Metagenome / Metatranscriptome Family F067622

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067622
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	49 residues
Representative Sequence	MKTVLTGIVLGIVFSIALIFGNRAFASDTLPDCAYMIWKHGRYICVDLD
Number of Associated Samples	66
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	90.40 %
% of genes near scaffold ends (potentially truncated)	33.60 %
% of genes from short scaffolds (< 2000 bps)	88.80 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.400 % of family members)
Environment Ontology (ENVO)	Unclassified (51.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.200 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 35.06% β-sheet: 12.99% Coil/Unstructured: 51.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00589	Phage_integrase	4.80
PF12833	HTH_18	3.20
PF13505	OMP_b-brl	2.40
PF00027	cNMP_binding	1.60
PF00248	Aldo_ket_red	1.60
PF13481	AAA_25	0.80
PF04392	ABC_sub_bind	0.80
PF12071	DUF3551	0.80
PF13545	HTH_Crp_2	0.80
PF00486	Trans_reg_C	0.80
PF02698	DUF218	0.80
PF06078	DUF937	0.80
PF02371	Transposase_20	0.80
PF00133	tRNA-synt_1	0.80
PF00239	Resolvase	0.80
PF03741	TerC	0.80
PF09250	Prim-Pol	0.80
PF01370	Epimerase	0.80
PF03734	YkuD	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.80
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.80
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.80
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.80
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.80
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.80
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.80
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.80
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.80
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.80
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.80
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.80
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.80
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.00 %
All Organisms	root	All Organisms	28.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.00 %
cellular organisms	root	All Organisms → cellular organisms	28.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.40 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.60 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.80 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.60 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.00 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.60 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.80 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.80 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.80 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.00 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	1.60 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.80 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.00 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.60 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.80 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.00 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.60 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.80 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.80 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10701525	Not Available	601	Open in IMG/M
3300005332\|Ga0066388_100196248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2636	Open in IMG/M
3300005332\|Ga0066388_100531496	Not Available	1808	Open in IMG/M
3300005332\|Ga0066388_101264639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1268	Open in IMG/M
3300005332\|Ga0066388_103725802	Not Available	778	Open in IMG/M
3300005332\|Ga0066388_104441722	Not Available	714	Open in IMG/M
3300005332\|Ga0066388_104975505	Not Available	675	Open in IMG/M
3300005332\|Ga0066388_106607185	Not Available	584	Open in IMG/M
3300005363\|Ga0008090_15278743	Not Available	540	Open in IMG/M
3300005764\|Ga0066903_100217075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2892	Open in IMG/M
3300005764\|Ga0066903_101228691	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300005764\|Ga0066903_101265323	Not Available	1375	Open in IMG/M
3300005764\|Ga0066903_102378166	Not Available	1024	Open in IMG/M
3300005764\|Ga0066903_103547294	Not Available	841	Open in IMG/M
3300005764\|Ga0066903_105389405	Not Available	675	Open in IMG/M
3300005764\|Ga0066903_109057598	Not Available	504	Open in IMG/M
3300006755\|Ga0079222_10187069	Not Available	1228	Open in IMG/M
3300006755\|Ga0079222_10575600	All Organisms → cellular organisms → Bacteria → Proteobacteria	851	Open in IMG/M
3300006804\|Ga0079221_10367047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	877	Open in IMG/M
3300006806\|Ga0079220_10235768	Not Available	1084	Open in IMG/M
3300006954\|Ga0079219_10192879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1145	Open in IMG/M
3300010048\|Ga0126373_10659456	Not Available	1102	Open in IMG/M
3300010048\|Ga0126373_10672617	Not Available	1092	Open in IMG/M
3300010048\|Ga0126373_10676034	Not Available	1089	Open in IMG/M
3300010048\|Ga0126373_11184193	Not Available	830	Open in IMG/M
3300010048\|Ga0126373_11707382	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300010048\|Ga0126373_12168842	Not Available	617	Open in IMG/M
3300010358\|Ga0126370_10308557	Not Available	1259	Open in IMG/M
3300010361\|Ga0126378_10076903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3219	Open in IMG/M
3300010361\|Ga0126378_10808436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1047	Open in IMG/M
3300010361\|Ga0126378_10873970	All Organisms → cellular organisms → Bacteria → Proteobacteria	1006	Open in IMG/M
3300010361\|Ga0126378_11183123	Not Available	863	Open in IMG/M
3300010361\|Ga0126378_13209473	Not Available	520	Open in IMG/M
3300010366\|Ga0126379_10352517	Not Available	1502	Open in IMG/M
3300010376\|Ga0126381_100473832	Not Available	1760	Open in IMG/M
3300010376\|Ga0126381_103039265	Not Available	666	Open in IMG/M
3300010376\|Ga0126381_103538838	Not Available	613	Open in IMG/M
3300012948\|Ga0126375_10199955	Not Available	1311	Open in IMG/M
3300016270\|Ga0182036_10937275	Not Available	711	Open in IMG/M
3300016294\|Ga0182041_10116936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1994	Open in IMG/M
3300016341\|Ga0182035_10056300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2696	Open in IMG/M
3300016341\|Ga0182035_10366679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1201	Open in IMG/M
3300016341\|Ga0182035_11513950	Not Available	604	Open in IMG/M
3300016357\|Ga0182032_10128164	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300016357\|Ga0182032_10460881	Not Available	1039	Open in IMG/M
3300016357\|Ga0182032_11389018	Not Available	608	Open in IMG/M
3300016357\|Ga0182032_11578485	Not Available	571	Open in IMG/M
3300016371\|Ga0182034_10559869	Not Available	960	Open in IMG/M
3300016371\|Ga0182034_10908525	Not Available	757	Open in IMG/M
3300016371\|Ga0182034_11411460	Not Available	609	Open in IMG/M
3300016387\|Ga0182040_10716136	Not Available	819	Open in IMG/M
3300016404\|Ga0182037_10011084	Not Available	5224	Open in IMG/M
3300016404\|Ga0182037_11708406	Not Available	561	Open in IMG/M
3300016422\|Ga0182039_10083388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2305	Open in IMG/M
3300016422\|Ga0182039_11845659	Not Available	554	Open in IMG/M
3300016445\|Ga0182038_10153664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1760	Open in IMG/M
3300016445\|Ga0182038_11023605	Not Available	732	Open in IMG/M
3300017959\|Ga0187779_10246067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	1131	Open in IMG/M
3300017974\|Ga0187777_10689682	Not Available	724	Open in IMG/M
3300017993\|Ga0187823_10271167	Not Available	581	Open in IMG/M
3300017994\|Ga0187822_10184861	Not Available	687	Open in IMG/M
3300021560\|Ga0126371_10195095	All Organisms → cellular organisms → Bacteria → Proteobacteria	2117	Open in IMG/M
3300021560\|Ga0126371_10252213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1879	Open in IMG/M
3300021560\|Ga0126371_10687641	Not Available	1171	Open in IMG/M
3300021560\|Ga0126371_11492539	Not Available	805	Open in IMG/M
3300021560\|Ga0126371_11665253	Not Available	763	Open in IMG/M
3300021560\|Ga0126371_11946381	Not Available	706	Open in IMG/M
3300021560\|Ga0126371_11991583	Not Available	698	Open in IMG/M
3300021560\|Ga0126371_11999659	Not Available	697	Open in IMG/M
3300021560\|Ga0126371_12823411	Not Available	589	Open in IMG/M
3300026879\|Ga0207763_1019599	Not Available	665	Open in IMG/M
3300026889\|Ga0207745_1012652	Not Available	775	Open in IMG/M
3300026981\|Ga0207822_1031323	Not Available	569	Open in IMG/M
3300026990\|Ga0207824_1039196	Not Available	503	Open in IMG/M
3300027039\|Ga0207855_1043834	Not Available	604	Open in IMG/M
3300027680\|Ga0207826_1050644	Not Available	1151	Open in IMG/M
3300027874\|Ga0209465_10033133	All Organisms → cellular organisms → Bacteria → Proteobacteria	2439	Open in IMG/M
3300031543\|Ga0318516_10511071	Not Available	689	Open in IMG/M
3300031545\|Ga0318541_10017102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3403	Open in IMG/M
3300031545\|Ga0318541_10115040	Not Available	1456	Open in IMG/M
3300031545\|Ga0318541_10199235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1108	Open in IMG/M
3300031545\|Ga0318541_10230723	Not Available	1027	Open in IMG/M
3300031546\|Ga0318538_10540147	Not Available	632	Open in IMG/M
3300031573\|Ga0310915_10106746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1898	Open in IMG/M
3300031573\|Ga0310915_10805712	Not Available	661	Open in IMG/M
3300031573\|Ga0310915_11300097	Not Available	501	Open in IMG/M
3300031668\|Ga0318542_10271827	Not Available	865	Open in IMG/M
3300031682\|Ga0318560_10714417	Not Available	542	Open in IMG/M
3300031719\|Ga0306917_11027174	Not Available	643	Open in IMG/M
3300031724\|Ga0318500_10044682	Not Available	1854	Open in IMG/M
3300031744\|Ga0306918_10016497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4362	Open in IMG/M
3300031744\|Ga0306918_10545544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	908	Open in IMG/M
3300031744\|Ga0306918_11345944	Not Available	548	Open in IMG/M
3300031744\|Ga0306918_11461305	Not Available	523	Open in IMG/M
3300031754\|Ga0307475_11410185	Not Available	537	Open in IMG/M
3300031771\|Ga0318546_10358604	Not Available	1015	Open in IMG/M
3300031793\|Ga0318548_10194342	Not Available	995	Open in IMG/M
3300031793\|Ga0318548_10207236	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300031794\|Ga0318503_10251313	Not Available	574	Open in IMG/M
3300031833\|Ga0310917_10016675	Not Available	4150	Open in IMG/M
3300031833\|Ga0310917_10112251	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300031833\|Ga0310917_10382135	Not Available	957	Open in IMG/M
3300031880\|Ga0318544_10367489	Not Available	559	Open in IMG/M
3300031890\|Ga0306925_10853046	Not Available	941	Open in IMG/M
3300031896\|Ga0318551_10045328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2199	Open in IMG/M
3300031910\|Ga0306923_12507857	Not Available	508	Open in IMG/M
3300031912\|Ga0306921_10203404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2320	Open in IMG/M
3300031912\|Ga0306921_10803669	Not Available	1074	Open in IMG/M
3300031912\|Ga0306921_11199844	Not Available	845	Open in IMG/M
3300031912\|Ga0306921_11506811	Not Available	735	Open in IMG/M
3300031942\|Ga0310916_11727854	Not Available	505	Open in IMG/M
3300031946\|Ga0310910_10217407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1486	Open in IMG/M
3300031946\|Ga0310910_10263018	Not Available	1351	Open in IMG/M
3300031954\|Ga0306926_10937533	Not Available	1034	Open in IMG/M
3300031954\|Ga0306926_12154623	Not Available	622	Open in IMG/M
3300031962\|Ga0307479_11991243	Not Available	530	Open in IMG/M
3300032001\|Ga0306922_11112336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	809	Open in IMG/M
3300032035\|Ga0310911_10237721	Not Available	1041	Open in IMG/M
3300032035\|Ga0310911_10284552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	950	Open in IMG/M
3300032042\|Ga0318545_10364508	Not Available	520	Open in IMG/M
3300032059\|Ga0318533_10984712	Not Available	618	Open in IMG/M
3300032065\|Ga0318513_10601643	Not Available	538	Open in IMG/M
3300033289\|Ga0310914_10706834	Not Available	904	Open in IMG/M
3300033290\|Ga0318519_10346110	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300033412\|Ga0310810_10162359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2580	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.40%
Aquatic	Environmental → Aquatic	1.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.40%
Freshwater	Environmental → Aquatic → Freshwater	1.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.20%
Loam	Environmental → Terrestrial → Soil → Loam	17.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.60%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.60%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	17.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026879	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 50 (SPAdes)	Environmental	Open in IMG/M
3300026889	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 57 (SPAdes)	Environmental	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_107015251	3300004633	Tropical Forest Soil	MKTVLTGIVLGIVFSIALIFGNRAFASDTLPDCMYMIWQHGRYICVDLDLNS*
Ga0066388_1001962483	3300005332	Tropical Forest Soil	MKTMATGIVLGIVFSIALIFSNRAFASDTLPSCEYMVWKHGRYICVDFDVNH*
Ga0066388_1005314962	3300005332	Tropical Forest Soil	MKTMATGIVLGIVFSIALIFSNRAFASDTLPSCDYMVWKHGRYICADFDVNH*
Ga0066388_1012646393	3300005332	Tropical Forest Soil	VKTVLTGIVLGIVFSIALIFGNRAFASDALPSCTYMIWKHGQFICVDLDTDW*
Ga0066388_1037258022	3300005332	Tropical Forest Soil	MKTVLTGIMLGIVFSIALIFSNRAFASDTLPSCPYMIWKHGQFICVDLGTDGE*
Ga0066388_1044417222	3300005332	Tropical Forest Soil	MRTVLTGLVLGIVFSIALIFGNRAFASDTLPDCAYMIWKHGRFICVDLDANS*
Ga0066388_1049755051	3300005332	Tropical Forest Soil	MKMVLTGMVLGIVLLIALIFGNRAFASDTLPNCAYMIWKQGQYICVDLDTSS*
Ga0066388_1066071851	3300005332	Tropical Forest Soil	MKTVLTGIVLGIVFSITLIFGNRVFASDTLPYCTYTIWQHGRYICIDLDLNS*
Ga0008090_152787432	3300005363	Tropical Rainforest Soil	MKTVLTGIVLGIVFSIALIFGNRAFASDTLPGCDYMIWKHGRYICVDLDADL*
Ga0066903_1002170753	3300005764	Tropical Forest Soil	MTTVLTGIVLGIVLSTALIFGNRALASDTLPGCDYMIWKHGRYICVDLDADL*
Ga0066903_1012286913	3300005764	Tropical Forest Soil	MKTVLTGIVLGIVFSIALIFGNRAFASDTLPYCTYMIWKQGQYICVDLDTNL*
Ga0066903_1012653232	3300005764	Tropical Forest Soil	MKTVLPGIVLGIVLSTALIFGNLALASDTLPNCDYMIWKHGRYICVDLDADR*
Ga0066903_1023781661	3300005764	Tropical Forest Soil	MKTVLTGIVLGIVFSIALIFGNRAFASDTLPYCTYMIWKQGQFICVDLDTNS*
Ga0066903_1035472942	3300005764	Tropical Forest Soil	MKTVLTGIVLGIVLSTALIFGNRALASDTLPNCDYMIWKHGRYICV
Ga0066903_1053894052	3300005764	Tropical Forest Soil	MKTVLTGIVVGVVFSVALVFSDRAFASDTLPSCPYMIWKQAQYVCVDLDTDW*
Ga0066903_1090575981	3300005764	Tropical Forest Soil	MKTVVLGIVFSIALIFGNRAFASDTLPSCVYMIWKQGQYICADLDTDW*
Ga0079222_101870691	3300006755	Agricultural Soil	MKTVLTGIVLGMAFSIAVIFGSRAFASDTLPDCAYMFWKHGRYICIDLDADW*
Ga0079222_105756001	3300006755	Agricultural Soil	MKTVLMGITLGILFSVALILNNRACASDTLPSCPYMIWKHGQYICVDLDNDW*
Ga0079221_103670471	3300006804	Agricultural Soil	MKTVLMGITLGILFSVALILNNRAFASDTLSSGPYMIWKHGQYICVDLDNDW*
Ga0079220_102357681	3300006806	Agricultural Soil	MKTVLTGIVLGMAFSIAVIFGSRAFASDTLSDCAYMFWKHGRYICIDLDTDW*
Ga0079219_101928792	3300006954	Agricultural Soil	MKTVLTGIVLGMAFSIAVIFGSRAFASDTLPDCAYMFWKHGRYICIDLDTDW*
Ga0126373_106594561	3300010048	Tropical Forest Soil	MKTMATGIVLGIVFSIALIFSNRAFASDTLPSCDYMV
Ga0126373_106726172	3300010048	Tropical Forest Soil	MKTVLTGFVLGIVFSIALIFCNRALASDTLPDCDYMIWKHGRYICVDLDAVM*
Ga0126373_106760342	3300010048	Tropical Forest Soil	MKTVLTGLVLGIVFSIALIFGNRAFASDTLPDCAYMIWKHGRVICVDLDANS*
Ga0126373_111841931	3300010048	Tropical Forest Soil	MKPLLTGIVLGIVFSIALTFGNRAFASDTLPDCDYMIWEAWAIHLR*
Ga0126373_117073822	3300010048	Tropical Forest Soil	MKPMVTGVVLGLVFSIVLIFSNRAFASDTLPSCPYMIWKHGQYICIDLDTNL*
Ga0126373_121688421	3300010048	Tropical Forest Soil	MKTALTGIALGIVFCIALIFSNRAFASDTLTSCPYLIWKQGQFICVDLDSDW*
Ga0126370_103085572	3300010358	Tropical Forest Soil	MKMVLTGIVVGVVFSVALVFSNRAFASDTLPSCPYMIWKQAQYVCVDLDTDW*
Ga0126378_100769039	3300010361	Tropical Forest Soil	MTTVLTGIVLGIVLSTALIFGNRALASDTLPGCDYMIWKHGRYICVDL
Ga0126378_108084363	3300010361	Tropical Forest Soil	VKTVLTGIVLGIVFSIALIFGNRAFASDALPSCTYMIWKQGQYICVDLDTDW*
Ga0126378_108739703	3300010361	Tropical Forest Soil	MKPLLTGIVLGIVFSIALTFGNRAFASDTLPDCDYMIWKHGRFICVDLDADL*
Ga0126378_111831231	3300010361	Tropical Forest Soil	CGGVNEERSMKTVLTGIVLGIVLSTALIFGNRALASDTLPNCDYMIWKHGRYICVDLDADL*
Ga0126378_132094732	3300010361	Tropical Forest Soil	MKTVLTGLVLGIVFSIALIFGNRAFASDTLPDCAYMIWKHGRFICVDLDANS*
Ga0126379_103525171	3300010366	Tropical Forest Soil	MKTVLTGIVLGIVFSITLIFGNRVFASDTLPYCTYTIWQHGRYICIDLELNS*
Ga0126381_1004738324	3300010376	Tropical Forest Soil	MKPLLTGIVLGIALSNALIFGNRAFTSDTLPGCDYMIWKHGRYICVDLDADL*
Ga0126381_1030392652	3300010376	Tropical Forest Soil	MKTMATGIVLGIVFSIALIFRNRAFASDTLPSCEYMVWKHGRYICVDFDVNH*
Ga0126381_1035388381	3300010376	Tropical Forest Soil	MKTALTGIVLGIVLLIALIFGNRAFASETLPSCAYMIWNQGRYICVDLDHNS*
Ga0126375_101999552	3300012948	Tropical Forest Soil	MKTVLTGIVLVIVFSIALIFTNRAFASDALPYCPYMIWKQGQYICVDLDTDW*
Ga0182036_109372752	3300016270	Soil	MKTVLTGIVFSNALIFSNRAFASDTLPSCPYMIWKHGQFICVDLDTDW
Ga0182041_101169364	3300016294	Soil	LGIVFLIALVFGNRAFASDTLPDCGYMIWKHGRYICVDLDLNS
Ga0182035_100563002	3300016341	Soil	MKTVLTGIVLGILFSITLIFGNRAFASDTLPSCAYMIWKPAGQFICVDLDTNS
Ga0182035_103666791	3300016341	Soil	VPELARSFPVKTVLTGIVLGIVFLIALVFGNRAFASDTLPDCGYMIWKHGRYICVDLDLN
Ga0182035_115139501	3300016341	Soil	MKTVLTGIVLGIVFSIALIFGNRAFASDTLPDCAYMIWKHGRY
Ga0182032_101281643	3300016357	Soil	LMKAVLTGIVLGIVFSIALIFGNRAFASDALPSCTYIIWQHGQFICADLETDS
Ga0182032_104608814	3300016357	Soil	MKMVLTGIVLGIVFLIALIFGNRAFASDTLPDCAYMIWK
Ga0182032_113890181	3300016357	Soil	VKTVLTGIVLGIVFLIALVFGNRAFASDTLPDCAYMIWK
Ga0182032_115784851	3300016357	Soil	MKTVLTGIVLGFVFSIALIFGNRAFASNMLPDCAYMIWKHGRYICP
Ga0182034_105598693	3300016371	Soil	MKTVLTGIVLGIVFLIALIFGNRAFASDTLPDCAYMIWKHGRY
Ga0182034_109085252	3300016371	Soil	MKTVLMGIVFSIALIFGNRAFASDALPYCTYTIWKQGQYICVDLDTNW
Ga0182034_114114601	3300016371	Soil	MKTVLTGIVVGVVFSVALVFSNRAFASDTLPSCPYMIWKQAQYVCVDLDTDW
Ga0182040_107161361	3300016387	Soil	VPELARSFPVKTVLTGIVLGIVFLIALVFGNRAFASDTLPDCAYMIWKHGRYICVDLDLN
Ga0182037_100110847	3300016404	Soil	VGLGPASMNSMKTVVTGIVLGIVFSIALIFSNRAFASDALPSCDYVWKHGRYKCADLDIN
Ga0182037_117084063	3300016404	Soil	PMKPMVTGVVLGLVFSIVLIFSNRAFASDTLPSCPYMIWKHGQFICVDLDTDW
Ga0182039_100833883	3300016422	Soil	MKTVLTGIVLGIVFLIALVFGNRAFASDTLPDCAYMIWKHARYICVDLDLNS
Ga0182039_118456591	3300016422	Soil	MKTVLMGIVFSIALIFGKRAFASDTLPYCTYTMWKQGQYICVDLDTNW
Ga0182038_101536642	3300016445	Soil	MKTALTGIVLGIVFSIALIFGNRAFASDTLPDCAYMIWKHGRFICVDSDTNS
Ga0182038_110236051	3300016445	Soil	MKTVLTGIVLGIVFLIALIFGNRAFASDTLPDCAYMIWKHGRYICV
Ga0187779_102460672	3300017959	Tropical Peatland	MKTVLTGIVLGIVFSIALVFSNRAFASDTLPSCQYMIWKHGQFICADLDTDGE
Ga0187777_106896821	3300017974	Tropical Peatland	MKAVLTSIMLGIVFSIALTSANRGFASDTLPSCEYMIWKHGQFICGDLDIDGE
Ga0187823_102711672	3300017993	Freshwater Sediment	MKPVLTGIVVGIVFSIALIFSNRAFASDALPSCPYMIWKHGQFICADLDSDGE
Ga0187822_101848611	3300017994	Freshwater Sediment	MKTVLTGMMLGIVFSIALIFSNRAFASDTLPSCPFTIWKHGQFICVDL
Ga0126371_101950953	3300021560	Tropical Forest Soil	MKPLLTGIVLGIVFSIALTFGNRAFASDTLPDCDYMIWKHGRFICVDLDADL
Ga0126371_102522131	3300021560	Tropical Forest Soil	MTTVLTGIVLGIVLSTALIFGNRALASDTLPGCDYMIWKHGRYICVDLDADL
Ga0126371_106876412	3300021560	Tropical Forest Soil	MKPLLTGIVLGIAFSIALIFGNRAFASDTLPGCDYMIWKHGRYICVDLDADL
Ga0126371_114925391	3300021560	Tropical Forest Soil	MKTVLTGFVLGIVFSIALIFGNRALASDTLPNCDYMIWKHGRY
Ga0126371_116652532	3300021560	Tropical Forest Soil	MKMVLTGIVLGIVFLIALIFGNRAFASDSLPDCAYMIWKHGRYICVDLDADS
Ga0126371_119463812	3300021560	Tropical Forest Soil	MKTVLTGIVVGVVFSVALVFSDRAFASDTLPSCPYMIWKQAQYVCVDLDTDW
Ga0126371_119915831	3300021560	Tropical Forest Soil	MKTVLTGIVLGIVFSITLIFGNRVFASDTLPYCTYTIWQHGRYICIDLELNS
Ga0126371_119996592	3300021560	Tropical Forest Soil	MKTMATGIVLGIVFSIALIFSNRAFASDTLPSCDYMVWKHGRYICADFDVNH
Ga0126371_128234111	3300021560	Tropical Forest Soil	MKTALTGIALGIVFCIALIFSNRAFASDTLTSCPYLIWKQGQFICVDLDSDL
Ga0207763_10195991	3300026879	Tropical Forest Soil	MKTVLTGIVFSIALVFSNRAFASDTLPDCGYMIWKHGRYICVDLDLNS
Ga0207745_10126523	3300026889	Tropical Forest Soil	MKTVLTGIVLGIVFLIALIFGNRAFASDTLPDCAYMIWKHGRYICVD
Ga0207822_10313231	3300026981	Tropical Forest Soil	MKTMLTGIVLGIVFSIALVFSNRAFASDTLPSCQYMIWKHGQFICADLDTDGE
Ga0207824_10391962	3300026990	Tropical Forest Soil	MKTVLTGIVLGIVFLIALIFGNRAFASDTLPDCAYMIWKHGRYICVDLDLNS
Ga0207855_10438342	3300027039	Tropical Forest Soil	MKTVLTGIVLGIVFSIALVFSNRAFASDTMPICQYMIWKHGQFICADLDTDGE
Ga0207826_10506441	3300027680	Tropical Forest Soil	MKTVLKGIVLGIVFSIALVFSNRAFASDTLPSCQYMIWKHGQFICADLDTDGA
Ga0209465_100331332	3300027874	Tropical Forest Soil	MKTVLTGIVLGIVFSIALIFGNRAFASDTLPDCMYMIWQHGRYICVDLDLNS
Ga0318516_105110711	3300031543	Soil	VGLGPTSMNSMKTVVTGIVLGIVFSIALIFSNRAFASDALPSCDYVWKHGRYICADLDIN
Ga0318541_100171023	3300031545	Soil	MKTVLTGIVLGIVFLIALVFGNRAFASDTLPDCAYMIWKHGRYICVDLDLNS
Ga0318541_101150403	3300031545	Soil	MKTMATGIVLGIVFSIALIFSNRAFASDTLPSCEYMVWKHGRYICVDFDVNH
Ga0318541_101992353	3300031545	Soil	MKTVLTGIVLGILFSITLIFGNRAFASDTLPSCAYMIWKPAGQFICVDLDT
Ga0318541_102307232	3300031545	Soil	MKTVLTGILFSIALIFGNRAFASDALPSCTYIIWQHGQFICADLETDS
Ga0318538_105401473	3300031546	Soil	MKTVLTGIVLGIVFLIALVFGNRAFASDTLPDCAYMIWKHGRY
Ga0310915_101067463	3300031573	Soil	VKTVLTGIVLGIVFLIALVFGNRAFASDTLPDCGYMIWKHGRYICVDLDLNS
Ga0310915_108057121	3300031573	Soil	MKTVLTGIVLGFVFSIALIFGNRAFASDMLPDCAYMIWKHGRYICPDLDSDS
Ga0310915_113000971	3300031573	Soil	MKTVLTGIVLGIVFSIALIFGNRAFASDTLPDCAYMIWKHGRYICVDLDPN
Ga0318542_102718271	3300031668	Soil	MKTMATGIVLGIVFSIALIFSNRAFASDTLPSCDYMVWKHGRYICADLDINH
Ga0318560_107144172	3300031682	Soil	VKTVLTGIVLGIVFLIALVFGNRAFASDTLPDCGYMIWK
Ga0306917_110271742	3300031719	Soil	MKTVLTGIVLGFVFSIALIFGNRAFASNMLPDCAYMIWKHGRYICPDLDSDS
Ga0318500_100446822	3300031724	Soil	MNSMKTVVTGIVLGIVFSIALIFSNRAFASDALPSCDYVWKHGRYICADLDINH
Ga0306918_100164975	3300031744	Soil	VELGPASMNSMKTVVTGIVLGIVFSIALIFSNRAFASDALPSCDYVWKHGRYICADLDIN
Ga0306918_105455442	3300031744	Soil	MKTMVTGIVLGLVFSIVLIFSNRAFASDTLPSCPYMIWKHGQFICVDLDTDW
Ga0306918_113459441	3300031744	Soil	MKTVLTGIVLGIVFSIALIFGNRAFASDTLPDCAYMIWKHGRYICV
Ga0306918_114613051	3300031744	Soil	MKTVLMGIVFSIALIFGNRAFASDTLPCCTYTIWKQGQYTDR
Ga0307475_114101851	3300031754	Hardwood Forest Soil	MKTVVTGIVLGIAFSIALIFANRAFASDALPDCAYMIWKHGRYICADLNVNH
Ga0318546_103586041	3300031771	Soil	MNTIATGIVLGIVFSIALIFSNRAFASDTLPSCEYMVWKHGRYICVDFDVNH
Ga0318548_101943421	3300031793	Soil	MKTVLTGIVLGILFSITLIFGNRAFASDTLPSCAYMI
Ga0318548_102072362	3300031793	Soil	MKTMATGIVLGIVFSIALIFSNRAFASDTLPSCEYMVWKHGRHICV
Ga0318503_102513131	3300031794	Soil	MKTVLTGIVLGIVFSISLIFGNRAFASDTLPSCAYMIWKHGQY
Ga0310917_100166755	3300031833	Soil	VGLGPASMNSMKTVVTGIVLGIVFSIALIFSNRAFASDALPSCDYVWKHGRYICADLDIN
Ga0310917_101122511	3300031833	Soil	MATGIVLGIVFSIALIFSNRAFASDTLPSCEYMVWKHGRYICVDFDVNH
Ga0310917_103821351	3300031833	Soil	MKTVLMGIVFSIALIFGNRAFASDTLPCCTYTIWKQGQ
Ga0318544_103674892	3300031880	Soil	MKTVLTGIVLGIVFLIALIFGNRAFASDTLPDCAYMIWKHA
Ga0306925_108530461	3300031890	Soil	MKTVLTGIVVGVVFSVALAFSDRAFASDTLPSCPYMIWKQSAIRLC
Ga0318551_100453283	3300031896	Soil	MKTVLAGIVLGIVFSIALIFGNRAFASDTLPDCAYMIWKHGRFICVDSDTNS
Ga0306923_125078572	3300031910	Soil	VLGLVFSNALIFSNRAFASDTLPYCPYMIWKYAQYTCVDLDSHW
Ga0306921_102034045	3300031912	Soil	VKTVLTGIVLGIVFLIALVFGNRAFASDTLPDCGY
Ga0306921_108036691	3300031912	Soil	MKTVLTGIVVGVVFSVTLVFSNRAFASDTLPSCPYMIWKQAQYVCVDLDTDW
Ga0306921_111998442	3300031912	Soil	MKPVLTGIVLGIVFSISLIFGNRAFASDTLPSCAYMIWKHGQYICVDLNTNL
Ga0306921_115068111	3300031912	Soil	MKTVLMGIVFSIALIFGNRAFASDTLPYCTYTIWKQGQYICVDLDTNW
Ga0310916_117278541	3300031942	Soil	MKTVLTGIVLGIVFSIALIFGNRAFASDTLPDCAYMIWKHGRYICVDLD
Ga0310910_102174072	3300031946	Soil	MKTVLTGIVLGIVFLIALVFGNRAFASDTLPDCGYMIWKHGRYICVDLDLNS
Ga0310910_102630181	3300031946	Soil	MKTVLTGILFSIALIFGNRAFASDALPSCTYIIWQHGQFIC
Ga0306926_109375331	3300031954	Soil	MKTVLMGIVFSIALIFGNRAFASDALPYCTYTIWK
Ga0306926_121546231	3300031954	Soil	MKTVLTGIVLGIVFSIALIFGNRAFASDTLPDCAYMIWKHGRYICVDLDPNS
Ga0307479_119912432	3300031962	Hardwood Forest Soil	RLPMKTVVTGIVLGIAFSIALIFANRAFASDALPDCAYMIWKHGRYICADLNVNH
Ga0306922_111123361	3300032001	Soil	MKPVLTGIVLGIVFSISLIFGNRAFASDTLPSCAYMIW
Ga0310911_102377212	3300032035	Soil	MKTMATGIVLGIVFSIALIFSNRAFASDTLPSCEYMVWKHGRYIRVDFDVNH
Ga0310911_102845522	3300032035	Soil	PVKTVLTGIVLGIVFLIALVFGNRAFASDTLPDCGYMIWKHGRYICVDLDLNS
Ga0318545_103645082	3300032042	Soil	TGIVLGIVFSIALIFSNRAFASDALPSCDYVWKHGRYICADLDINH
Ga0318533_109847121	3300032059	Soil	MKTVLTGIVLGIVFLIALVFGNRAFASDTLPDCAYMIWKHG
Ga0318513_106016431	3300032065	Soil	MKTVLTGIVLGIVFLIALIFGNRAFASDTLPDCAYMIWKHARYICVDLD
Ga0310914_107068342	3300033289	Soil	MKTVLTGIVLGIVFSIALIFGNRAFASDTLPDCAYMIWKH
Ga0318519_103461102	3300033290	Soil	MKTVLTGIVLGILFSITLIFGNRAFASDTLPSCAYM
Ga0310810_101623594	3300033412	Soil	MKTVLTGIVLGIVFSIALIFSNRAFASDTLPSCPYMIWKHAQYICVDLDGDW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067622

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences