Metagenome / Metatranscriptome Family F067509

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067509
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	71 residues
Representative Sequence	MSEVQTVGGESGGDYVHFLRAGSSVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSVLQ
Number of Associated Samples	100
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.49 %
% of genes near scaffold ends (potentially truncated)	26.40 %
% of genes from short scaffolds (< 2000 bps)	87.20 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.400 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.400 % of family members)
Environment Ontology (ENVO)	Unclassified (21.600 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.800 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.08% β-sheet: 18.18% Coil/Unstructured: 73.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF01569	PAP2	8.00
PF13185	GAF_2	3.20
PF01590	GAF	3.20
PF12728	HTH_17	2.40
PF00590	TP_methylase	0.80
PF02683	DsbD	0.80
PF04227	Indigoidine_A	0.80
PF00072	Response_reg	0.80
PF05545	FixQ	0.80
PF07295	DUF1451	0.80
PF01794	Ferric_reduct	0.80
PF09334	tRNA-synt_1g	0.80
PF04977	DivIC	0.80
PF02887	PK_C	0.80
PF08335	GlnD_UR_UTase	0.80
PF03009	GDPD	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG2919	Cell division protein FtsB	Cell cycle control, cell division, chromosome partitioning [D]	0.80
COG4736	Cbb3-type cytochrome oxidase, subunit 3	Energy production and conversion [C]	0.80
COG4839	Cell division protein FtsL	Cell cycle control, cell division, chromosome partitioning [D]	0.80
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.80
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.80
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.80
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.80
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.80
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.80
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.80
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.80
COG2313	Pseudouridine-5'-phosphate glycosidase (pseudoU degradation)	Nucleotide transport and metabolism [F]	0.80
COG2844	UTP:GlnB (protein PII) uridylyltransferase	Signal transduction mechanisms [T]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.40 %
Unclassified	root	N/A	1.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.40 %
Unclassified	root	N/A	1.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.40 %
Unclassified	root	N/A	1.60 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	64.80 %
Unclassified	root	N/A	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	64.80 %
Unclassified	root	N/A	1.60 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	49.60 %
Unclassified	root	N/A	1.60 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	48.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
Unclassified	root	N/A	1.60 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	48.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
Unclassified	root	N/A	1.60 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	48.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
Unclassified	root	N/A	1.60 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	48.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
Unclassified	root	N/A	1.60 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	48.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
Unclassified	root	N/A	1.60 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0609726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300000956\|JGI10216J12902_102877713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
3300000956\|JGI10216J12902_119929045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300002568\|C688J35102_120218887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	933	Open in IMG/M
3300002568\|C688J35102_120358772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1012	Open in IMG/M
3300004114\|Ga0062593_101884781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300004114\|Ga0062593_102515709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300004156\|Ga0062589_101883755	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300004479\|Ga0062595_100227750	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300004479\|Ga0062595_100266671	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300005093\|Ga0062594_100934036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300005184\|Ga0066671_10020465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2916	Open in IMG/M
3300005294\|Ga0065705_11050735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300005332\|Ga0066388_100011995	All Organisms → cellular organisms → Bacteria	6892	Open in IMG/M
3300005332\|Ga0066388_101447147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1197	Open in IMG/M
3300005347\|Ga0070668_100843630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	816	Open in IMG/M
3300005435\|Ga0070714_100672151	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300005435\|Ga0070714_101930793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300005454\|Ga0066687_10589727	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300005457\|Ga0070662_100859534	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005468\|Ga0070707_100579913	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300005471\|Ga0070698_101628363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300005526\|Ga0073909_10048867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1527	Open in IMG/M
3300005534\|Ga0070735_10008875	All Organisms → cellular organisms → Bacteria	7862	Open in IMG/M
3300005535\|Ga0070684_100333734	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300005587\|Ga0066654_10147157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1193	Open in IMG/M
3300005713\|Ga0066905_101905773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300005713\|Ga0066905_102098048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300005764\|Ga0066903_100145272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3388	Open in IMG/M
3300005764\|Ga0066903_100586790	All Organisms → cellular organisms → Bacteria	1926	Open in IMG/M
3300005764\|Ga0066903_101503260	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300005764\|Ga0066903_107839276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300005985\|Ga0081539_10006715	All Organisms → cellular organisms → Bacteria	10842	Open in IMG/M
3300006034\|Ga0066656_10529535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300006046\|Ga0066652_100735173	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300006806\|Ga0079220_11205633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300006844\|Ga0075428_100503943	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300006847\|Ga0075431_100671849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1015	Open in IMG/M
3300006880\|Ga0075429_100446910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1133	Open in IMG/M
3300009098\|Ga0105245_11367093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300009098\|Ga0105245_12035320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300009148\|Ga0105243_12648520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300009148\|Ga0105243_12998126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300009176\|Ga0105242_10485467	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300009545\|Ga0105237_12123385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300009553\|Ga0105249_12349929	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300009840\|Ga0126313_11106465	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300010040\|Ga0126308_10004198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6587	Open in IMG/M
3300010043\|Ga0126380_10893227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	737	Open in IMG/M
3300010044\|Ga0126310_10401995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	976	Open in IMG/M
3300010147\|Ga0126319_1625758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300010322\|Ga0134084_10270731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300010329\|Ga0134111_10199315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300010333\|Ga0134080_10382128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300010366\|Ga0126379_11715889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300010375\|Ga0105239_11961498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	679	Open in IMG/M
3300010375\|Ga0105239_13216327	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300010376\|Ga0126381_103447519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300011003\|Ga0138514_100000748	All Organisms → cellular organisms → Bacteria	3719	Open in IMG/M
3300011992\|Ga0120146_1064163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300012204\|Ga0137374_10000079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75303	Open in IMG/M
3300012204\|Ga0137374_10000967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31813	Open in IMG/M
3300012204\|Ga0137374_10273251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1402	Open in IMG/M
3300012212\|Ga0150985_103446147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300012212\|Ga0150985_106800142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300012212\|Ga0150985_115502623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300012355\|Ga0137369_10000238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	44414	Open in IMG/M
3300012360\|Ga0137375_10182308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2010	Open in IMG/M
3300012360\|Ga0137375_10599589	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300012469\|Ga0150984_114288969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300012469\|Ga0150984_117623161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300012948\|Ga0126375_10330009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1073	Open in IMG/M
3300012955\|Ga0164298_10700123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300012957\|Ga0164303_10631574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300012961\|Ga0164302_11293432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300012972\|Ga0134077_10409879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300013306\|Ga0163162_10500931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1345	Open in IMG/M
3300013772\|Ga0120158_10001349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31114	Open in IMG/M
3300014150\|Ga0134081_10163752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300014325\|Ga0163163_11675436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300014969\|Ga0157376_12845775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300015356\|Ga0134073_10086650	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300015371\|Ga0132258_10759768	All Organisms → cellular organisms → Bacteria	2442	Open in IMG/M
3300015372\|Ga0132256_101233370	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300015372\|Ga0132256_101398353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	811	Open in IMG/M
3300017966\|Ga0187776_10453242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	869	Open in IMG/M
3300018027\|Ga0184605_10390055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300018056\|Ga0184623_10131528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1157	Open in IMG/M
3300018061\|Ga0184619_10086199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1399	Open in IMG/M
3300018064\|Ga0187773_10166608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1149	Open in IMG/M
3300018071\|Ga0184618_10224317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300018071\|Ga0184618_10408503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300018076\|Ga0184609_10091716	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300018482\|Ga0066669_10984092	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	760	Open in IMG/M
3300019279\|Ga0184642_1131624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300021560\|Ga0126371_10699020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1162	Open in IMG/M
3300025922\|Ga0207646_10277569	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300025922\|Ga0207646_10312686	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300025926\|Ga0207659_11899696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300025928\|Ga0207700_10677111	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300025937\|Ga0207669_10363162	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300026308\|Ga0209265_1159934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300027821\|Ga0209811_10036253	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300027821\|Ga0209811_10079206	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300027882\|Ga0209590_10041995	All Organisms → cellular organisms → Bacteria	2497	Open in IMG/M
3300027909\|Ga0209382_10347585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1662	Open in IMG/M
3300028719\|Ga0307301_10165088	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300028721\|Ga0307315_10037875	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300028722\|Ga0307319_10111926	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300028754\|Ga0307297_10157687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	777	Open in IMG/M
3300028811\|Ga0307292_10177572	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300028814\|Ga0307302_10317520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300028878\|Ga0307278_10226765	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300030336\|Ga0247826_10304462	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300030336\|Ga0247826_11556357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300030511\|Ga0268241_10126458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300030902\|Ga0308202_1163597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300031092\|Ga0308204_10246441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300031170\|Ga0307498_10197651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300031544\|Ga0318534_10269106	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300031938\|Ga0308175_102578984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300031939\|Ga0308174_10298135	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300031996\|Ga0308176_10461534	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.00%
Host-Associated	Host-Associated	24.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.60%
Plants	Host-Associated → Plants	24.00%
Aquatic	Environmental → Aquatic	6.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.40%
Sediment	Environmental → Aquatic → Sediment	4.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.80%
Freshwater	Environmental → Aquatic → Freshwater	1.60%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.80%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.80%
Loam	Environmental → Terrestrial → Soil → Loam	14.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.80%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.20%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.60%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.80%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.20%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.40%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.40%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.60%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.80%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.80%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.80%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_06097262	3300000033	Soil	MPERRPAGGEPXGDYVRFVRAGAPVKGEFHCAECGYGVTVYRALPVCPMCGGGEWEQSAWSPLSRARALH*
JGI10216J12902_1028777132	3300000956	Soil	VLEVDQLADEASADFVQFVAAGQQAKGEFHCAECGYGVTVCRELPICPMCGNDSWEQSAWSPFARARVLQ*
JGI10216J12902_1199290452	3300000956	Soil	MPEQRLAGGEPAGDYVRFVRAGAPVKGEFHCAECGYGVTVYRTLPICPMCGGGEWEQSDWSPLSRARALH*
C688J35102_1202188872	3300002568	Soil	MSELQTVGGEPGGDYVRFLPAGASVKGEFHCSECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLTRARSVVQ*
C688J35102_1203587723	3300002568	Soil	MSELQTVGGEPGGDYVHFHPAGASVKGEFHCSECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSVASRA*
Ga0062593_1018847813	3300004114	Soil	VAGREPAGDFVDFLTAGAHVKGEFHCAECGYGVTVYRALPVCPMCGGVQWEQSAWSPLTRARILQ*
Ga0062593_1025157092	3300004114	Soil	MPERRPAGGEPAGDYVRFVRAGAPVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSDWSPLSRARALH*
Ga0062589_1018837551	3300004156	Soil	MRDIGVAGREPVGDFVDFLTAGAHVKGEFHCAECGYGVTVYRALPVCPMCGGVQWEQSAWSPLTRARIL
Ga0062595_1002277503	3300004479	Soil	MQLLEVHETADETSVDFVQFLAAGQQAKGEYHCAECGYGVTVCRTLPRCPMCGNGAWEQSAWSPFARARKVLQ*
Ga0062595_1002666712	3300004479	Soil	MRDIGVAGREPVGDFVDFLTAGAHVKGEFHCAECGYGVTVYRALPVCPMCGGVQWEQSAWSPLTRARILQ*
Ga0062594_1009340363	3300005093	Soil	MPERRPAGGEPAGDYVRFVRAGAPVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSDWSPLSRARALR*
Ga0066671_100204651	3300005184	Soil	MSEPQTVGGESSGDYVHFLPTGASVKGEFHCAECGYGVTVYRTLPVCPMCGGDEWEQSAWSPLTRARSVLQ*
Ga0065705_110507351	3300005294	Switchgrass Rhizosphere	MPERRAVGGEPAGDYVRFVRAGVPVKGEFHCAECGYGVTVYRELPVCPMCGGGEWEQSAWSPLSRARALH*
Ga0066388_1000119955	3300005332	Tropical Forest Soil	MSELQAAERESAGDYVHFVRAGAHVKGEFHCAECGYGVTVYRALPVCPMCGGIEWEQSAWSPLSRARGVLH*
Ga0066388_1014471473	3300005332	Tropical Forest Soil	MSELQAAERESAGDYVHFVRAGAHVKGEFHCAECGYGVTVYRTLPICPMCGGNQWEQSAWSPLSRARSVLR*
Ga0070668_1008436301	3300005347	Switchgrass Rhizosphere	GVAGREPVGDFVDFLTAGVHVKGEFHCAECGYGVTVYRALPVCPMCGGVQWEQSAWSPLTRARILQ*
Ga0070714_1006721512	3300005435	Agricultural Soil	MSELHPTGGDSAADYVNFVSSGSNVKGEFHCAECGYGVTVYRALPVCPMCGGTEWEQSAWSPLSRARSVLH*
Ga0070714_1019307932	3300005435	Agricultural Soil	NVEGVDLLDIEPSAASGDVSGDYVAFASTGEPAKGEYHCAECGYGVTVYRELPRCPMCGGESWEQSTWSPFARARSILQ*
Ga0066687_105897272	3300005454	Soil	METGSVEGVDLVDVEPPESPAVSGDDYVSFAQTGEHVKGEYHCAECGYGVTVYRELPRCPMCGGESWEQSAWSPFGRARSILQ*
Ga0066687_106715271	3300005454	Soil	GYVRFVLTGEHVKGEFHCAECGYGVTIFRELPRCPMCGGESWEQTAWSPFGRGRNVLQ*
Ga0070662_1008595342	3300005457	Corn Rhizosphere	MRDVEAAAREPAGDFVDFLVAGARVKGEFHCSECGYGVTVFRALPVCPMCGGNEWEQSAWSPLTRARILQ*
Ga0070707_1005799131	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDAKPTGARESADDYVHFVRMGEHVKGEFHCAECGYGVTIYRELPRCPMCGGESWEQSDWSPFVRA
Ga0070698_1016283631	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRDVGVAGREPGGDFVDFLSAGARVKGEFHCAECGYGVTVYRALPVCPMCGGADWEQSTWSPLTRARGIVR*
Ga0073909_100488673	3300005526	Surface Soil	MSEVVHPAGIDSSDDFVDFVASGARVKGEFHCSECGYGVTVYRTLPVCPMCGGEQWEQTAWSPLSRARGVPQ*
Ga0070735_100088759	3300005534	Surface Soil	MNVEPAAGAREAPEDYVQFVPAGEHVKGEYRCAECGYGVTVYRELPRCPMCGNETWEQSAWSPFGLARNVLQ*
Ga0070684_1003337344	3300005535	Corn Rhizosphere	MSELQTVGGETGGDFVHFLPAGSSVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSV
Ga0066654_101471571	3300005587	Soil	AMSEPQTVGGESSGDYVHFLPTGASVKGEFHCAECGYGVTVYRTLPVCPMCGGDEWEQSAWSPLTRARSVVQ*
Ga0066905_1019057731	3300005713	Tropical Forest Soil	MSELHPAEVESSGDYVTFAAAGSHVKGEFHCADCGYGVTVYRTLPACPMCGGEQWEQSAWSPLSRARSVLH*
Ga0066905_1020980482	3300005713	Tropical Forest Soil	MPNLETTRREPVSDFVGFFSTGMQVKGEFHCAECGYGVTVCRELPTCPMCGGEQWEQTAWSPFERARSILQ*
Ga0066903_1001452722	3300005764	Tropical Forest Soil	MSELQSVATEPSGDYVDFVRAGASVKGEFHCAECGYGVTVYRTLPVCPMCGGLQWEQSAWSPLSRARGVLR*
Ga0066903_1005867901	3300005764	Tropical Forest Soil	TSVEKGVRMSELHPAGGEPSADYVQFLSSGSRVKGEFHCSECGYGVTVYRVLPVCPMCGGTEWEQSAWSPLSRARNVVH*
Ga0066903_1015032603	3300005764	Tropical Forest Soil	MPHLGSVRRTSVGDHIELVAAGDRAKGEFHCSECGYGVTVYKVLPVCPMCGSEEWAKSDWSPLGRARSILQ*
Ga0066903_1078392762	3300005764	Tropical Forest Soil	MPQLGSVRRTSVGDHVELVAAGVRAKGEFHCSECGYGVTVYKVLPVCPMCGSEEWEKSDWSPLARARSILQ*
Ga0081539_100067155	3300005985	Tabebuia Heterophylla Rhizosphere	VLDVHETTDDASGDFVQFHAAGQQAKGEFHCAECGYGVTVWRTLPRCPMCGNESWEQSAWSPFARARNVLQ*
Ga0066656_105295353	3300006034	Soil	QTVGGESSGDYVHFLPTGASVKGEFHCAECGYGVTVYRTLPVCPMCGGDEWEQSAWSPLTRARSVVQ*
Ga0066652_1007351732	3300006046	Soil	MSELQTAGGESSGDYVNFLPAGASVKGEFHCAECGYGVTVYRTLPVCPMCAGEEWEQSAWSPLTRARSVRQ*
Ga0079220_112056331	3300006806	Agricultural Soil	GDYVHFLPAGSSVKGEFHCAECGYGVTVYRSLPVCPMCGGGQWEQSAWSPLSRARRVLQ*
Ga0075428_1005039433	3300006844	Populus Rhizosphere	MQLLEVHETADETSVDFVQFLAAGQQAKGEYHCAECGYGVTVCRTLPRCPMCGNGAWEQSAWSPFARARKVL
Ga0075431_1006718493	3300006847	Populus Rhizosphere	MQLLEVHETADETSVDFVQFLAAGQHAKGEYHCAECGYGVTVCRTLPRCPMCGNGAWEQSAWSPFARARKVLQ*
Ga0075434_1010022181	3300006871	Populus Rhizosphere	ETADETSVDFVQFLAAGQQAKGEYHCAECGYGVTVCRTLPRCPMCGNGAWEQSAWSPFARARKVLQ*
Ga0075429_1004469103	3300006880	Populus Rhizosphere	MQLLEVHETADETSVDFVQFLAAGQQAKGEYHCAECGYGVTVCRTLPRCPMCGNGAWEQSAWSPFARARKVL*
Ga0105245_113670932	3300009098	Miscanthus Rhizosphere	MSEVQTVGGESGGDYVHFLRAGSSVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSVLQ*
Ga0105245_120353202	3300009098	Miscanthus Rhizosphere	MELLEVEETADETSVDFVQFLAAGQQAKGEYHCAECGYGVTVCRTLPRCPMCGNGAWEQSAWSPFARARKVLQ*
Ga0105243_126485202	3300009148	Miscanthus Rhizosphere	GDYVHFLRAGSSVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSVLQ*
Ga0105243_129981262	3300009148	Miscanthus Rhizosphere	MSELQTVGGEHGGDYVHFLPAGSSVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSVPQ*
Ga0105242_104854672	3300009176	Miscanthus Rhizosphere	MSEVQTVGGESGGDYVHFLRAGSSVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSVVQ*
Ga0105237_121233852	3300009545	Corn Rhizosphere	MSEVQTVGGETGGDYVHFLRAGSSVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSVLQ*
Ga0105249_123499291	3300009553	Switchgrass Rhizosphere	MPERRSAGGEPAGDYVRFVRAGAPVKGEFHCAERGYGVTVYRTLPVCPMCGGGEWEQSDWSPLSRARALR*
Ga0126313_111064652	3300009840	Serpentine Soil	MSEVQSVRGEPGGDYVHFLPAGTSVKGEFHCSECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSIVQ*
Ga0126308_100041985	3300010040	Serpentine Soil	MSEVQPVRGEPGGDYVHFLPAGTSVKGEFHCSECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSIVQ*
Ga0126380_108932272	3300010043	Tropical Forest Soil	MSELHPADDASSDGYVHFFSSGSRVKGEFHCAECGYGVTVYRALPVCPMCGGTQWEQSAWSPLSRARNVVH*
Ga0126310_104019953	3300010044	Serpentine Soil	MSELQTVGGEPGGDYVHFLPAGTSVKGEFHCSECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSVVR*
Ga0126319_16257581	3300010147	Soil	GMRDVKAAAREPAGDFVDFLVAGARVKGEFHCSECGYGVTVFRALPVCPMCGGNEWEHSAWSPLTRARTLQ*
Ga0134084_102707312	3300010322	Grasslands Soil	MSEVHTAGAELSGDYVHFLPAGASVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSVLQ*
Ga0134111_101993151	3300010329	Grasslands Soil	RESTDDFVDFHAAGARVKGEFHCAECGYGVTVYRTLPVCPMCGGAQWEQSAWSPLSRARTRN*
Ga0134080_103821281	3300010333	Grasslands Soil	TVGGESSGDYVHFLPTGASVKGEFHCAECGYGVTVYRTLPVCPMCGGDEWEQSAWSPLTRARSVVQ*
Ga0126379_117158892	3300010366	Tropical Forest Soil	MSELHPAGGEPSADYVQFLSSGSRVKGEFHCSECGYGVTVYRVLPVCPMCGGTEWEQSAWSPLSRARNVVH*
Ga0105239_119614982	3300010375	Corn Rhizosphere	MELLEVEETADETSVDFVQFLAAGQHAKGEYHCAECGYGVTVCRTLPRCPMCGNGAWEQSAWSPFARARKVLQ*
Ga0105239_132163272	3300010375	Corn Rhizosphere	MPERRPAGGEPAGDYVRFVRAGAPVKGEFHCAECGYGVTVYRSLPVCPMCGGVEWEQSAWSPLS
Ga0126381_1034475192	3300010376	Tropical Forest Soil	MSELHPADDASSDGYVHFFSSGSRVKGEFHCAECGYGVTVYRVLPVCPMCGGTQWEQSAWSPLSRARNVVH*
Ga0138514_1000007482	3300011003	Soil	MRDVEAVGREPTGDFVDFLSTGEHVKGEFHCSGCGYGVTVYRALPVCPMCGGNEWEQSAWSPLTRARSTIQ*
Ga0120146_10641631	3300011992	Permafrost	MRDVGAAGRESGGDFVDFLAAGVQVKGEFHCAQCGYGVTVYRALPVCPMCSGTAWEQVPWSPLTRALELPTVEIAPIAP*
Ga0137374_1000007943	3300012204	Vadose Zone Soil	MLDVEPAGTREASGDYVVFALTGEQVKGEYHCAECGYGVTVYRLLPRCPMCGNETWEQSAWSPFARARSILQ*
Ga0137374_1000096727	3300012204	Vadose Zone Soil	VKGGIAVLEVNESADDESADFVQFVAAGQQVKGEFHCADCGYGVTVYRELPVCPMCGNDSWEQSAWSPFARARVLQ*
Ga0137374_102732512	3300012204	Vadose Zone Soil	MRDVEAVGRESVGDFVDFLSAGAHVKGEFHCAECGYGVTVYRALPICPMCGGAQWEQSAWSPLTRARSVIQ*
Ga0150985_1034461472	3300012212	Avena Fatua Rhizosphere	MSELQTIGGEPGGDYIHFLPAGTSVKGEFHCSECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSVVQ*
Ga0150985_1068001421	3300012212	Avena Fatua Rhizosphere	LREGVTMSELQAVGGERGGDYVHFLPAGASVKGEFHCSECGYGVTVYRTLPVCPMCGGEEWEQSAWSPLSRARSVVQ*
Ga0150985_1155026231	3300012212	Avena Fatua Rhizosphere	MSELQTVGGEPGGDYVHFHPAGASVKGEFHCSACGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSLLQ*
Ga0137369_1000023833	3300012355	Vadose Zone Soil	MGTVEAGSQGSVREGVEMLDVEPAGTREASGDYVVFALTGEQVKGEYHCAECGYGVTVYRLLPRCPMCGNETWEQSAWSPFARARSILQ*
Ga0137375_101823082	3300012360	Vadose Zone Soil	MRDVEAVGRESVGDFVDFLSAGAHVKGEFHCAECGYGVTVYRALPICPMCGGAQWEQSAWSPLTRARSVRQ*
Ga0137375_105995892	3300012360	Vadose Zone Soil	VLDVNETADEESVDFVRFLAAGQQAKGEYHCAECGYGVTVCRTLPRCPMCGNGAWEQSTWSPFARA
Ga0150984_1142889692	3300012469	Avena Fatua Rhizosphere	AMSELQTVGGEPGGDYVHFHPAGASVKGEFHCSECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSVASRA*
Ga0150984_1176231612	3300012469	Avena Fatua Rhizosphere	GVTMSELQTVGGEPGGDYVRFLPAGATVKGEFHCSECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLTRARSVVQ*
Ga0126375_103300093	3300012948	Tropical Forest Soil	MSEGHPAGLDSSDDFVDFVASGARVKGDFHCAECGYGVTVYKALPVCPMCGSEEWEKSDWSPLARARSILQ*
Ga0164298_107001231	3300012955	Soil	MRDIEAAGREPAGDFVDFLAAGARVKGEYHCSECGYGVTVFRALPVCPMCGGDEWEQSAWSPLTRARILQ*
Ga0164303_106315743	3300012957	Soil	MSELQTVGGETGGDYVHFLPAGSSVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARNVTQ*
Ga0164302_112934322	3300012961	Soil	MSELRTVGGEAGGDYVHFLPAGSSVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARNVTQ*
Ga0134077_104098791	3300012972	Grasslands Soil	MSDPQTVGGESSGDYVHFLPTGASVKGEFHCAECGYGVTVYRTLPVCPMCGGDEWEQSAWSPLTRARSVVQ*
Ga0163162_105009312	3300013306	Switchgrass Rhizosphere	MSELQTVGGEHGGDYVHFLPAGSSVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSVLQ*
Ga0120158_1000134934	3300013772	Permafrost	MRDDGAAGRESGGDFVDFLAAGVHVKGEFHCAECGYGVTVYRALPVCPMCGGGEWEQSAWSPLTRARSIVQ*
Ga0134081_101637522	3300014150	Grasslands Soil	MSEPQTVGGESSGDYVHFLPTGASVKGEFHCAECGYGVTVYRTLPVCPMCGGDEWEQSAWSPLTCARSVVQ*
Ga0163163_116754362	3300014325	Switchgrass Rhizosphere	MSELQTVGGETGGDFVHFLPAGSSVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSVVQ*
Ga0157376_128457752	3300014969	Miscanthus Rhizosphere	MSELQTVGGETGGDFVHFLPAGSSVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSAWSPLSRARSVVQ
Ga0134073_100866501	3300015356	Grasslands Soil	MSEPQTVGGESSGDYVHFLPTGASVKGEFHCAECGYGVTVYRTLPVCPMCGGDEWEQSAWSPLTRARSVRQ*
Ga0132258_107597682	3300015371	Arabidopsis Rhizosphere	MSNVESAGRESVSGYVDFVSTGMHVKGEFHCAECGYGVTVCRELPTCPMCGGEEWEQTAWSPFERARSVLQ*
Ga0132256_1012333702	3300015372	Arabidopsis Rhizosphere	MSELHPAGEEHAGDFVDFVRAGAHAKGEFHCAECGYGVTVYRTLPVCPMCGGAEWEQSAWSPLSRARSVLH*
Ga0132256_1013983532	3300015372	Arabidopsis Rhizosphere	MSERRTVGGEAGGDYVHFLPAGSSVKGEFHCAECGYGVTVYRTLPVCPMCGGVEWEQSAWSPLSRARNVRQ*
Ga0187776_104532423	3300017966	Tropical Peatland	VAGGREGAADYVHFALTGDAVKGEYHCAECGYGVTVHRVLPRCPMCGNESWELSAWSPFARARSVLL
Ga0184605_103900552	3300018027	Groundwater Sediment	MRDVEAAGREPTGDFVDFLSTGEHVKGEFHCSACGYGVTVYRALPVCPMCGGNEWEQSAWSPLTRARSIIQ
Ga0184623_101315283	3300018056	Groundwater Sediment	MRETRVSEPPTDDFVAFWPTGKAVKGEFHCSECGYGVTIVRALPVCPMCGGRSWEESAWSPFTRSRSNALL
Ga0184619_100861992	3300018061	Groundwater Sediment	MPDAESAGREPTGDFVVFLSTGANVKGEFHCSGCGYGVTVYRALPVCPMCGGNEWEQSAWSPLTRARSIIQ
Ga0187773_101666082	3300018064	Tropical Peatland	MNVEPVAGGREGAADYVHFALTGDAVKGEYHCAECGYGVTVHRVLPRCPMCGNESWELSAWSPFARARSVLL
Ga0184618_102243172	3300018071	Groundwater Sediment	MRDVEAAGREPTGDFVDFLSTGEHVKGEFHCSGCGYGVTVYRALPVCPMCGGNEWEQSAWSPLTRARSIVQ
Ga0184618_104085032	3300018071	Groundwater Sediment	MRDVDTAGRESVDDFVDFLAAGARVKGEFHCAECGYGVTVYRALPVCPMCGGNSWEQTAWSPFARADGSIPH
Ga0184609_100917161	3300018076	Groundwater Sediment	MRDVDAAGRESGGDFVDFLAAGARVKGEYHCAECGYGVTVYRALPVCPMCGGAQWEQSAWSPLTRARSI
Ga0066669_109840921	3300018482	Grasslands Soil	MRDVEAAERELAGDYVQFSSAGAHVKGEFHCAECGYGVTVYRTLPVCPMCGCSQWEQSAWSPLSRARSVPQ
Ga0184642_11316242	3300019279	Groundwater Sediment	MRDVEAAGREPTGDFVDFLSTGEHVKGEFHCSGCGYGVTVYRALPVCPMCGGNEWEQSAWSPLTRARSIIQ
Ga0126371_106990203	3300021560	Tropical Forest Soil	EKGVRMSELHPADDASSDGYVHFFSSGSRVKGEFHCAECGYGVTVYRVLPVCPMCGGTQWEQSAWSPLSRARNVVH
Ga0207646_102775693	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MDAKPTGARESADDYVHFVRMGEHVKGEFHCAECGYGVTIYRELPRCPMCGGESWEQSDWSPFARARGVLQ
Ga0207646_103126862	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSDVDAAGREPGGDFVDFLSAGARVKGEFHCAECGYGVTVYRALPVCPMCGGADWEQSTWSPLTRARGILR
Ga0207659_118996961	3300025926	Miscanthus Rhizosphere	MSELQTVGGETGGDFVHFLPAGSSVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSAW
Ga0207700_106771112	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSELHPTGGDSAADYVNFVSSGSNVKGEFHCAECGYGVTVYRALPVCPMCGGTEWEQSAWSPLSRARSVLH
Ga0207669_103631622	3300025937	Miscanthus Rhizosphere	MRDVEAAAREPAGDFVDFLVAGARVKGEFHCSECGYGVTVFRALPVCPMCGGDEWEQSAWSPLTRARILQ
Ga0209265_11599341	3300026308	Soil	AMSEPQTVGGESSGDYVHFLPTGASVKGEFHCAECGYGVTVYRTLPVCPMCGGDEWEQSAWSPLTRARSVVQ
Ga0209811_100362533	3300027821	Surface Soil	MSEVVHPAGIDSSDDFVDFVASGARVKGEFHCSECGYGVTVYRTLPVCPMCGGEQWEQTAWSPLSRARGVPQ
Ga0209811_100792062	3300027821	Surface Soil	MRDVDAAGRESAGDFVDFHAAGARVKGEFHCSECGYGVTVFRALPVCPMCGGDEWEQSAWSPLTRARILQ
Ga0209590_100419952	3300027882	Vadose Zone Soil	MRDVEAAGREPTGDFVDFLSTGANVKGEFHCSGCGYGVTVYRALPVCPMCGGNEWEQSSWSPLTRARSITQ
Ga0209382_103475853	3300027909	Populus Rhizosphere	MQLLEVHETADETSVDFVQFLAAGQQAKGEYHCAECGYGVTVCRTLPRCPMCGNGAWEQSAWSPFARARKVLQ
Ga0307301_101650882	3300028719	Soil	MRDVVAAGREPGGDFVDFLAAGTHAKGEFHCAGCGYGVTVYRALPVCPMCGGAEWEQSAWSPLTRARSL
Ga0307315_100378753	3300028721	Soil	MSELQAVGGERGGDYVHFLPAGASVKGEFHCSECGYGVTVYRTLPVCPMCGGEEWEQSAWSPLSRARSVVQ
Ga0307319_101119263	3300028722	Soil	MPERRPAGGEPAGDYVRFVRAGAPVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSDWSPLSRARALH
Ga0307297_101576871	3300028754	Soil	GERGGDYVHFLPAGASVKGEFHCSECGYGVTVYRTLPVCPMCGGEEWEQSAWSPLSRARSVVQ
Ga0307292_101775722	3300028811	Soil	VLEVNEKADETSVDFVPFVAAGQQAKGEFHCAECGYGVTVCRTLPRCPMCGSGSWEQSAWSPFARARSIPQ
Ga0307302_103175201	3300028814	Soil	MRDVDAAGRESGGDFVDFLAAGARVKGEYHCAECGYGVTVYRALPVCPMCGGAQWEQSAWSPLTRARSITS
Ga0307278_102267653	3300028878	Soil	MRDVEAAGREPTGDFVDFLSTGEHVKGEFHCSGCGYGVTVYRALPVCPMCGGNEWEQSAW
Ga0247826_103044622	3300030336	Soil	MSNVESARGSVSGYVDFVSTGMHVKGEFHCAECGYGVTVCRELPTCPMCGGEEWEQTAWSPFERARSILQ
Ga0247826_115563571	3300030336	Soil	MDAELDSIRGSAQSEFVEFRAAGESVKGEFHCCECGYGVAVCRELPTCPMCGGTAWEQTAWS
Ga0268241_101264581	3300030511	Soil	VIETSHGPDVASGDYVEFVAAGQQVKGEYHCADCGYGVIVFKELPRCPMCGNDTWEQSAWSPFARARNVLQ
Ga0308202_11635972	3300030902	Soil	GILLREGVTMSELQAVGGERGGDYVHFLPAGASVKGEFHCSECGYGVTVYRTLPVCPMCGGEEWEQSAWSPLSRARSVVQ
Ga0308204_102464412	3300031092	Soil	MPEQRFAGGEPAGDYVRFVRAGAPVKGEFHCAECGYGVTVYRTLPVCPMCGGGEWEQSDWSPLSRARALH
Ga0307498_101976512	3300031170	Soil	TMRDVEAAGREPAGDFVDFLAAGARVKGEFHCSECGYGVTVFRALPVCPMCGGNEWEQSAWSPLTRARSIVQ
Ga0318534_102691062	3300031544	Soil	MSELHSVAAESPGDYVHFFSTGASVKGEYHCAECGYGVTVYRALPVCPMCGGTEWEQSAWSPLSRARKVLR
Ga0308175_1025789842	3300031938	Soil	MSELHPAGLEAGGDFVAFVEAGARVKGEFHCADCGYGVTVYRTLPTCPMCGCEHWEQSAWSPLTRARSVLQ
Ga0308174_102981352	3300031939	Soil	VLEFNGATDESSADVVEFLAAGQHVKGEFHCAECGYGVTVYRELPRCPMCGNDSWEQSAWTPFSRARSILQ
Ga0308176_104615343	3300031996	Soil	VLEVNHPTDETSGDVVEFLAAGQQVKGEFHCVDCGYGVTVHKELPRCPMCGNDAWEQSAWTPFARARSVLQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067509

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences