Metagenome / Metatranscriptome Family F067540

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067540
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	80 residues
Representative Sequence	MNNITQYLAEIKAELQELYEDLDHELRNTDNQDLIDDSYRNVTSKLETALSEMEALIGDIDSGIYDDNIHGYEDDGMLEDEE
Number of Associated Samples	89
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.80 %
% of genes near scaffold ends (potentially truncated)	14.40 %
% of genes from short scaffolds (< 2000 bps)	79.20 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.600 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater (18.400 % of family members)
Environment Ontology (ENVO)	Unclassified (50.400 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (55.200 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.55% β-sheet: 0.00% Coil/Unstructured: 45.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF10544	T5orf172	1.60
PF04965	GPW_gp25	0.80
PF07603	DUF1566	0.80
PF00154	RecA	0.80
PF13203	DUF2201_N	0.80
PF01370	Epimerase	0.80
PF00303	Thymidylat_synt	0.80
PF13578	Methyltransf_24	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0207	Thymidylate synthase	Nucleotide transport and metabolism [F]	0.80
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
All Organisms	root	All Organisms	30.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
Viruses	superkingdom	All Organisms → Viruses	26.40 %
cellular organisms	root	All Organisms → cellular organisms	4.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.20 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	11.20 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.40 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.20 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	11.20 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	2.40 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.20 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	11.20 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.40 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.20 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	11.20 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.40 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.20 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	10.40 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.40 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.20 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10.40 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.40 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001282\|B570J14230_10061961	Not Available	1206	Open in IMG/M
3300001968\|GOS2236_1082282	Not Available	1492	Open in IMG/M
3300002356\|B570J29598_101560	Not Available	1097	Open in IMG/M
3300002384\|B570J29636_1002131	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1484	Open in IMG/M
3300002408\|B570J29032_109674115	Not Available	1033	Open in IMG/M
3300002835\|B570J40625_100001094	Not Available	48954	Open in IMG/M
3300002835\|B570J40625_100012322	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	15328	Open in IMG/M
3300003860\|Ga0031658_1010102	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1605	Open in IMG/M
3300004481\|Ga0069718_15425126	Not Available	1181	Open in IMG/M
3300005662\|Ga0078894_10353463	All Organisms → Viruses → Predicted Viral	1331	Open in IMG/M
3300006802\|Ga0070749_10057296	All Organisms → Viruses → Predicted Viral	2358	Open in IMG/M
3300006802\|Ga0070749_10758780	Not Available	516	Open in IMG/M
3300007214\|Ga0103959_1172691	Not Available	2040	Open in IMG/M
3300007216\|Ga0103961_1230910	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2621	Open in IMG/M
3300007541\|Ga0099848_1268202	Not Available	593	Open in IMG/M
3300007541\|Ga0099848_1282364	Not Available	573	Open in IMG/M
3300007559\|Ga0102828_1057971	Not Available	908	Open in IMG/M
3300007639\|Ga0102865_1217273	Not Available	570	Open in IMG/M
3300007960\|Ga0099850_1068420	Not Available	1492	Open in IMG/M
3300007973\|Ga0105746_1099605	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	953	Open in IMG/M
3300007974\|Ga0105747_1015003	All Organisms → Viruses → Predicted Viral	2063	Open in IMG/M
3300007992\|Ga0105748_10437363	Not Available	567	Open in IMG/M
3300007992\|Ga0105748_10552142	Not Available	506	Open in IMG/M
3300008113\|Ga0114346_1096102	All Organisms → Viruses → Predicted Viral	1367	Open in IMG/M
3300008113\|Ga0114346_1129200	Not Available	1966	Open in IMG/M
3300008116\|Ga0114350_1069996	All Organisms → Viruses → Predicted Viral	1200	Open in IMG/M
3300008266\|Ga0114363_1057702	Not Available	1521	Open in IMG/M
3300008267\|Ga0114364_1042639	All Organisms → Viruses → Predicted Viral	1681	Open in IMG/M
3300008448\|Ga0114876_1046719	Not Available	1985	Open in IMG/M
3300008448\|Ga0114876_1072472	Not Available	1459	Open in IMG/M
3300008448\|Ga0114876_1102009	All Organisms → Viruses → Predicted Viral	1141	Open in IMG/M
3300008448\|Ga0114876_1178207	Not Available	743	Open in IMG/M
3300008450\|Ga0114880_1046603	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1852	Open in IMG/M
3300008450\|Ga0114880_1142066	Not Available	875	Open in IMG/M
3300008953\|Ga0104241_1001892	All Organisms → Viruses → Predicted Viral	1603	Open in IMG/M
3300008962\|Ga0104242_1002496	All Organisms → Viruses → Predicted Viral	3591	Open in IMG/M
3300009151\|Ga0114962_10075495	All Organisms → Viruses → Predicted Viral	2149	Open in IMG/M
3300009158\|Ga0114977_10256578	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1008	Open in IMG/M
3300009159\|Ga0114978_10115510	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1757	Open in IMG/M
3300009159\|Ga0114978_10298036	Not Available	988	Open in IMG/M
3300009164\|Ga0114975_10079287	All Organisms → Viruses → Predicted Viral	1911	Open in IMG/M
3300009169\|Ga0105097_10127141	Not Available	1398	Open in IMG/M
3300009183\|Ga0114974_10202711	All Organisms → Viruses → Predicted Viral	1210	Open in IMG/M
3300010157\|Ga0114964_10098738	All Organisms → Viruses → Predicted Viral	1451	Open in IMG/M
3300010354\|Ga0129333_10487067	All Organisms → Viruses → Predicted Viral	1082	Open in IMG/M
3300010885\|Ga0133913_11057431	Not Available	2094	Open in IMG/M
3300010885\|Ga0133913_12610036	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1226	Open in IMG/M
3300011995\|Ga0153800_1000712	Not Available	3000	Open in IMG/M
3300013004\|Ga0164293_10273905	Not Available	1181	Open in IMG/M
3300013005\|Ga0164292_10853548	Not Available	573	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10065730	Not Available	2747	Open in IMG/M
(restricted) 3300013129\|Ga0172364_10128695	Not Available	1743	Open in IMG/M
3300013372\|Ga0177922_10748594	Not Available	512	Open in IMG/M
3300017716\|Ga0181350_1000367	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13318	Open in IMG/M
3300017766\|Ga0181343_1039817	Not Available	1402	Open in IMG/M
3300017766\|Ga0181343_1042190	All Organisms → Viruses → Predicted Viral	1358	Open in IMG/M
3300017788\|Ga0169931_10482588	Not Available	881	Open in IMG/M
3300019784\|Ga0181359_1015645	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2808	Open in IMG/M
3300020074\|Ga0194113_10004001	Not Available	19441	Open in IMG/M
3300020159\|Ga0211734_10316499	Not Available	535	Open in IMG/M
3300020179\|Ga0194134_10383127	Not Available	525	Open in IMG/M
3300020183\|Ga0194115_10367396	Not Available	630	Open in IMG/M
3300020183\|Ga0194115_10374427	Not Available	621	Open in IMG/M
3300020193\|Ga0194131_10146979	Not Available	1173	Open in IMG/M
3300020193\|Ga0194131_10271771	Not Available	774	Open in IMG/M
3300020204\|Ga0194116_10456081	Not Available	614	Open in IMG/M
3300020498\|Ga0208050_1004356	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1769	Open in IMG/M
3300020499\|Ga0208084_1006263	Not Available	1556	Open in IMG/M
3300020501\|Ga0208590_1027927	Not Available	624	Open in IMG/M
3300020506\|Ga0208091_1038917	Not Available	519	Open in IMG/M
3300020518\|Ga0208721_1004861	Not Available	1985	Open in IMG/M
3300020519\|Ga0208223_1029865	Not Available	699	Open in IMG/M
3300020547\|Ga0208361_1030283	Not Available	731	Open in IMG/M
3300021091\|Ga0194133_10075668	Not Available	2709	Open in IMG/M
3300021093\|Ga0194123_10515967	Not Available	528	Open in IMG/M
3300021376\|Ga0194130_10076935	Not Available	2249	Open in IMG/M
3300021961\|Ga0222714_10088144	All Organisms → Viruses → Predicted Viral	2001	Open in IMG/M
3300021963\|Ga0222712_10467620	Not Available	753	Open in IMG/M
3300021963\|Ga0222712_10759319	Not Available	539	Open in IMG/M
3300022179\|Ga0181353_1026437	All Organisms → Viruses → Predicted Viral	1536	Open in IMG/M
3300022179\|Ga0181353_1044292	Not Available	1174	Open in IMG/M
3300022407\|Ga0181351_1071439	All Organisms → Viruses → Predicted Viral	1404	Open in IMG/M
3300022407\|Ga0181351_1191637	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	693	Open in IMG/M
3300023179\|Ga0214923_10000541	Not Available	56911	Open in IMG/M
(restricted) 3300023208\|Ga0233424_10019679	Not Available	3422	Open in IMG/M
3300024346\|Ga0244775_10703088	Not Available	814	Open in IMG/M
3300025848\|Ga0208005_1077851	Not Available	1032	Open in IMG/M
3300027749\|Ga0209084_1103792	Not Available	1248	Open in IMG/M
3300027759\|Ga0209296_1151830	Not Available	1041	Open in IMG/M
3300027782\|Ga0209500_10131409	Not Available	1200	Open in IMG/M
3300027782\|Ga0209500_10417422	Not Available	536	Open in IMG/M
3300027805\|Ga0209229_10207380	Not Available	877	Open in IMG/M
3300027899\|Ga0209668_10007687	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4947	Open in IMG/M
3300027899\|Ga0209668_10305212	All Organisms → Viruses → Predicted Viral	1023	Open in IMG/M
3300027899\|Ga0209668_10697567	Not Available	681	Open in IMG/M
3300031758\|Ga0315907_10678143	Not Available	787	Open in IMG/M
3300031758\|Ga0315907_10713567	Not Available	761	Open in IMG/M
3300031758\|Ga0315907_10874623	Not Available	662	Open in IMG/M
3300031784\|Ga0315899_10827538	Not Available	844	Open in IMG/M
3300031787\|Ga0315900_10466732	Not Available	970	Open in IMG/M
3300031787\|Ga0315900_10826572	Not Available	634	Open in IMG/M
3300031857\|Ga0315909_10018939	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6986	Open in IMG/M
3300031857\|Ga0315909_10058038	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3536	Open in IMG/M
3300031857\|Ga0315909_10120173	Not Available	2223	Open in IMG/M
3300031857\|Ga0315909_10328761	Not Available	1128	Open in IMG/M
3300031857\|Ga0315909_10345378	Not Available	1090	Open in IMG/M
3300031857\|Ga0315909_10881415	Not Available	555	Open in IMG/M
3300031857\|Ga0315909_10959106	Not Available	521	Open in IMG/M
3300031951\|Ga0315904_10147029	Not Available	2394	Open in IMG/M
3300031951\|Ga0315904_10529832	Not Available	1032	Open in IMG/M
3300031963\|Ga0315901_10428967	Not Available	1051	Open in IMG/M
3300031963\|Ga0315901_10882546	Not Available	638	Open in IMG/M
3300032050\|Ga0315906_10066840	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3675	Open in IMG/M
3300032050\|Ga0315906_11253579	Not Available	533	Open in IMG/M
3300032053\|Ga0315284_10334440	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1894	Open in IMG/M
3300032116\|Ga0315903_10249524	Not Available	1535	Open in IMG/M
3300032116\|Ga0315903_10413198	Not Available	1094	Open in IMG/M
3300032116\|Ga0315903_10935608	Not Available	615	Open in IMG/M
3300032116\|Ga0315903_10945780	Not Available	610	Open in IMG/M
3300033979\|Ga0334978_0013191	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4387	Open in IMG/M
3300033979\|Ga0334978_0437592	Not Available	613	Open in IMG/M
3300034061\|Ga0334987_0469415	Not Available	776	Open in IMG/M
3300034092\|Ga0335010_0449176	Not Available	691	Open in IMG/M
3300034101\|Ga0335027_0549329	Not Available	713	Open in IMG/M
3300034117\|Ga0335033_0154264	Not Available	1275	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	85.60%
Marine	Environmental → Aquatic → Marine	14.40%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	44.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	21.60%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	18.40%
Coastal	Environmental → Aquatic → Marine → Coastal	8.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.20%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.40%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	42.40%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	18.40%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	10.40%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	8.80%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	8.00%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.20%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.60%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.60%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.60%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	18.40%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	14.40%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	10.40%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.60%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	8.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	7.20%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.80%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.00%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.00%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.20%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	3.20%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.40%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.40%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.60%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.80%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.80%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.80%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.80%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300001968	Marine microbial communities from Lake Gatun, Panama - GS020	Environmental	Open in IMG/M
3300002356	Freshwater microbial communities from Lake Mendota, WI - 30AUG2010 deep hole epilimnion	Environmental	Open in IMG/M
3300002384	Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300007214	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface layer) 9 sequencing projects	Environmental	Open in IMG/M
3300007216	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface and Bottom layer) 16 sequencing projects	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300008953	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT4	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011995	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1m	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300013129 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cm	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017788	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020179	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0m	Environmental	Open in IMG/M
3300020183	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surface	Environmental	Open in IMG/M
3300020193	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120m	Environmental	Open in IMG/M
3300020204	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015008 Mahale S9 surface	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020499	Freshwater microbial communities from Lake Mendota, WI - 14SEP2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020501	Freshwater microbial communities from Lake Mendota, WI - 27SEP2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020518	Freshwater microbial communities from Lake Mendota, WI - 17AUG2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020519	Freshwater microbial communities from Lake Mendota, WI - 07OCT2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020547	Freshwater microbial communities from Lake Mendota, WI - 05AUG2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021091	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40m	Environmental	Open in IMG/M
3300021093	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015023 Mahale A surface	Environmental	Open in IMG/M
3300021376	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surface	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300023208 (restricted)	Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MG	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025848	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033979	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J14230_100619611	3300001282	Freshwater	MNNITQYLAEMKAELQELYEDLDHELRQTDNQELIDDSYRGVTSKLESALNEMESLIGDIDSGVYDDNIGFEDDGMLEDEE*
GOS2236_10822822	3300001968	Marine	MNNITQYLSEIKAELQELYEDLDHEIRQTDNQDLIDDSYRTVTSKLETALSEMENLIGDIDSGVYDDNIREYEDDGTLEDNE*
B570J29598_1015601	3300002356	Freshwater	MNNITQYLAEIKAELQELYEDLDSELRNTDNQDLIDDSYRNVTSKLETALSEMEALIGDIDSGVYDDNIRDYEDDGMSEDEG*
B570J29636_10021314	3300002384	Freshwater	MDQLKQQLNEMKAELQELYENLDGELRNTDNQALIDDSYHGVVSKLESALNEMETLIGDIDAGVYERSLDIDE
B570J29032_1096741151	3300002408	Freshwater	MNNLTQYLNEIKTELQELYEDLDHELMNTDNQDLIDDSYHNVTSKLESALAELEMLISDVDSGVYDSDINGFEDDELLEVDE*
B570J40625_10000109474	3300002835	Freshwater	MDQLKQQLNEMKAELQELYENLDGELRNTDNQALIDDSYHGVVSKLESALNEMETLIGDIDAGVYERSLDIDEMLEAEEDF*
B570J40625_10001232217	3300002835	Freshwater	MNNITQYLAEIKAELQELYEDLDSELRNTDNQDLIDDSYRNVTSKLETALSEMEALIGDIDSGVYDDNIRDYEDDGMSEDDN*
Ga0031658_10101024	3300003860	Freshwater Lake Sediment	MDNNFKQSLNELKAELQELYETLDNELRNTDNQDLIDDSYHTVTSKLESALSEFDTLINDIDQGVYQRSLDQDDMLEAEEDF*
Ga0069718_154251263	3300004481	Sediment	MNNLTQYLAEMKAELQELYEDLDHELRNSDSQDLIDDSYHNVTSKLESALTEMEALIGDIDNGVYDVDGMLEDEE*
Ga0078894_103534633	3300005662	Freshwater Lake	MNNITQYLNEIKVELQELYEDLDGELRNTDNQGLIDDSYHNVTSKLESALSELETLIGDIDSGIYDDNITSYEDDELSEDEGF*
Ga0070749_100572967	3300006802	Aqueous	MDRQFAQYLNEMKAELQELYEELDSELRNTENEDLIDESYRNVTSKLESALSDMESLINDVDSGIYDRDTDLDGMLEAED*
Ga0070749_107587802	3300006802	Aqueous	MNNLTQYLNEIKAELQELYEDVDNELRNTDNQALIDDSYHGVTSKLESALSELEILISDIDSGIYDDNIVGYEDDGTSEVDE*
Ga0103959_11726912	3300007214	Freshwater Lake	MNNITQYLSEIKAELQELYEDLDHELRQTDNQELIDDSYRGVTSKLESALNEMENLIGDIDSGVYDDNIGFEDDGMLEDEDY*
Ga0103961_12309104	3300007216	Freshwater Lake	MNQLTQYLNEMKVELQELYEDLDNEIRNTDNQDLIDDSYHNVTSKLESALVELETLIGDLDSGIYDNADWLDIDNDTLEVED*
Ga0099848_12682021	3300007541	Aqueous	MNNITQYLNEIKAELQELYEDLDGELRNTDNQGLIDDSYYNVTSKLESALSELETLIGDIDSGIYDDNITSYEDDEMLEDE*
Ga0099848_12823641	3300007541	Aqueous	MNNITQYQAEIKAELQELYEDLDHELRNTDNQDLIDDSYRNVTSKLETALSEMEALIGDIDSGIYDDNIHGYEDDGMLEDEE*
Ga0102828_10579712	3300007559	Estuarine	MNNLTQYLNEIKAELQELYEDLDAEIKATDNDTLMEDGYYNVTSKLEAALTELDVLIADVDSGIYDKEPYAFEDDELLEDEEDF*
Ga0102865_12172732	3300007639	Estuarine	MNNLTQYLNEIKTELQELYEDLDHELMNSDNQDLIDDSYHNVTSKLESALAELEMLISDVDSGVYDSDINGFEDDET
Ga0099850_10684201	3300007960	Aqueous	MNNITQYLAEIKAELQELYEDLDHELRNTDNQDLIDDSYRNVTSKLETALSEMEALIGDIDSGIYDDNIHGYEDDGMLEDEE*
Ga0105746_10996051	3300007973	Estuary Water	MNNLTQYLNEIKTELQELYEDLDHELINSDNQELIDDSYHNVTSKLESALAELEMLISDVDSGIYDTDINGFEDDESLEVDE*
Ga0105747_10150034	3300007974	Estuary Water	MNNLTQYLNEIKTELQELYEDLDHELMNTDNQDLIDDSYHNVTSKLESALAELEMLISDVDSGIYDTDVNGFEDDELLEVDE*
Ga0105748_104373631	3300007992	Estuary Water	MNNLTQYLTEIKTELQELYEDLDHELINSDNQELIDDSYHNVTSKLESALSELETLINDVDSGIYDSDVNGFEDDESLEVED*
Ga0105748_105521421	3300007992	Estuary Water	MNNLTQYLAEMKSELQELYEDLDHELRNSDSQDLIDDSYHNVTSKLESALTEMEVLIGDIDAGVYDTNINNYDNDGTLEDEDY*
Ga0114346_10961025	3300008113	Freshwater, Plankton	SNLTQYLNEIKTELQELYDNLDYELRNTDNQDLIDDSYHNVTSKLESALSEMETLIHDIDNNVYDDPFGNDGMLEDEE*
Ga0114346_11292005	3300008113	Freshwater, Plankton	MNNLTQYLNEIKAELQELYEDLDAEIKATDNDTLMEDGYYNVTSKLESALTELDVLIADVDSGIYDKEPYAFEDDELLEDEEDF*
Ga0114350_10699963	3300008116	Freshwater, Plankton	MNNLTQYLNEVKAELQELYEDVDNELRITDNQALIDDSYYSVTSKLESALSELELLIGDIDAGVYDNDIADHEDDGALEVDE*
Ga0114363_10577024	3300008266	Freshwater, Plankton	MNNLTQYLNEVKAELQELYEDVDNELRITDNQALIDDSYYSVTSKLESALSELELLIGDIDAGVYDNDIADHEDDGTLEVDE*
Ga0114364_10426395	3300008267	Freshwater, Plankton	MDRQFAQALNEMKAELQELYEALDSELRSTDNQNLIDDSYQGVTSKLESALSEFDTLLIDVDNGLYDDNIFDIDDESLEVEE*
Ga0114876_10467194	3300008448	Freshwater Lake	MNNLTQYLNEIKAELQELYETLDNELRITDNQALIDDSYYSVTSKLESALSELELLIGDIDSGVYDNDIADHEDDGMLEVDE*
Ga0114876_10724725	3300008448	Freshwater Lake	MNNLTQYLNEIKAELQELYEDLDHELRQTDNQELIDDSYRGVTSKLETALNEMESLIGDIDSGVYVDNILDYEDDGMSEVDE*
Ga0114876_11020092	3300008448	Freshwater Lake	MNNLTQYLNEIRSELQELYEDLDNELRITENQTLIDESYTTVVSKLESALSEMDVLINDLDAGIYDNNVDLDTDDEMLEGDEF*
Ga0114876_11782072	3300008448	Freshwater Lake	MNNITQYLNEIKAELQELYENLDNELRNTDNQDLIDDSYHNVTSKLESALSEMETLIHDIDNNVYDDPFGDDGMLEDEE*
Ga0114880_10466033	3300008450	Freshwater Lake	MNQLTQYLNEMKVELQELYEDLDNEIRNTDNQDLIDDSYHNVTSKLESALVELETLIGDLDSGIYDNAGWLDIDNDTLEVED*
Ga0114880_11420662	3300008450	Freshwater Lake	MSNITQHLNELKAELQGLYEDLDYELRNTDNQELIDDSYHNVTSKLESALSELETLIGDIDNGVYNKTFNTYEDDGMSEDEE*
Ga0104241_10018923	3300008953	Freshwater	MNNITQYLNEIKAELQELYEDLDSELRNTDNQDLIDDSYHNVTSKLETALSEMESLIGDIDRGVYDKEPYAFEDDGMLEDEE*
Ga0104242_10024969	3300008962	Freshwater	MNNITQYLNEIKAELQELYEDLDSELRNTDNQDLIDDSYHNVTSKLETALSEMESLIGDIDSGVYDKEPYAFEDDGMLEDEE*
Ga0114962_100754955	3300009151	Freshwater Lake	MDNSLKQYLNEMKAELQELYETLDSELRSTDNQGLIEDSYHGVTSKLESALGDFDLLIADVDNGLYDDNILDIDTDLLEVED*
Ga0114977_102565783	3300009158	Freshwater Lake	MNNLTAYLNEIKTELQELYENLDNELMDTENQALIDDSYSNVTSKLESALIELDLLIADVDGGVYDSDLEGWRDD*
Ga0114978_101155101	3300009159	Freshwater Lake	MDNKFKQSLNELKAELQNLYEDIDGELRNTDNQNLIDDSYRNVVSKLESALNEMETLIGDIDAGTYERSLDQDDMLEAEEDL*
Ga0114978_102980361	3300009159	Freshwater Lake	MNNLTQYLTEIKTELQELYEDLDHELMNSDNQELIDDSYHNVTSKLESALAELETLISDVDSGIYDSDVNGFEDDDLLEVED*
Ga0114975_100792871	3300009164	Freshwater Lake	MNNLTQYLTEIKTELQELYEDLDHELMNSDNQELIDDSYHNVTSKLESALSELETLINDVDSGIYDSDVNGFEDDDLLEVED*
Ga0105097_101271413	3300009169	Freshwater Sediment	MNNLTQYLAEMKSELQELYEDLDHELRNSDRQDLIDDSYRNVTSKLESALTEMEALIGDIDAGTYDTNISDYNDDGTLEDEGY*
Ga0114974_102027112	3300009183	Freshwater Lake	MMNNLTQYLTEIKTELQELYEDLDHELMNSDNQELIDDSYHNVTSKLESALAELETLINDVDSGIYDSDVNGFEDDELLEVED*
Ga0114964_100987384	3300010157	Freshwater Lake	MDNSLKQYLNEMKAELQELYETLDSELRSTDNQGLIEDSYHGVTSKLESALGDFDLLIADVDNGLYDDN
Ga0129333_104870673	3300010354	Freshwater To Marine Saline Gradient	MNNITQYLAEIKAELQELYEDLDSELRNTDNQDLIDDSYRNVTSKLETALSEMEALIGDIDSGIYDDNIHGYEDDGMLEDEE*
Ga0133913_110574318	3300010885	Freshwater Lake	TQYLTEIKTELQELYEDLDHELMNSDNQELIDDSYHNVTSKLESALSELETLINDVDSGIYDSDVNGFEDDDLLEVED*
Ga0133913_126100364	3300010885	Freshwater Lake	MDRQFAQALNEMKAELQELYETLDSELRNTDNQDLIDDSYHGVTSKLESALGEFDTLLADVDNGLYDDNIFDMDTDMLEVEE*
Ga0153800_10007127	3300011995	Freshwater	MNNITQYLAEIKAELQELYEDLDSELRNTDNQDLIDDSYRNVTSKLETALSEMESLIGDIDSGVYDDNIRDYEDDGLLEDEE*
Ga0164293_102739053	3300013004	Freshwater	MNNLTQYLAEMKSELQELYEDLDHELRNSDSQDLIDDSYRNVTSKLESALTEMEALIGDIDAGTYDTNIPDYNDDGTLEDEGY*
Ga0164292_108535482	3300013005	Freshwater	MNNLTQYLAEMKSELQELYEDLDHELRNSDSQDLIDDSYRNVTSKLESALTEMEALIGDIDAGTYDTNITDYNDDGTLEDEGY*
(restricted) Ga0172367_100657304	3300013126	Freshwater	MNNLTQYLAEMKAELQELYDNLDYELRQTDNQDLIDDSYHNVTSKLESALSEMETLIHDIDNNIYDDPFGNDRMLEDDEN*
(restricted) Ga0172364_101286955	3300013129	Sediment	MNNLTQYLAEMKAELQELYEDLDSELRLTDNQNLIDDTYRNVTSKLESALSEMETLIGDIDSGVYDDNITDYNDDGMLEDEE*
Ga0177922_107485941	3300013372	Freshwater	MNNLTQYLNEMKTELQELYEDLDHELRNSDNQTLIEDSYYGVTAKLESALSELDILIADVDGGIYDKNDLLDIDNDLLEAEN*
Ga0181350_100036724	3300017716	Freshwater Lake	MDNSLKQYLNEMKAELQELYETLDSELRSTDNQGLIEDSYHGVTSKLESALGEFDLLIADVDNGLYDDNILDIDTDLLEVED
Ga0181343_10398174	3300017766	Freshwater Lake	MNNLTQYLNEVKAELQELYEDIDNELRITDNQALIDDSYYSVTSKLESALSELELLIGDIDAGVYDNDIADHEDDGTLEVDE
Ga0181343_10421902	3300017766	Freshwater Lake	MNNLTQYLTEIKTELQELYEDLDHELMNSDNQDLIDDSYHNVTSKLESALAELEMLISDVDSGVYDSDINGFEDDELLEVDE
Ga0169931_104825881	3300017788	Freshwater	MNNLTQYLAEMKAELQELYDNLDYELRQTDNQDLIDDSYHNVTSKLESALSEMETLIHDIDNNIYDDPFGNDRMLEDDEN
Ga0181359_10156456	3300019784	Freshwater Lake	MNNLTQYLNEMKTELQELYEDLDHELRNSDNQTLIEDSYYGVTAKLESALSELDILIADVDGGIYDKNDLLDIDNDLLEAEN
Ga0194113_1000400130	3300020074	Freshwater Lake	MNNLTQYLNEMKAELQELYEDLDSELRQTDNQDLVDDSYRNITSKLESALSEMETLIGDIDSGVYDDNINNFDSDGMLEDEE
Ga0211734_103164991	3300020159	Freshwater	MNNLTQYLAEIKAELQELYEDLDNELRSSDNQDLIDDSYHSVTSKLEEVLSEFDVLMHDIDNGIYNDNINNYNVDGMLEDEGY
Ga0194134_103831271	3300020179	Freshwater Lake	MNNLTQYLNEMKAELQELYDNLDYELRQTDNQNLIDDSYHNVTSKLESALSEMETLIHDIDNNVYDDNIPWLDSDGMLEDEE
Ga0194115_103673962	3300020183	Freshwater Lake	MINLTQYLNEMKAELQELYDNLDYELRQTDNQELIDDSYHNVTSKLESALSEMETLIHDIDNNVYDDNIPWLDSDGMLEDEE
Ga0194115_103744272	3300020183	Freshwater Lake	MINLTQYLAEMKAELQELYDNLDYELRQTDNQELIDDSYHNVTSKLESALSEMETLIHDIDNNMYDDPFDNDEMLEDEE
Ga0194131_101469792	3300020193	Freshwater Lake	MNNLTQYLNEIKAELQELYEDLDGELRQTDNQDLVDDSYRNITSKLESALSEMELLIIDLNNGMYDDNINNFDSDGMLEDEE
Ga0194131_102717711	3300020193	Freshwater Lake	MNNLIQYLAEMKVELQELYEDLDNELRQTDNRDLIDDSYRNITSKLESALSEMEILIEDIDNGIYNNDISNFNSDRMLEDEE
Ga0194116_104560812	3300020204	Freshwater Lake	MINLTQYLNEIKAELQELYEDLDNELRQTDNQELIDDSYYNVTSKLESALSEMETLIGDIDSGVYDDNINNFDSDGMLEDDEN
Ga0208050_10043564	3300020498	Freshwater	MNNLTQYLNEIKTELQELYEDLDHELMNTDNQDLIDDSYHNVTSKLESALAELEMLISDVDSGIYDTDVNGFEDDELLEVDE
Ga0208084_10062631	3300020499	Freshwater	MNNITQYLAEIKAELQELYEDLDSELRNTDNQDLIDDSYRNVTSKLETALSEMEALIGDIDSGVYDDNIRDYEDDGMSEDEG
Ga0208590_10279271	3300020501	Freshwater	MNNITQYLAEMKAELQELYEDLDHELRQTDNQELIDDSYRGVTSKLESALNEMESLIGDIDSGVYDDNIGFEDDGMLEDEE
Ga0208091_10389171	3300020506	Freshwater	MDQLKQQLNEMKAELQELYENLDGELRNTDNQALIDDSYHGVVSKLESALNEMETLIGDIDAGVYERSLDIDEMLEAEEDF
Ga0208721_10048612	3300020518	Freshwater	MNNITQYLAEIKAELQELYEDLDSELRNTDNQDLIDDSYRNVTSKLETALSEMESLIGDIDSGVYDDNIRDYEDDGMSEDEG
Ga0208223_10298651	3300020519	Freshwater	MNNITQYLAEIKAELQELYEDLDSELRNTDNQDLIDDSYRNVTSKLETALSEMEALIGDIDSGVYDDNIRDYEDDGMSEDDN
Ga0208361_10302832	3300020547	Freshwater	MNNLTQYLNEIKTELQELYEDLDHELMNTDNQDLIDDSYHNVTSKLESALAELEMLISDVDSGVYDSDINGFEDDELLEVDE
Ga0194133_100756684	3300021091	Freshwater Lake	MTNLTQYLNEMKAELQELYDNLDYELRQTDNQELIDDSYHNVTSKLESALSEMETLIHDIDNNVYDDNIPWLDSDGMLEDEE
Ga0194123_105159671	3300021093	Freshwater Lake	MTNLTQYLNEIKAELQELYDNLDYELRQTDNQELIDDSYHNVTSKLESALSEMETLIHDIDNNMYDDPFDNDEMLEDEE
Ga0194130_100769355	3300021376	Freshwater Lake	MNNLTQYLNEMKAELQELYDNLDYELRQTDNQELIDDSYHNVTSKLESALSEMETLIHDIDNNMYDDPFDNDEMLEDEE
Ga0222714_100881444	3300021961	Estuarine Water	MNGLTQYLNEMKIELQELYDGLDHELRATDNQDLIDDSYFSVTSKLETALSELDTLINDVDNGVYDKPLIGTDDDFDGMSEA
Ga0222712_104676202	3300021963	Estuarine Water	MNNLTQYLNEMKTELQELYEDLDHELRNSDNQTLIEDSYYGVTAKLESALSELDILIADVDGGIYDKNDLLDIDNDLLEVEE
Ga0222712_107593191	3300021963	Estuarine Water	MNGLTQYLAEMKAELQELYEGLDHELRSTGNQDLIDDSYFSVTSKLETTLSELDTLINDVDNGVY
Ga0181353_10264374	3300022179	Freshwater Lake	MNNITQYLNEIKVELQELYEDLDSELRNTDNQGLIDDSYHNVTSKLESALSELETLIGDIDSGIYDDNITSYEDDELSEDEGF
Ga0181353_10442921	3300022179	Freshwater Lake	MNNITQYLAEIKAELQELYEDLDSELRNTDNQDLIDDSYRNVTSKLETALSEMESLIGDIDSGVYDDNIRDYEDDGLLEDEE
Ga0181351_10714394	3300022407	Freshwater Lake	MNNLTQYLNEVKAELQELYETLDNELRITDNQALIDDSYYSVTSKLESALSELELLIGDVDSGVYDNDIVDHEDDGTLEVDE
Ga0181351_11916371	3300022407	Freshwater Lake	MDELTQYLNEVKAELQELYSNLDNELRNTDNQQLIDDSYYNVTSKLENALNELDALIADVDGGVYEESIDLDIDGDGTLEVED
Ga0214923_1000054157	3300023179	Freshwater	MNNLTQYLTEIKTELQELYEDLDHELMNSDNQDLIDDSYHNVTSKLESALSELETLINDVDSGIYDSDINRFEDDESLEVDE
(restricted) Ga0233424_1001967910	3300023208	Freshwater	MDNLTLYLAEIKSELQELYEDLNNELQQTENQALIDDSYNNITSKLETALVEIEILITDINNGIYDNNDMYMLDDE
Ga0244775_107030881	3300024346	Estuarine	MNNLTQYLNEIKAELQELYEDLDAEIKATDNDTLMEDGYYNVTSKLEAALTELDVLIADVDSGIYDKEPYAFEDDELLEDEEDF
Ga0208005_10778512	3300025848	Aqueous	MDRQFAQYLNEMKAELQELYEELDSELRNTENEDLIDESYRNVTSKLESALSDMESLINDVDSGIYDRDTDLDGMLEAED
Ga0209084_11037921	3300027749	Freshwater Lake	MDNSLKQYLNEMKAELQELYETLDSELRSTDNQGLIEDSYHGVTSKLESALGDFDLLIADVDNGLY
Ga0209296_11518303	3300027759	Freshwater Lake	MNNLTQYLTEIKTELQELYEDLDHELMNSDNQELIDDSYHNVTSKLESALAELETLINDVDSGIYDSDVNGFEDDELLEVED
Ga0209500_101314091	3300027782	Freshwater Lake	MDNKFKQSLNELKAELQNLYEDIDGELRNTDNQNLIDDSYRNVVSKLESALNEMETLIGDIDAGTYERSLDQDDMLEAEEDL
Ga0209500_104174221	3300027782	Freshwater Lake	MNNLTQYLTEIKTELQELYEDLDHELMNSDNQELIDDSYHNVTSKLESALAELETLINDVDSGIYDSDVN
Ga0209229_102073802	3300027805	Freshwater And Sediment	MNNITQYLAEMKAELQELYEDLDHELRQTDNQELIDDSYRGVTSKLESALNEMESLIGDIDSGVYDDNIGFEDDGLLEDEE
Ga0209668_1000768713	3300027899	Freshwater Lake Sediment	MDNNFKQSLNELKAELQELYETLDNELRNTDNQDLIDDSYHTVTSKLESALSEFDTLINDIDQGVYQRSLDQDDMLEAEEDF
Ga0209668_103052121	3300027899	Freshwater Lake Sediment	MNNLTQYLTEIKTELQELYEDLDHELMNTDNQELIDDSYHNVTSKLESALAELEMLISDVDGGIYDTDINGFEDDETLEDEE
Ga0209668_106975671	3300027899	Freshwater Lake Sediment	MDNSLKQYLNEMKAELQELYETLDSELRSTDNQGLIEDSYHGVTSKLESALGDFDLLIADVDNGLYDDNILDIDTDLLEVED
Ga0315907_106781432	3300031758	Freshwater	MNNLTQYLNEVKAELQELYEDVDNELRITDNQALIDDSYYSVTSKLESALSELELLIGDIDAGVYDNDIADHEDDGALEVDE
Ga0315907_107135671	3300031758	Freshwater	MNNLTQYLAEMKSELQELYEDLDHELRNSDSQDLIDDSYHNVTSKLESALTEMEALIGDIDAGVYDTN
Ga0315907_108746232	3300031758	Freshwater	MNNLTQYLNEVKAELQELYEDIDNELRITDNQALIDDSYYSVTSKLESALSELELLIGDIDAGVYDNDIAGHEDDGTLEV
Ga0315899_108275382	3300031784	Freshwater	MSNLTQYLNEIKTELQELYDNLDYELRNTDNQDLIDDSYHNVTSKLESALSEMETLIHDIDNNVYDDPF
Ga0315900_104667321	3300031787	Freshwater	MSNLTQYLNEIKTELQELYDNLDYELHNTDNQDLIDDSYHNVTSKLESALSEMETLIHDIDNNVYDDPFGNDGMLEDEE
Ga0315900_108265722	3300031787	Freshwater	MNNLTQYLNEVKAELQELYEDVDNELRITDNQALIDDSYYSVTSKLESALSELELLIGDIDAGVYDNDIAGHEDDGTLEVDE
Ga0315909_1001893914	3300031857	Freshwater	MSNLTQYLNEIKTELQELYDNLDYELRNTDNQDLIDDSYHNVTSKLESALSEMETLIHDIDNNVYDDPFGNDGMLEDEE
Ga0315909_100580388	3300031857	Freshwater	MNQLTQYLNEMKVELQELYEDLDNEIRNTDNQDLIDDSYHNVTSKLESALVELETLIGDLDSGIYDNAGWLDIDNDTLEVED
Ga0315909_101201733	3300031857	Freshwater	MSNITQHLNELKAELQGLYEDLDYELRNTDNQDLIDDSYHNVTSKLESALSELETLIGDIDNGVYNKTFNTYEDDGMLEDEE
Ga0315909_103287613	3300031857	Freshwater	MDRQFAQALNEMKAELQELYEALDSELRSTDNQNLIDDSYQGVTSKLESALSEFDTLLIDVDNGLYDDNIFDIDDESLEVEE
Ga0315909_103453781	3300031857	Freshwater	MNNLTQYLNEMKAELQELYEDLDNELRQTDNQALIDDSYHGVTSKLESALSDIEILISDIDAGVYDDNIMDFEDDGMSEVDD
Ga0315909_108814151	3300031857	Freshwater	MNNLTQYLNEIKAELQELYEDLDAEIKATDNDTLMEDGYYNVTSKLESALTELDVLIADVDSGIYDKEPYAFEDDELLEDEEDF
Ga0315909_109591061	3300031857	Freshwater	MDKLKQYLNEMKAELQELYEDLDGELRNTDNQDLIDDSYRNVVSKLETALDELETLIGDIDAGAYERSIELDGLLEDEEDL
Ga0315904_101470291	3300031951	Freshwater	MNNLTQYLNEVKAELQELYEDIDNELRITDNQALIDDSYYSVTSKLESALSELELLIGDIDAGVYDNDIAGHEDDGTLEVDE
Ga0315904_105298323	3300031951	Freshwater	NNLTQYLNEIKAELQELYEDLDHELRQTDNQELIDDSYRGVTSKLETALSEMESLIGDIDSGVYDDNILDYEDDGMSEVDE
Ga0315901_104289673	3300031963	Freshwater	MNNLTQYLNEIKAELQELYEDLDAEIKATDNDTLMEDGYYNVTSKLESALTELDVLIADVDSGIYDKEPYAFEDDELLEDEEEF
Ga0315901_108825462	3300031963	Freshwater	MSNLTQYLNEIKAELQELYDNLDYELRQTDNQDLIDDSYHNVTSKLESALSEMETLIHDIDNSVYDDPFGDDGMLEDEE
Ga0315906_100668402	3300032050	Freshwater	MNNLTQYLNEVKAELQELYEDVDNELRITDNQALIDDSYYSVTSKLESALSELELLIGDIDAGVYDNDIADHEDDGTLEVDE
Ga0315906_112535791	3300032050	Freshwater	MNNLTQYLAEMKSELQELYEDLDHELRNSDSQDLIDDSYHNVTSKLESALTEMEALIGDIDAGVYDTNINDYDNDGTLEDEDY
Ga0315284_103344401	3300032053	Sediment	MDSKFKQSLNELKAELQNLYEDIDGELRNTDNQNLIDDSYRNVVSKLESALDEMETLIGDIDAGAYERSLDQDDMLEAEEDL
Ga0315903_102495242	3300032116	Freshwater	MSNITQHLNELKAELQGLYEDLDYELRNTDNQELIDDSYHNVTSKLESALSELETLIGDIDNGVYNKTFNTYEDDGMLEDEE
Ga0315903_104131984	3300032116	Freshwater	MNNLTQYLNEVKAELQELYEDIDNELRITDNQALIDDSYYSVTSKLESALSELELLIGDIDAGVYDN
Ga0315903_109356081	3300032116	Freshwater	MNNLTQYLNEIKAELQELYEDLDHELRQTDNQELIDDSYRGVTSKLETALSEMESLIGDIDSGVYDDNILDYEDDGMSEVDE
Ga0315903_109457801	3300032116	Freshwater	ITMSNLTQYLNEIKAELQELYDNLDYELRQTDNQDLIDDSYHNVTSKLESALSEMETLIHDIDNSVYDDPFGDDGMLEDEE
Ga0334978_0013191_3718_3966	3300033979	Freshwater	MNNITQYLAEIKAELQELYEDLDSELRNTDNQDLIDDSYRNVTSKLETALSEMESLIGDIDSGVYDDNIRDYEDDGMSEDDN
Ga0334978_0437592_2_238	3300033979	Freshwater	MNNITQYLAEIKAELQELYEDLDSELRNTDNQDLIDDSYRNVTSKLETALSEMEALIGDIDSGVYDDNIRDYEDDGMSE
Ga0334987_0469415_168_410	3300034061	Freshwater	MNPLANYLNQIKTELQEMYEDIDSELRNTDNEQLIDDSYHSVVSKLEEALNEMDTLINDIDSGIYDANNGLDIDTLEVDE
Ga0335010_0449176_475_690	3300034092	Freshwater	MNNITQYLAEMKAELQELYEDLDHELRQTDNQELIDDSYRGVTSKLESALNEMESLIGDIDSGVYDDNIGFE
Ga0335027_0549329_2_229	3300034101	Freshwater	MNNLTQYLAEMKSELQELYEDLDHELRNSDSQDLIDDSYRNVTSKLESALTEMEALIGDIDAGTYDTNIPDYNDDG
Ga0335033_0154264_943_1191	3300034117	Freshwater	MMDQLKQQLNEMKAELQELYENLDGELRNTDNQALIDDSYHGVVSKLESALNEMETLIGDIDAGVYERSLDIDEMLEAEEDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters