAITTWAAVPKSHGDSAAPAWAKGAIYRPALWKVY
Ga0318516_100280873	3300031543	Soil	MAPKPHTIFVTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPDLRKVY
Ga0318516_100454641	3300031543	Soil	MAPKPRTIFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPAWAKGAIYRPALWKVY
Ga0318516_102936102	3300031543	Soil	MAPKPHTIFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGAIYRPALWKVY
Ga0318516_103611602	3300031543	Soil	MARKPHTIFVTFAAVVGMAVFVAITTWAAVPTSHSDPAAPTSAKGAIYRPALWKVY
Ga0318516_104649511	3300031543	Soil	MARKLHTIFVSFAAVLVMAVFVAITTWAAVPKSHSDPAAPTSAKGTIYRPALWKVY
Ga0318534_100563452	3300031544	Soil	MAPKLRSIFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPAWAKGAIYRPALWKVY
Ga0318534_103708381	3300031544	Soil	MAPKPHTIFVTFVAVLVIALCVAITTWAAVPKSRGDSAAPTWAKGAIYRPDLWKVY
Ga0318538_102570361	3300031546	Soil	MAPKPRSIFVTFVAVLVMAVFVAITTWAAVPKSHGDSAAPAWAKGAIYRPALWKVY
Ga0318528_107890531	3300031561	Soil	KLHTIFVSFAAVLVMAVFVAITTWAAVPKSHSDPAAPTSAKGTIYRPALWKVY
Ga0318573_100700474	3300031564	Soil	IFVSFAAVLVMAVFVAITTWAAVPKSHSDPAAPTSAKGTIYRPALWKVY
Ga0318515_107595051	3300031572	Soil	MARKPHTIFVTFAAVVGMAVFVAITTWAAVPTSHSDPAAPTSA
Ga0318555_100192557	3300031640	Soil	MAPKPRTIFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPAWAK
Ga0318542_102807053	3300031668	Soil	VTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPDLRKVY
Ga0318561_106182061	3300031679	Soil	MAPKPHTIFVTFAAVLVMAVFVAITTWAAVPKSHSDSAAPT
Ga0318496_105751691	3300031713	Soil	MAPKPHTIFVTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVKYRPDLRKVY
Ga0318493_107779722	3300031723	Soil	MAPKPRTIFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPAWAKGA
Ga0318502_100624213	3300031747	Soil	MAPKPRSIFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPAWAKGAIYRPALWKVY
Ga0318502_101449483	3300031747	Soil	IFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGAIYRPALWKVY
Ga0318494_104968022	3300031751	Soil	MAPKPHTIFVTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYR
Ga0318543_100125843	3300031777	Soil	MAPKPRTIFVTFVAVLVMAVFVAITTWAAVPKSHGDSAAPAWAKGAIYRPALWKVY
Ga0318552_100791273	3300031782	Soil	IFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPAWAKGAIYRPALWKVY
Ga0318576_103669102	3300031796	Soil	MARKLHTIFVSFAAVLVMAVFVAITTWAAVPKSHSDPA
Ga0318523_102998162	3300031798	Soil	MAPKPHTIFVTFVAVLVMAVFVAITTWAAVPKSHPDSAAPGWGKGAIYRPALWK
Ga0318565_102128161	3300031799	Soil	MAPKPHTIFVTFVAVLVIALCVAITTWAAVPKSRGDSAAPTWKGAIYRPDLWKVY
Ga0318517_100480794	3300031835	Soil	MAPKPRTIFVTFVAVLVMAVFVAITTWAAVPKSHSDSAAPAWAKGAI
Ga0318511_101525863	3300031845	Soil	FVTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPDLRKVY
Ga0306925_120692022	3300031890	Soil	MAPKLRSIFVTFVAVLAMAVFVAITTWAAVPKSHGDSAAPAWAKGAIYRPALWKVY
Ga0318522_100170191	3300031894	Soil	MAPKPRTIFVTFVAVLVMAVFVAITTWAAVPKSHSDS
Ga0318551_101126724	3300031896	Soil	MAPKLRSIFVTFVAVLVMAVFVAITTWAAVPKSHGDSAAPAWAKGAI
Ga0306921_120932632	3300031912	Soil	MLPKPRTIFVTFAAVVVMAVFVAITTWAAVPKSHSDSAAPTWANGA
Ga0310913_102441751	3300031945	Soil	FVSFAAVLVMAVFVAITTWAAVPKSHSDPAAPTSAKGTIYRPALWKVY
Ga0318506_100607941	3300032052	Soil	IFVTFAAVLVMAVFVAITTWAAVPKSHSDSAAPTWAKGVNYRPDLRKVY
Ga0307471_1017947892	3300032180	Hardwood Forest Soil	MARKAHTIFVTFAAVLVMAVFVAISTWAAVPKSHSDSAAPTSAKGAIYRPALWKVY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067068

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences