Metagenome / Metatranscriptome Family F067578

Basic Information
Family ID	F067578
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	72 residues
Representative Sequence	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVECATAPPR
Number of Associated Samples	110
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.26 %
% of genes near scaffold ends (potentially truncated)	20.00 %
% of genes from short scaffolds (< 2000 bps)	92.00 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Most Common Taxonomy
Group	Bacteria (50.400 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.600 % of family members)
Environment Ontology (ENVO)	Unclassified (33.600 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (34.400 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.49% β-sheet: 0.00% Coil/Unstructured: 48.51%
Feature Viewer

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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13524	Glyco_trans_1_2	15.20
PF02852	Pyr_redox_dim	8.00
PF07992	Pyr_redox_2	4.80
PF04972	BON	4.80
PF02922	CBM_48	4.00
PF00857	Isochorismatase	3.20
PF11752	DUF3309	1.60
PF07681	DoxX	1.60
PF01988	VIT1	0.80
PF00923	TAL_FSA	0.80
PF00871	Acetate_kinase	0.80
PF01436	NHL	0.80
PF03400	DDE_Tnp_IS1	0.80
PF13592	HTH_33	0.80
PF00211	Guanylate_cyc	0.80
PF07228	SpoIIE	0.80
PF06472	ABC_membrane_2	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	3.20
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.20
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	1.60
COG4270	Uncharacterized membrane protein	Function unknown [S]	1.60
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	0.80
COG0282	Acetate kinase	Energy production and conversion [C]	0.80
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.80
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	0.80
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.80
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.80
COG3426	Butyrate kinase	Energy production and conversion [C]	0.80

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.20 %
Unclassified	root	N/A	48.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.20 %
Unclassified	root	N/A	48.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.40 %
Unclassified	root	N/A	48.80 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	11.20 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.00 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.60 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.80 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	11.20 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4.00 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.60 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.80 %
Theionarchaea	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea	0.80 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.80 %
Candidatus Cloacimonetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Cloacimonetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	10.40 %
Candidatus Fraserbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fraserbacteria	0.80 %
unclassified Theionarchaea	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea → unclassified Theionarchaea	0.80 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.80 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.80 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.80 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.80 %
unclassified Candidatus Cloacimonetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Cloacimonetes → unclassified Candidatus Cloacimonetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	9.60 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.80 %
Theionarchaea archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea → unclassified Theionarchaea → Theionarchaea archaeon	0.80 %
Candidatus Fraserbacteria bacterium RBG_16_55_9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fraserbacteria → Candidatus Fraserbacteria bacterium RBG_16_55_9	0.80 %
Candidatus Cloacimonetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Cloacimonetes → unclassified Candidatus Cloacimonetes → Candidatus Cloacimonetes bacterium	0.80 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.80 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples	0.80 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.80 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.80 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	9.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.80 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.80 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.80 %
Theionarchaea archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea → unclassified Theionarchaea → Theionarchaea archaeon	0.80 %
Candidatus Fraserbacteria bacterium RBG_16_55_9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fraserbacteria → Candidatus Fraserbacteria bacterium RBG_16_55_9	0.80 %
Candidatus Cloacimonetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Cloacimonetes → unclassified Candidatus Cloacimonetes → Candidatus Cloacimonetes bacterium	0.80 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.80 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000787\|JGI11643J11755_11784700	Not Available	643	Open in IMG/M
3300000789\|JGI1027J11758_12808102	Not Available	511	Open in IMG/M
3300004633\|Ga0066395_10373276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	798	Open in IMG/M
3300004798\|Ga0058859_11058441	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005187\|Ga0066675_10291112	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300005289\|Ga0065704_10019883	Not Available	1958	Open in IMG/M
3300005294\|Ga0065705_10054898	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300005295\|Ga0065707_10634159	Not Available	672	Open in IMG/M
3300005332\|Ga0066388_100729249	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300005332\|Ga0066388_101407273	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300005332\|Ga0066388_102256005	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300005332\|Ga0066388_106549957	Not Available	587	Open in IMG/M
3300005445\|Ga0070708_100189930	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300005445\|Ga0070708_100333212	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300005467\|Ga0070706_100200941	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300005468\|Ga0070707_101245698	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300005764\|Ga0066903_100044401	All Organisms → cellular organisms → Bacteria	5304	Open in IMG/M
3300005981\|Ga0081538_10041653	All Organisms → cellular organisms → Bacteria	2910	Open in IMG/M
3300006794\|Ga0066658_10799569	Not Available	531	Open in IMG/M
3300006797\|Ga0066659_10986140	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	704	Open in IMG/M
3300006852\|Ga0075433_10201385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1770	Open in IMG/M
3300006853\|Ga0075420_101467486	Not Available	585	Open in IMG/M
3300006854\|Ga0075425_101958455	Not Available	656	Open in IMG/M
3300006904\|Ga0075424_100315884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1664	Open in IMG/M
3300007258\|Ga0099793_10150664	Not Available	1101	Open in IMG/M
3300009012\|Ga0066710_104163036	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fraserbacteria → Candidatus Fraserbacteria bacterium RBG_16_55_9	541	Open in IMG/M
3300009038\|Ga0099829_10628755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	892	Open in IMG/M
3300009089\|Ga0099828_10481941	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300009090\|Ga0099827_10047589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	3210	Open in IMG/M
3300009100\|Ga0075418_11236286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	809	Open in IMG/M
3300009137\|Ga0066709_102995790	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300009143\|Ga0099792_11278092	Not Available	500	Open in IMG/M
3300009147\|Ga0114129_12376315	Not Available	635	Open in IMG/M
3300009807\|Ga0105061_1074075	Not Available	558	Open in IMG/M
3300009811\|Ga0105084_1104166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	538	Open in IMG/M
3300009816\|Ga0105076_1094741	Not Available	574	Open in IMG/M
3300009822\|Ga0105066_1083428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	694	Open in IMG/M
3300009836\|Ga0105068_1127508	All Organisms → cellular organisms → Archaea → Euryarchaeota → Theionarchaea → unclassified Theionarchaea → Theionarchaea archaeon	513	Open in IMG/M
3300010029\|Ga0105074_1059350	Not Available	684	Open in IMG/M
3300010043\|Ga0126380_10511802	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300010046\|Ga0126384_11216705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	695	Open in IMG/M
3300010046\|Ga0126384_11492317	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300010047\|Ga0126382_11420246	Not Available	634	Open in IMG/M
3300010112\|Ga0127458_1100781	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300010146\|Ga0126320_1391140	Not Available	672	Open in IMG/M
3300010358\|Ga0126370_11975847	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300010359\|Ga0126376_12601380	Not Available	554	Open in IMG/M
3300010362\|Ga0126377_11147397	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300010398\|Ga0126383_10151336	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2165	Open in IMG/M
3300010398\|Ga0126383_13394098	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Cloacimonetes → unclassified Candidatus Cloacimonetes → Candidatus Cloacimonetes bacterium	520	Open in IMG/M
3300010403\|Ga0134123_10664765	Not Available	1013	Open in IMG/M
3300011412\|Ga0137424_1080366	Not Available	649	Open in IMG/M
3300011432\|Ga0137428_1197793	Not Available	596	Open in IMG/M
3300012189\|Ga0137388_10061821	All Organisms → cellular organisms → Bacteria	3084	Open in IMG/M
3300012189\|Ga0137388_10101186	All Organisms → cellular organisms → Bacteria	2476	Open in IMG/M
3300012199\|Ga0137383_10211311	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300012203\|Ga0137399_10796219	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300012211\|Ga0137377_10487279	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300012351\|Ga0137386_10708933	Not Available	723	Open in IMG/M
3300012361\|Ga0137360_11239542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	645	Open in IMG/M
3300012361\|Ga0137360_11905667	Not Available	500	Open in IMG/M
3300012362\|Ga0137361_10168470	Not Available	1969	Open in IMG/M
3300012362\|Ga0137361_10368277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1319	Open in IMG/M
3300012363\|Ga0137390_11177373	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300012406\|Ga0134053_1146169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	558	Open in IMG/M
3300012469\|Ga0150984_103448678	Not Available	508	Open in IMG/M
3300012917\|Ga0137395_10496680	Not Available	878	Open in IMG/M
3300012925\|Ga0137419_11634867	Not Available	548	Open in IMG/M
3300012930\|Ga0137407_10318036	Not Available	1427	Open in IMG/M
3300012948\|Ga0126375_11902422	Not Available	522	Open in IMG/M
3300012961\|Ga0164302_11448022	Not Available	563	Open in IMG/M
3300012971\|Ga0126369_10053013	All Organisms → cellular organisms → Bacteria	3475	Open in IMG/M
3300013306\|Ga0163162_11196188	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300015374\|Ga0132255_100195266	All Organisms → cellular organisms → Bacteria	2858	Open in IMG/M
3300018052\|Ga0184638_1209970	Not Available	683	Open in IMG/M
3300018053\|Ga0184626_10147993	Not Available	998	Open in IMG/M
3300018063\|Ga0184637_10518805	Not Available	689	Open in IMG/M
3300018075\|Ga0184632_10435587	Not Available	545	Open in IMG/M
3300019228\|Ga0180119_1107558	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300019228\|Ga0180119_1343656	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300019229\|Ga0180116_1023749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	721	Open in IMG/M
3300019229\|Ga0180116_1038890	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300019229\|Ga0180116_1188539	Not Available	975	Open in IMG/M
3300019233\|Ga0184645_1255877	Not Available	1531	Open in IMG/M
3300019238\|Ga0180112_1062485	Not Available	898	Open in IMG/M
3300019248\|Ga0180117_1377768	Not Available	780	Open in IMG/M
3300019249\|Ga0184648_1180398	Not Available	670	Open in IMG/M
3300019254\|Ga0184641_1177051	Not Available	753	Open in IMG/M
3300019259\|Ga0184646_1051172	All Organisms → cellular organisms → Bacteria	5698	Open in IMG/M
3300020063\|Ga0180118_1030863	Not Available	712	Open in IMG/M
3300020063\|Ga0180118_1249195	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	895	Open in IMG/M
3300020065\|Ga0180113_1287475	Not Available	791	Open in IMG/M
3300020066\|Ga0180108_1194285	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300020067\|Ga0180109_1247159	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300022563\|Ga0212128_10109343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	1785	Open in IMG/M
3300025910\|Ga0207684_11586659	Not Available	530	Open in IMG/M
3300025936\|Ga0207670_10358894	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300025961\|Ga0207712_10413781	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300027490\|Ga0209899_1058245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	788	Open in IMG/M
3300027561\|Ga0209887_1038136	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300027577\|Ga0209874_1139317	Not Available	553	Open in IMG/M
3300027846\|Ga0209180_10487209	Not Available	692	Open in IMG/M
3300027874\|Ga0209465_10184224	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1041	Open in IMG/M
3300027882\|Ga0209590_10152692	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300027954\|Ga0209859_1069878	Not Available	559	Open in IMG/M
3300028536\|Ga0137415_10186453	All Organisms → cellular organisms → Bacteria	1898	Open in IMG/M
3300030574\|Ga0247648_1045948	Not Available	815	Open in IMG/M
3300030574\|Ga0247648_1121734	Not Available	610	Open in IMG/M
3300030604\|Ga0247637_1077972	Not Available	689	Open in IMG/M
3300030829\|Ga0308203_1071388	Not Available	558	Open in IMG/M
3300030904\|Ga0308198_1011325	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1080	Open in IMG/M
3300030904\|Ga0308198_1074824	Not Available	561	Open in IMG/M
3300030990\|Ga0308178_1034743	Not Available	879	Open in IMG/M
3300031092\|Ga0308204_10179811	Not Available	647	Open in IMG/M
3300031094\|Ga0308199_1023718	Not Available	1055	Open in IMG/M
3300031114\|Ga0308187_10086472	Not Available	946	Open in IMG/M
3300031421\|Ga0308194_10169099	Not Available	687	Open in IMG/M
3300032075\|Ga0310890_10411464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1007	Open in IMG/M
3300032205\|Ga0307472_101140396	Not Available	741	Open in IMG/M
3300032770\|Ga0335085_12381956	Not Available	528	Open in IMG/M
3300033551\|Ga0247830_10656842	Not Available	832	Open in IMG/M
3300034643\|Ga0370545_140994	Not Available	551	Open in IMG/M
3300034644\|Ga0370548_076423	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	642	Open in IMG/M
3300034681\|Ga0370546_031049	Not Available	759	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.60%
Host-Associated	Host-Associated	10.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.40%
Aquatic	Environmental → Aquatic	19.20%
Plants	Host-Associated → Plants	9.60%
Human	Host-Associated → Human	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.40%
Freshwater	Environmental → Aquatic → Freshwater	13.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.40%
Sediment	Environmental → Aquatic → Sediment	4.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.40%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.80%
Digestive System	Host-Associated → Human → Digestive System	0.80%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.40%
Sediment	Environmental → Aquatic → Freshwater → Sediment	12.80%
Loam	Environmental → Terrestrial → Soil → Loam	10.40%
Sand	Environmental → Terrestrial → Soil → Sand	8.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.60%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.80%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.80%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	12.80%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	8.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.20%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.80%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.80%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	12.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.80%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	8.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.40%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.60%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.80%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.80%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010112	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019238	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019248	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020066	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT45_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030574	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030604	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J11755_117847002	3300000787	Soil	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAXAQNYVECTTAPPR*
JGI1027J11758_128081021	3300000789	Soil	MSKPVLDLSQHADEAFYAFXGRVSLXLVEHNVDAITATMFLRELVEAGGSTLHVEQAMAIAQNYVECATAPPR*
Ga0066395_103732761	3300004633	Tropical Forest Soil	IGKTRRMSTPVLERNHDDHEAFYAFIGRVSLQLVKHNVDAITVANFLRELVDAGGSALTVEQAMAIAQNYLPSSPELQSRAAQMRP*
Ga0058859_110584413	3300004798	Host-Associated	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVECATVPPR*
Ga0066675_102911122	3300005187	Soil	MSKPVLELHHDANEAFYAFIGRVSLQLVEHNVDAITAANFLRELVEAGGSALSVQEAMAIAQNYVTFGAPLPTGSPQPA*
Ga0065704_100198832	3300005289	Switchgrass Rhizosphere	MSKPVLDLSQHADEAFYAFIGRVSLRLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVECTTAPPR*
Ga0065705_100548982	3300005294	Switchgrass Rhizosphere	MSKPVLDLSQHADEAFYAFIGRVSLXLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVECTTAPPR*
Ga0065707_106341592	3300005295	Switchgrass Rhizosphere	LSQHADEAFYAFIGRVSLRLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVECTTAPPR*
Ga0066388_1007292492	3300005332	Tropical Forest Soil	MSKPVLELNQGAHETFYAFIGQVSLGLVEHNVDAITAANFLRELAEAGGSALSVEEARAIAQNYVTIC*
Ga0066388_1014072732	3300005332	Tropical Forest Soil	MSTPVLERNHDDHEAFYAFVGRVSLQLVEHNVDAITVANFLRELVDAGGSALTVEQAMAMAQNYLPSAPELQSRAAQMRP*
Ga0066388_1022560052	3300005332	Tropical Forest Soil	MSTPVLERHYDTHEAFYAFVGRVSLQLVEHNADAITVANFLRELVEAGGSALSVEQAMAIAQNYLPSAPGRLA*
Ga0066388_1065499571	3300005332	Tropical Forest Soil	MSQPILELNHDTDDAFYAFVGRVSFYLVEHNVDAITVANFLRELVEAGGSALSVEQAAAIAQNYLPSPLELQSGAARMRS*
Ga0070708_1001899302	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSTPVLERHHDTHEAFYAFVGRVSLQLVEHNVDAITVANFLRELVEAGGSALSVEQAMAIAQNYVPSSPGLQSRAARMRS*
Ga0070708_1003332122	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSKPVLDLNQGAHDAFYAFIGRVSLQLVEHNVDAITATNFLRELAEAGGSALSVEEAMAIAQNYVTLC*
Ga0070706_1002009412	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSKPVLELNQGAHEAFYAFIGRVSLGLVEHNVDAITAANFLRELAEAGGSALSVEEAMAIAQNYVTLC*
Ga0070707_1012456982	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSKPVLDLNQGAHDAFYAFIGRVSLQLVEHNVDAITATNFLRELAEAGGSALSVEEARAIAQNYVTIC*
Ga0066903_1000444018	3300005764	Tropical Forest Soil	MSTPVLERNHDDHEAFYAFVGRVSLQLVKHNVDAITVANFLRELVDAGGSALTVEQAMAIAQNYLPSSPELQSRAAQMRP*
Ga0081538_100416532	3300005981	Tabebuia Heterophylla Rhizosphere	MTKPKLDCSQHVREDFYAFIGRVSLRLVENNIDAITVTNFLREIMAAGVHTLTMEQAMDIAQNYVEFADA*
Ga0066658_107995691	3300006794	Soil	MSKPMLELNQGTHEAFYAFIGRVSLELVEHNVDAITAANFLRELAEAGGSALSVEEARAIAQNYVTIC*
Ga0066659_109861402	3300006797	Soil	MSKPVLELNQGAHEAFYAFIGRVSLGLVEHNVDAITAANFLRELAEAGGSALSVEEARAIAQNYVTLC*
Ga0075433_102013851	3300006852	Populus Rhizosphere	MSKPVLDLSQHADEAFYAFIGRVSLRLVEHNVDAITATMFLRELVEAGGSTLRVEQVLAIAQNDIECATAP
Ga0075420_1014674862	3300006853	Populus Rhizosphere	MSKPVPDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELVEAGSSTLRVEQAMAIAQNYVEYATAPPQ*
Ga0075425_1019584551	3300006854	Populus Rhizosphere	SKPVLDLSQHADEAFYAFIGRVSLRLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVECTTAPPR*
Ga0075424_1003158842	3300006904	Populus Rhizosphere	MSKPVLDLSQHADEVFYAFIGRVSLRLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVECTTAPPR*
Ga0099793_101506643	3300007258	Vadose Zone Soil	MSKPVLDLSQHADEAFYALIGRVSLLLVEQNVDAITITMFLRELVEAGGSTLRVEQVLAIAQNYIECATAPPQ*
Ga0066710_1041630361	3300009012	Grasslands Soil	RGRRMSKPVLELNQGAHEAFYAFIGRVSLELVEHNVDAITAANFLRELAEAGGSALSVEEARAIAQNYVTLC
Ga0099829_106287551	3300009038	Vadose Zone Soil	MSKPVLDLSQHADEAFYALIGRVSLRLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECATAPPR*
Ga0099828_104819413	3300009089	Vadose Zone Soil	MSSPVFERNDGTDETLYAFIGRVSLQLVEQNVDAITIANFLRELAEAGGSALSVEQAMAMA*
Ga0099827_100475891	3300009090	Vadose Zone Soil	MSKPVLDLSQHADEEFYALIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMA
Ga0075418_112362861	3300009100	Populus Rhizosphere	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVECTTAPPR*
Ga0066709_1029957902	3300009137	Grasslands Soil	MSKPVLELNQGAHEAFYAFIGRVSLELVEHNVDAITAANFLRELAEAGGSALSVEEARAIAQNYVTLC*
Ga0099792_112780921	3300009143	Vadose Zone Soil	MSKPVLDLSQHADEAFYALIGRVSLLLVEQNVDAITITMFLRELVEAGGSTLRVEQVLAIAQNDIECATAPPQ*
Ga0114129_123763152	3300009147	Populus Rhizosphere	MSKPVLDLSQYADEAFYAFIGRVSLRLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVECTTAPPR*
Ga0105061_10740752	3300009807	Groundwater Sand	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRMEQAMAIAQNYVECTTASPR*
Ga0105071_10245631	3300009808	Groundwater Sand	MDKPILDLRQDTNTEFYAFIGRVSLLLVEHNVDAITVTTFLREITEAGGNTLSTVQAMHIAQNYVDVAAA*
Ga0105084_11041662	3300009811	Groundwater Sand	MSKPVLDLSQHADEALYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECTTAPPR*
Ga0105076_10947412	3300009816	Groundwater Sand	MSKPVLDLSQHVDEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECTTAPPQ*
Ga0105066_10834281	3300009822	Groundwater Sand	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTIRVEQAMAIAQNYVECTTAPPR*
Ga0105068_11275082	3300009836	Groundwater Sand	DLRQDPNTEFYAFIGRVSLLLVEHNVDAITVTTFLREITEAGGNTLSTVQAMHIAQNYVDVAAA*
Ga0105074_10593502	3300010029	Groundwater Sand	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECTTASPR*
Ga0126380_105118022	3300010043	Tropical Forest Soil	MNKPVLELNQGTQEALYAFIGRVSLGLVEHNVDAITAANFLRELAEAGGSALSVEQAMAIALNYVTLC*
Ga0126384_112167052	3300010046	Tropical Forest Soil	MSTPVLERHHDTHEAFYAFVGRVSLQLVEHNVDAITAANFLRELVEAGGSALSVEQAMAIAQNYLPSAPGRLA*
Ga0126384_114923171	3300010046	Tropical Forest Soil	MDKPVLELNHDAHEAFYAFVGRVSLQLVEHNVDAITAANFLRELAAAGSSALSVEEAMAIAQNYVTFATPLPAGSPQPA*
Ga0126382_114202461	3300010047	Tropical Forest Soil	MSKPVLELNQGVHEALYAFIGRVSLGLVEHNVDAITAANFLRELAEAGGSALSVEEARAIAQNYVTIC*
Ga0127458_11007811	3300010112	Grasslands Soil	MSKPVLELNQGAHEAFYAFIGRVSLGLVEHNVDAITAANFLRELAEAGGSALSVEEARTIAQNYVMLC*
Ga0126320_13911401	3300010146	Soil	RYMSKPVLELHHDANEAFYAFIGRVSLQLVEHNVDAITAANFLRELVEAGGSALSVQEAMAIAQNYVTFGAPLPTGSPQPA*
Ga0126370_119758471	3300010358	Tropical Forest Soil	MSQPALAHNHDDHEAFYAFVGRVSLQLVEHNVDAITVANFLRELVEAGGSALSVEQAMAIAQNYLP
Ga0126376_126013802	3300010359	Tropical Forest Soil	MSKPVLELNQIAHEAFYAFIGRVSLGLVEHNVDAITAANFLRELAEAGGSALSVEEAKAIAQNYVTIC*
Ga0126377_111473971	3300010362	Tropical Forest Soil	MSKPVLELNQGVHQALYAFIGRVSLGLVEHNVDAITAANFLRELAEAGGSALSVEEARAI
Ga0126383_101513363	3300010398	Tropical Forest Soil	MSTPVLERNHDDHEAFYAFIGRVSLQLVKHNVDAITVANFLRELVDAGGSALTVEQAMAIAQNYLPSSPELQSRAAQMRP*
Ga0126383_133940982	3300010398	Tropical Forest Soil	MDKPVLELNHDAHEAFYAFVGRVSLQLVEHNVDAITAANFLRELAEAGGSALSVQEAMAIAQNYVTFAAPLPTGSHQPG*
Ga0134123_106647652	3300010403	Terrestrial Soil	MSKPVLDLSQHADEAFYAFIGRVSLVLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVEGATVPPR*
Ga0137424_10803661	3300011412	Soil	RSKPVLDRSQHVDEAFYAFMGLRLRLVEHHVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECATAPPR*
Ga0137428_11977931	3300011432	Soil	MSKPVLDLSQHADEAFYAFIGRVSLVLVEHNVDAITATMFLRELVEAGSSTLRVEQAMAIAQNYVECATSPPR*
Ga0137388_100618211	3300012189	Vadose Zone Soil	MSTPVFERNDGTDETLYAFIGRVSLQLVEQNVDAITIANFLRELAEAGGSALSVEQAMAMAQNYLASSPA*
Ga0137388_101011861	3300012189	Vadose Zone Soil	MIKPVLDLSQHADEAFYAFIGRVSVRLGEHHVDAITATMFLRELAEAGSSTLRMEQAMAMAQNSVAYATATPR*
Ga0137383_102113113	3300012199	Vadose Zone Soil	MLELNQGAHEAFYAFIGRVSLELVEHNVDAITAANFLRELAEAGGSALSVEEARAIAQNYVTLC*
Ga0137399_107962191	3300012203	Vadose Zone Soil	MSKPVLDLSQHADEAFYALIGRVSLLLVEQNVDAITITMFLRELVEAGGSTLRMEQAMAIAQNYVECATAPPQ*
Ga0137377_104872792	3300012211	Vadose Zone Soil	MLELNQGAHEAFYAFIGRVSLELVEHNVDAITAANFLRELAEAGGSTLSVEEARAIAQNYVTIC*
Ga0137386_107089331	3300012351	Vadose Zone Soil	MSKPVLDLSQHADEVFYALIGRVSLLLVEQNVDAITITMFLRELVEAGGSTLRVEQVLAIAQNYIECATAPPQ*
Ga0137360_112395422	3300012361	Vadose Zone Soil	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELVEAGGSALRVDQAMAIA*
Ga0137360_119056671	3300012361	Vadose Zone Soil	LVVAGSTTHAAHPGEDSAMSKPVLDLSQHADEAFYALIGRVSLLLVEQNVDAITITMFLRELVEAGGSTLRMEQAMAIAQNYVECATAPPQ*
Ga0137361_101684705	3300012362	Vadose Zone Soil	MSKPVLDLSQHADEAFYALIGRVSLLLVKQNVDAITVTMFLRELVEAGGSTLRVEQVLAIAQNDIECATAPPQ*
Ga0137361_103682772	3300012362	Vadose Zone Soil	MSKPFLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECTTTPPR*
Ga0137390_111773731	3300012363	Vadose Zone Soil	MSKPVLELNQGAHEAFYAFIGRVSLELVEHNVDAITAANFLRELAEAGGSALSVEEARAIAQNYVTIC*
Ga0134053_11461692	3300012406	Grasslands Soil	MSKPVLDLSQHVDEALYAFIGRVSLRLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNY
Ga0150984_1034486781	3300012469	Avena Fatua Rhizosphere	GHEAFYAFVGRVSLLLVEHNVDAITATMFLRELAEAGGSNLSMEQVMAIAQNYVEFAPTSPPALAPAGLSV*
Ga0137395_104966802	3300012917	Vadose Zone Soil	LVVAGSTTHAAHPGEDSAMSKPVLDLSQHADEAFYALIGRVSLLLVEQNVDAITVTMFLRELVEAGGSTLRMEQAMAIAQNYVECATAPPQ*
Ga0137419_116348671	3300012925	Vadose Zone Soil	LVVAGSTTHAAHPGEDSAMSKPVLDLSQHADEAFYALIGRVSLLLVEQNVDAITITMFLRELVEAGGSTLRVEQVLAIAQNDIECATAPPQ*
Ga0137407_103180363	3300012930	Vadose Zone Soil	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQVMAIAQNYVECATAPPR*
Ga0126375_119024221	3300012948	Tropical Forest Soil	MSKPVLELNQGVHEALYAFIGRVSLGLVEHNVDAITAANFLRELAEAGGAALSVEEAMTIAQNYVTLS*
Ga0164302_114480222	3300012961	Soil	VLDLSQHADEAFYALIGRVSLLLVEQNVDAITITMFLRELVEAGGSTLRVEQAMAIAQNYVECTSG*
Ga0126369_100530134	3300012971	Tropical Forest Soil	MSTPVLERNHDDHEAFYAFVGRVSLQLVEHNVDAITVANFLRELVDAGGSALTVEQAMAIAQNYLPSSPELQSRAAQMRP*
Ga0163162_111961881	3300013306	Switchgrass Rhizosphere	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELVEAGGSTLRVEQAMA
Ga0132255_1001952664	3300015374	Arabidopsis Rhizosphere	MSKPVLDLSQHADEAFYAFIGRVSLRLVEHNVDAITATMFLRELVEAGGSTLRVEEAMAIAQNYVEGATVPPR*
Ga0184638_12099701	3300018052	Groundwater Sediment	MIKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECTTAPPR
Ga0184626_101479932	3300018053	Groundwater Sediment	MIKPVLDLSQHADEAFYAFIGRVSLRLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVEYATAS
Ga0184637_105188052	3300018063	Groundwater Sediment	MSKPTLELNQDTDDALYAFIGRVSLRLVEHNVDAITAANFLRELAEAGGSALSVEQAMAIAQNYVTIG
Ga0184632_104355871	3300018075	Groundwater Sediment	MIKPVLDLSQHADEAFYAFIGRVSLRLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVEYTTAPPR
Ga0180119_11075583	3300019228	Groundwater Sediment	MSKPVLDLSQHADEAFYAFIGRVSLVLVEHNVDAITATMFLRELVEAGSSTLRVEQAMAIAQNYVEYATAPSQ
Ga0180119_13436563	3300019228	Groundwater Sediment	SKPVLDLSQHTDEAFYAFVGRVSLRLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECATTPPR
Ga0180116_10237491	3300019229	Groundwater Sediment	MSKPVLDLSQHTDEAFYAFVGRVSLRLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECATTPPR
Ga0180116_10388902	3300019229	Groundwater Sediment	MSKPVLDRSQHADEAFYAFMGRVRLRLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAHNDVEGATAPPR
Ga0180116_11885392	3300019229	Groundwater Sediment	MNKPLLDLSQHADEAFYAFIGRVSLRLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVAYTTTPPQ
Ga0184645_12558773	3300019233	Groundwater Sediment	MSKPVLDLSQHADEAFYALIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQVMAIAQNYVECTTAPPR
Ga0180112_10624851	3300019238	Groundwater Sediment	EAFYAFMGLRLRLVEHHVDAITATMFLRELVEAGGSTLRVEQAMAIAHNDVEGATAPPR
Ga0180117_13777682	3300019248	Groundwater Sediment	MNKPLLDLSQHADEAFYAFIGRVSLRLVEHNVNAITATMFLRELAEAGSSTLRVEQAMAIAQNYVAYTTTPPQ
Ga0184648_11803982	3300019249	Groundwater Sediment	MSKPVLDLSQHTDEAFYAFVGRVSLRLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVEYATAS
Ga0184641_11770511	3300019254	Groundwater Sediment	MSKPVLDLSQPADKAFYAFIGRVSLLLVEQNVDAITATMFLRELVEAGGSTLRVEQAMTIAQNYVACATAPPP
Ga0184646_10511721	3300019259	Groundwater Sediment	MIKPVLDLSQHADEAFYAFIGRVSLRLVGHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVEYATAS
Ga0180118_10308632	3300020063	Groundwater Sediment	PGEEKRMSKPVLDLSQHADEAFYAFIGRVSLVLVEHNVDAITATMFLRELVEAGSSTLRVEQAMAIAQNYVEYATAPSQ
Ga0180118_12491951	3300020063	Groundwater Sediment	SRPRPGEEKRMSKPVLDLSQHADEAFYAFIGRVSLRLVEHNVDAITATMFLRELVEAGSSTLRVEQAMAMAQNYVAYASAPPQ
Ga0180113_12874752	3300020065	Groundwater Sediment	MNKPLLDLSQHADEAFYAFIGRVSLRLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECATSPPR
Ga0180108_11942853	3300020066	Groundwater Sediment	MSKPVLDLSQHADEAFYAFIGRVSLRLVEHNVDAITATMFLRELVEAGSRTLRVEQAMAIAQNYVEYATAPP
Ga0180109_12471592	3300020067	Groundwater Sediment	VLDRSQHADEAFYAFMGRVRLRLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAHNDVEGATAPPR
Ga0212128_101093433	3300022563	Thermal Springs	MDKPVLELNQGAHEALYAFIGRVSLGLVEHNVDAITAANFLRELAEAGGSALSVEEARAIAQNYVTLC
Ga0207684_115866591	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSKPVLDLNQGAHDAFYAFIGRVSLQLVEHNVDAITATNFLRELAEAGGSALSVEEAMAIAQNYVTLC
Ga0207670_103588942	3300025936	Switchgrass Rhizosphere	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVECATVPPR
Ga0207712_104137812	3300025961	Switchgrass Rhizosphere	MSKPVLDLSQHADEAFYAFIGRVSLRLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVECTTAPPR
Ga0209899_10582451	3300027490	Groundwater Sand	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQVMAIAQNYVECTTAPPR
Ga0209887_10381361	3300027561	Groundwater Sand	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECTTAPPR
Ga0209874_11393172	3300027577	Groundwater Sand	MSKPVLDLSQHADEAFYALIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECTTAPPR
Ga0209180_104872092	3300027846	Vadose Zone Soil	MSKPVLDLSQHADEAFYALIGRVSLLLVEQNVDAITITMFLRELVEAGGSTLRVEQVLAIAQNYIECATAPPQ
Ga0209465_101842242	3300027874	Tropical Forest Soil	MSTPVLERNHDDHEAFYAFVGRVSLQLVEHNVDAITVANFLRELVDAGGSALTVEQAMAIAQNYLPSSPELQSRAAQMRP
Ga0209590_101526922	3300027882	Vadose Zone Soil	MSKPVLELNQGAHEAFYAFIGRVSLGLVEHNVDAITAANFLRELAEAGGSALSVEEARAIAQNYVTLC
Ga0209859_10698782	3300027954	Groundwater Sand	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECTTASPR
Ga0137415_101864531	3300028536	Vadose Zone Soil	MSKPVLDLSQHADEAFYALIGRVSLLLVEQNVDAITITMFLRELVEAGGSTLRVEQVLAIAQNDIECATAPPQ
Ga0247648_10459482	3300030574	Soil	EEKRMSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELVEAGSSTLRVEQAMAIAQNYVEYATAPPQ
Ga0247648_11217341	3300030574	Soil	MSKPVLDLSQHADEAFYAFIGRVSLRLVEHNVDAITATMFLRELVEAGSSTLRVEQAMAIAQNYVAYATAPPQ
Ga0247637_10779722	3300030604	Soil	MSKPVLDPSQRADEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECTTAPPR
Ga0308203_10713882	3300030829	Soil	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECATATPR
Ga0308198_10113252	3300030904	Soil	MSKPVLDLSQHADEAFYALIGRVSLLLVEQNVDAITITMFLRELVEAGGSTLRMEQAMAIAQNYVECATAPPQ
Ga0308198_10748241	3300030904	Soil	VLDLSQHADEAFYALIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECTTAPPR
Ga0308178_10347431	3300030990	Soil	ADEAFYALIGRVSLRLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECTTAPPR
Ga0308204_101798111	3300031092	Soil	MSKPVLDLSQHVDEALYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSRLRVEQAMAIAQNYVECTTAPPR
Ga0308199_10237182	3300031094	Soil	MSKPVLDLSQHADEAFYALIGRVSLRLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYIECATAPPQ
Ga0308187_100864722	3300031114	Soil	MSKPVLDLSQHADEAFYALIGRVSLLLVEQNVDAITVTMFLRELVEAGGSTLRMEQAMAIAQNYIECATAPPQ
Ga0308194_101690991	3300031421	Soil	HMSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECTTAPPR
Ga0310890_104114641	3300032075	Soil	MSKPVLDLSQHADEALYAFIGRVSLLLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVEGAIAPPR
Ga0307472_1011403962	3300032205	Hardwood Forest Soil	MSKPVLDLSQHADEAFYAFIGRASLRLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVECATAPPR
Ga0335085_123819561	3300032770	Soil	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELVEAGGSTLRVEQAMAIAQNYVECATAPPR
Ga0247830_106568422	3300033551	Soil	MSKPVLDLSQHADEALYAFIGRVSLLLVEHNVDAITATMFLRELVEAGSSTLRVEQAMAIAQNYVECTTAPPR
Ga0370545_140994_69_290	3300034643	Soil	MSKPVLDLSQHADEAFYAFIGRVSLRLVEHNVDAITATMFLRELVEAGGSTLRVEQAMTIAQNYVEGATAPPR
Ga0370548_076423_92_313	3300034644	Soil	MSKPVLDLSQHADEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECAIVPPR
Ga0370546_031049_570_758	3300034681	Soil	ADEAFYAFIGRVSLLLVEHNVDAITATMFLRELAEAGSSTLRVEQAMAIAQNYVECATATPR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067578

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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