Metagenome / Metatranscriptome Family F067244

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067244
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	56 residues
Representative Sequence	MCLTCGCLLPHEDHGNPDYLTIEGLEKSAKLDSLGLDEAVQILIKTVEVAKNEPDHQHR
Number of Associated Samples	91
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.46 %
% of genes near scaffold ends (potentially truncated)	16.67 %
% of genes from short scaffolds (< 2000 bps)	78.57 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.921 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.635 % of family members)
Environment Ontology (ENVO)	Unclassified (23.016 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.270 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.89% β-sheet: 2.30% Coil/Unstructured: 67.82%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.93.1.1: L-arabinose binding protein-like	d1dp4a_	1dp4	0.5757
c.41.1.1: Subtilases	d1r6va1	1r6v	0.5741
c.14.1.3: Crotonase-like	d1dcia_	1dci	0.57278
c.14.1.0: automated matches	d7bora_	7bor	0.56905
c.14.1.0: automated matches	d4jota1	4jot	0.56875

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF01152	Bac_globin	4.76
PF00578	AhpC-TSA	3.17
PF04193	PQ-loop	3.17
PF02325	YGGT	3.17
PF09948	DUF2182	2.38
PF05532	CsbD	1.59
PF00296	Bac_luciferase	1.59
PF10017	Methyltransf_33	1.59
PF07690	MFS_1	1.59
PF00300	His_Phos_1	1.59
PF00456	Transketolase_N	0.79
PF00496	SBP_bac_5	0.79
PF00923	TAL_FSA	0.79
PF00583	Acetyltransf_1	0.79
PF08281	Sigma70_r4_2	0.79
PF05138	PaaA_PaaC	0.79
PF00155	Aminotran_1_2	0.79
PF04542	Sigma70_r2	0.79
PF00174	Oxidored_molyb	0.79
PF01738	DLH	0.79
PF13602	ADH_zinc_N_2	0.79
PF04954	SIP	0.79
PF01402	RHH_1	0.79
PF00486	Trans_reg_C	0.79
PF11155	DUF2935	0.79
PF09990	DUF2231	0.79
PF03737	RraA-like	0.79
PF13518	HTH_28	0.79
PF04972	BON	0.79
PF13360	PQQ_2	0.79
PF00111	Fer2	0.79
PF03640	Lipoprotein_15	0.79
PF04286	DUF445	0.79
PF00378	ECH_1	0.79
PF08713	DNA_alkylation	0.79
PF00355	Rieske	0.79
PF01288	HPPK	0.79
PF01212	Beta_elim_lyase	0.79
PF01904	DUF72	0.79
PF08534	Redoxin	0.79
PF02897	Peptidase_S9_N	0.79
PF12681	Glyoxalase_2	0.79
PF10012	DUF2255	0.79
PF01252	Peptidase_A8	0.79
PF00753	Lactamase_B	0.79
PF07087	DUF1353	0.79
PF07311	Dodecin	0.79
PF01544	CorA	0.79
PF12710	HAD	0.79
PF02913	FAD-oxidase_C	0.79
PF12051	DUF3533	0.79
PF04185	Phosphoesterase	0.79
PF12867	DinB_2	0.79
PF07685	GATase_3	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	4.76
COG0762	Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family	Posttranslational modification, protein turnover, chaperones [O]	3.17
COG0597	Lipoprotein signal peptidase	Cell wall/membrane/envelope biogenesis [M]	1.59
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	1.59
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.59
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	1.59
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	0.79
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.79
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.79
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.79
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.79
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	0.79
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.79
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.79
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.79
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.79
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.79
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.79
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.79
COG0801	7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (folate biosynthesis)	Coenzyme transport and metabolism [H]	0.79
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.79
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.79
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.79
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.79
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.79
COG1770	Protease II	Amino acid transport and metabolism [E]	0.79
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.79
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.79
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.79
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.79
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.79
COG2375	NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains	Inorganic ion transport and metabolism [P]	0.79
COG2733	Uncharacterized membrane-anchored protein YjiN, DUF445 family	Function unknown [S]	0.79
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.79
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	0.79
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.79
COG3396	1,2-phenylacetyl-CoA epoxidase, catalytic subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.79
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.79
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	0.79
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.79
COG4399	Uncharacterized membrane protein YheB, UPF0754 family	Function unknown [S]	0.79
COG4912	3-methyladenine DNA glycosylase AlkD	Replication, recombination and repair [L]	0.79
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.79
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.92 %
Unclassified	root	N/A	15.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.92 %
Unclassified	root	N/A	15.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.92 %
Unclassified	root	N/A	15.08 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.21 %
Unclassified	root	N/A	15.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.38 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.86 %
Unclassified	root	N/A	15.08 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.38 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	26.98 %
Unclassified	root	N/A	15.08 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.38 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.59 %

Name	Rank	Taxonomy	Distribution
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	26.98 %
Unclassified	root	N/A	15.08 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.38 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.59 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.79 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.79 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.79 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	26.98 %
Unclassified	root	N/A	15.08 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.38 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.59 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.79 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.79 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.79 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	26.98 %
Unclassified	root	N/A	15.08 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.38 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.59 %
unclassified Micromonosporaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae	0.79 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.79 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.79 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	26.98 %
Unclassified	root	N/A	15.08 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.38 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.59 %
Micromonosporaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	0.79 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.79 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig121083	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
2124908032\|Perma_A_C_ConsensusfromContig34418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1412	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig112602	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig122117	Not Available	895	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig13193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	783	Open in IMG/M
2140918006\|ConsensusfromContig3748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	930	Open in IMG/M
3300000880\|AL20A1W_1030092	Not Available	1904	Open in IMG/M
3300001380\|JGI1356J14229_10043948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2346	Open in IMG/M
3300001537\|A2065W1_10316459	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300001538\|A10PFW1_11649321	Not Available	1519	Open in IMG/M
3300002028\|A17_1213572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	650	Open in IMG/M
3300004463\|Ga0063356_100902875	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300004633\|Ga0066395_10944555	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005167\|Ga0066672_10097933	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300005176\|Ga0066679_10170648	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300005435\|Ga0070714_101850462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	589	Open in IMG/M
3300005445\|Ga0070708_100003812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11828	Open in IMG/M
3300005467\|Ga0070706_100801335	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300005468\|Ga0070707_100031431	All Organisms → cellular organisms → Bacteria	5058	Open in IMG/M
3300005468\|Ga0070707_100282422	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300005468\|Ga0070707_100590202	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300005471\|Ga0070698_100000457	All Organisms → cellular organisms → Bacteria	43263	Open in IMG/M
3300005518\|Ga0070699_101511971	Not Available	615	Open in IMG/M
3300005529\|Ga0070741_10059725	All Organisms → cellular organisms → Bacteria	4458	Open in IMG/M
3300005536\|Ga0070697_101011126	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300005542\|Ga0070732_10000197	All Organisms → cellular organisms → Bacteria	48130	Open in IMG/M
3300005554\|Ga0066661_10672239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	609	Open in IMG/M
3300005764\|Ga0066903_103210357	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300005938\|Ga0066795_10110937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	816	Open in IMG/M
3300006034\|Ga0066656_10498614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	794	Open in IMG/M
3300006797\|Ga0066659_10579797	All Organisms → cellular organisms → Bacteria → Terrabacteria group	909	Open in IMG/M
3300006854\|Ga0075425_101764179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → unclassified Micromonosporaceae → Micromonosporaceae bacterium	695	Open in IMG/M
3300006864\|Ga0066797_1112585	Not Available	952	Open in IMG/M
3300006953\|Ga0074063_13000513	Not Available	627	Open in IMG/M
3300007004\|Ga0079218_11545776	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300007982\|Ga0102924_1044535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2689	Open in IMG/M
3300009012\|Ga0066710_101955580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	873	Open in IMG/M
3300009012\|Ga0066710_104451255	All Organisms → cellular organisms → Bacteria → Terrabacteria group	523	Open in IMG/M
3300009029\|Ga0066793_10418892	Not Available	768	Open in IMG/M
3300009038\|Ga0099829_10133372	Not Available	1968	Open in IMG/M
3300009038\|Ga0099829_10913009	Not Available	729	Open in IMG/M
3300009053\|Ga0105095_10347601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	817	Open in IMG/M
3300009088\|Ga0099830_10552624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	942	Open in IMG/M
3300009088\|Ga0099830_11812091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	510	Open in IMG/M
3300009089\|Ga0099828_10164466	All Organisms → cellular organisms → Bacteria → Proteobacteria	1967	Open in IMG/M
3300009089\|Ga0099828_10685398	All Organisms → cellular organisms → Bacteria → Terrabacteria group	921	Open in IMG/M
3300009089\|Ga0099828_11088082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	711	Open in IMG/M
3300009089\|Ga0099828_11179410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	679	Open in IMG/M
3300009089\|Ga0099828_11401694	Not Available	617	Open in IMG/M
3300009090\|Ga0099827_10002074	All Organisms → cellular organisms → Bacteria	10891	Open in IMG/M
3300009090\|Ga0099827_10574981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	971	Open in IMG/M
3300009137\|Ga0066709_100958731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1250	Open in IMG/M
3300009137\|Ga0066709_103095699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300009137\|Ga0066709_103830152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	546	Open in IMG/M
3300009137\|Ga0066709_104660406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	501	Open in IMG/M
3300009162\|Ga0075423_12196912	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300010391\|Ga0136847_10295731	All Organisms → cellular organisms → Bacteria	3214	Open in IMG/M
3300010391\|Ga0136847_11607104	All Organisms → cellular organisms → Bacteria	2414	Open in IMG/M
3300010391\|Ga0136847_12710278	Not Available	826	Open in IMG/M
3300011270\|Ga0137391_10374066	Not Available	1221	Open in IMG/M
3300011440\|Ga0137433_1210177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	638	Open in IMG/M
3300012010\|Ga0120118_1159137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	538	Open in IMG/M
3300012045\|Ga0136623_10004022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	5617	Open in IMG/M
3300012045\|Ga0136623_10084039	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300012045\|Ga0136623_10233206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	786	Open in IMG/M
3300012093\|Ga0136632_10318673	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300012201\|Ga0137365_10546350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300012201\|Ga0137365_10688822	All Organisms → cellular organisms → Bacteria → Proteobacteria	747	Open in IMG/M
3300012201\|Ga0137365_10764774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	705	Open in IMG/M
3300012206\|Ga0137380_10002732	All Organisms → cellular organisms → Bacteria	15090	Open in IMG/M
3300012206\|Ga0137380_10179777	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300012206\|Ga0137380_10364531	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300012207\|Ga0137381_11499535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	566	Open in IMG/M
3300012211\|Ga0137377_11625432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300012285\|Ga0137370_10687504	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300012354\|Ga0137366_10685024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	731	Open in IMG/M
3300012356\|Ga0137371_10712936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	767	Open in IMG/M
3300012931\|Ga0153915_10625402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1240	Open in IMG/M
3300013294\|Ga0120150_1006123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2706	Open in IMG/M
3300013765\|Ga0120172_1011488	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2823	Open in IMG/M
3300013768\|Ga0120155_1199327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	530	Open in IMG/M
3300013770\|Ga0120123_1021047	Not Available	1315	Open in IMG/M
3300013772\|Ga0120158_10009874	All Organisms → cellular organisms → Bacteria	8944	Open in IMG/M
3300014829\|Ga0120104_1056855	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300015371\|Ga0132258_12770927	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300015372\|Ga0132256_103089246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	560	Open in IMG/M
3300017787\|Ga0183260_10001635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18638	Open in IMG/M
3300017787\|Ga0183260_10436435	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300018031\|Ga0184634_10499063	Not Available	544	Open in IMG/M
3300018077\|Ga0184633_10031056	All Organisms → cellular organisms → Bacteria	2682	Open in IMG/M
3300018077\|Ga0184633_10239868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	933	Open in IMG/M
3300018422\|Ga0190265_10003363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10912	Open in IMG/M
3300018422\|Ga0190265_10048420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3685	Open in IMG/M
3300018422\|Ga0190265_10125037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2466	Open in IMG/M
3300018422\|Ga0190265_11733917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	734	Open in IMG/M
3300018422\|Ga0190265_12014717	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300018429\|Ga0190272_10052911	All Organisms → cellular organisms → Bacteria	2362	Open in IMG/M
3300018429\|Ga0190272_10386585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1134	Open in IMG/M
3300018468\|Ga0066662_10766931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	931	Open in IMG/M
3300021080\|Ga0210382_10067857	Not Available	1438	Open in IMG/M
3300022557\|Ga0212123_10095594	All Organisms → cellular organisms → Bacteria	2445	Open in IMG/M
3300025318\|Ga0209519_10113800	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300025725\|Ga0209638_1043027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1907	Open in IMG/M
3300025910\|Ga0207684_10000071	All Organisms → cellular organisms → Bacteria	185783	Open in IMG/M
3300025910\|Ga0207684_11578694	Not Available	532	Open in IMG/M
3300025922\|Ga0207646_10073336	All Organisms → cellular organisms → Bacteria	3058	Open in IMG/M
3300026326\|Ga0209801_1123905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1107	Open in IMG/M
3300027587\|Ga0209220_1118530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	691	Open in IMG/M
3300027815\|Ga0209726_10085940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1963	Open in IMG/M
3300027819\|Ga0209514_10019383	All Organisms → cellular organisms → Bacteria → Proteobacteria	6170	Open in IMG/M
3300027842\|Ga0209580_10000735	All Organisms → cellular organisms → Bacteria	16365	Open in IMG/M
3300027846\|Ga0209180_10068324	Not Available	1988	Open in IMG/M
3300027862\|Ga0209701_10399035	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300027882\|Ga0209590_10000023	All Organisms → cellular organisms → Bacteria	27976	Open in IMG/M
3300030006\|Ga0299907_10268977	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1397	Open in IMG/M
3300030619\|Ga0268386_10617812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	721	Open in IMG/M
3300030619\|Ga0268386_10820797	Not Available	592	Open in IMG/M
3300030620\|Ga0302046_11133234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	617	Open in IMG/M
3300031965\|Ga0326597_10525960	Not Available	1282	Open in IMG/M
3300033433\|Ga0326726_10561567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1095	Open in IMG/M
3300033433\|Ga0326726_12238938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	531	Open in IMG/M
3300033813\|Ga0364928_0092363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	706	Open in IMG/M
3300034090\|Ga0326723_0105079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1223	Open in IMG/M
3300034090\|Ga0326723_0240555	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300034164\|Ga0364940_0129574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	721	Open in IMG/M
3300034257\|Ga0370495_0206334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	635	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.03%
Host-Associated	Host-Associated	3.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.37%
Aquatic	Environmental → Aquatic	16.67%
Plants	Host-Associated → Plants	3.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.60%
Freshwater	Environmental → Aquatic → Freshwater	11.90%
Sediment	Environmental → Aquatic → Sediment	3.17%
Peat	Environmental → Terrestrial → Peat	3.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.38%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.59%
Floodplain	Environmental → Terrestrial → Floodplain	1.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.52%
Loam	Environmental → Terrestrial → Soil → Loam	11.90%
Ice	Environmental → Aquatic → Freshwater → Ice	4.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.17%
Lake	Environmental → Aquatic → Freshwater → Lake	2.38%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.59%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.13%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	14.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.52%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	4.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.17%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.38%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	2.38%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.59%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.59%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.73%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	7.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.56%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.76%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	2.38%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	2.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.38%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.38%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.79%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.79%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.79%
Permafrost And Active Layer Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost And Active Layer Soil	0.79%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.79%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2140918006	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300001380	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300002028	Permafrost and active layer soil microbial communities from McGill Arctic Research Station (MARS), Canada, for enrichment studies - Sample_A17	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034257	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_03539230	2124908032	Soil	MLPHDDHGNPDYLTIEDLEASAAADSMGLDEAVRNLVATVEVAKGETNHEHR
Perma_A_C_01571390	2124908032	Soil	MCLTCGCHLHHDNQGKPDYLLIEDLEKSAKLDRYSLDEAVRYLVETVKVAKKEPEHQHR
P3_CLC_01613650	2124908041	Soil	MLPHDDHGKPDYLTIEDLEASAAADSMGLDEAVRNLVATVEVAKGETNHEHR
P3_CLC_00058650	2124908041	Soil	MLPHDDHGNPDYLTIEDLEKSAKADNMGLDEAVSNLVKTVEIAKQETEHEHR
P3_CLC_00296830	2124908041	Soil	MCLTCGCHLPHDNRGKPDYLLIEDLEKSAKLDRYSLDEAVRYLVETVKVAKKEPEHQHR
P1_C_01518980	2140918006	Soil	MCLTCGCHLHHDNHGKPDYLLIEDLERSAKLDRYSLDEAVRYLVETVKVAKKEPEHQHR
AL20A1W_10300922	3300000880	Permafrost	MCLTCGCLEPHADHGNPDHLLIEHLEKSAKADGVDLDQAIKTLIETVDVAKKETEHKHV*
JGI1356J14229_100439483	3300001380	Groundwater	MCLTCGCLKPHENHGKEDYLTIEQFEKSAGLDNLGLDAAVENLKKTVEIAKKEGQHAHR*
A2065W1_103164592	3300001537	Permafrost	MCLTCGCMKPHDDHGNKDYLVIEQLERSAKLDKKSLDDALKTLTETVRVAKDETEHQHR*
A10PFW1_116493213	3300001538	Permafrost	MDWTEKEDTMCLTCGCMKPHDEHGSEDHLTIEDLEKSAAVDSMGLDEALANLVKTVDVAKGETEHQHG*
A17_12135722	3300002028	Permafrost And Active Layer Soil	MCLTCGCLLPHEDHGNREYLTIEGLERSAAIDGYDLDTALQNLAKTVEVAKKETDHDHR*
Ga0063356_1009028752	3300004463	Arabidopsis Thaliana Rhizosphere	MCLTCGCMLPHDDHNNPDYLTIEDLEKSAKADEMSLDEAVSNLLKTVEVAKRETDHKHR*
Ga0066395_109445552	3300004633	Tropical Forest Soil	MCLTCGCLEPHNPHGSRDHLLIEDLEKSARVDGLTLDQAVQNLIKTVEIAKKETEHHHA*
Ga0066672_100979332	3300005167	Soil	MCLTCGCLLPHEDHGNPDYLTIEGLEKSAKLDSLGLDEAVQILIKTVEVAKNEPDHQHR*
Ga0066679_101706483	3300005176	Soil	MCLTCGCMKPHDKHGKDAYLTIEELERSAQLDKLSLDEAVRNLSATVEVAK
Ga0070714_1018504621	3300005435	Agricultural Soil	MCLTCGCHLPHESHGKPDYLLIEHLERSAALDGYTLDEAVKYLVETVEVAKAEKEHQHK*
Ga0070708_10000381215	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MCLTCGCMLPHERHGNPDHLVIEDLEKSARLDKVNLDKAVDTLIKTVEVAKKEPGHQHR*
Ga0070706_1008013352	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MCLTCGCMRPHDDMGNPEHLTIEGLEKSAGLDGLDLDTAVQNLIKTVDVAKKETEHDHR*
Ga0070707_1000314313	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MCLTCGCLLPHDNHGKPDYLLIEDLEKSATLDSYSLDEAVANLVATVEVAKKESEHQHR*
Ga0070707_1002824222	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LTCGCVLPHEDHGNPDYLTIEGFEKSAKLDNLSLDEALENLIKTVEIAKREPGHDHR*
Ga0070707_1005902021	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MCLTCGCHLPHDDHGKPDYLLIEHLEKSAALDGYDLDTALKNLVETVEVAKKEAGHRHR*
Ga0070698_1000004574	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MCLTCGCMLPHERHGNPDHQVIEDLEKSARLDKVNLDKAVDTLIKTVEVAKKEPGHQHR*
Ga0070699_1015119711	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	NPDYLTIEDLERSAKADNMNLAEAVENLVKTVEVAKKETEHQHR*
Ga0070741_100597253	3300005529	Surface Soil	MCLTCGCKRPHDNHGKADYLTIEPLEKSARLDNLGLDEAVKNLIETVEVAKNETEHSHR*
Ga0070697_1010111261	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MCLTCGCMLPHEDHGNADYLTIEDLEKSAKLDGLDLRRAIDNLLEAVEIARQEQGHDHR*
Ga0070732_1000019724	3300005542	Surface Soil	MCLTCGCMLPHDRHGSQDHLIIEDLEKSARVDNMTLDKAVENLLLTIDVAKHEKGHHHR*
Ga0066661_106722392	3300005554	Soil	MCLTCGCLLPHEDHGNPDYLTIEGLEKSAKLDSLGLDEAVQILIKTVEVAKNEQDHQHR*
Ga0066903_1032103572	3300005764	Tropical Forest Soil	MCLTCGCMRPHDDMGNREHLIIEDLERSAKLDGLDLDAALQNLIKTVDVAKQETEHEHR*
Ga0066795_101109372	3300005938	Soil	MCLTCGCHLHHDNHGKPDYLLIEDLEKSAKLDRYSLDEAVRYLVETVKVAKKEPEHQHR*
Ga0066656_104986141	3300006034	Soil	MCLTCGCLLPHEDHGNPEYLTIEGLEKSAKLDNLNLDAAVGNLIKTVEVAKKETEHQHR*
Ga0066659_105797972	3300006797	Soil	MCLTCGCMQPHDDHGNPDYLTIEALEASAAADSMGLDEAVRNLVATVDVAKSETEHDHH*
Ga0075425_1017641791	3300006854	Populus Rhizosphere	MCLTCGCMLPHEDHGNPEYLTIEGLEKSAAVDGYDLDTAVQILIKTVDVAKKETEHSHR*
Ga0066797_11125852	3300006864	Soil	MLPHDDHGNPDYLTIEDLEKSAKADNMSLDEAVSNLKATVEIAKRETEHEHR*
Ga0074063_130005132	3300006953	Soil	DDHGNPDYLTIEGLERSAGADSMGLDEAVRNLIATVEVAKAEGEHEHR*
Ga0079218_115457761	3300007004	Agricultural Soil	MCLTCGCMLPHEDHGNPDYLLIEHLEKSAKIDGIDLDEAVQRLIKTVEVAKQET
Ga0102924_10445353	3300007982	Iron-Sulfur Acid Spring	MLPHERHGNPDHLVIEDLEKSARLDKVNLDQAVDTLVKTVQVAKKEPGHQHG*
Ga0066710_1019555801	3300009012	Grasslands Soil	VRMCLTCGCLLPHEDHGNPEYLTIEGLERSAALDGYDLDTALQNLINTVEVAKKETEHGH
Ga0066710_1044512551	3300009012	Grasslands Soil	MCLTCGCMQPHDDHGNPDYLTIEALEASAAADSMGLDEAVRNLVATVDVAKSETEHDHH
Ga0066793_104188922	3300009029	Prmafrost Soil	MPPHDDHGNPDYLTIEDLEKSAKADNMSLDEAVSNLKATVEIAKRETEHEHR*
Ga0099829_101333722	3300009038	Vadose Zone Soil	MCLTCGCLLPHEDHGNPDYLTIEGLEKSARLDNLALDDAVQMLVKTVEVAKNEPDHQHR*
Ga0099829_109130092	3300009038	Vadose Zone Soil	MLPHDAHGNPDYLTIEDLEMSAAADSIGLDEAVRNLVATVEVAKGEPDHEHR*
Ga0105095_103476012	3300009053	Freshwater Sediment	MCLTCGCLLPHEKHGKAGYLTIEDLEKSAEIDGYTLDEAIKNLLKTVEVAQKEPEHQHK*
Ga0099830_105526241	3300009088	Vadose Zone Soil	LPHESHGKADYLLIEDLEKSAKLDGYTLDEAVRHLIDTVEVAKKEPDHHHN*
Ga0099830_118120911	3300009088	Vadose Zone Soil	MLPHDAHGNPDYLTIEDLEMSAAADSIGLDEAVRNLVATVEVAKGEPDHEH
Ga0099828_101644663	3300009089	Vadose Zone Soil	EDHGNPDYLTIEGLEKSARLDNLALDDAVQMLVKTVEVAKNEPDHQHR*
Ga0099828_106853982	3300009089	Vadose Zone Soil	MQPYADTGHPDYRTIDDLEASSAADSMGLDEAVRNLVATVDLAKAETEHEHR*
Ga0099828_110880821	3300009089	Vadose Zone Soil	LPHEDHGNPEYLTIEGLERSAALDDYDLDTALQNLIKTVDIATEETEHDHR*
Ga0099828_111794101	3300009089	Vadose Zone Soil	MLPHEGHGKAEYLTVEDLEASATLDNYSLDEAVKNLLATVEVAKKEPGHQHR*
Ga0099828_114016942	3300009089	Vadose Zone Soil	VCLTCGCLLPHEDHGNPDYLTIEGLEKSAKLDNLTLDEAVQILIRTVEVAKNETEHNHR*
Ga0099827_100020746	3300009090	Vadose Zone Soil	MCLTCGCRLPHESHGKADYLLIEDLEKSAKLDGYTLDEAVRHLIDTVEVAKKEPDHHHN*
Ga0099827_105749811	3300009090	Vadose Zone Soil	MLPHDDHGNPDYLTIEDLEASAAADSMGLDEAVRNLVATVEIAKEEPDHEHR*
Ga0066709_1009587312	3300009137	Grasslands Soil	LLPHEDHGNPDYLTIEGLEKSAQLDNLALDDAVQILIKTVEVAKNEPGHQHR*
Ga0066709_1030956991	3300009137	Grasslands Soil	MCLTCGCLFQQEDQGNPDYLTIEGLEKSAKLDSLGLDEAVQILIKTVEVAKNEPDHQHR*
Ga0066709_1038301522	3300009137	Grasslands Soil	MQPHDDHGNPDYLTIEALEASAAADSMGLDEAVRNLVATVDVAKSETEHDHH*
Ga0066709_1046604061	3300009137	Grasslands Soil	MVRLFGKGGESSMCLTCGCLLPHEDHGNPEYLTIEGLERSAALDGYDLDTALQNLIKTVEVAKEETEHDHR*
Ga0075423_121969122	3300009162	Populus Rhizosphere	MKPHEDHGKDEYLTIEDLEASARLDEMSLDDAVRNLVKTVDVAKKEQAHQHR*
Ga0136847_102957311	3300010391	Freshwater Sediment	MLPHDKHDNPAYLIIEDLERSAKADSMSLDEAVQNLIKTVEVAKKETEHQHR*
Ga0136847_116071045	3300010391	Freshwater Sediment	MCLTCGCMMPHDDHGNSDYLTIENLEKSARADKMNLDEAVANLVKTVDVAKRETEHDHR*
Ga0136847_127102783	3300010391	Freshwater Sediment	MKPHDTHGNPDYLTIEHLEKAAKLDNLSLDNAVENLRKTVEVAKAEPQHQHR*
Ga0137391_103740661	3300011270	Vadose Zone Soil	PSASREEVVSMCLTCGCLLPHEDHGNPDYLTIEGLEKSARLDNLALDDAVQMLVKTVEVAKNEPDHQHR*
Ga0137433_12101772	3300011440	Soil	RHERRREMCLTCGCKLPHEDHGKTEYLTIEDLERSAAVDSYSLDEAMKNLVATVDVAKGEAEHQHR*
Ga0120118_11591372	3300012010	Permafrost	SAMCLTCGCLLPHEDHGNREYLTIEGLERSAAIDGYDLDTALQNLAKTVEVAKKETDHDHR*
Ga0136623_100040227	3300012045	Polar Desert Sand	MLPHDDHGKSGYLTIDELEQSAEIDDYTLDQAVANLVKTVEVAKREVDHQHT*
Ga0136623_100840392	3300012045	Polar Desert Sand	MLPHDDHGKSGYLTIEDLEQSAKIDDYTLDQSVANLVKTVEVAKREVDHQHT*
Ga0136623_102332062	3300012045	Polar Desert Sand	MLPHDDHGKSGYLTIDQLEQSAKIDDYTLDQAVANLVKTVEVAKQEVDHQHT*
Ga0136632_103186731	3300012093	Polar Desert Sand	MLPHEDHGKPDYLTIEGLEKSAKLDDLGLDEAVKNLIATVDVAKKETEHEHS*
Ga0137365_105463501	3300012201	Vadose Zone Soil	LPHEDHGNPEYLTIEGLEKSAAIDGYDLDTAVQNLVKTVDAA
Ga0137365_106888222	3300012201	Vadose Zone Soil	MLPHEDHGNPDYLLIEHLERSARIDGIGLDEATDRLIKTVQVAK*
Ga0137365_107647741	3300012201	Vadose Zone Soil	MLPHDDHGNPDYLTIEDLETSAAADSMGLDEAVRNLVATVEVAKGETDHEHR*
Ga0137380_1000273212	3300012206	Vadose Zone Soil	MLPHEDHGNPEYLTIEGLEKSASLDGYDLDTAVQNLIKTVEVAKKETGHDHR*
Ga0137380_101797774	3300012206	Vadose Zone Soil	LLPHEDHGNPDYLTIEGLEKSAALDGLSLDEAVQMLVKTVEVAKQESHHQHR*
Ga0137380_103645313	3300012206	Vadose Zone Soil	LPHEDHGNPEYLTIESLERSAALDGYDLDAALQNLIKTVAVAKEETEHEHR*
Ga0137381_114995352	3300012207	Vadose Zone Soil	MLPHEDHGNPDYLLIEHLERSARIDGRGLDEATDRLLKTVQVAKEETEHDHH*
Ga0137377_116254322	3300012211	Vadose Zone Soil	MCLTCGCLLPHEDHGNHEYLTIEGLERSAAIDGYDLDTALQNLVKTVEVAKKETDHDHR*
Ga0137370_106875042	3300012285	Vadose Zone Soil	MQPHDDHGNPDYLTIEALEASAAADSMGLDEAVRNLVATVDVAKGETEHEHR*
Ga0137366_106850241	3300012354	Vadose Zone Soil	MCLTCGCLLPHEDHGNREYLTIEGLERSAAIDGYDLDTALQNLVKTVEVAKKETDHDHR*
Ga0137371_107129361	3300012356	Vadose Zone Soil	MCLTCGCLLPHDDHGNPDYLTIEDLETSAAADSMGLDEAVRNLVATVEV
Ga0153915_106254022	3300012931	Freshwater Wetlands	MLPHDDHGNPDYLTIEDLETSAAADSMGLDQAVRNLVATVEVAKGEADHEHR*
Ga0120150_10061233	3300013294	Permafrost	MFLTCGCLLPHEDHGNREYLTIEGLERSAAIDGYDLDTALQNLAKTVEVAKKETDHDHR*
Ga0120172_10114882	3300013765	Permafrost	MCLTCGCLLPHEDHGNREYLTIEGLKRSAAIDGYDLDTALQNLAKTVEVAKKETDHDHR*
Ga0120155_11993271	3300013768	Permafrost	MCLTCGCLLPHEDHGNPEYLTIEGLERSAAIDAYDLDTALQNLIKTVDVAKKETGHDHR*
Ga0120123_10210472	3300013770	Permafrost	LPHEDHGNREYLTIEGLERSAAIDGYDLDTALQNLAKTVEVAKKETDHDHR*
Ga0120158_1000987410	3300013772	Permafrost	MKPHDEHGSEDHLTIEDLEKSAAVDSMGLDEALANLVKTVDVAKGETEHQHG*
Ga0120104_10568552	3300014829	Permafrost	MCLTCGCLEPHADHGNPDHLLIEHLEKSAKADGVDLDQAIKTLIETVDVARKETEHKHV*
Ga0132258_127709272	3300015371	Arabidopsis Rhizosphere	LLPHDDHGNPEYLTIEDLEKSARADSMSLDEAVANLIKTVDVAPSRSNHHR*
Ga0132256_1030892461	3300015372	Arabidopsis Rhizosphere	LLPHDDHGNPEYLTIEDLEKSARADSMSLDEAVANLIKTVDVAPSR
Ga0183260_1000163521	3300017787	Polar Desert Sand	MCLTCGCNLPHEDHGKEGYLLIEDLERSAKKDDLSLDDAVKNLIATVEVAKQETEHEHR
Ga0183260_104364352	3300017787	Polar Desert Sand	MCLTCGCMLPHEDHGKPDYLTIEGLEKSAKLDDLGLDEAVKNLIATVDVAKKETEHEHS
Ga0184634_104990632	3300018031	Groundwater Sediment	MCLTCGCMEPHNNHGNPDYLTIEALEKSAKADNMKLDEAVQNLVKTVEVAKKETEHQHR
Ga0184633_100310566	3300018077	Groundwater Sediment	MCLTCGCMEPHDTHGNPDYLTIDDLEKSAKADNMSLDEAVQNLLKTVEVAKKETEHQHR
Ga0184633_102398682	3300018077	Groundwater Sediment	MCLTCGCMEPHNSHGNPDYLTIEDLEKSAKADNMKLHEAVQNLVRTVEVAKKETEHQHR
Ga0190265_100033633	3300018422	Soil	MCLTCGCLLPHEDHGKTGYLTIEDLEESAEIDGYTLDKALQNLIETVEVARNEEGHQHR
Ga0190265_100484204	3300018422	Soil	MCLTCGCLLPHEDHGKAGYLTIEDLEKSAEIDGFTLDEAIKNLVKTVEVAKKEGDHHHK
Ga0190265_101250374	3300018422	Soil	MCLTCGCLLPHEDHGKTAYLTIEDLEKSAEIDGYSLEQALQNLIDTVEVARNEADHQHR
Ga0190265_117339172	3300018422	Soil	MCLTCGCLLPHEDHGKTGYLTIEDLERSAEIDGYSLDQAVQNLVETVDVARHEEGHKHQ
Ga0190265_120147172	3300018422	Soil	YMCLTCGCMLPHEDHGKAGYLTIEDLEKSAEIDGYTLDEAVKNLLKTVELARKEPGHQHK
Ga0190272_100529115	3300018429	Soil	MCLTCGCLLPHDKHGKAGYLTIEDLEKSAEIDGYTLDEAIKNLLKTVEVARKEPEHQHQ
Ga0190272_103865852	3300018429	Soil	MCLTSGCLLPHENHGKAGYLTIEDLEKSAGIDGYTLDEALMNLVKTIEVGKKEGDHHHK
Ga0066662_107669312	3300018468	Grasslands Soil	MCLTCGCLLPHEDHGNPDYLTIEGLEKSAKLDSLGLDEAVQILIKTVEVAKNEPDHQHR
Ga0210382_100678572	3300021080	Groundwater Sediment	MCLTCGCMQPHDDHGNPDHLTIEALEASAAADSMGLDEAVRNLVATVDVAKGETEHEHR
Ga0212123_100955943	3300022557	Iron-Sulfur Acid Spring	MCLTCGCMLPHERHGNPDHLVIEDLEKSARLDKVNLDQAVDTLVKTVQVAKKEPGHQHG
Ga0209519_101138003	3300025318	Soil	MCLTCGCLLPHEDHGKTDYLTIEHLEASAVIDGYTLDEAVRNLVETVAVAKEEKNHQHH
Ga0209638_10430273	3300025725	Arctic Peat Soil	MCLTCGCHLHHDNHGKPDYLLIEDLEKSAKLDRYSLDEAVRYLVETVKVAKKEPEHQHR
Ga0207684_10000071180	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MCLTCGCMLPHERHGNPDHLVIEDLEKSARLDKVNLDKAVDTLIKTVEVAKKEPGHQHR
Ga0207684_115786942	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MCLTCGCMRPHDDMGNPEHLTIEGLEKSAGLDGLDLDTAVQNLIKTVDVAKKETEHDHR
Ga0207646_100733364	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MCLTCGCLLPHDNHGKPDYLLIEDLEKSATLDSYSLDEAVANLVATVEVAKKESEHQHR
Ga0209801_11239052	3300026326	Soil	MCLTCGCLLPHEDHGNPDYLTIEGLEKSAQLDNLALDDAVQILIKTVEVAKNEPGHQHR
Ga0209220_11185303	3300027587	Forest Soil	MCLTCGCHLPHENHGKKDYLVIEDLEKSAAIDGYSLDKAIRFLVETVEVAKKEAGRKQK
Ga0209726_100859402	3300027815	Groundwater	MCLTCGCLKPHDEHGNPDYLTIDELEKSAKLDKLSLDEAVSN
Ga0209514_100193833	3300027819	Groundwater	MCLTCGCLKPHENHGKEDYLTIEQFEKSAGLDNLGLDAAVENLKKTVEIAKKEGQHAHR
Ga0209580_100007351	3300027842	Surface Soil	MCLTCGCMLPHDRHGSQDHLIIEDLEKSARVDNMTLDKAVENLLLTIDVAKHEKGHHHR
Ga0209180_100683243	3300027846	Vadose Zone Soil	MCLTCGCLLPHEDHGNPDYLTIEGLEKSARLDNLALDDAVQMLVKTVEVAKNEPDHQHR
Ga0209701_103990351	3300027862	Vadose Zone Soil	MCLTCGCMLPHDAHGNPDYLTIEDLEMSAAADSIGLDEAVRNLVATVEVAKGEPDHEH
Ga0209590_1000002323	3300027882	Vadose Zone Soil	MCLTCGCRLPHESHGKADYLLIEDLEKSAKLDGYTLDEAVRHLIDTVEVAKKEPDHHHN
Ga0299907_102689774	3300030006	Soil	MCLTCGCMLPHENHGNSDYLTIEDLERSAEIDKLDLAAAVENLVKTVDIAKNEAEHEHR
Ga0268386_106178122	3300030619	Soil	MCLTCGCLLPHETHGKTGYLTIEDLETSAEIDGYTLDQALQNLIETVEVRNEEDHQHR
Ga0268386_108207972	3300030619	Soil	KPDYLTIEDLEKSAKVDQLTLDEAINNLVKTVEVAKREGEHEHR
Ga0302046_111332341	3300030620	Soil	MCLTCGCMLPHENHGNSDYLTIEDLERSAEIDKIDLAAAVENLVK
Ga0326597_105259601	3300031965	Soil	MMPHDDHGNPNYLTIEDLEKSAKADDMGLDEAVANLVKTVEVAKQEPEHQHS
Ga0326726_105615672	3300033433	Peat Soil	MCLTCGCMQPHDDHGNPDYLTIEGLERSAGADSMGLDEAVRNLIATVEVAKAEGEHEHR
Ga0326726_122389382	3300033433	Peat Soil	MCLTCGCMLPHDDHGNRDHLTIEDLESSAAADSMGLDEAVRNLVATVEVAKGETDHEHR
Ga0364928_0092363_517_696	3300033813	Sediment	MCLTCGCLLPHENHGKPDYLTIEALEKSAAIDSYDLDTAVKNLIETVAVAKQEAGHQHR
Ga0326723_0105079_164_322	3300034090	Peat Soil	MLPHDDHGNRDHLTIEDLESSAAADSMGLDEAVRNLVATVEVAKGETDHEHR
Ga0326723_0240555_575_733	3300034090	Peat Soil	MQPHDDHGNPDYLTIEGLERSAGADSMGLDEAVRNLIATVEVAKAEGEHEHR
Ga0364940_0129574_2_154	3300034164	Sediment	MCLTCGCLLPHENHGKPDYLTIEALEKSAAIDSYDLDTAVKNLIETVAVAK
Ga0370495_0206334_126_281	3300034257	Untreated Peat Soil	LPHEDHGKTGYLTIEDLERSAGIDGYNLDQAVQNLVETVEVARHEEGHKHQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067244

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences