Metagenome Family F067094

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067094
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	79 residues
Representative Sequence	MHNVMSYTDWLRRQVSRLEEEIRLHSVFDSDRPASPTQLKELRSKVVIHTYLRQQLLRRETVVPSAEEYDTQEFVLVRKA
Number of Associated Samples	105
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	21.43 %
% of genes near scaffold ends (potentially truncated)	16.67 %
% of genes from short scaffolds (< 2000 bps)	68.25 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.032 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.698 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.476 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.74% β-sheet: 0.00% Coil/Unstructured: 59.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF00076	RRM_1	11.90
PF00069	Pkinase	9.52
PF00149	Metallophos	4.76
PF07676	PD40	4.76
PF03144	GTP_EFTU_D2	3.97
PF02146	SIR2	3.17
PF01546	Peptidase_M20	2.38
PF02954	HTH_8	1.59
PF00005	ABC_tran	1.59
PF01850	PIN	1.59
PF04255	DUF433	0.79
PF00092	VWA	0.79
PF08239	SH3_3	0.79
PF13584	BatD	0.79
PF01035	DNA_binding_1	0.79
PF11472	DUF3206	0.79
PF13620	CarboxypepD_reg	0.79
PF02698	DUF218	0.79
PF13360	PQQ_2	0.79
PF00801	PKD	0.79
PF05175	MTS	0.79
PF01288	HPPK	0.79
PF00144	Beta-lactamase	0.79
PF06580	His_kinase	0.79
PF01594	AI-2E_transport	0.79
PF13533	Biotin_lipoyl_2	0.79
PF03966	Trm112p	0.79
PF11655	DUF2589	0.79
PF12850	Metallophos_2	0.79
PF00487	FA_desaturase	0.79
PF03193	RsgA_GTPase	0.79
PF04545	Sigma70_r4	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	38.10
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	3.17
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.79
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.79
COG0801	7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (folate biosynthesis)	Coenzyme transport and metabolism [H]	0.79
COG1162	Ribosome biogenesis GTPase RsgA	Translation, ribosomal structure and biogenesis [J]	0.79
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.79
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.79
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.79
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.79
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.79
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.79
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.79
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.79
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.03 %
Unclassified	root	N/A	3.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.03 %
Unclassified	root	N/A	3.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.03 %
Unclassified	root	N/A	3.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	43.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.76 %
Unclassified	root	N/A	3.97 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	42.86 %
Unclassified	root	N/A	3.97 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.86 %
Unclassified	root	N/A	3.97 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.59 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.86 %
Unclassified	root	N/A	3.97 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.59 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.79 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.86 %
Unclassified	root	N/A	3.97 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.59 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.79 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.86 %
Unclassified	root	N/A	3.97 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.59 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.79 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.86 %
Unclassified	root	N/A	3.97 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.59 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.79 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100922134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1582	Open in IMG/M
3300000956\|JGI10216J12902_101564652	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300000956\|JGI10216J12902_111100103	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300002896\|JGI24802J43972_1006128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300003319\|soilL2_10210713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300004114\|Ga0062593_101811568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300004643\|Ga0062591_102527072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300005093\|Ga0062594_101217059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300005294\|Ga0065705_10212486	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300005295\|Ga0065707_10288789	All Organisms → cellular organisms → Bacteria → Proteobacteria	1030	Open in IMG/M
3300005295\|Ga0065707_10615696	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300005334\|Ga0068869_100989391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300005336\|Ga0070680_100021406	All Organisms → cellular organisms → Bacteria	5140	Open in IMG/M
3300005340\|Ga0070689_100266765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1416	Open in IMG/M
3300005340\|Ga0070689_100738327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300005343\|Ga0070687_100181811	All Organisms → cellular organisms → Bacteria → Proteobacteria	1260	Open in IMG/M
3300005353\|Ga0070669_101052772	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005354\|Ga0070675_100000002	All Organisms → cellular organisms → Bacteria	435215	Open in IMG/M
3300005356\|Ga0070674_101049947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300005364\|Ga0070673_101321256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300005441\|Ga0070700_100000089	All Organisms → cellular organisms → Bacteria	61717	Open in IMG/M
3300005466\|Ga0070685_10143956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1504	Open in IMG/M
3300005471\|Ga0070698_101532968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300005546\|Ga0070696_100663834	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300005615\|Ga0070702_100458804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300005719\|Ga0068861_100030762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3936	Open in IMG/M
3300005834\|Ga0068851_10744338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300006031\|Ga0066651_10000016	All Organisms → cellular organisms → Bacteria	53480	Open in IMG/M
3300006169\|Ga0082029_1003898	All Organisms → cellular organisms → Bacteria	9120	Open in IMG/M
3300006196\|Ga0075422_10009270	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3172	Open in IMG/M
3300006755\|Ga0079222_10202187	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300006844\|Ga0075428_100160432	All Organisms → cellular organisms → Bacteria	2441	Open in IMG/M
3300006844\|Ga0075428_101600023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300006845\|Ga0075421_100110233	All Organisms → cellular organisms → Bacteria	3459	Open in IMG/M
3300006854\|Ga0075425_100000478	All Organisms → cellular organisms → Bacteria	37840	Open in IMG/M
3300006871\|Ga0075434_100158677	All Organisms → cellular organisms → Bacteria	2282	Open in IMG/M
3300006871\|Ga0075434_101827850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300006876\|Ga0079217_10861549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300006876\|Ga0079217_10897780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300006876\|Ga0079217_11624880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300006918\|Ga0079216_10114227	All Organisms → cellular organisms → Bacteria → Acidobacteria	1337	Open in IMG/M
3300006918\|Ga0079216_10573577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300006918\|Ga0079216_10993964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300007004\|Ga0079218_12763876	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300007076\|Ga0075435_100189297	All Organisms → cellular organisms → Bacteria	1741	Open in IMG/M
3300009176\|Ga0105242_10012005	All Organisms → cellular organisms → Bacteria	6670	Open in IMG/M
3300010045\|Ga0126311_10215768	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300010400\|Ga0134122_10890453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	860	Open in IMG/M
3300010401\|Ga0134121_12855091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300010403\|Ga0134123_10001100	All Organisms → cellular organisms → Bacteria	17749	Open in IMG/M
3300010403\|Ga0134123_10554321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1094	Open in IMG/M
3300010403\|Ga0134123_10887605	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	896	Open in IMG/M
3300010403\|Ga0134123_10978873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300010403\|Ga0134123_11482617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300012035\|Ga0137445_1059567	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300012040\|Ga0137461_1019568	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300014310\|Ga0075331_1087218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300014488\|Ga0182001_10465692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300014871\|Ga0180095_1060927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300017965\|Ga0190266_10464798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300018422\|Ga0190265_13828052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300018429\|Ga0190272_10000054	All Organisms → cellular organisms → Bacteria	84045	Open in IMG/M
3300018432\|Ga0190275_10003028	All Organisms → cellular organisms → Bacteria	11959	Open in IMG/M
3300018465\|Ga0190269_10056226	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300018465\|Ga0190269_11744536	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300018466\|Ga0190268_10007777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2803	Open in IMG/M
3300018469\|Ga0190270_10000007	All Organisms → cellular organisms → Bacteria	218027	Open in IMG/M
3300018476\|Ga0190274_12452894	Not Available	619	Open in IMG/M
3300019356\|Ga0173481_10251020	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300019362\|Ga0173479_10444748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300019377\|Ga0190264_11381973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300019767\|Ga0190267_10854788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300020146\|Ga0196977_1010208	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2303	Open in IMG/M
3300020147\|Ga0196976_1000057	All Organisms → cellular organisms → Bacteria	72386	Open in IMG/M
3300020147\|Ga0196976_1121041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300020154\|Ga0196965_1158211	Not Available	586	Open in IMG/M
3300020181\|Ga0196958_10000444	All Organisms → cellular organisms → Bacteria	13490	Open in IMG/M
3300020202\|Ga0196964_10018233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2898	Open in IMG/M
3300021067\|Ga0196978_1059110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300021184\|Ga0196959_10202201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300021358\|Ga0213873_10000005	All Organisms → cellular organisms → Bacteria	416778	Open in IMG/M
3300022904\|Ga0247769_1063159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	970	Open in IMG/M
3300023268\|Ga0247765_1057596	Not Available	806	Open in IMG/M
3300024426\|Ga0196960_10010452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2333	Open in IMG/M
3300025289\|Ga0209002_10343202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300025321\|Ga0207656_10464996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300025728\|Ga0207655_1031174	Not Available	2462	Open in IMG/M
3300025917\|Ga0207660_10013781	All Organisms → cellular organisms → Bacteria	5305	Open in IMG/M
3300025918\|Ga0207662_10171746	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300025926\|Ga0207659_10000031	All Organisms → cellular organisms → Bacteria	121432	Open in IMG/M
3300025930\|Ga0207701_10178516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1874	Open in IMG/M
3300025934\|Ga0207686_10006754	All Organisms → cellular organisms → Bacteria	6179	Open in IMG/M
3300025937\|Ga0207669_10290282	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300026075\|Ga0207708_10000001	All Organisms → cellular organisms → Bacteria	467100	Open in IMG/M
3300026075\|Ga0207708_10597539	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300026306\|Ga0209468_1000005	All Organisms → cellular organisms → Bacteria	191762	Open in IMG/M
3300027640\|Ga0209347_1013968	All Organisms → cellular organisms → Bacteria	5031	Open in IMG/M
3300027691\|Ga0209485_1088212	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300027787\|Ga0209074_10119357	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300027886\|Ga0209486_10614917	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300027907\|Ga0207428_10000044	All Organisms → cellular organisms → Bacteria	198046	Open in IMG/M
3300027909\|Ga0209382_10367872	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300028578\|Ga0272482_10051889	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300028578\|Ga0272482_10196376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300028755\|Ga0307316_10392625	Not Available	513	Open in IMG/M
3300031164\|Ga0307502_10085868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300031455\|Ga0307505_10001441	All Organisms → cellular organisms → Bacteria → Proteobacteria	19204	Open in IMG/M
3300031740\|Ga0307468_101911535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300031740\|Ga0307468_102285731	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300031911\|Ga0307412_11618261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300032002\|Ga0307416_102470122	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300032002\|Ga0307416_103686852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300032126\|Ga0307415_102080953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300032180\|Ga0307471_100499627	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300034008\|Ga0334942_003811	All Organisms → cellular organisms → Bacteria	4293	Open in IMG/M
3300034009\|Ga0334944_005046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2554	Open in IMG/M
3300034025\|Ga0334940_108422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300034027\|Ga0334949_090167	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300034131\|Ga0334911_000668	All Organisms → cellular organisms → Bacteria	3690	Open in IMG/M
3300034135\|Ga0334929_117178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300034139\|Ga0334956_000376	All Organisms → cellular organisms → Bacteria	18634	Open in IMG/M
3300034145\|Ga0334963_000067	All Organisms → cellular organisms → Bacteria	77518	Open in IMG/M
3300034146\|Ga0334964_000079	All Organisms → cellular organisms → Bacteria	83373	Open in IMG/M
3300034760\|Ga0334948_002188	All Organisms → cellular organisms → Bacteria	6825	Open in IMG/M
3300034760\|Ga0334948_011908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1968	Open in IMG/M
3300034781\|Ga0334935_000905	All Organisms → cellular organisms → Bacteria	11225	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.78%
Host-Associated	Host-Associated	22.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.40%
Plants	Host-Associated → Plants	22.22%
Aquatic	Environmental → Aquatic	2.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.17%
Sediment	Environmental → Aquatic → Sediment	2.38%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.59%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.29%
Loam	Environmental → Terrestrial → Soil → Loam	10.32%
Sand	Environmental → Terrestrial → Soil → Sand	7.14%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	4.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.38%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.79%
Clay	Environmental → Terrestrial → Deep Subsurface → Clay	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.29%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.32%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	7.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.76%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	4.76%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.38%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.59%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Clay → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	8.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.94%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	7.14%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.56%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	4.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.97%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	3.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.17%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.38%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.59%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.59%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.79%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.79%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.79%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.79%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Clay → Unclassified → Deep Subsurface	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002896	Soil microbial communities from Manhattan, Kansas, USA - Sample 300um Nextera	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012035	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300014310	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014871	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_1Da	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300020147	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5-13C	Environmental	Open in IMG/M
3300020154	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_20	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300021067	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20-13C	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300022904	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L166-409R-6	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300024426	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025728	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300027640	Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/23 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034008	Biocrust microbial communities from Mojave Desert, California, United States - 38SMC	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034025	Biocrust microbial communities from Mojave Desert, California, United States - 36SMC	Environmental	Open in IMG/M
3300034027	Biocrust microbial communities from Mojave Desert, California, United States - 45SNC	Environmental	Open in IMG/M
3300034131	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMS	Environmental	Open in IMG/M
3300034135	Biocrust microbial communities from Mojave Desert, California, United States - 25HNC	Environmental	Open in IMG/M
3300034139	Biocrust microbial communities from Mojave Desert, California, United States - 52SNC	Environmental	Open in IMG/M
3300034145	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 59SNS	Environmental	Open in IMG/M
3300034146	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 60SNS	Environmental	Open in IMG/M
3300034760	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 44SMS	Environmental	Open in IMG/M
3300034781	Biocrust microbial communities from Mojave Desert, California, United States - 31SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1009221343	3300000956	Soil	SRNLFRPEPNMHNVMSYTDWLRKQVARLEAEIGSHSVFDSENPASTAQLKELRSKVVIHTYLRQQLLRRDTQVALEEYDTQEFVLVRKPA*
JGI10216J12902_1015646522	3300000956	Soil	MHSTMSYTDWLRSQTSRLEAEIRGHSVFDDATPATPAQLKELRKKVVIHTFLRQQLLRRDTLVPTAEEYDTQEFV
JGI10216J12902_1111001031	3300000956	Soil	MHNVMSYTDWLRRQTSRLEAEIASHSVFDSDTPATPAQLSELRKKVVIHTYLKQQLLRRETLAVATVEYDTQEFVLVRKA*
JGI24802J43972_10061282	3300002896	Soil	MHNIMSYTDWLRRQVSRLEEEIRLHSVFDSDRPASTTQLKELRSKVVIHTYLRQQLLRRETVVPSEEEYDTQEFVLVRKA*
soilL2_102107132	3300003319	Sugarcane Root And Bulk Soil	MSYTDWLRRQVERLENEIRSHSVFDSDTPASIADLKALRGKVVIHTYLRQQLLRREPVTVDAEEYDTQEFVVVRRA*
Ga0062593_1018115681	3300004114	Soil	MHSTMSYTDWLRNQTSRLEDEIRGHSVFDDDTPASPAQLKELRKKVVIHTFLRQQLLRRDTLVPTAEEYDTQEFVLVRKA*
Ga0062591_1025270722	3300004643	Soil	MSYTDWLRRQVQRLESEIRRHSVFDNESPATIGELRELRSKAVLHTYLRQQLLRREIARPVEEY
Ga0062594_1012170591	3300005093	Soil	NRLHFCHAVIRLTQPFPARTEYGMRMSYTDWLRRQVVRLESEIQRHSVFDSAKPASIAQLRELRAKAVIHTYLKQQLLRREVPQLDEEYETQEFVLVRK*
Ga0065705_102124862	3300005294	Switchgrass Rhizosphere	MHSIMSYTDWLRSQTSRLEDEIRRHSVFDDTTPASPAQLKELRAKVVIHTFLRQQLLRRNTLVTMEVDYETQEFVLVRKG*
Ga0065707_102887892	3300005295	Switchgrass Rhizosphere	MRMGYTDWLRRQVERLEDEIRWHSVFDSDHPATAEELKQLRAKVVVHTYMRQQLLRRDTVVPTAEEFETQEFVVVRRA*
Ga0065707_106156961	3300005295	Switchgrass Rhizosphere	IFPARPNMHSIMSYTDWLRSQTSRLEDEIRRHSVFDDTTPASPAQLKELRAKVVIHTFLRQQLLRRNTLVTMEVDYETQEFVLVRKG*
Ga0068869_1009893912	3300005334	Miscanthus Rhizosphere	MHNVMSYTEWLRRQVRRLEEEIRVHSVFDTDTPATPAELQALRAKVVIHTYLRQQLLRRDTIVALQEYDTQEYVVVKRA*
Ga0070680_1000214061	3300005336	Corn Rhizosphere	MSYTDWLRRQVTRLEEEIRRHSVFDTDTPATVAQLRELRAKAVIHTFLKQQLLRRETVVVLAEEYDTQEFVLVRK*
Ga0070689_1002667651	3300005340	Switchgrass Rhizosphere	MSYTDWLRRQVSRLEEEIRAHSVFDTDMPATPAELHALRSKVVIHTYLRQQLLRRDTLVATEDYDTQEYVVVRRA*
Ga0070689_1007383272	3300005340	Switchgrass Rhizosphere	MRMSYTDWLRRQVARLESEIRRHSVFERESPASIAELRELRKKAVLHTYLKQQLTRREVVQVAVDAEEYETQEIVLVRR*
Ga0070687_1001818112	3300005343	Switchgrass Rhizosphere	MHSVMSYTDWLRRQVARLEEEIREHSVFESDRPATAGQLKELRRKVVIHTYLRQQLLRRETVRLLDEEYDTQEFVLVRRA*
Ga0070669_1010527722	3300005353	Switchgrass Rhizosphere	MHNVMSYTDWLRRQVSRLEDEIRVHNVFESDSPATAGQLSELRRKVVIHTYLRQQLLRRETVHLLDEEYDTQEFVLVRRA*
Ga0070675_10000000275	3300005354	Miscanthus Rhizosphere	VIGLTQPFPARTEYEVRMSYTNWLRRQVQRLESEIRRHSVFDNESPATIGELRELRSKAVLHTYLRQQLLRREIVRPVEEYETQEFVLVRK*
Ga0070674_1010499472	3300005356	Miscanthus Rhizosphere	MHNIMSYTQWLRRQVRRLEEEIRLHSVFDTDTPATPAELKALRAKVVIHTYLRQQLLRRDTVVTPIEVMQEYDTQEYVVVRRA*
Ga0070673_1013212562	3300005364	Switchgrass Rhizosphere	MSYTDWLRRQVKRLESEIRRHSVFDNESPATIGELRELRSKAVLHTYLRQQLLRREIARPVEEYETQEFVLVRR*
Ga0070700_10000008924	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRMSYTNWLRRQVERLEDEIQRHSVFDSAAPASISQLRELRAKSVLHTYLRQQLVRREPIAVPEEEYDTQEFVLVRK*
Ga0070685_101439562	3300005466	Switchgrass Rhizosphere	MHSVMSYTEWLRRQVSRLEEELQAHTIFESDSPATAGQLSELRRKVVIHTYLRQQLLRRETLHLLAEEY
Ga0070698_1015329682	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSYTNWLRRQVARLEDEIRRHSVFDSESPATPAQLRELRAKAVIHTFLKQQLLRRETVALDEEYDTQEFVLVRK*
Ga0070696_1006638342	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRMSYTDWLRRQVVRLESEIQRHSVFDSAKPASIAQLRELRAKAVIHTYLKQQLLRREVPQLDEEYETQEFVLVRK*
Ga0070702_1004588041	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VTFLTQPFSPRTEYDCMMSYTKWLRRQVGRLENDIRRHSVFESDSPATVAQLRELRTKAVLHTFMKQQLLRREVLQAEEYETQEIVLVRK*
Ga0068861_1000307624	3300005719	Switchgrass Rhizosphere	MESIMSYTDWLRRQVTRLEEEIRRHSVFDTDTPATVAQLRELRAKAVIHTFLKQQLLRRETVVVLAEEYDTQEFVLVRK*
Ga0068851_107443382	3300005834	Corn Rhizosphere	MSYTDWLRKQVERLEQTIRRHNVFDSDEPATIAELEELREKVVLHTYLRQQLLRRETVKQFDTQEFVLVRRNGVLEITEITR*
Ga0066651_1000001638	3300006031	Soil	MNRMMSYTNWLRRQVARLENDIRRHSVFESDSPATVAQLRELRTKAVLHTFMNQQLLRREVPQVEEYDTREIVLVRK*
Ga0082029_10038988	3300006169	Termite Nest	MCKPNMHNVMSYTDWLRKQVSRLEDEIRQNSVFDSENPATPGQLKELRGKVVIHTYLRQQLLRRDTQVALEEYDTQEFVTVRRA*
Ga0075422_100092702	3300006196	Populus Rhizosphere	MHSTMSYTDWLRSQTSRLEAEIRGHSVFDDAAPASPAQLKELRKKVVIHTFLRQQLLRRDTLVPTAEEYDTQEFVLVRKA*
Ga0079222_102021872	3300006755	Agricultural Soil	MHNIMSYTDWLRRQTSRLENEIRQHSVFDDDSPATSSQLRELRKKVVIHTYLRQQLLRRDTLVATELVMDEEYDTQEFVLVRKS*
Ga0075428_1001604323	3300006844	Populus Rhizosphere	MHRMSYTDWLRKQVERLEDEVRRHSIFDSETPATGAQLEQLRAKVVIHTYLRQQLLRREPILLADEEYDTQEFVVVRRA*
Ga0075428_1016000232	3300006844	Populus Rhizosphere	MSYTDWLRRQVSKLEQDLRACSVFDTDSPATPAELKALRSQVVIHTYLRQQLLRRETLAAIPAEEYDTQEFVVVRRA*
Ga0075421_1001102333	3300006845	Populus Rhizosphere	MHPMSYTDWLRRQVERLEDEIRRHSIFDSDTPATGAQLAELRKKVVIHTYLRQQLLRREPILLADEEYDTQEFVLVKRA*
Ga0075425_10000047821	3300006854	Populus Rhizosphere	VIAHLILAAMYTDWLRRQVARLEDEIRRHSVFESDAPATVLQLRELRAKVVIHRYLKQQLLRRDTRVELPEEVDTQEFVLVRKS*
Ga0075434_1001586773	3300006871	Populus Rhizosphere	MSYTDWLRRQVTRLEEDIRRHSVFDSESPATVAQLRELRAKAVIHTYLRQQLLRRETIQIEQYDTQEFVLVRK*
Ga0075434_1018278501	3300006871	Populus Rhizosphere	MMSYTKWLRRQVARLEQDIRRHSVFESDSPATVAQLRELRTKAVLHTFMKQQLLRREVLQAEEYDTREIVLVRK*
Ga0079217_108615492	3300006876	Agricultural Soil	DWLRSQTSRLEDEIRGHSVFDDATPASPAQLKELRKKVVIHTFLRQQLLRRDTLVPTAEEYDTQEFVLVRKG*
Ga0079217_108977801	3300006876	Agricultural Soil	LLAEPNMHNDMSYTDWLRKQVARLEAEIASHSVFDGENPATAGQLKELRSKVVIHTYLRQQLLRRDTQVAREEYDTQEFVVVRKRA*
Ga0079217_116248801	3300006876	Agricultural Soil	HVPGYTADASYGRMSYTDWLRRQVSRLEGEIRAHSVFDTDQPATPAELKSLRSKVVIHTYLRQQLLRRETITTGTEVQEYDTQEFVLVRR*
Ga0079216_101142271	3300006918	Agricultural Soil	LLAEPNMHNDMSYTDWLRKQVARLEAEIASHSVFDGENPATAGQLKELRSKVVIHTYLRQQLLRRDTAVSTAEYDTQEYVLVRKQA*
Ga0079216_105735772	3300006918	Agricultural Soil	MHSVMSYTDWLRRQVSRLEEELRACPVFDTDSPATPAELKALRSKVVIHTYLRQQLLRRETVTVHEEEYETQEFVLVRKA*
Ga0079216_109939641	3300006918	Agricultural Soil	MHSIMSYTDWLRRQTERLEDEIRRHSVFDEDMPASPAQLKELRRKVVIHTFLRQQLLRRDTLVPTAEEYDTQEFVLVRKA*
Ga0079218_127638761	3300007004	Agricultural Soil	MHSIMSYTDWLRSQTSRLEDEIRGHSVFDDATPASPAQLKELRKKVVIHTFLRQQLLRRDTLVPTAEEYDTQEFVLVRKG*
Ga0075435_1001892973	3300007076	Populus Rhizosphere	MYTDWLRRQVARLEDEIRRHSVFESDAPATVLQLRELRAKVVIHRYLKQQLLRRDTRVELPEEVDTQEFVLVRKS*
Ga0105242_100120055	3300009176	Miscanthus Rhizosphere	MSYTNWLRRQVARLEDEIRRHSVFDSESPATRSQLRELRAKAVIHTFLKQQLLRRETVVPDEEYDTQEFVLVRK*
Ga0126311_102157682	3300010045	Serpentine Soil	MHNVMSYTDWLRRQVARLEEEIRLNSIFDSESPASPAQLKELRAKVVIHTYLRQQLLRRDTQVFTEEYDTQPFVLVRRA*
Ga0134122_108904532	3300010400	Terrestrial Soil	MSYTDWLRRQVSRLEEEIRAHSVFESDSPATTGQLGELRRKVVIHTYLRQQLLRRETIQLLDEEYDTQEFVLVRRA*
Ga0134121_128550911	3300010401	Terrestrial Soil	MMSYTNWLRRQVGRLEQDIRRNSVFESDSPATVAQLRELRSKAVLHTFMKQQLLRREVPQVEEY
Ga0134123_1000110016	3300010403	Terrestrial Soil	MSYTNWLRRQVERLEDEIRRHSVFDSSMPASISQLRELRAKSVLHTYLRQQLLRRETVMISEDEYETQEFVVVRR*
Ga0134123_105543211	3300010403	Terrestrial Soil	MSYTNWLRRQVERLEEEIRRHSVFDSAAPASISQLRELRAKSVLHTYLRQQLLRRETVSVSEDEYETQEFVLVRR*
Ga0134123_108876051	3300010403	Terrestrial Soil	ARPHARYWPVMSYTDWLRRQVARLEDEIRRHSVFDSDAPASALQLKELRTKVVIHRYLKQQLLRRNTNILQLEEEIDTQEFVLVRKS*
Ga0134123_109788732	3300010403	Terrestrial Soil	RRQVSRLEEEIRESSVFDTDRPATPQELKSLRAKVVIHTYLKQQLLRRETVTVMAEELDTQEFVLVRK*
Ga0134123_114826172	3300010403	Terrestrial Soil	MSYTDWLRRQVVRLESEIQRHSVFDSAKPASIAQLRELRAKAVIHTYLKQQLLRREVPQLDEEYETQEFVLVRK*
Ga0137445_10595672	3300012035	Soil	MHSIMSYTDWLRSQTSRLEDEIRGHSVFDDATPASPEQLQELRRKVVIHTFLRQQLLRRDTLVPTAEEYDTQEFVLVRKA*
Ga0137461_10195681	3300012040	Soil	MTYTDWLRRQVSRLEREIRAHPVFDTDRPATPAELQSLRAKVAIHTYVKQQLLRRETVQIGAGVEEYDTQEFVVPR*
Ga0075331_10872182	3300014310	Natural And Restored Wetlands	MSYTDWLRRQASRLEEEIRAHSVFENDTPATPAELKALRSKVVIHTYLRQQLLRRETVTVNDEEYDTQEFVLVRRA*
Ga0182001_104656922	3300014488	Soil	MSYTDWLRNQVARLEEEIRAHSVFDNDRPASPVQLRELRSKVVIHTYLRQQLLRRETIQVPEEEYDTQEFVLVRRAQ*
Ga0180095_10609272	3300014871	Soil	MTYTDWLRRQVSRLEREIRAHSVFDTDCPATPAELRSLRSKVVLHTYLKQQPLRRETVQIGAGVEEYDTQEFVVVGR*
Ga0190266_104647981	3300017965	Soil	MHSIMSYTDWLRRQTERLEDEIRRHSVFDEDAPASPAQLRELRSKVVIHTYLRQQLLRRDTVVPTEEEYDTQEFVLVRKA
Ga0190265_138280521	3300018422	Soil	MHSIMSYTDWLRRQTERLEDEIRRHSVFEEDTPASPAQLRELRSKVVIHTYLRQQLLRRDTVVPTEEEYDTQEFVLVRKA
Ga0190272_1000005463	3300018429	Soil	MHNVMSYTDWLRRQVSRLEQEIRACSVFDTDSPATPAELKALRAKVVIHTYLKQQLLRREPVVVHEEEYDTQEFVLVRKA
Ga0190275_100030289	3300018432	Soil	MSYTDWLRRQVERLEEEIRRHSVFDSDNPATPGQLKELRSKVVIHTYLRQQLLRRQTVTVVEEEYDTQEFVVVRKA
Ga0190269_100562262	3300018465	Soil	MRTTMSYTDWLRNQVSRLEEEIRAHSVFDNDRPASPVQLRELRSKVVIHTYLRQQLLRRETISVPEEEYDTQEFVLVRRAQ
Ga0190269_117445362	3300018465	Soil	MSYTEWLRSQVARLEKEISRHSVFDSDTPASPSQLKELRSKVVIHTYLKQQLLRRDTVVLLDEEYDTQEYVIVRR
Ga0190268_100077772	3300018466	Soil	MSYTDWLRTQVSRLEKEISRHSVFESDSPASPAQLKELRSKVVIHTYLKQQLLRRETVQVGEEEYDTQEFVLVRRAQ
Ga0190270_1000000719	3300018469	Soil	MHNTMSYTDWLRRQVGRLEEEIRRHSVFDNDTPASPSQLKELRSKVVIHTYLKQQLLRRETVVVPDEEYETQEFVLVRKA
Ga0190274_124528941	3300018476	Soil	MHSIMSYTDWLRSQTSRLEDEIRRHSVFDDTRPATPEQLKELRKKVVIHTFLRQQLLRRDTLVPTAEEYDTQEFVLVRKA
Ga0173481_102510201	3300019356	Soil	MHSIMSYTDWLRRQTERLEDEIRRHSVFDEDAPASPAQLRELRAKVVIHTYLRQQLLRRDTNVPTEEEYDTQEFVLVRKA
Ga0173479_104447481	3300019362	Soil	MHNTMSYTDWLRRQTSRLEDEIRQHSVFDSDAPATAKQLKELRAKVVIHTYLRQQLLRRDTVVATEEEYDTQEFVLVRK
Ga0190264_113819732	3300019377	Soil	MHSIMSYTDWLRRQTERLEDEIRRHSVFDEDTPASPAQLRELHSKVVIHTYLRQQLLRRDTMVPTEEEYDTQEFVLVRR
Ga0190267_108547882	3300019767	Soil	MHNTMSYTDWLRRQVGRLEEEIRRHSVFDNDTPASPTQLKELRSKVVIHTYLKQQLLRRETVVIADEEYDTQEFVLVRRAQ
Ga0196977_10102082	3300020146	Soil	MHNVMSYTDWLRRQTSRLEAEIASHSVFDSDTPATPTQLSELRKKVVIHTYLKQQLLRRETLAVAAVEYDTQEFVLVRKA
Ga0196976_100005721	3300020147	Soil	MSYTDWLRRQVSRLEEEIRACSLFDTDSPATPAELKALRSKVVIHTYLRQQLLRREVLAAPPVTAEEYDTQEFVMVRRA
Ga0196976_11210412	3300020147	Soil	MSYTEWLRRQTARLEEDIRSHSVFDDEAPATAAQLAELRRKVVIHTYLRQQLLRRDTLVATAEEEYDTQEFVLVRRS
Ga0196965_11582111	3300020154	Soil	MHSVMSYTEWLRAQVARLEKEISRHSVFDSDSPASPAQLEELRSKVVIHTYLKQQLLRRETVQPGDEEYDTQEFVLVRRAQ
Ga0196958_100004444	3300020181	Soil	MHSTMSYTDWLRRQVETMEDEIRRHSVFDTDSPATAGQLRELRSKVVIHTYLKQQLLRRETIQTVAEEEHDTQEFVLVRRS
Ga0196964_100182331	3300020202	Soil	MSYTDWLRRQVARLEEEIRACSLFDTDSPATPAELKTLRAKVVIHTYLRQQLLRRETLAAAPAEEYDTQEFVIVRRA
Ga0196978_10591101	3300021067	Soil	HSTMSYTDWLRRQTTRLEEEIRSHSVFDDETPATPGQLKELRAKVVIHTYLRQQLLRRDTLTASTEEEYDTQEFVLVRRS
Ga0196959_102022011	3300021184	Soil	MTYTEWLRRQVARLEEEIRASSVFETDSPATPAELKALRSKVVIHTYLRQQLLRRGTVTVHEEEYDTQEFVIVRRA
Ga0213873_1000000558	3300021358	Rhizosphere	MHNVMSYTDWLRRQVERLEDEIRRHSVFDSDRPASMVQLRELRSKVVIHTYLRQQLLRRETPVVLDEEYDTQEFVVVRRAQ
Ga0247769_10631593	3300022904	Plant Litter	MRYTQWLRRQVERLETEIREHSVFTSDAPATASELRELRTKSVIHTFLKQQLLRREPCKPDMPEVDTQEFVLVRR
Ga0247765_10575961	3300023268	Plant Litter	LRGVMSYRNWLRKQVERLESEIRADSIFETDSPPSREELRELREKVVVHTYLRQQLLRRETVRT
Ga0196960_100104522	3300024426	Soil	MHNTMSYTDWLRRQVERLEEEIRRHSVFDNDTPASPRQLKELRSKVVIHTYLKQQLLRRETVVVADEEYETQEFVLVRR
Ga0209002_103432021	3300025289	Soil	KRVTLLTQLRHARTEYSWRMTYTDWLRRKVTRLEEEIRAHSVFETDSPATPEELKALRSKVVIHTYLRQQLLRRETIDVSVEEYDTQEFVLVRKV
Ga0207656_104649962	3300025321	Corn Rhizosphere	MSYTDWLRKQVERLEQTIRRHNVFDSDEPATIAELEELREKVVLHTYLRQQLLRRETVKQFDTQEFVLVRRNGVLEITEITR
Ga0207655_10311742	3300025728	Miscanthus Rhizosphere	MSYTNWLRRQVQRLESEIRRHSVFDNESPATIGELRELRSKAVLHTYLRQQLLRREIVRPVEEYETQEF
Ga0207660_100137811	3300025917	Corn Rhizosphere	MSYTDWLRRQVTRLEEEIRRHSVFDTDTPATVAQLRELRAKAVIHTFLKQQLLRRETVVVLAEEYDTQEFVLVRK
Ga0207662_101717462	3300025918	Switchgrass Rhizosphere	MHSVMSYTDWLRRQVARLEEEIREHSVFESDRPATAGQLKELRRKVVIHTYLRQQLLRRETVRLLDEEYDTQEFVLVRRA
Ga0207659_1000003145	3300025926	Miscanthus Rhizosphere	VIGLTQPFPARTEYEVRMSYTNWLRRQVQRLESEIRRHSVFDNESPATIGELRELRSKAVLHTYLRQQLLRREIVRPVEEYETQEFVLVRK
Ga0207701_101785162	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MHTVMSYTEWLRRQVSRLEEDLQAHTVFESDSPATAGQLSELRRKVVIHTYLRQQLLRRETLHLLAEEYDTQEFVLVRRA
Ga0207686_100067546	3300025934	Miscanthus Rhizosphere	MSYTNWLRRQVARLEDEIRRHSVFDSESPATRSQLRELRAKAVIHTFLKQQLLRRETVVPDEEYDTQEFVLVRK
Ga0207669_102902822	3300025937	Miscanthus Rhizosphere	MHNIMSYTQWLRRQVRRLEEEIRLHSVFDTDTPATPAELKALRAKVVIHTYLRQQLLRRDTVVTPIEVMQEYDTQEYVVVRRA
Ga0207708_100000017	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRMSYTNWLRRQVERLEDEIQRHSVFDSAAPASISQLRELRAKSVLHTYLRQQLVRREPIAVPEEEYDTQEFVLVRK
Ga0207708_105975391	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MHSIMSYTDWLRSQTSRLEDEIRGHSVFDDATPATAEQLKELRKKVVIHTFLRQQLLRRDTLVSTAEEYDTQEFVLVRR
Ga0209468_100000596	3300026306	Soil	MNRMMSYTNWLRRQVARLENDIRRHSVFESDSPATVAQLRELRTKAVLHTFMNQQLLRREVPQVEEYDTREIVLVRK
Ga0209347_10139682	3300027640	Deep Subsurface	MSYTNWLRRQVQKLEAEIGRTSIFDTAAPPTARDLQELRSKVVIHTYLKQQLLRRETITPVADDEEFDTQEFLIRRTG
Ga0209485_10882121	3300027691	Agricultural Soil	LLAEPNMHNDMSYTDWLRKQVARLEAEIASHSVFDGENPATAGQLKELRSKVVIHTYLRQQLLRRDTAVSTAEYDTQEYVLVRKQA
Ga0209074_101193572	3300027787	Agricultural Soil	MHNIMSYTDWLRRQTSRLENEIRQHSVFDDDSPATSSQLRELRKKVVIHTYLRQQLLRRDTLVATELVMDEEYDTQEFVLVRKS
Ga0209486_106149171	3300027886	Agricultural Soil	MHSIMSYTDWLRSQTSRLEDEIRGHSVFDDATPASPAQLKELRKKVVIHTFLRQQLLRRDTLVPTAEEYDTQEFVLVRKG
Ga0207428_1000004492	3300027907	Populus Rhizosphere	MHSTMSYTDWLRSQTSRLEAEIRGHSVFDDAAPASPAQLKELRKKVVIHTFLRQQLLRRDTLVPTAEEYDTQEFVLVRKA
Ga0209382_103678722	3300027909	Populus Rhizosphere	MHPMSYTDWLRRQVERLEDEIRRHSIFDSDTPATGAQLAELRKKVVIHTYLRQQLLRREPILLADEEYDTQEFVLVKRA
Ga0272482_100518892	3300028578	Soil	MHNVMSYTDWLRRQVSRLEEEIRLHSVFDSDRPASPTQLKELRSKVVIHTYLRQQLLRRETVVPSAEEYDTQEFVLVRKA
Ga0272482_101963762	3300028578	Soil	QPNMHNVMSYTDWLRKQVSRLEDEIRESSIFDSENPATPGQLKELRARVVIHTYLRQQLLRRDTVVALEEYDTQEYVTVRRA
Ga0307316_103926251	3300028755	Soil	MHSIMSYTDWLRSQTSRLEAEIRGHSVFDDATPASPAQLKELRKKVVIHTFLRQQLLRRDTLVPSAEEYDTQEFVLVRKA
Ga0307502_100858682	3300031164	Soil	MHNVMSYTDWLRRQVSRLEQEIRACSVFDTDSPATPAELKALRAKVVIHTYLRQQLLRREPVVVHEEEYDTQEFVLVRKA
Ga0307505_100014419	3300031455	Soil	MTYTDWLRRQVSRLEREIRAHSVFDTDLPATPSELLSLRSKVVIHTYLKQQLLRRETVQIAPGSVEEYDTQEFVVVRR
Ga0307468_1019115352	3300031740	Hardwood Forest Soil	ARTEYVMRMSYTDWLRRQVARLESEIRRHSVFERESPASIAELRELRKKAVLHTYLKQQLTQRGVVQVAADAEEYETQEIVLVRR
Ga0307468_1022857312	3300031740	Hardwood Forest Soil	MHSTMSYTDWLRSQTSRLEAEIRGHSIFDDATPASPTQLKELRKKVVIHTFLRQQLLRRDTLVPTAEEYDTQEFVLVRKA
Ga0307412_116182612	3300031911	Rhizosphere	MSYTDWLRRQVTRLEEEIRACSLFETDSPATPAELQALRAKVVIHTYLRQQLLRRETVAVLEEEYDTQEFVLVRAPRAQP
Ga0307416_1024701222	3300032002	Rhizosphere	MSYTDWLRRQVSRLEQEIRACSVFDTDSPATPAELKALRAKVVIHTYLKQQLLRRETVVAGEEEYDTQEFVLVRRAASH
Ga0307416_1036868522	3300032002	Rhizosphere	MHSIMSYTDWLRRQTERLEDEIRRHSVFDEDTPASPAQLRELRAKVVIHTYLRQQLLRRDTEVALAEYDTQEFVIVRKRA
Ga0307415_1020809532	3300032126	Rhizosphere	MHPVMSYTNWLRKQVARLEQEIGTHSVFESASPATTSDLEELRSRVVLHTYLRQQLLRRETLVAAPALPIAEDADTQEFVIVRRA
Ga0307471_1004996272	3300032180	Hardwood Forest Soil	MHSTMSYTDWLRSQTSRLEAEIRGHSVFDDVTPATPAQLKELRKKVVIHTFLRQQLLRRDTLVPTAEEYDTQEFVLVRKA
Ga0334942_003811_3919_4161	3300034008	Biocrust	MHAVMSYTDWLRRQVSRLEQEIRACSVFDTDSPATAAELKALRAKVVIHTYLKQQLLRRETVAVHAEEYDTQEFVLVRKA
Ga0334944_005046_2232_2465	3300034009	Sub-Biocrust Soil	MSYTDWLRAQVARLEEEIRRHSVFDSDRPASAGQLKELRSKVVIHTYLRQQLLRRETIVAPEEEYDTQEYVMVRSAR
Ga0334940_108422_8_247	3300034025	Biocrust	MSYTDWLRRQVSRLEAEIRACSLFDTDSPATPTELKALRSKVVIHTYLRQQLLRREVLAAAPAMVEEYDTQEFVVVRRA
Ga0334949_090167_629_817	3300034027	Biocrust	MSYTDWLRRQAEKLEEEIGGHSVFDSERPASAAQLAELRAKVVIHTYLKQQLLRRETVVARDE
Ga0334911_000668_2934_3173	3300034131	Sub-Biocrust Soil	MRYTQWLRQQVERLEAEIREHHVFSTGDPATAGELRELRTKVVIHTFLRQQLLRREPAVAIEDEVDTQEFVLVRNHVGR
Ga0334929_117178_244_477	3300034135	Hypolithic Biocrust	MSYTDWLRNQVERLEAEIRAHSVFDNDRPASPVQLRELRSKVVIHTYLRQQLLRRETIAVPDEEYDTQEFVLVRRAQ
Ga0334956_000376_17016_17243	3300034139	Biocrust	MSYTNWLRKQVERLEQEIRRHSVFDTDSPATPRQLKELRSKVVIHTYLRQQLLRREPVLPQVEELDTQEFVLVRR
Ga0334963_000067_5663_5893	3300034145	Sub-Biocrust Soil	MSYTEWLRSQVARLEKEISRHSVFDNDSPASPAQLRELRSKVVIHTYLKQQLLRRETVQVGEEEYDTQEFVLVRRA
Ga0334964_000079_16058_16282	3300034146	Sub-Biocrust Soil	MSYTNWLRRQVERLEAEIRRHSVFDNDVPASAQQLKELRSKVVIHTYLRQQLLRREPLLPEEYDTQEFVLARRN
Ga0334948_002188_6120_6362	3300034760	Sub-Biocrust Soil	MHNTMSYTDWLRRQVGRLEEEIRRHSVFDNDTPASPAQLKELRSKVVIHTYLKQQLLRRETVVVADEEYETQEFVLVRKA
Ga0334948_011908_168_416	3300034760	Sub-Biocrust Soil	MKRMSYTDWLRRQVSRLEAEIRACSLFDTDSPATPTELKALRSKVVIHTYLRQQLLRREVLAAAPAMVEEYDTQEFVVVRRA
Ga0334935_000905_509_793	3300034781	Biocrust	VTRLTQPSPRVTEYPTTMSYTDWLRAQVGRLEEEIGRHSVFDSDRPASPAQLEELRSKVVIHRYLKQQLLRRDTMMPLEEEYDTQEFVLVRRAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067094

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences