NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F067081

Metagenome / Metatranscriptome Family F067081

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F067081
Family Type Metagenome / Metatranscriptome
Number of Sequences 126
Average Sequence Length 42 residues
Representative Sequence LTAFLDVLHLDEDYWQNVAEYETAIARLEQLTGLSLREEGAKR
Number of Associated Samples 103
Number of Associated Scaffolds 126

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.97 %
% of genes near scaffold ends (potentially truncated) 95.24 %
% of genes from short scaffolds (< 2000 bps) 86.51 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.413 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(36.508 % of family members)
Environment Ontology (ENVO) Unclassified
(36.508 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.238 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 52.11%    β-sheet: 0.00%    Coil/Unstructured: 47.89%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 126 Family Scaffolds
PF16576HlyD_D23 69.84
PF00873ACR_tran 9.52
PF02321OEP 3.17
PF13115YtkA 2.38
PF12700HlyD_2 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 126 Family Scaffolds
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 6.35

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.21 %
UnclassifiedrootN/A0.79 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002907|JGI25613J43889_10118790All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis671Open in IMG/M
3300002914|JGI25617J43924_10129100All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis884Open in IMG/M
3300005166|Ga0066674_10042311All Organisms → cellular organisms → Bacteria2039Open in IMG/M
3300005167|Ga0066672_10078042All Organisms → cellular organisms → Bacteria1975Open in IMG/M
3300005332|Ga0066388_103124387All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300005538|Ga0070731_10024658All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis4121Open in IMG/M
3300005547|Ga0070693_100550881All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis825Open in IMG/M
3300005575|Ga0066702_10996563All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium501Open in IMG/M
3300005576|Ga0066708_10003388All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6419Open in IMG/M
3300005591|Ga0070761_10197444All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis1191Open in IMG/M
3300005602|Ga0070762_10103966All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis1648Open in IMG/M
3300006034|Ga0066656_10474127All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis816Open in IMG/M
3300006172|Ga0075018_10114116All Organisms → cellular organisms → Bacteria1213Open in IMG/M
3300006800|Ga0066660_10628409All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis894Open in IMG/M
3300006800|Ga0066660_11698416All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis503Open in IMG/M
3300006854|Ga0075425_102359903All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis590Open in IMG/M
3300006893|Ga0073928_10188052All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1628Open in IMG/M
3300006903|Ga0075426_11457749All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium520Open in IMG/M
3300007258|Ga0099793_10142317All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300007258|Ga0099793_10647768All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300007258|Ga0099793_10695240All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium513Open in IMG/M
3300009090|Ga0099827_11301823All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300009090|Ga0099827_11635095All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300009093|Ga0105240_10037038All Organisms → cellular organisms → Bacteria6270Open in IMG/M
3300009143|Ga0099792_10045145All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2122Open in IMG/M
3300010323|Ga0134086_10310741All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium614Open in IMG/M
3300010358|Ga0126370_10181111All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1572Open in IMG/M
3300010360|Ga0126372_11586726All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300010361|Ga0126378_11579384All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium745Open in IMG/M
3300010379|Ga0136449_101717759All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium945Open in IMG/M
3300011269|Ga0137392_10125091All Organisms → cellular organisms → Bacteria2055Open in IMG/M
3300011269|Ga0137392_10872923All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium741Open in IMG/M
3300011271|Ga0137393_10347354All Organisms → cellular organisms → Bacteria1267Open in IMG/M
3300011271|Ga0137393_11384906All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium592Open in IMG/M
3300012096|Ga0137389_11169822All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium659Open in IMG/M
3300012096|Ga0137389_11721406All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300012189|Ga0137388_10012131All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6144Open in IMG/M
3300012189|Ga0137388_10505456All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300012189|Ga0137388_10616297All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1009Open in IMG/M
3300012189|Ga0137388_10981467All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium780Open in IMG/M
3300012198|Ga0137364_11482089All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300012199|Ga0137383_10974713All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium618Open in IMG/M
3300012202|Ga0137363_10695616All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium860Open in IMG/M
3300012202|Ga0137363_11581184All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium547Open in IMG/M
3300012202|Ga0137363_11804120All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300012205|Ga0137362_10547170All Organisms → cellular organisms → Bacteria1000Open in IMG/M
3300012209|Ga0137379_10961741All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium759Open in IMG/M
3300012351|Ga0137386_10400540All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium988Open in IMG/M
3300012361|Ga0137360_11530314All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300012362|Ga0137361_11089770All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium719Open in IMG/M
3300012362|Ga0137361_11275960All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium658Open in IMG/M
3300012363|Ga0137390_10094934All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium2944Open in IMG/M
3300012363|Ga0137390_10593025All Organisms → cellular organisms → Bacteria1076Open in IMG/M
3300012582|Ga0137358_10385746All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium948Open in IMG/M
3300012683|Ga0137398_10282283All Organisms → cellular organisms → Bacteria1113Open in IMG/M
3300012918|Ga0137396_10146826All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1715Open in IMG/M
3300012923|Ga0137359_11717469All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300012925|Ga0137419_11892271All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M
3300012925|Ga0137419_11979877All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium501Open in IMG/M
3300012927|Ga0137416_11989650All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300012929|Ga0137404_11766589All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium575Open in IMG/M
3300012930|Ga0137407_11044649All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium774Open in IMG/M
3300013104|Ga0157370_10196283All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium1873Open in IMG/M
3300014495|Ga0182015_10845992Not Available574Open in IMG/M
3300015053|Ga0137405_1190189All Organisms → cellular organisms → Bacteria1022Open in IMG/M
3300015054|Ga0137420_1405988All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3449Open in IMG/M
3300015242|Ga0137412_11261501All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300015358|Ga0134089_10197289All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium809Open in IMG/M
3300016387|Ga0182040_10388525All Organisms → cellular organisms → Bacteria1092Open in IMG/M
3300016387|Ga0182040_11924834All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300016404|Ga0182037_10753515All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300017934|Ga0187803_10354908All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300018003|Ga0187876_1256763All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300018020|Ga0187861_10380833All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300018034|Ga0187863_10692750All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300018062|Ga0187784_10715885All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300018085|Ga0187772_11298154All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300018431|Ga0066655_11027697All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300018433|Ga0066667_10187667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1505Open in IMG/M
3300020581|Ga0210399_10774687All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium785Open in IMG/M
3300020581|Ga0210399_10916536All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium710Open in IMG/M
3300021168|Ga0210406_10834269All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium699Open in IMG/M
3300021170|Ga0210400_11172718All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300021178|Ga0210408_10100805All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2269Open in IMG/M
3300021401|Ga0210393_11405989All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300021401|Ga0210393_11455861All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M
3300021407|Ga0210383_11237299All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium626Open in IMG/M
3300021432|Ga0210384_10793203All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium845Open in IMG/M
3300022731|Ga0224563_1008899All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium795Open in IMG/M
3300023030|Ga0224561_1015195All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium637Open in IMG/M
3300024271|Ga0224564_1003703All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2348Open in IMG/M
3300025320|Ga0209171_10571454All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
3300025910|Ga0207684_11413028All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300026301|Ga0209238_1017149All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2790Open in IMG/M
3300026320|Ga0209131_1146953All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1197Open in IMG/M
3300026467|Ga0257154_1003252All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum2022Open in IMG/M
3300026496|Ga0257157_1022430All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1029Open in IMG/M
3300026538|Ga0209056_10312618All Organisms → Viruses → Predicted Viral1071Open in IMG/M
3300026557|Ga0179587_10042301All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2587Open in IMG/M
3300026557|Ga0179587_10117945All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1625Open in IMG/M
3300027616|Ga0209106_1120857All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium587Open in IMG/M
3300027727|Ga0209328_10139126All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300027853|Ga0209274_10129146All Organisms → cellular organisms → Bacteria1263Open in IMG/M
3300027862|Ga0209701_10006167All Organisms → cellular organisms → Bacteria7833Open in IMG/M
3300027869|Ga0209579_10017677All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4093Open in IMG/M
3300027875|Ga0209283_10733782All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium614Open in IMG/M
3300027879|Ga0209169_10517762All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium626Open in IMG/M
3300027903|Ga0209488_10672680All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium744Open in IMG/M
3300027915|Ga0209069_11043234All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300028047|Ga0209526_10467767All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium827Open in IMG/M
3300028906|Ga0308309_11309000All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300029636|Ga0222749_10652660All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium576Open in IMG/M
3300029636|Ga0222749_10695108All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300031122|Ga0170822_13992123All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300031708|Ga0310686_114612251All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium581Open in IMG/M
3300031708|Ga0310686_115895426All Organisms → cellular organisms → Bacteria3243Open in IMG/M
3300031708|Ga0310686_118460345All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300031744|Ga0306918_10928249All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium677Open in IMG/M
3300031893|Ga0318536_10386129All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium708Open in IMG/M
3300031941|Ga0310912_10609214All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium849Open in IMG/M
3300031946|Ga0310910_11081027All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium625Open in IMG/M
3300032035|Ga0310911_10124307All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1435Open in IMG/M
3300032059|Ga0318533_10487393All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300032059|Ga0318533_10571849All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium829Open in IMG/M
3300032180|Ga0307471_100487719All Organisms → cellular organisms → Bacteria1378Open in IMG/M
3300033486|Ga0316624_10182318All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1605Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil36.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil15.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.76%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.17%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.38%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.38%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.38%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.59%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.59%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.59%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.59%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.59%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.59%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.59%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.79%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.79%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.79%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.79%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.79%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.79%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300018003Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40EnvironmentalOpen in IMG/M
3300018020Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300022731Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4EnvironmentalOpen in IMG/M
3300023030Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2EnvironmentalOpen in IMG/M
3300024271Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5EnvironmentalOpen in IMG/M
3300025320Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026467Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-AEnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25613J43889_1011879023300002907Grasslands SoilYQNNRQDFPALLTSFLDVLHLDEEYWQNVAERETALARIEELTGLSLHEEERKQ*
JGI25617J43924_1012910023300002914Grasslands SoilNKQEFQALLTAFLDVLHLDEDYWQNVAEYETAIARLERLTGLSLREEGAKR*
Ga0066674_1004231133300005166SoilNKQDFQAVLTAFLDVLHLDEDYWQNLAEYETAIARLEQMTGLALR*
Ga0066672_1007804213300005167SoilKQDFQAVLTAFLDVLHLDEEYWQNVAEYETAIARLEQITGLALR*
Ga0066388_10312438723300005332Tropical Forest SoilDFQAVLTAFLDVLRFDEEYWQNLAEYETAIGRLEQITGLALR*
Ga0070731_1002465833300005538Surface SoilVLHLDEEYWHDLSDRETALARLEELTGLSLREEGTQQ*
Ga0070693_10055088123300005547Corn, Switchgrass And Miscanthus RhizosphereQALLAAFLDVLRLDEEYWQNVAEYETSIARLEQITGLSLR*
Ga0066702_1099656323300005575SoilTAFLDVLHLDEEYWQNVAEYETAIARLEQITGLALR*
Ga0066708_1000338813300005576SoilQDFQAVLTAFLDVLHLDEDYYQNLAEYETAIARLEQMSGLALR*
Ga0070761_1019744423300005591SoilQDFQSLLSSFLDVLHLDEEYWQNTAERETALARLEQLSGMSLHDEGTKR*
Ga0070762_1010396623300005602SoilQEFQALLTAFLDVLHLDEDYWQNVAEYETAIARLEQLTGLSLRGEGAER*
Ga0066656_1047412723300006034SoilFQALLTAFLDVLHLDEDYWQNMAEYETAIARLEQLTGLSLHEEGAK*
Ga0075018_1011411613300006172WatershedsLDLLQLDEEYWQSAAERETALARLEELTGLSLHEEGESK*
Ga0066660_1062840913300006800SoilNKQDFQAVLTSFLDVLHLDEEYWQNLAEYETAIARLEQITGLSLR*
Ga0066660_1169841613300006800SoilSNRQDFPALLTSFLDVLHLDEEYWRSMAERETALAQLEQLTGLSLRGEGAKR*
Ga0075425_10235990323300006854Populus RhizosphereTSFLDVLHLDEEYWQNLAEYQTAIARIEQITGLSLR*
Ga0073928_1018805213300006893Iron-Sulfur Acid SpringHLDEDYWQNIAEYETAIARLEQLTGLSLHEEGAKR*
Ga0075426_1145774923300006903Populus RhizosphereAFLDVLHLDEEYWQNVAEYETAIARVEQITGLLLR*
Ga0099793_1014231723300007258Vadose Zone SoilFLDVLRFDQEYWQNVAEYETAIARLEQMTGLSLR*
Ga0099793_1064776813300007258Vadose Zone SoilLDVLHLDEDYWQNLAEYETAIARLEQLTRLTLHEEGAK*
Ga0099793_1069524023300007258Vadose Zone SoilSFLDVLHLDEEYWKSMAERETALARLEQLTGLSLREEGAKR*
Ga0099827_1130182323300009090Vadose Zone SoilVLASFLDFLHLDEEYWQSVAERETVLAQIEELTGLSLRVQEEKK*
Ga0099827_1163509523300009090Vadose Zone SoilLDEEYWQSAADRETALAQIEELTGLSLRVQEEKK*
Ga0105240_1003703813300009093Corn RhizosphereNNRQDFPSLLTSFLDVLKLDEEYWQSAADRETALARLEQLTGLPLREEGMSK*
Ga0099792_1004514533300009143Vadose Zone SoilHLDEDYWQNVAEYETAIARLERLTGLSLREEGAKR*
Ga0134086_1031074123300010323Grasslands SoilQSNKQDFQPVLIAFLDVLHLDEEYWQNLAEYETAIARLEQITGLALR*
Ga0126370_1018111123300010358Tropical Forest SoilFLDVLRLDEEYWQNLAEYETAIGRIEQITGLALR*
Ga0126372_1158672623300010360Tropical Forest SoilQSNKQDFQAVLTAFLDVLQLDENYWQSLTEYETAIARLEQTTGLALR*
Ga0126378_1157938413300010361Tropical Forest SoilLLASFLDVLHLDEEFWQHTAERETALARLEELTELSLRDEGAKQ*
Ga0136449_10171775913300010379Peatlands SoilLASFLDVLHLDEEYWKSIAERETALAQLDKLTGLSLRGEETKR*
Ga0137392_1012509113300011269Vadose Zone SoilTAFLDVLHLDEDYWQNVAEYESAIARLEQLTGLSLQEEGAK*
Ga0137392_1087292313300011269Vadose Zone SoilLTAFLDVLHLDEDYWQNMAEYETAVARIEQLTGLSLHNEGAK*
Ga0137393_1034735413300011271Vadose Zone SoilHLDEEYWQSAAERETALARVEELTGLSLQDEGTQK*
Ga0137393_1138490623300011271Vadose Zone SoilSNKQDFQAVLTAFLDVLHLDEDYWQNVAEYETAIARLEQLTGLSLREEGAKR*
Ga0137389_1116982213300012096Vadose Zone SoilAVLTAFLDVLHLDEDYWQNVAEYETAIARLEQLTGLSLRDGGAKR*
Ga0137389_1172140613300012096Vadose Zone SoilEFQALLTAFLDVLHLDEDYWQNVAEYETAIARLEQLTGMSLREEGAKR*
Ga0137388_1001213153300012189Vadose Zone SoilALLAAFLDVLHLDEEYWQNVAEYETSIARLEQITGLSLR*
Ga0137388_1050545613300012189Vadose Zone SoilNKQDFQAVLTAFLDVLHLDEDYWQNVAEYETAIARLEQLTGLSLREEGAKR*
Ga0137388_1061629723300012189Vadose Zone SoilLLTAFLDVLHFDEDYWQNIAEYETAIARLEQLTGLSLHEEGAK*
Ga0137388_1098146713300012189Vadose Zone SoilRQDFQSLLSSFLDVLHLDEEYWQNTAEREATLARLEELTGVSLHEEGARP*
Ga0137364_1148208913300012198Vadose Zone SoilKQDFQAVLTSFLDVLHLDEEYWQNFAEYETAIARLEQSTGLSLR*
Ga0137383_1097471313300012199Vadose Zone SoilQDFQAVLTSFLDVLHLDEEYWQNLAEYETAIARLEQITGLSLR*
Ga0137363_1069561613300012202Vadose Zone SoilFQALLTAFLDVLHLDEDYWQSIAEYETAIARLEQLTGLSLHEEGAK*
Ga0137363_1158118413300012202Vadose Zone SoilLAAFLSNQQNFQPVLIAFLDLLHLDEEYWQNLAEYQTAIARLEQITGLSLR*
Ga0137363_1180412023300012202Vadose Zone SoilASFLDVLHLDEEYWKSIAERETALARLEQLTGLSLRGEEVNR*
Ga0137362_1054717013300012205Vadose Zone SoilQSNKQEFQALLTAFLDVLHLDEDYWQNVAEYETAIARLEQLTGLSLREEGAKR*
Ga0137379_1096174123300012209Vadose Zone SoilLASFLDVLHLDEEYWQSAAERETALARVEELTGLSLHDEGAKK*
Ga0137386_1040054013300012351Vadose Zone SoilLTAFLDVLHLDEEYWQNAAEYETAIARLEQITGLSLR*
Ga0137360_1153031423300012361Vadose Zone SoilDFQAVLTSFLDVLHLDEEYWQNLAEYETAVARLEQITGLALR*
Ga0137361_1108977013300012362Vadose Zone SoilNKQEFQALLTAFLDVLHLDEDYWQNVAEYETAIARLEQLTGLSLREEGAKR*
Ga0137361_1127596023300012362Vadose Zone SoilLTAFLDVLHLDEDYWQNVAEYETAIARIEQLTGLSLREEGAKR*
Ga0137390_1009493413300012363Vadose Zone SoilAFLDVLHLDEDYWQNMAEYETAIARLEQLTGQSLHEEGAKR*
Ga0137390_1059302523300012363Vadose Zone SoilDVLHLDEEYWQSAAERETALAQLEELTGLSLHEEGATR*
Ga0137358_1038574623300012582Vadose Zone SoilTAFLDVLHLDEDYWQNVAEYETAIARLEQLTGLSLREEGAKR*
Ga0137398_1028228313300012683Vadose Zone SoilKQDFQVLLAAFLDVLRLDEEYWQNVAEYETAIARLEQITGLSLR*
Ga0137396_1014682613300012918Vadose Zone SoilSASFLDVLHLDEEYWKSMAERETALARLEQLTGLSLREEGAKR*
Ga0137359_1171746913300012923Vadose Zone SoilQAVLTSFLDVLHLDEEYWQNLAEYETAIARLEQITGLSLR*
Ga0137419_1189227123300012925Vadose Zone SoilLASFLDVLHLDEEYWQSAAERETALARLEELTGLSLHDEGEKR*
Ga0137419_1197987713300012925Vadose Zone SoilFQDLLTAFLDVLRFDQEYWHNVSEYQTAIARLEQITGLALR*
Ga0137416_1198965023300012927Vadose Zone SoilAFLDVLRFDQEYWQNVAEYETAIARLEQMTGLSLR*
Ga0137404_1176658923300012929Vadose Zone SoilFLDVLHLDEEYWQNLAEYETAVARLEQITGLSLR*
Ga0137407_1104464923300012930Vadose Zone SoilLLAAFLDVLHLDEEYWQNVTEYETSIARLEQITGLSLR*
Ga0157370_1019628333300013104Corn RhizosphereLAAYENNRQDFEAVLTAFLDVLHLDEEYWQNLSDRETALARIEELTGLSVTEEATRQ*
Ga0182015_1084599213300014495PalsaLTSYLDVLRLEQEKWQSVADHETALARLEQMTGLPL
Ga0137405_119018913300015053Vadose Zone SoilLDEEYWKSAADRETALARLEELTGLSLRVEGAKQ*
Ga0137420_140598873300015054Vadose Zone SoilAFLDVLHLDEDYWQNMAEYETAVARIEQLTGLSLHDEGTK*
Ga0137412_1126150113300015242Vadose Zone SoilVLIAFLDVLHLDEEYWQNLAEYETAIARLEQITGLSLR*
Ga0134089_1019728923300015358Grasslands SoilVLTAFLDVLHLDEEYWQNLAEYETAIARLEQITGLSLR*
Ga0182040_1038852523300016387SoilLTAFLDVLRLDEEYWQNLAEYETAIGRIEQITGLALR
Ga0182040_1192483413300016387SoilQDFQAVLTAFLDVLRLDEEYWQNLAEYETAIGRIEQITGLTLR
Ga0182037_1075351523300016404SoilFQAVLTAFLDVLHLDEEYWQDLAGYETAIARLEQITGLSLR
Ga0187803_1035490823300017934Freshwater SedimentQLDEEYWKSTAEHETALARLEELTGLSLRQEGESQ
Ga0187876_125676313300018003PeatlandDVLHLDEEYWQSIADRETALARLEELTGLSLHEEGTKR
Ga0187861_1038083323300018020PeatlandRLDEEYWQSVADRETALARLEELTGLSLHDERAKR
Ga0187863_1069275023300018034PeatlandQDFQALFASFLDVLRLDEEYWKNIADRETALARLEELTGLSLREGGIDQ
Ga0187784_1071588513300018062Tropical PeatlandLDVLRIEQENWQSVADHETALARLEQMTGVSLQPACAAKE
Ga0187772_1129815423300018085Tropical PeatlandFQALLKSFLDVLQLDEEYWQNVATREMAVAQLEGLTGLSLRGGGSKP
Ga0066655_1102769713300018431Grasslands SoilLLTAFLDVLHLDEDYWQNIAEYETAIARLEQLTGLSLHEEGAK
Ga0066667_1018766713300018433Grasslands SoilTAFLDVLHLDEDYWQNIAEYETAIARLEQLTGLSLHEEGAK
Ga0210399_1077468723300020581SoilFLDVLQLDEEYWQSAAERETALARLEELTGLSLHEEGTSK
Ga0210399_1091653613300020581SoilLLAAFLDVLHLEEEYWQSAAERETALARLEELTGLSLRDEGTAR
Ga0210406_1083426923300021168SoilFQALLTAFLDVLHLDEDYWQNLAEYETAIARLEQLTGLSLHEEGVK
Ga0210400_1117271813300021170SoilLTSFLDVLHLDEEYWQNLAGYQTAVARLEQITGLSLR
Ga0210408_1010080513300021178SoilLTAFLDVLHFDEEYWQNVSEYETAVARLEQITGLALR
Ga0210393_1140598913300021401SoilASFLDVLHLDEEYWQSVADRETALAHLEELTGLSLHEEGAAR
Ga0210393_1145586113300021401SoilLTAFLDVLHLDEDYWQNVAEYETAIARLEQLTGLSLREEGAKR
Ga0210383_1123729913300021407SoilMAAYQNNRQDFQSALSSFLDVLHLDEEYWQSLSERATALARIEELTGLSARGR
Ga0210384_1079320323300021432SoilHLDEDYWQNVAEYETAIARLEQLTGLSLHEEGAKQ
Ga0224563_100889923300022731SoilLDVLHLDEDYWQNIAEYETAIARVEQLTGLSLQEEGAK
Ga0224561_101519523300023030SoilYQNNRQDFQSLLSSFLDVLHLDEEYWQNTAERETALARLEQLTGLSLHDEGAKR
Ga0224564_100370333300024271SoilVLHLDEDYWQNLAEYETAIARLEQLTGLSLHEQGVKQ
Ga0209171_1057145423300025320Iron-Sulfur Acid SpringALLTAFLDVLHLDEDYWQNMAEYETAVARIEQLTGLSLHDEGAK
Ga0207684_1141302813300025910Corn, Switchgrass And Miscanthus RhizosphereNKQDFQPVLIAFLDVLHLDEEYWQNLAEYETAIARLEQITGLSLR
Ga0209238_101714913300026301Grasslands SoilVLTAFLDVLHLDAEYWQNLAEYETAIARLEQITGLSLR
Ga0209131_114695313300026320Grasslands SoilNRQDFPALLTSFLDVLHLDEEYWQNVAERETALARIEELTGLSLHEEERKQ
Ga0257154_100325213300026467SoilESLLSSFLDVLHLDEEYWQNTAERETALARLEQLTGLSLHDEGAKR
Ga0257157_102243013300026496SoilVLHLDEDYWQNMAEYETAVARIEQLTGLSLHDEGAK
Ga0209056_1031261823300026538SoilQSKKQDFQAVLTSFLDVLHLDEEYWRNLAEYETAIARLEQITGLSLR
Ga0179587_1004230113300026557Vadose Zone SoilDFSALLTSFLDVLHLDEEYWRSMAERETALAQIEQLTGLSLRGEGAKR
Ga0179587_1011794513300026557Vadose Zone SoilDVLHLDEDYWQNIAEYETAIARLEQLTGLSLREAGAKQ
Ga0209106_112085713300027616Forest SoilQGFQALLTAFLDVLHFDEEYWQNVSEYETAIARLEQITGLALR
Ga0209328_1013912623300027727Forest SoilDVLHLDEEYWKSLAERETALARLEQLTGLSLREEGPKK
Ga0209274_1012914623300027853SoilQSLLSSFLDVLHLDEEYWQNTAERETALARLEQLSGMSLHDEGTKR
Ga0209701_10006167123300027862Vadose Zone SoilTAFLDVLHLDEEYWQNVAEYETAIARLEQLTGLSLR
Ga0209579_1001767713300027869Surface SoilDVLHLDEEYWHDLSDRETALARLEELTGLSLREEGTQQ
Ga0209283_1073378213300027875Vadose Zone SoilLHLDEEYWKSIAEREAALARLEQLTGLSLRGEGAKR
Ga0209169_1051776223300027879SoilLLSSFLDVLHLDEEYWQKTAQREMALARLEQLTGMSLHDEGAKR
Ga0209488_1067268023300027903Vadose Zone SoilHLDEEYWQSAAERETALARLEELTGLSLREEGATR
Ga0209069_1104323413300027915WatershedsVLHLDEEYWQSAAERETALARLEELTGLSLHQEGTSK
Ga0209526_1046776723300028047Forest SoilLTAFLDVLHLDEDYWQNVAEYETAIARLEQLTGLSLRGEGAKR
Ga0308309_1130900023300028906SoilLQLDEEYWQSDAEREMALARLEELTGLSLREEGTSK
Ga0222749_1065266023300029636SoilAFLDVLHLDEDYWQNVAEYETAIARLEQLTGLSLREEGAKR
Ga0222749_1069510813300029636SoilLTSFLDVLHLDEEYWQSTAERETALARLEELTGLSLHEEGTNK
Ga0170822_1399212313300031122Forest SoilDFQAVLASFLDVLHLDEEYWKSIAERETALARLEQLTAMSLRGEEVRR
Ga0310686_11461225123300031708SoilQDFQGLLTSFLDVLHWDEEYWQSIADRETALARLEELTGLSLHEEGAKP
Ga0310686_11589542613300031708SoilFLDVLHLDEEYWKSIAERETALAQLEQLTGLSLRGEETKR
Ga0310686_11846034513300031708SoilQGLLASFLDVLHLDEEYWQSVADRETALAHLEELTGLSLREEGAIR
Ga0306918_1092824913300031744SoilQSNKQDFQAVLTAFLDVLHLDEDYWQNLAEYETAIARLEQITGLALR
Ga0318536_1038612923300031893SoilFQAVLAAFLDVLRFDEEYWQNLAEYETAIGRIEQITGLTLR
Ga0310912_1060921423300031941SoilLDVLQLDVEYWENLAERETALAQLEELTGLSLRDEGTQP
Ga0310910_1108102723300031946SoilVLTAFLDVLHLDEEYWQDLAGYETAIARLEQITGLSLR
Ga0310911_1012430713300032035SoilDFQAVLTAFLDVLRLDEEYWQNLAEYETAIGRIEQITGLTLR
Ga0318533_1048739323300032059SoilTAFLDVLHLDEEYWQNLAEYETAMGRIEQITGLSLR
Ga0318533_1057184923300032059SoilQDFQAVLAAFLDVLRFDEEYWQNLAEYETAIGRIEQITGLTLR
Ga0307471_10048771923300032180Hardwood Forest SoilQALLAAFLDVLHLDEDYWQNVAEYETSIARLEQITGLSLR
Ga0316624_1018231823300033486SoilLDVLQLDEGYWQSAAEYETALARVEELTGLSLRAEGARQ

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.