Metagenome / Metatranscriptome Family F067485

Basic Information
Family ID	F067485
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	52 residues
Representative Sequence	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQ
Number of Associated Samples	116
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	16.67 %
% of genes near scaffold ends (potentially truncated)	93.60 %
% of genes from short scaffolds (< 2000 bps)	85.60 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (58.400 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (23.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.600 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.81% β-sheet: 0.00% Coil/Unstructured: 35.19%
Feature Viewer

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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00364	Biotin_lipoyl	36.80
PF02786	CPSase_L_D2	8.00
PF02785	Biotin_carb_C	4.80
PF13194	DUF4010	1.60
PF08281	Sigma70_r4_2	1.60
PF08240	ADH_N	0.80
PF01977	UbiD	0.80
PF03447	NAD_binding_3	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.80

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.40 %
Unclassified	root	N/A	41.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.40 %
Unclassified	root	N/A	41.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.40 %
Unclassified	root	N/A	41.60 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	58.40 %
Unclassified	root	N/A	41.60 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58.40 %
Unclassified	root	N/A	41.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28.80 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.60 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.20 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.60 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.20 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01AOIFI	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	501	Open in IMG/M
2170459003\|FZN2CUW02I0RM7	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1059701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300003579\|Ga0007429J51699_1029228	Not Available	517	Open in IMG/M
3300004479\|Ga0062595_102412680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300004643\|Ga0062591_101988387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300004643\|Ga0062591_102822193	Not Available	515	Open in IMG/M
3300005169\|Ga0066810_10013158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1265	Open in IMG/M
3300005332\|Ga0066388_104917719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300005332\|Ga0066388_107575093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300005335\|Ga0070666_10855227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300005364\|Ga0070673_100011071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6146	Open in IMG/M
3300005444\|Ga0070694_101790429	Not Available	523	Open in IMG/M
3300005618\|Ga0068864_102105643	Not Available	570	Open in IMG/M
3300005764\|Ga0066903_105787488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	649	Open in IMG/M
3300005844\|Ga0068862_100021874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5347	Open in IMG/M
3300006038\|Ga0075365_10761484	Not Available	684	Open in IMG/M
3300006048\|Ga0075363_100143947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1343	Open in IMG/M
3300006051\|Ga0075364_10243022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1223	Open in IMG/M
3300006853\|Ga0075420_101266896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300006914\|Ga0075436_101489343	Not Available	514	Open in IMG/M
3300009088\|Ga0099830_10107300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2094	Open in IMG/M
3300009094\|Ga0111539_10263285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2007	Open in IMG/M
3300009098\|Ga0105245_10030991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4730	Open in IMG/M
3300009143\|Ga0099792_10165199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1232	Open in IMG/M
3300010303\|Ga0134082_10558478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300010371\|Ga0134125_12533802	Not Available	558	Open in IMG/M
3300010376\|Ga0126381_104449258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300010398\|Ga0126383_11093789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	886	Open in IMG/M
3300010403\|Ga0134123_10354539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1326	Open in IMG/M
3300011119\|Ga0105246_12539557	Not Available	505	Open in IMG/M
3300011332\|Ga0126317_10216778	Not Available	539	Open in IMG/M
3300012204\|Ga0137374_10472663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	980	Open in IMG/M
3300012211\|Ga0137377_10148518	Not Available	2244	Open in IMG/M
3300012212\|Ga0150985_103259187	Not Available	505	Open in IMG/M
3300012212\|Ga0150985_111126012	Not Available	506	Open in IMG/M
3300012362\|Ga0137361_11140464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	701	Open in IMG/M
3300012469\|Ga0150984_100747690	Not Available	526	Open in IMG/M
3300012469\|Ga0150984_103217082	Not Available	526	Open in IMG/M
3300012469\|Ga0150984_108869704	Not Available	722	Open in IMG/M
3300012469\|Ga0150984_114480416	Not Available	539	Open in IMG/M
3300012496\|Ga0157353_1020739	Not Available	631	Open in IMG/M
3300012532\|Ga0137373_10982792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300012908\|Ga0157286_10256931	Not Available	619	Open in IMG/M
3300012984\|Ga0164309_10096018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1859	Open in IMG/M
3300013102\|Ga0157371_11280674	Not Available	567	Open in IMG/M
3300014745\|Ga0157377_10644882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	761	Open in IMG/M
3300015200\|Ga0173480_10067185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1657	Open in IMG/M
3300015201\|Ga0173478_10243211	Not Available	782	Open in IMG/M
3300015372\|Ga0132256_102748797	Not Available	591	Open in IMG/M
3300016270\|Ga0182036_11575607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300016341\|Ga0182035_11514763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300016387\|Ga0182040_10711109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	822	Open in IMG/M
3300016422\|Ga0182039_11244636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	673	Open in IMG/M
3300018027\|Ga0184605_10372945	Not Available	642	Open in IMG/M
3300018051\|Ga0184620_10241456	Not Available	605	Open in IMG/M
3300018066\|Ga0184617_1033173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1236	Open in IMG/M
3300018481\|Ga0190271_12234457	Not Available	653	Open in IMG/M
3300019254\|Ga0184641_1217081	Not Available	519	Open in IMG/M
3300019279\|Ga0184642_1616686	Not Available	670	Open in IMG/M
3300019362\|Ga0173479_10399262	Not Available	663	Open in IMG/M
3300020080\|Ga0206350_11168780	Not Available	508	Open in IMG/M
3300021168\|Ga0210406_10899028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300021560\|Ga0126371_13358541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300022756\|Ga0222622_10879874	Not Available	656	Open in IMG/M
3300025919\|Ga0207657_10201067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1603	Open in IMG/M
3300025926\|Ga0207659_11154276	Not Available	666	Open in IMG/M
3300025972\|Ga0207668_10096250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2187	Open in IMG/M
3300025986\|Ga0207658_11716159	Not Available	573	Open in IMG/M
3300026309\|Ga0209055_1029317	Not Available	2535	Open in IMG/M
3300026514\|Ga0257168_1025790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1238	Open in IMG/M
3300026532\|Ga0209160_1260254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	589	Open in IMG/M
3300026557\|Ga0179587_11032422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	541	Open in IMG/M
3300026557\|Ga0179587_11138094	Not Available	514	Open in IMG/M
3300026855\|Ga0208404_1001047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	901	Open in IMG/M
3300027480\|Ga0208993_1005657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2104	Open in IMG/M
3300028714\|Ga0307309_10092183	Not Available	714	Open in IMG/M
3300028715\|Ga0307313_10048494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1240	Open in IMG/M
3300028719\|Ga0307301_10275484	Not Available	551	Open in IMG/M
3300028744\|Ga0307318_10220180	Not Available	658	Open in IMG/M
3300028787\|Ga0307323_10071640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1232	Open in IMG/M
3300028791\|Ga0307290_10324553	Not Available	563	Open in IMG/M
3300028824\|Ga0307310_10712679	Not Available	515	Open in IMG/M
3300028828\|Ga0307312_10029236	Not Available	3200	Open in IMG/M
3300028875\|Ga0307289_10394132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300028878\|Ga0307278_10161478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1002	Open in IMG/M
3300028881\|Ga0307277_10114334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1153	Open in IMG/M
3300030829\|Ga0308203_1096143	Not Available	503	Open in IMG/M
3300030830\|Ga0308205_1062870	Not Available	513	Open in IMG/M
3300031058\|Ga0308189_10373167	Not Available	581	Open in IMG/M
3300031058\|Ga0308189_10532432	Not Available	510	Open in IMG/M
3300031091\|Ga0308201_10345420	Not Available	544	Open in IMG/M
3300031184\|Ga0307499_10195742	Not Available	619	Open in IMG/M
3300031199\|Ga0307495_10024179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1057	Open in IMG/M
3300031543\|Ga0318516_10330899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	879	Open in IMG/M
3300031544\|Ga0318534_10633245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300031546\|Ga0318538_10018410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3066	Open in IMG/M
3300031547\|Ga0310887_10931859	Not Available	551	Open in IMG/M
3300031562\|Ga0310886_10137030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1272	Open in IMG/M
3300031640\|Ga0318555_10246301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	965	Open in IMG/M
3300031679\|Ga0318561_10784374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300031747\|Ga0318502_10148357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1336	Open in IMG/M
3300031763\|Ga0318537_10173297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	803	Open in IMG/M
3300031769\|Ga0318526_10135307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	998	Open in IMG/M
3300031769\|Ga0318526_10153938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	935	Open in IMG/M
3300031777\|Ga0318543_10321347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	692	Open in IMG/M
3300031780\|Ga0318508_1003712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3038	Open in IMG/M
3300031796\|Ga0318576_10503957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300031832\|Ga0318499_10272391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300031833\|Ga0310917_10003965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7500	Open in IMG/M
3300031910\|Ga0306923_11379175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	743	Open in IMG/M
3300031942\|Ga0310916_10658704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	887	Open in IMG/M
3300032008\|Ga0318562_10088751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1743	Open in IMG/M
3300032010\|Ga0318569_10482987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577	Open in IMG/M
3300032035\|Ga0310911_10638410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300032064\|Ga0318510_10125112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	998	Open in IMG/M
3300032065\|Ga0318513_10678744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300032066\|Ga0318514_10738348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	523	Open in IMG/M
3300032174\|Ga0307470_10249713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1171	Open in IMG/M
3300032179\|Ga0310889_10411046	Not Available	673	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.20%
Host-Associated	Host-Associated	20.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.80%
Plants	Host-Associated → Plants	20.80%
Aquatic	Environmental → Aquatic	6.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.00%
Freshwater	Environmental → Aquatic → Freshwater	3.20%
Sediment	Environmental → Aquatic → Sediment	3.20%
Roots	Host-Associated → Plants → Roots	2.40%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.60%
Loam	Environmental → Terrestrial → Soil → Loam	4.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.40%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.40%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.40%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.40%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.20%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.40%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.40%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.40%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.60%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.80%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.80%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300003579	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026855	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_3614320	2040502001	Soil	MESLAVFFSARGRLAPRAFATGAAVVYGTAFLSFLLIS
E4A_05481240	2170459003	Grass Soil	MESLALFLLRRGRLAPRAFAAGAAVVYGTAFLSFLLISPPVMLRVGLAPFALVQAIAL
AP72_2010_repI_A001DRAFT_10597012	3300000893	Forest Soil	MQSLALFFSARGRLAPRAFAASAAAVYGTAFLSQLLISAPVMLH
Ga0007429J51699_10292282	3300003579	Avena Fatua Rhizosphere	MESLALFFSDFGRLAPKPFAHAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQ
Ga0062595_1024126801	3300004479	Soil	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQATAMWAWFCLHAKR
Ga0062591_1019883871	3300004643	Soil	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQATAMWAWFCLHA
Ga0062591_1028221932	3300004643	Soil	METLALFFSGFGRLAPKPFARAAVAVYVTAFLSQLLISPSVMLRIGLAAFAVVQAMAMWAWFCLH
Ga0066810_100131583	3300005169	Soil	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQAMAMWAWF
Ga0066388_1049177192	3300005332	Tropical Forest Soil	MQSLALFFSARGRLAPRAFAASAAAVYGTAFLSQLLISAPVMLHAGLAPFALVQAIATWS
Ga0066388_1075750931	3300005332	Tropical Forest Soil	MESLALFFSARGRLAPRAFAAGAAAVYGTAFLSQLLISAPVMLHAGLAPFA
Ga0070666_108552272	3300005335	Switchgrass Rhizosphere	MESLALFFSPFGRLAPKPFGRAAAAVYGLAFLSQLLISPPLMFRIGLAPFALVQAMAIWGWFCVHAK
Ga0070673_1000110711	3300005364	Switchgrass Rhizosphere	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFALV
Ga0070694_1017904292	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MESLALFFSPFGRLAPKPFGRAAAAVYGLAFLSQLLISPPLMFR
Ga0068864_1021056431	3300005618	Switchgrass Rhizosphere	MEPLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVLPRMGLAAFALVQAMAMWAWFCLHAKR
Ga0066903_1057874882	3300005764	Tropical Forest Soil	MEWLALFFSARGRLAPRAFAAGAAAVYGTAFLSQLLISAPVMLHAGLAPFALV
Ga0068862_1000218746	3300005844	Switchgrass Rhizosphere	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQ
Ga0075365_107614842	3300006038	Populus Endosphere	MESLALFFSPFGRLAPKPFGRAAAAVYGLAFLSQLLISPPLMFRIGLAPFALVQGMAIWG
Ga0075363_1001439471	3300006048	Populus Endosphere	MESLALFFSAFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQATA
Ga0075364_102430221	3300006051	Populus Endosphere	MESLGLFFSPFGRLAPKPFGRAAAAVYGLAFLSQLLISPPLMFRIGLAPFALVQAMAI
Ga0075420_1012668962	3300006853	Populus Rhizosphere	MESLALFFSSFGRLAPKRFARAVLAVYGAAFLSQLLISPAVMVRIGLAALVQAMAMWAWFCLHAKRLRDA
Ga0075436_1014893432	3300006914	Populus Rhizosphere	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPAMLRIGLAA
Ga0099830_101073001	3300009088	Vadose Zone Soil	MESLALFFSARGRLAPRAFAAGAAVVYGTAFLSFLLISPPAMLRAGLAPFALVQAIALWCWF
Ga0111539_102632851	3300009094	Populus Rhizosphere	MKSLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAF
Ga0105245_100309916	3300009098	Miscanthus Rhizosphere	MESLALFCSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFA
Ga0099792_101651992	3300009143	Vadose Zone Soil	MESLAVFFSARGRLAPRAFAAGAAVVYGTAFLSFLLISPPVMLRVGLAPFALVQAIALWC
Ga0134082_105584782	3300010303	Grasslands Soil	MESLAVFFSARGRLAPRAFAAGAAVVYGTAFLSFLLISPPVMLRVG
Ga0134125_125338021	3300010371	Terrestrial Soil	MESLGLFFSPFGRLAPKPFGRAAAAVYGLAFLSQLLISPPLMF
Ga0126381_1044492581	3300010376	Tropical Forest Soil	MESLALFFSARGRLAPRAFAAGAAAVYGTAFLSQLLIS
Ga0126383_110937892	3300010398	Tropical Forest Soil	MQSLGLFFSARGRLAPRAFAAGVAAVYGTAFLSQLLISAPVMLHAGLAPFALVQAI
Ga0134123_103545391	3300010403	Terrestrial Soil	MESLALFFSPFGRLAPKPFGRAAAAVYGLAFLSQLLISPPLMFRIGLAPFALVQAMAIW
Ga0105246_125395572	3300011119	Miscanthus Rhizosphere	MESLALFFSGFGRLAPKPFAHAVVAVYVAAFLSQLLISPP
Ga0126317_102167781	3300011332	Soil	MDSLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQAMAMWDWF
Ga0137374_104726632	3300012204	Vadose Zone Soil	MESLALFFSARGRVSPRAFAAAVAAVYGTAFLSQLLISAPVMLHAGLSPFALVQAIAIWAWFCLHA
Ga0137377_101485181	3300012211	Vadose Zone Soil	MESLAVFFSARGRLAPRAFAAGAAVVYGTAFLSFLLIS
Ga0150985_1032591871	3300012212	Avena Fatua Rhizosphere	MDSLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIG
Ga0150985_1111260121	3300012212	Avena Fatua Rhizosphere	MESFSLFFSGFGRLAPKPFARAVVAVYVAAFLSQLL
Ga0137361_111404641	3300012362	Vadose Zone Soil	MESLAVFFSARGRLAPRAFAAGAAVVYGTAFLSFLLISPPVMLRVGLAPFALVQAIALWCWFCLHASR
Ga0150984_1007476902	3300012469	Avena Fatua Rhizosphere	MDSLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQA
Ga0150984_1032170821	3300012469	Avena Fatua Rhizosphere	MESLALFFSGFGRLAPTPFARAVVAVYVAAFLSQLLISPAGMLRIGLAAFALVQAMA
Ga0150984_1088697043	3300012469	Avena Fatua Rhizosphere	MESLALFFSDFGRLAPKPFAHAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQA
Ga0150984_1144804162	3300012469	Avena Fatua Rhizosphere	MKSLVLFFSGFGRLAPKPFARAVVAVYAAAFLSQLLISPAGMLRIGLAAFALVQAMA
Ga0157353_10207391	3300012496	Unplanted Soil	MESLALFFSGFGRLAPKPFARAVVAVYAAAFLSQLLISP
Ga0137373_109827921	3300012532	Vadose Zone Soil	MESLALFFSARGRVSPRAFAAAVAAVYGTAFLSQLLISAPVMLHAGLSPFALVQA
Ga0157286_102569311	3300012908	Soil	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLI
Ga0164309_100960183	3300012984	Soil	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQAMA
Ga0157371_112806741	3300013102	Corn Rhizosphere	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRI
Ga0157377_106448823	3300014745	Miscanthus Rhizosphere	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQL
Ga0173480_100671851	3300015200	Soil	MESLALFFSAFGRLAPKPFARAVVAVYVAAFLSQLLISPP
Ga0173478_102432113	3300015201	Soil	METLALFFSGFGRLAPKPFARAAVAVYVTAFLSQLLISPSVMLRIGLAAFALVQAMAMWAWFC
Ga0132256_1027487972	3300015372	Arabidopsis Rhizosphere	MESLALFFSGFGRLAPKPFARAVVAVYAAAFLSQLLISPPVMLRIGL
Ga0182036_115756072	3300016270	Soil	MESLALFFSARGRLAPRAFAAGAAAVYGTAFLSQLLISA
Ga0182035_115147631	3300016341	Soil	MESLALFFSARGRVAPRAFAAGAAAVYGTAFLSQLLISAPVMLHAGLAPFALV
Ga0182040_107111092	3300016387	Soil	MESLAVFFSARGRLAPRAFAASAAVVYGTAFLSLLLISPPVMLRAGLAPFALVQAI
Ga0182039_112446361	3300016422	Soil	MESLALFFSARGRLAPRAFAAGAAAVYGTAFLSQLLISAPVMLHAGL
Ga0187777_113702472	3300017974	Tropical Peatland	VPALLLSPRGRLAPAPFARGVSAVYLAAFLSQLLAAPPLVARVGLAPFALAQ
Ga0184605_103729451	3300018027	Groundwater Sediment	MESLALYFSLFGRLAPKTFARAVVAVYVTAFVSQLLISPVVMLRL
Ga0184620_102414561	3300018051	Groundwater Sediment	MESLALFFSGLGRLAPKPFARAVVAVYVAAFLSQLLI
Ga0184617_10331733	3300018066	Groundwater Sediment	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQAMAMWV
Ga0190271_122344571	3300018481	Soil	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISP
Ga0184641_12170811	3300019254	Groundwater Sediment	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLGIGLAAFALVQA
Ga0184642_16166861	3300019279	Groundwater Sediment	MESLALYFSLFGRLAPKTFARAVVAVYVTAFLTQLLIAPAVMLRLGLAPFALVQATA
Ga0173479_103992621	3300019362	Soil	MESLALFFSGFGRLAPKPFAHAVVAVYVAAFLSQLLISPPV
Ga0206350_111687802	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	METLALFFSGFGRLAPKPFAHAVVAVYVAAFLSQLLISPPVMLRIGLAAFA
Ga0210406_108990282	3300021168	Soil	MESLALFFSARGHLAPRAFAAGAAVVYGTALLSFLLISPPVMLRVGLAPFALV
Ga0126371_133585411	3300021560	Tropical Forest Soil	MESLAVFFSARGRLAPRAFAASAAVVYGAALLSLLLISPPVMLRAGLAPFALVQAIAIWCWFCLHAKR
Ga0222622_108798741	3300022756	Groundwater Sediment	MESLALYFSLFGRLAPKTFARAVVAVYVTAFLSQLLISPAVMLRLGLAPFALVQATA
Ga0207657_102010673	3300025919	Corn Rhizosphere	MESLALFFSGFGRLAPKPFAHAVVAVYVAAFLSQLLISPPVMLRIGLAA
Ga0207659_111542762	3300025926	Miscanthus Rhizosphere	MESLALFFSGFGRLAPKPFAHAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQAMAMWAWF
Ga0207668_100962501	3300025972	Switchgrass Rhizosphere	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPV
Ga0207658_117161592	3300025986	Switchgrass Rhizosphere	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLA
Ga0209055_10293173	3300026309	Soil	MESLAVFFSARGRLAPRAFAAGAAVVYGTAFLSFLLISPPVMLRVGLAPFALAQAIALWCWFC
Ga0257168_10257902	3300026514	Soil	MESLALFFSARGRLAPRAFAAGAAVVYGTAFLSFLLISPPAMLRAGLAPFALVQAIALWCWFCLHAK
Ga0209160_12602542	3300026532	Soil	MESLAVFFSARGRLAPRAFAAGAAVVYGTAFLSFLLISPPVMLRVGLAPFALAQPIALWCWFCLH
Ga0179587_110324222	3300026557	Vadose Zone Soil	MESLALFFSARGRLAPRAFAAGAAVVYGTAFLSFLLISPPAMLRAGLAPFALVQA
Ga0179587_111380942	3300026557	Vadose Zone Soil	MESLALYFSLFGRLAPKTFARAVVAVYVTAFLSQLLISPAVML
Ga0208404_10010471	3300026855	Soil	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPAMLRIGLAAFALIQAMAMWAWFCLHAK
Ga0208993_10056574	3300027480	Forest Soil	MESLAFFFSAFGRLGPRAFARAAVVVYGTAFLSQLLISPPVVL
Ga0209656_101118513	3300027812	Bog Forest Soil	VLALLLSPRGCLAPQPFARGVIAVYLAAFLSQLLAAPPVIAHAGLAPFALAQALVTWCWLSL
Ga0307309_100921831	3300028714	Soil	MESLALFFSGFGRLAPTPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQALAMWAWFC
Ga0307313_100484943	3300028715	Soil	MESLALYFSLFGRLAPKTFARAVVAVYVTAFVSQLLISPVVMLRLGLAPFAL
Ga0307301_102754841	3300028719	Soil	MESLALFFSGLGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLDI
Ga0307318_102201801	3300028744	Soil	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQA
Ga0307323_100716401	3300028787	Soil	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLGIGL
Ga0307290_103245532	3300028791	Soil	MESLALYFSFFGRLAPKTFARAVVAVYVTAFLSQLLISPAVMLRLGLAPFALVQATAMWAWF
Ga0307310_107126791	3300028824	Soil	MESLALYFSLFGRLAPKTFARAVVAVYVTAFLSQLLISPAVMLRLGLA
Ga0307312_100292364	3300028828	Soil	MESLALYFSPFGRLAPKTFARAVVAVYVAAFLSQLLISPAVMLRLGLAPFALVQATAMWAWFCLHAK
Ga0307289_103941322	3300028875	Soil	MESLALYFSLFGRLAPKTFARAVVAVYVTAFLTQLLIAPAVMLRLGLAPFALVQATAMWAWFCLHAKRRRRGALRPMC
Ga0307278_101614782	3300028878	Soil	MESLALYFSLFGRLAPKTFARAVVAVYVTAFLSQLS
Ga0307277_101143343	3300028881	Soil	MESLALYFSLFGRLAPKTFARAVVAVYATAFVSQLLISPVVMLRLGLAPFALV
Ga0308203_10961432	3300030829	Soil	MEPLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLIAPPVLPRMGLAAFALVQAMAMW
Ga0308205_10628702	3300030830	Soil	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLGIGLAAFALVQ
Ga0308189_103731672	3300031058	Soil	MESLALFFSGLGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLDIGLAAFALVQATAMWAWF
Ga0308189_105324321	3300031058	Soil	MESLALYFSLFGRLAPKTFARAVVAVYVTAFVSQLLISPVVMLRLGLAPFALVQ
Ga0308201_103454202	3300031091	Soil	MESLALYFSFFGRLAPKTFARAVVAVYVTAFLSQLLISPAVMLRLGLAPFALVQATAMWAWFCLHA
Ga0307499_101957422	3300031184	Soil	MESLALFFSGLGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLDIGLAAFALVQATAMWAWFC
Ga0307495_100241793	3300031199	Soil	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQAVAMWA
Ga0318516_103308992	3300031543	Soil	MESLAVFFSARGRLAPRAFAAGAAVVYGTALLSALLISPPVLLRAGLAPF
Ga0318534_106332452	3300031544	Soil	MESLAVFFSARGRLAPRAFATGAAGVYGTAFLSFLLISPPVMLRAG
Ga0318538_100184101	3300031546	Soil	MESLALFFSARGRVAPRAFAAAVVAVYGAAFLSQLLISAPVMLHAGLVPFALVQAIATWSWFC
Ga0310887_109318592	3300031547	Soil	MESLALFFSGFGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLRIGLAAF
Ga0310886_101370301	3300031562	Soil	MESLALFFSGLGRLAPKPFARAVVAVYVAAFLSQLLISPPVMLDIG
Ga0318555_102463012	3300031640	Soil	MESLAVFFSARGRLAPRAFAAGAAVVYATAFLSPLLISPPVMLRAGLVPFALVQAIAIWCWFCLHAKRL
Ga0318561_107843741	3300031679	Soil	VLALFLSARGHLAPELFARAVVAVYLAGLLSQLLASAPVMARAGLAPFVLAQAF
Ga0318501_100204441	3300031736	Soil	VPALLFSPRGRLAPAPFARAVSAVYLAAFLSQLLAAPPVVARAGLAPFALVQALA
Ga0318502_101483571	3300031747	Soil	MESLALFFSARGRLAPRAFAAGAAAVYGTAFLSQLLISAPVMLHAGLAPFALMQA
Ga0318537_101732972	3300031763	Soil	MESLAVFFSARGRLAPRAFAASAAVVYGTAFLSLLLISPPVMLRAGLAPFALVQAIAM
Ga0318526_101353071	3300031769	Soil	MESLAVFFSARGRLAPRAFAAGAAVVYATAFLSPLLISPPVMLRAGLVPFA
Ga0318526_101539382	3300031769	Soil	MESLALFFSARGRLAPRAFAAGAAAVYGTAFLSQL
Ga0318543_103213471	3300031777	Soil	VLALFLSARGHLAPELFARAVVAVYLAGLLSQLLASAPVMARAGLAPF
Ga0318508_10037121	3300031780	Soil	MESLALFFSARGRVAPRAFAAAVVAVYGAAFLSQLLISAPV
Ga0318576_105039572	3300031796	Soil	MESLALFFSARGRVAPRAFAAAVVAVYGAAFLSQLLISAPVMLHAGLVPFALVQAIATWSWFCLHAKRL
Ga0318499_102723911	3300031832	Soil	VPALLFSPRGRLAPAPFARAVSAVYLAAFLSQLLAAPPVVARAGLAPFALVQALAVWC
Ga0310917_100039651	3300031833	Soil	VPALLFSPRGRLAPAPFARAVSAVYLAAFLSQLLA
Ga0306923_113791751	3300031910	Soil	METLALFFSARGRVAPRAFAAAVVAVYGAAFLSQLL
Ga0306921_123355231	3300031912	Soil	VHALLFSPRGRLAPRPFARAVSAVYLAAFLSQLLAAPLMVVRAGLA
Ga0310912_102424901	3300031941	Soil	VPALLFSPRGRLAPAPFARAVSAVYLAAFLSQLLAAPPVVARAGLAPFA
Ga0310916_106587041	3300031942	Soil	MESLALFFSARGRLAPRAFAAGAAAVYGTAFLSQLLISAPVMLHAGLAPFALVQ
Ga0318562_100887511	3300032008	Soil	MESLAVFFSARGRLAPRAFAAGAAVVYATAFLSPLLISPPVMLRAGLVPFALVQ
Ga0318569_104829871	3300032010	Soil	MESLAVFFSARGRLAPRAFAAGAAVVYGTAFLSALLISPP
Ga0310911_106384102	3300032035	Soil	MESLALFFSAGGRLAPRAFATGVAVVYGTAFLSFLFILPPVMLRVGLAPFALVQAIALWCWF
Ga0318510_101251121	3300032064	Soil	MESLAVFFSARGRLAPRAFAAGAAVVYGTALLSALLISPPVLLRAGLAPFALVQAIAIWCWL
Ga0318513_106787442	3300032065	Soil	VLALFLSARGHLAPELFARAVVAVYLAGLLSQLLASAPVMA
Ga0318514_107383482	3300032066	Soil	MESLALFFSARGRVAPRAFAAAVVAVYGAAFLSQLLISAPVML
Ga0307470_102497132	3300032174	Hardwood Forest Soil	MESLALLFSARGRLAPRAFAAGAAVVYGTALLSFLLI
Ga0310889_104110462	3300032179	Soil	MESLALFFSGFGRLAPKPFAHAVVAVYVAAFLSQLLISPPVMLRIGLAAFALVQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067485

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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