Metagenome / Metatranscriptome Family F067711

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067711
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	122 residues
Representative Sequence	MRALGGVIIALIGFAMLPATAPAAPMDGSAPMLCALSSVVECSRKGECERSTAEDAAVPPFVRINVPQRILSSVDGARTSPITSVQRTNGYVMIQGMQNERVWGAVIEEQTGQMTATVGEHDGAIVMSGMCIAP
Number of Associated Samples	102
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.60 %
% of genes near scaffold ends (potentially truncated)	37.60 %
% of genes from short scaffolds (< 2000 bps)	82.40 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.800 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (11.200 % of family members)
Environment Ontology (ENVO)	Unclassified (46.400 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.400 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 8.02% β-sheet: 42.59% Coil/Unstructured: 49.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.4.1.1: Outer membrane protein	d1qjpa_	1qjp	0.66364
f.4.1.0: automated matches	d3qraa_	3qra	0.66084
b.60.1.6: Phenolic acid decarboxylase (PAD)	d2w2aa_	2w2a	0.65192
f.4.1.4: PsbO-like	d5b5eo_	5b5e	0.64835
f.4.4.0: automated matches	d2x55a1	2x55	0.64383

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13436	Gly-zipper_OmpA	16.00
PF00196	GerE	13.60
PF09917	DUF2147	12.80
PF13441	Gly-zipper_YMGG	12.00
PF04366	Ysc84	3.20
PF04055	Radical_SAM	3.20
PF05193	Peptidase_M16_C	1.60
PF13488	Gly-zipper_Omp	1.60
PF13387	DUF4105	0.80
PF00441	Acyl-CoA_dh_1	0.80
PF00871	Acetate_kinase	0.80
PF14707	Sulfatase_C	0.80
PF03781	FGE-sulfatase	0.80
PF04140	ICMT	0.80
PF02518	HATPase_c	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	3.20
COG0282	Acetate kinase	Energy production and conversion [C]	0.80
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.80
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.80
COG3426	Butyrate kinase	Energy production and conversion [C]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.80 %
Unclassified	root	N/A	39.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.80 %
Unclassified	root	N/A	39.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.80 %
Unclassified	root	N/A	39.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.20 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	6.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.20 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	6.40 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.60 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.20 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	6.40 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6.40 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.20 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	4.80 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.80 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.80 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.20 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	4.00 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.80 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.80 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.20 %
unclassified Paraburkholderia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia	1.60 %
Paraburkholderia sprentiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia sprentiae	0.80 %
Paraburkholderia caledonica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia caledonica	0.80 %
Paraburkholderia tuberum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tuberum	0.80 %
Desulfoferrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulfoferrobacter	0.80 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.80 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.20 %
Paraburkholderia sp. BL10I2N1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL10I2N1	1.60 %
Desulfoferrobacter suflitae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulfoferrobacter → Desulfoferrobacter suflitae	0.80 %
Paraburkholderia sprentiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia sprentiae	0.80 %
Paraburkholderia caledonica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia caledonica	0.80 %
Paraburkholderia tuberum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tuberum	0.80 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.80 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2406241	Not Available	2072	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101922023	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300000891\|JGI10214J12806_10466794	Not Available	629	Open in IMG/M
3300000956\|JGI10216J12902_110248807	Not Available	714	Open in IMG/M
3300004022\|Ga0055432_10039426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1086	Open in IMG/M
3300004114\|Ga0062593_103265486	Not Available	520	Open in IMG/M
3300004156\|Ga0062589_101067406	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300004479\|Ga0062595_100846128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	761	Open in IMG/M
3300004480\|Ga0062592_100481165	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300005218\|Ga0068996_10146534	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005294\|Ga0065705_11027618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL10I2N1	540	Open in IMG/M
3300005295\|Ga0065707_10004753	All Organisms → cellular organisms → Bacteria → Proteobacteria	5126	Open in IMG/M
3300005295\|Ga0065707_10111080	Not Available	2406	Open in IMG/M
3300005330\|Ga0070690_100585974	All Organisms → cellular organisms → Bacteria → Proteobacteria	845	Open in IMG/M
3300005330\|Ga0070690_100645019	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300005331\|Ga0070670_100834389	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300005331\|Ga0070670_101069582	All Organisms → cellular organisms → Bacteria → Proteobacteria	735	Open in IMG/M
3300005332\|Ga0066388_100559771	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300005340\|Ga0070689_100078242	All Organisms → cellular organisms → Bacteria → Proteobacteria	2593	Open in IMG/M
3300005340\|Ga0070689_100381571	Not Available	1188	Open in IMG/M
3300005345\|Ga0070692_10744633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL10I2N1	664	Open in IMG/M
3300005353\|Ga0070669_100378768	All Organisms → cellular organisms → Bacteria → Proteobacteria	1154	Open in IMG/M
3300005353\|Ga0070669_100411008	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300005438\|Ga0070701_10141835	Not Available	1375	Open in IMG/M
3300005440\|Ga0070705_100495107	All Organisms → cellular organisms → Bacteria → Proteobacteria	927	Open in IMG/M
3300005444\|Ga0070694_100328084	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300005444\|Ga0070694_101753875	Not Available	529	Open in IMG/M
3300005471\|Ga0070698_100366348	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300005526\|Ga0073909_10022808	All Organisms → cellular organisms → Bacteria → Proteobacteria	2061	Open in IMG/M
3300005526\|Ga0073909_10281391	Not Available	749	Open in IMG/M
3300005536\|Ga0070697_100863695	Not Available	802	Open in IMG/M
3300005536\|Ga0070697_100991383	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005546\|Ga0070696_100278392	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300005546\|Ga0070696_100720229	Not Available	815	Open in IMG/M
3300005549\|Ga0070704_100176971	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300005615\|Ga0070702_100209586	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300005617\|Ga0068859_100161786	All Organisms → cellular organisms → Bacteria → Proteobacteria	2317	Open in IMG/M
3300005618\|Ga0068864_100166228	All Organisms → cellular organisms → Bacteria → Proteobacteria	2009	Open in IMG/M
3300005713\|Ga0066905_102181245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia caledonica	516	Open in IMG/M
3300005764\|Ga0066903_100108681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3790	Open in IMG/M
3300005764\|Ga0066903_106631391	Not Available	602	Open in IMG/M
3300005840\|Ga0068870_10404898	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300005841\|Ga0068863_102600238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tuberum	515	Open in IMG/M
3300006034\|Ga0066656_10085763	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300006578\|Ga0074059_10888250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia sprentiae	507	Open in IMG/M
3300006871\|Ga0075434_100144404	All Organisms → cellular organisms → Bacteria → Proteobacteria	2400	Open in IMG/M
3300007076\|Ga0075435_100596975	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300009012\|Ga0066710_101071314	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1246	Open in IMG/M
3300009038\|Ga0099829_10274714	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300009093\|Ga0105240_11095349	Not Available	848	Open in IMG/M
3300009098\|Ga0105245_11215141	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300009148\|Ga0105243_10760630	Not Available	951	Open in IMG/M
3300009157\|Ga0105092_10934823	Not Available	513	Open in IMG/M
3300009174\|Ga0105241_11280496	Not Available	697	Open in IMG/M
3300009177\|Ga0105248_10354112	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300009177\|Ga0105248_10881309	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300009553\|Ga0105249_10005545	All Organisms → cellular organisms → Bacteria	10905	Open in IMG/M
3300009553\|Ga0105249_10035984	All Organisms → cellular organisms → Bacteria	4492	Open in IMG/M
3300009792\|Ga0126374_10143971	All Organisms → cellular organisms → Bacteria → Proteobacteria	1433	Open in IMG/M
3300009813\|Ga0105057_1109601	Not Available	518	Open in IMG/M
3300010046\|Ga0126384_12245601	Not Available	526	Open in IMG/M
3300010359\|Ga0126376_10867383	Not Available	889	Open in IMG/M
3300010361\|Ga0126378_10616558	All Organisms → cellular organisms → Bacteria → Proteobacteria	1199	Open in IMG/M
3300010366\|Ga0126379_12509865	Not Available	614	Open in IMG/M
3300010376\|Ga0126381_100487956	Not Available	1735	Open in IMG/M
3300010376\|Ga0126381_100690927	All Organisms → cellular organisms → Bacteria → Proteobacteria	1459	Open in IMG/M
3300010397\|Ga0134124_12902397	Not Available	523	Open in IMG/M
3300010400\|Ga0134122_10532821	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300010401\|Ga0134121_12519760	Not Available	557	Open in IMG/M
3300012204\|Ga0137374_10109354	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2578	Open in IMG/M
3300012206\|Ga0137380_10264252	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1549	Open in IMG/M
3300012207\|Ga0137381_11365539	Not Available	601	Open in IMG/M
3300012209\|Ga0137379_11411508	Not Available	599	Open in IMG/M
3300012350\|Ga0137372_10156508	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1857	Open in IMG/M
3300012353\|Ga0137367_10072374	All Organisms → cellular organisms → Bacteria	2556	Open in IMG/M
3300012354\|Ga0137366_10069114	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2691	Open in IMG/M
3300012357\|Ga0137384_10910938	Not Available	708	Open in IMG/M
3300012359\|Ga0137385_10518523	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1008	Open in IMG/M
3300012360\|Ga0137375_10399666	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300012361\|Ga0137360_10283178	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1372	Open in IMG/M
3300012922\|Ga0137394_11339344	Not Available	578	Open in IMG/M
3300012930\|Ga0137407_11373167	Not Available	671	Open in IMG/M
3300012961\|Ga0164302_10630429	Not Available	782	Open in IMG/M
3300012976\|Ga0134076_10140098	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	984	Open in IMG/M
3300013306\|Ga0163162_10294836	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300013308\|Ga0157375_11196550	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300014154\|Ga0134075_10445325	Not Available	575	Open in IMG/M
3300014262\|Ga0075301_1137544	Not Available	559	Open in IMG/M
3300014269\|Ga0075302_1210190	Not Available	502	Open in IMG/M
3300014326\|Ga0157380_10182647	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300014968\|Ga0157379_10244716	Not Available	1627	Open in IMG/M
3300014968\|Ga0157379_11811355	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300015201\|Ga0173478_10128076	Not Available	978	Open in IMG/M
3300015371\|Ga0132258_10419764	All Organisms → cellular organisms → Bacteria → Proteobacteria	3328	Open in IMG/M
3300015373\|Ga0132257_101352497	Not Available	905	Open in IMG/M
3300017959\|Ga0187779_10931950	Not Available	599	Open in IMG/M
3300017974\|Ga0187777_10888900	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300018058\|Ga0187766_10011980	All Organisms → cellular organisms → Bacteria	4962	Open in IMG/M
3300018060\|Ga0187765_10005324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5462	Open in IMG/M
3300018060\|Ga0187765_10161028	Not Available	1273	Open in IMG/M
3300018060\|Ga0187765_10441256	All Organisms → cellular organisms → Bacteria → Proteobacteria	812	Open in IMG/M
3300021560\|Ga0126371_11148409	Not Available	915	Open in IMG/M
3300025569\|Ga0210073_1091940	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300025923\|Ga0207681_10265236	Not Available	1346	Open in IMG/M
3300025923\|Ga0207681_10535231	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300025930\|Ga0207701_11026804	Not Available	686	Open in IMG/M
3300025930\|Ga0207701_11058785	Not Available	674	Open in IMG/M
3300025935\|Ga0207709_11369029	Not Available	586	Open in IMG/M
3300025941\|Ga0207711_10629361	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300025942\|Ga0207689_10502646	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300025960\|Ga0207651_11320209	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300025961\|Ga0207712_10032380	All Organisms → cellular organisms → Bacteria → Proteobacteria	3529	Open in IMG/M
3300025961\|Ga0207712_10084441	All Organisms → cellular organisms → Bacteria	2320	Open in IMG/M
3300025961\|Ga0207712_10224853	All Organisms → cellular organisms → Bacteria → Proteobacteria	1503	Open in IMG/M
3300026018\|Ga0208418_1039262	Not Available	512	Open in IMG/M
3300026035\|Ga0207703_10120726	All Organisms → cellular organisms → Bacteria	2250	Open in IMG/M
3300026116\|Ga0207674_10092040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3022	Open in IMG/M
3300028380\|Ga0268265_11065822	Not Available	801	Open in IMG/M
3300028381\|Ga0268264_10077779	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Desulfoferrobacter → Desulfoferrobacter suflitae	2826	Open in IMG/M
3300031720\|Ga0307469_12386598	Not Available	516	Open in IMG/M
3300032174\|Ga0307470_10679403	Not Available	782	Open in IMG/M
3300032174\|Ga0307470_11028778	Not Available	657	Open in IMG/M
3300032180\|Ga0307471_100553600	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300032180\|Ga0307471_101806512	Not Available	763	Open in IMG/M
3300032180\|Ga0307471_103661987	Not Available	544	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.60%
Host-Associated	Host-Associated	30.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.40%
Plants	Host-Associated → Plants	30.40%
Aquatic	Environmental → Aquatic	3.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.60%
Marine	Environmental → Aquatic → Marine	2.40%
Freshwater	Environmental → Aquatic → Freshwater	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.40%
Loam	Environmental → Terrestrial → Soil → Loam	16.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.60%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.80%
Sand	Environmental → Terrestrial → Soil → Sand	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.20%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.80%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	6.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.20%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.20%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.40%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.40%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.60%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.80%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026018	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_24062411	3300000033	Soil	AVPAAPLDGSAPILCALSSVVECGRKGGCERGSSEETGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMSATAVEADGAFVLIGTCIAP*
INPhiseqgaiiFebDRAFT_1019220232	3300000364	Soil	MRALSGVIGALIGLAMLPATVPAAPMDGSTPMLCALSSVVECSRKGECERSSAEDAAVPPFVRINVPQRVLSSVDXARTSPITAVQRTNGRLMIQGMQNERVWGAVIEEQTGQMMATVGEHDGAIVMSGMCIAP*
JGI10214J12806_104667942	3300000891	Soil	VIGALIGFAMLPGTAPAAPMVIRTKGGTDRAHSMGAEPSNIPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP*
JGI10216J12902_1102488071	3300000956	Soil	MRALSGVIGALIGLATLPATVPAAPMDGSTPMLCALSSVVECSRKGECERSSAEDAAVPPFVRINVPQRVLSSVDGARTSPITAVQRTNGRLMIQGMQNERVWGAVIEEQTGQMTANVGEHDGAIVMSGTCIAP*
Ga0055432_100394261	3300004022	Natural And Restored Wetlands	MRALFATTAALVVLAALPGNAPAAPLDGSVPMLCAVNSVVECTRRGDCERSTTEDAEVPAFVRIDVGKKLLISVDGSRTSPITTVQRNNGRLMLQGMQNERVWGAVINEQNGQMAATVGEDDGAIILNATCIAP*
Ga0062593_1032654861	3300004114	Soil	MRALGGVIIALIGFAMLPATAPAAPMDGSAPMLCALSSVVECSRKGECERSTAEDAAVPPFVRINVPQRILSSVDGARTSPITSVQRTNGYVMIQGMQNERVWGAVIEEQTGQMTATVGEHDGAIVMSGMCIAP*
Ga0062589_1010674062	3300004156	Soil	GGVIGALIGFAMLPGTAPAAPMDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP*
Ga0062595_1008461282	3300004479	Soil	MRRLIAIGILASSAVLPSAVPAAPLDGSAPMLCALSSVVECGRKGDCERSSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIMNVQRSNGQLMLQGTQNERVWGAVIDEASGRMSATAGEADGAFVLIGTCIAP*
Ga0062592_1004811652	3300004480	Soil	MRALGGMIIALIGFAMLPATAPAAPMDGSAPMLCALSSVVECSRKGECERSTAEDAAVPPFVRINVPQRILSSVDGARTSPITSVQRTNGYVMIQGMQNERVWGAVIEEQTGQMTATVGEHDGAIVMSGMCIAP*
Ga0068996_101465342	3300005218	Natural And Restored Wetlands	LLVTGALVGLGLLPSTAPAAPLDGSAPMLCALNSVVECGRRGDCERSTAEDAEVPPFVRIDVGKRLLSTPDGARTSPIASVQRTNGRLMVQGVQNERVWGAVINEQSGQMSAVVGEDVGAIVISGMCIAP*
Ga0065705_110276182	3300005294	Switchgrass Rhizosphere	VIGALIGFAMLPGTAPAAPMVIRTKGGTDRAHSMGAEPSNIPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGA
Ga0065707_100047535	3300005295	Switchgrass Rhizosphere	MLPGTAPAAPMVIRTKGGTDRAHSMGAEPSNIPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMMATVGEHDGATVMSAMCIAP*
Ga0065707_101110804	3300005295	Switchgrass Rhizosphere	MRRLIAIGILAGSAVVLPSAVPAAPLDGSAPILCALSSVVECGRKGDCERGSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMSATAVEADGAFVLIGTCIAP*
Ga0070690_1005859742	3300005330	Switchgrass Rhizosphere	MRRLIAIGILAGSAVVLPSAVPAAPLDGSAPILCALSSVVECGRKGDCERSSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIMNVQRSNGQLMLQGTQNERVWGAVIDEASGRMSATAGEADGAFVLIGTCIAP*
Ga0070690_1006450192	3300005330	Switchgrass Rhizosphere	MLPGTAPAAMDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMMATVGEHDGATVMSAMCIAP*
Ga0070670_1008343891	3300005331	Switchgrass Rhizosphere	VDEENVMRRLIAIGILAGSAVVLPSAVPAAPLDGSAPILCALSSVVECGRKGDCERGSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMSATAVEADGAFVLIGTCIAP*
Ga0070670_1010695822	3300005331	Switchgrass Rhizosphere	VIGALIGFAMLPGTAPAAPMVIRTKGGTDRAHSMGAEPSNIPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGAIVLSGMCIAP*
Ga0066388_1005597712	3300005332	Tropical Forest Soil	MRPVMVISVLVGAMLPAAILAAPMDGSAPMLCALSSVMECARLADCERSSPEDAQVPPFVRVNVPQKVLSSVDGARTSPITAVQRVNGRLMLQGIQNERAWALVINEENGRFSATVAEDDGAIILSGACIAP*
Ga0070689_1000782422	3300005340	Switchgrass Rhizosphere	MLPGTAPAAPMVIRTKGGTDRAHSMGAEPSNIPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP*
Ga0070689_1003815712	3300005340	Switchgrass Rhizosphere	MRRLIAIGILAGSAVVLPSAAPAAPLDGSAPILCALSSVVECGRKGDCERSLSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMSATAVEADGAFVLIGTCIAP*
Ga0070692_107446331	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VIGALIGFAMLPGTAPAAPMDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPTTSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGAIVMSGMCIAP*
Ga0070669_1003787682	3300005353	Switchgrass Rhizosphere	MRRLIAIGILAGSAVVLPSAAPAAPLDGSAPILCALSSVVECGRKGDCERGSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMAATAVESDGAFVLIGTCIAP*
Ga0070669_1004110082	3300005353	Switchgrass Rhizosphere	MLPGTAPAAPMDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPTTSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP*
Ga0070701_101418351	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MLPGTAPAAPMDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPTTSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEH
Ga0070705_1004951072	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRALGGVIGALIGFAMLPATALAAPMDGSTSMLCALSSVVECSRKGECERSTAEDAAVPSFVRINVPQRILSSVDGARTSPITAVQRTNGYLMIQGMQNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP*
Ga0070694_1003280842	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRALGAVIVTLIGFAMLPATAPAAPMDGSAPMLCALSSVVECSRKGECERSSAEDAGVPPFVRINVQQRVLSSVDGARTSPITAVQRTTCRLMIQGMQNERVWGAVIEEQTGQMTATVGEHDGAIVMSGMCIAP*
Ga0070694_1017538751	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MLPGTAPAAPMDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP*
Ga0070698_1003663482	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRALGGVIGALIGFAMFPATVPAAPMDGSAPMLCALSSVVACSRKGECERSTAEDAAVPPFVRVNIPQRLLSSVDGARTSPITAVQRTNGYLMIQGMQNERVWGAVIEEKTGQMTATVGEHDGATVMSAMCIAP*
Ga0073909_100228083	3300005526	Surface Soil	MTRLIAIGAVLGLGVLPSAVLAAPLDGSAPMLCAIQSVMECTRTGDCERSDGKDSGIPPFMRVNVPQRQLSSLDGARTSPIVSVQRSNGSLMLQGMQNERVWGAVIDEETGRMSATAVEAEGAFVLIGTCVVP*
Ga0073909_102813912	3300005526	Surface Soil	MRRLIAIGILLAGSAVVLPSAVPAAPLDGSAPMLCALSSVVECGRKGDCERSLSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGRLMLQGVQNERVWGAEVDEESGRMAATSVEADG
Ga0070697_1008636951	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRALGGVIGVLIGFGMLPATVPAAPMDGSAPMLCALSSVVECSRKGECERSTAEDVSVPPFVRVNVPQRILSSIDGARTSPIAAVQRTNGRLMIQGMQNERVWGAVIEEQTGQMTATVGEHDGAIVMSGTCIAP*
Ga0070697_1009913831	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLPGTAPAAPMDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPITAVQRTNGYLMIQGMQNERVWGAVIEEKTG
Ga0070696_1002783922	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VIGALIGFAMLPGTAPAAPMDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPTTSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP*
Ga0070696_1007202291	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRAQSGAIGALIGLAMLPATVPAAPMDGSAPMLCALSSVVECSRKGECERSTAEDAAVPSFVRINVPQRILSSVDGARTSPITAVQRTNGYLMIQEMQNERVRGAVIEEQTGQMTAT
Ga0070704_1001769711	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPTTSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP*
Ga0070702_1002095861	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MLPGTAPAAPIDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPTTSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP*
Ga0068859_1001617861	3300005617	Switchgrass Rhizosphere	MRALGAVIVTLIGFAMLPATAPAAPMDGSAPMLCALSSVVECSRKGECERSSAEDAGVPPFVRINVQQRVLSSVDGARTSPIASVQRTNGYLMIQGMQNERVWGAVIEEQTGQMTATVGEHDGAIVMSGMCIAP*
Ga0068864_1001662283	3300005618	Switchgrass Rhizosphere	MRRLIAIGILAGSAVVLPSAAPAAPLDGSAPILCALSSVVECGRKGDCERGSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMSATAVEADGAFVLIGTCIAP*
Ga0066905_1021812451	3300005713	Tropical Forest Soil	ILIAIVVSLAVCSAVARAAPLDGSAPMLCALTGVTECSDKGDCERSTAREAEVPPFIRINVPQKMLATVDGARTSPISNVQRTNGRLMIQGTQNERAWGAVIEEKTGQMMASVTEDDGVIVLSGACVAP*
Ga0066903_1001086812	3300005764	Tropical Forest Soil	MRTIVVISVLVGVALLPAATLAAPLDGSVPILCALSSVVECSGRGTCEESTAEAAEVPPFVRVNVAQKVLSTVDGARTSPIGSVQRDNGRLMLQGAQNDRVWGIVISEQTGRMWATVGEDDGAIVLSGACIAP*
Ga0066903_1066313911	3300005764	Tropical Forest Soil	MRPVMVISVLVGVAMVPAAILAAPMDGSAPMLCALSSVMECARLADCERSSPEDAQVPPFVRVNVPQKVLSSVDGARTSPITAVQRVNGRLMLQGIQNERAWALVINEENGRFSATVAEDDGAIILSGACIAP*
Ga0068870_104048981	3300005840	Miscanthus Rhizosphere	SSAHAVPIGPVLGGVIGALIGFAMLPGTAPAAPMVIRTKGGTDRAHSMGAEPSNIPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP*
Ga0068863_1026002381	3300005841	Switchgrass Rhizosphere	QDGRGLGGRAGPDDVHRRVRADVGVHSSAHAVPIGPVLGGVIGALIGFAMLPGTAPAAPMVIRTKGGTDRAHSMGAEPSNIPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGAIVMSGMCIAP*
Ga0066656_100857632	3300006034	Soil	MRALHVIGALIGLVILPSAVPAAPLDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPITSFQRANGRLMLQGMQNERVWGAVIDEGTGQMSATVGEDDGAIVISGACIAP*
Ga0074059_108882501	3300006578	Soil	AAPLDGAAPMLCALSSVVECGRKGDCERSLSEEAGIPAFIRVNVTQRLLSSLDGARTSPIVNVQRSNGQLMLQGMQNERVWGAAIDEESGRMSATAVEADGAFVLTGTCIAL*
Ga0075434_1001444042	3300006871	Populus Rhizosphere	MRALVMMSGIGVLASLGIAPWPAAAAPMDGSVPMLCAVNSVVECSKLGDCERVTAEDASVPPFVRINVPQRVLSSVDGTRTSPIVSIQRTNGRLMLQGAQNQRIWGAVINEETGRMSATIGEDDGAIVLSGACIAP*
Ga0075435_1005969753	3300007076	Populus Rhizosphere	MRTLPAAALVAISCLLPAAPPPSAAPLDSSTPLLCALNSVLECARRGNCERTNTDEAEIPAFVQINLPKKILSSVDGKRTSPITSVNRANGRLMIQGMQNERVWGAV
Ga0066710_1010713141	3300009012	Grasslands Soil	MRALHVIGALIGLVILPSAVPAAPLDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPITSFQRANGRLMLQGMQNERVWGAVIDEGTGQMSATVGEDDGAIVISGACIAP
Ga0099829_102747143	3300009038	Vadose Zone Soil	LDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPIASFQRANGRLMLQGMQNERVWGAVIDEGTGQMSATVGEDDGAIVISGACIAP*
Ga0105240_110953492	3300009093	Corn Rhizosphere	VDEENVMRRLIAIGILAGSAVVLPSAVPGAPLDGSAPILCALSSVVECGRKSDCERGSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMLQGTQNERVWGAVIDEASGRMSATAGEADGAFVLIGTCIAP*
Ga0105245_112151411	3300009098	Miscanthus Rhizosphere	MDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPTTSVQRTNGYLMIQGMQNERVWGAVIEEQTGLIVATVDFLM
Ga0105243_107606302	3300009148	Miscanthus Rhizosphere	MDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTAR*
Ga0105092_109348232	3300009157	Freshwater Sediment	MRRLIAIGILAGSVVLPSAVPAAPLDGSAPMLCALSSVVECGRKGDCERSLSEEAGIPAFIRVNVAQRLLSSLDGARTSPIVNVQRSNGRLMLQGMQHERVWGAVIDEESGRMSATAGEADG
Ga0105241_112804962	3300009174	Corn Rhizosphere	LPSAVPAAPLDGSAPILCALSSVVECGRKGDCERGSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMSATAVEADGAFVLIGTCIAP*
Ga0105248_103541123	3300009177	Switchgrass Rhizosphere	MDGSAPMLCALSSVVECSRKGECERSSAEDAGVPPFVRINVQQRVLSSVDGARTSPIASVQRTNGYLMIQGMQNERVWGAVIEEQTGQMTATVGE
Ga0105248_108813092	3300009177	Switchgrass Rhizosphere	MLCALSSVIECSRKGECERSTSEEASVPPFVRINIQQRILSSVDGARTSPITSVQRTNGYLMIQGMQNERVWGAVIEEKTGQMTATVGEHDGAIIMSAMCIAP*
Ga0105249_100055459	3300009553	Switchgrass Rhizosphere	VDEENVMRRLIAIGILAGSAVVLPSAVPGAPLDGSAPILCALSSVVECGRKSDCERGSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMSATAVEADGAFVLIGTCIAP*
Ga0105249_100359844	3300009553	Switchgrass Rhizosphere	MDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP*
Ga0126374_101439712	3300009792	Tropical Forest Soil	MRTLGVIAALLLLGCLPSTAPAAPLDGSAPMLCALSSVMECTRRGDCERSSAEEAGIPAFIRVIVPQKILSSLDGARTSPITAVQRSDGKLMIQGMQNARVWGAVIDEQSGQMSATAGEADGAFVLVGNCIAP*
Ga0105057_11096011	3300009813	Groundwater Sand	ALIGLGLLPLAVSAAPLDGSAPILCALTSVVECSRRGDCERSTPEDAQVPPFVRIDVGKRLLSSIDGGRTSPIVSVQRANGRLMLQGMQNERVWGAVVNEQTGQMSATAGEDDGAIVISGTCIAP*
Ga0126384_122456012	3300010046	Tropical Forest Soil	LPPSATVSSVVECSRRGECERSTPEDAQVPSFVRINVPQRVLSSIDGARTSPITSVQRTNGRVMVQGMQNERVWGAVINEESGRMSATVGEDDGAIVITGACFAP*
Ga0126376_108673832	3300010359	Tropical Forest Soil	MRTLGVVAALLLLAGLPSAAPAAPLDGSVPMLCALSSVVECSRRGDCERSSAEEAGIPPFIRVIVPQKILSSMDGARTSPITAMQRLDGKLMIQGMQNGRVWGAVIDEQSGQMSATAGEADGAFVLVGQCIAP*
Ga0126378_106165583	3300010361	Tropical Forest Soil	MRGLLVSGAAIVFGILPVAGVAAPIDGSVPMLCAANSVIECTRKGDCQRSSPEEAEVPGFIRVDLGKKILSSVDGSRTSPITANQRNNGKLMIQGMQNERVWGAVIEEQTGMMTATIGEDDGAIVIVGTCIA
Ga0126379_125098651	3300010366	Tropical Forest Soil	TLFGIGVVVFLGLGLAPASTLAAPLDGSASMLCAVNNVTDCPRSGDCERSSAEAAEVPGFVRIDVPKRLLSTVDGARTSPIATFQRNNGRLMLQGMQNERAWAVIVNEQTGQMSATIGEDDGGIIISGTCIAP*
Ga0126381_1004879562	3300010376	Tropical Forest Soil	MRTLFGIGVVVLLGLGLAPAFTFAAPMDGSAPMLCAVNNVTDCPRSGDCERSSAEAAEVPGFVRIDVAKRLLSTVDGARTSPIATFQRNNGRLMLQGMQNERAWAVIVNEQTGQMSATIGEDDGAIIIAGTCIAP*
Ga0126381_1006909273	3300010376	Tropical Forest Soil	MRGLLISGAAIVFGILLDAGVAAPMDGSVPMLCAANSVIECTRKGDCQRSSPEEAEVPGFIRVDLGKKILSSVDGSRTSPITANQRNNGKLMIQGMQNERVWGAVIEEQTGMMTATIGEDDGAIVIVGTCIAP*
Ga0134124_129023971	3300010397	Terrestrial Soil	MDGSAPMLCAVSSVVECSRKGECERSTAEDAAVPPFVRINVQQRVLSSVDGARTSPITAVQRTNGRLMIQGMQNERVWGAVIEEQTGQMMATVGEHDGAIVMSGMCIAP*
Ga0134122_105328211	3300010400	Terrestrial Soil	PMDGSAPMLCAVSSVVECSRKGECERSTAEDAAVPPFVRINVPQRVLSSVDGARTSPITAVQRANGRLMIQGMQNERVWGAVIEEQTGQMTATVGEHDGAIVMSGTCIAP*
Ga0134121_125197602	3300010401	Terrestrial Soil	MDGSAPMLCALSSVVECSRKGECERSSAEDAGVPPFVRINVQQRVLSSVDGARTSPIASVQRTNGYLMIQGMQNERVWGAVIEEQTGQMTATVGEHDGAIVMSGMCIAP*
Ga0137374_101093541	3300012204	Vadose Zone Soil	MRALHVIGALVGLVILPSAVLAAPLDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPIASFQRHNGRLMLQGMQNERVWGAVIDEGTGQM
Ga0137380_102642523	3300012206	Vadose Zone Soil	MRALHVIGALVGLVILPSAVLAAPLDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPITSFQRANGRLMLQGMQNERVWGAVIDEGTGQMSATVGEDDGAIVISGACIAP*
Ga0137381_113655391	3300012207	Vadose Zone Soil	MRALHVIGALIGLVILPSAVLAAPLDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPIASFQRTNGRLMLQGMQNERVWGAVIDEGTGQMSATVGEDDGAIVISGACIAP*
Ga0137379_114115081	3300012209	Vadose Zone Soil	IGALVGLVILPSAVPAAPLDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPITSFQRANGRLMLQGMQNERVWGAVIDEGTGQMSATVGEDDGAIVISGACIAP*
Ga0137372_101565083	3300012350	Vadose Zone Soil	MRALHVIGALVGLVILPSAVLAAPLDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPIASFQRTNGRLMLQGMQNERVWGAVIDEGTGQMSATVGEDDGAIVISGACIAP*
Ga0137367_100723742	3300012353	Vadose Zone Soil	MRALHVIGALVGLVILPSAVLAAPLDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPIASFQRHNGRLMLQGMQNERVWGAVIDEGTGQMSATVGEDDGAIVISGACIAP*
Ga0137366_100691142	3300012354	Vadose Zone Soil	MRALHVIGALIGLVILPSAVPAAPLDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPIASFQRTNGRLMLQGMQNERVWGAVIDEGTGQMSATVGEDDGAIVISGACIAP*
Ga0137384_109109382	3300012357	Vadose Zone Soil	MRALHVIGALIGLVILHSAVPAAPLDGAAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPITSFQRANGRLMLQGMQNERVWGAVIDEGTGQMSATVGEDDGAIVISGARIAP*
Ga0137385_105185231	3300012359	Vadose Zone Soil	SMRALHVIGALIGLVILPSAVPAAPLDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPITSFQRANGRLMLQGMQNERVWGAVIDEGTGQMSATVGEDDGAIVISGACIAP*
Ga0137375_103996663	3300012360	Vadose Zone Soil	MRALHVIGALVGLVILPSAVLAAPLDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPIASFQRHNGRLMLQGMQNERVWGAVIDEGTGQMSATVGEDDGAIVISG
Ga0137360_102831782	3300012361	Vadose Zone Soil	MRALHVIGALIGLVILPSAVPAAPLDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPIASFQRANGRLMLQGMQNERVWGAVIDEGTGQMSATVGEDDGAIVISGACIAP*
Ga0137394_113393441	3300012922	Vadose Zone Soil	MRALSGVIGALIGLAMLPATVPAAPMDGSTPMLCALSSVVECSRKGECERSTAEDAAVPPFVRINVPRRILSSVDGARTSPITAVQRTNGRLMIQGMQNERVWGAVIEEQTGQMTATVGEHDGAIVMSGMCIAP*
Ga0137407_113731672	3300012930	Vadose Zone Soil	MRAFLATCSFGILLCIAMLPAAGLAAPLDGSAPMLCAVSSVVECSRRGDCERSTAEDAQVPPFVRINVQQRVLSSVDGSRTSPIATVQRTNGRLMLQGMQNERVWGAVINEETGQMSATIGEDDGAIVLSGACIAP*
Ga0164302_106304292	3300012961	Soil	MRRLIAIGILLAGSAVVLPSAVPAAPLDGSATMLCALSSVVECGRKGDCERGSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIMNVQRSNGQLMLQGMQNERVWGAVIDEESGRMSATAVEADGAFVLIGTCIAP*
Ga0134076_101400981	3300012976	Grasslands Soil	RSMRALHVIGALIGLVILPSAVPAAPLDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPITSFQRANGRLMLQGMQNERVWGAVIDEGTGQMSATVGEDDGAIVISGACIAP*
Ga0163162_102948363	3300013306	Switchgrass Rhizosphere	MDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPITSVQRTNGYLMIQGMQNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP*
Ga0157375_111965501	3300013308	Miscanthus Rhizosphere	APAAPMDGSAPMLCALSSVVECSRKSECERSTAEDAAVPPFVRINVQQRVLSSVDGARTSPITAVQRANGYVMIQGMQNERAWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP*
Ga0134075_104453251	3300014154	Grasslands Soil	MRALHVIGALIGLVILPSAVPAAPLDGSAPMLCALTSVVECPRSGNCERSTTEEAAVPPFVRINVQQRLLSSVDGGRTSPITSFQRANGRLMLQGMQNERVWGAVIDEG
Ga0075301_11375441	3300014262	Natural And Restored Wetlands	MRARFATTAALVGLAALPGNAPAAPLDGSVPMLCAVTSVVECTRRGDCERSTTEDAEVPAFVRIDVGKKLLISVDGSRTSPITTVQRNNGRLMLQGMQNERVWGAVINEQNGQMAATVGEDDGAIILNATCIAP*
Ga0075302_12101901	3300014269	Natural And Restored Wetlands	VMAAPMDGSAPMLCALNAVMECSRRGDCERTTAEDAGLPPFVRFNVQQRLLSSVDGARTSPIAAVQRSNGRLMLQGMQNERLWGAVIDEETGRMSATVGEDDGAFAVSGACIAP*
Ga0157380_101826473	3300014326	Switchgrass Rhizosphere	MDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDSATVMSAMCIAP*
Ga0157379_102447163	3300014968	Switchgrass Rhizosphere	VDEENVMRRLIAIGILAGSAVVLPSAVPGAPLDGSAPILCALSSVVECGRKGDCERGSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMSATAVEADGAFVLIGTCIAP*
Ga0157379_118113551	3300014968	Switchgrass Rhizosphere	MLCALSSVVECSRKGECERSSAEDAAVPPFVRINVPQRVLSSVDGARTSPIASVQRTNGYLMIQGMQNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP*
Ga0173478_101280762	3300015201	Soil	VDEENVMRRLIAIGILAGSAVVLPSAVPAAPLDGSAPILCALSSVVECGRKGGCERGSSEETGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMSATAVEADGAFVLIGTCIAP*
Ga0132258_104197643	3300015371	Arabidopsis Rhizosphere	MMTNRLIAFGWAAGLGLLPSTVLGAPLDGSAPMLCALSSVMECTRKADCERTSAEEAGIPPFIRVNVPQRQLSTIDGARTSPIVNVQRANGNLMLHGMQNERAWVAVIEEETGRMSATAAEPEGAFVLIGTCIAP*
Ga0132257_1013524972	3300015373	Arabidopsis Rhizosphere	MMTNRLIAFGWAAGLGLLPSTVLGAPLDGSAPMLCALSSVMECTRKADCERTSAEEAGIPPFIRVNVPQRQLSTIDGARTSPIVNVQRANGNLMLHGMQNERAWVAVIEEETGRMS
Ga0187779_109319501	3300017959	Tropical Peatland	MRTLVVSGTLIGLGLLPWTALAAPLDGSVPVLCAASSVVECTHKGECTRSTGENAGVPPLVRVDVGKRMLSSVDGVRTSPIAAVQRTNGRLMIQGMQSERVWAAVIEEQTGLITATLGEDDRAI
Ga0187777_108889002	3300017974	Tropical Peatland	VVECSHKGECTRSTGENAGVLPLVRVDVGKRMLSSVDGVRTSPIAAVQRTNGRLMIQGMQSERVWAAVIEEQTGLITATLGEDDGAIVISGTCIVP
Ga0187766_100119804	3300018058	Tropical Peatland	MRTLLVSGTLIGLGLLPWTALAAPLDGSVPVLCAASSVVECTHKGECARSTADDASVPQFVRVDVGKRMLSSVDGARTSPISAVQRTNGRLMIQGMQNERVWGAVIEEQTGMMTATIGEDDGAIVISGTCIVP
Ga0187765_100053243	3300018060	Tropical Peatland	VDCRLTALGAPLDGSVPALCAASSVVECTHKGECTRSTGENAGVPPLVRVDVGKRMLSSVDGVRTSPIAAVQRTNGRLMIQGMQSERVWAAVIEEQTGLITATLGEDDGAIVISGTCIVP
Ga0187765_101610281	3300018060	Tropical Peatland	MRTLVVSGTLVGLGLLPWTVLAAPLDGSVPVLCAASSVVECTHKGECARSTADDASVPQFVRVDVGKRMLSSVDGARTSPISAVQRTNGRLMIQGMQNERVWGAVIEEQTGMMTATIGEDDGAIVISGTCIVP
Ga0187765_104412562	3300018060	Tropical Peatland	MRRLVMAGVLVGLGVTPVMALGAPLDGSTPMLCAPSSVVECSRKGECQRSTPEDADVPPFVKVDLGQRQLTSLDGARTSPISASQRNDGRLMLQGMQNTRVWGAVIDEQTG
Ga0126371_111484092	3300021560	Tropical Forest Soil	MRTVFGIGVVILLGLGLAPAFTFAAPMDGSAPILCAVNNVTDCPRSGDCERSSAEAAEVPGFVRIDVAKRLLSTVDGARTSPIATFQRNNGRLMLQGMQNERAWAVIVNEQTGQMSATIGEDDGAIIIAGTCIAP
Ga0210073_10919401	3300025569	Natural And Restored Wetlands	MRARFVIVVIGISTSLGLLPLAVMAAPMDGSAPMLCALNAVMECSRRGDCERTTAEDAGLPPFVRFNVQQRLLSSVDGARTSPIAAVQRSNGRLMLQGMQNERLWGAVIDEETGRMSATVGEDDGAFAVSGACIAP
Ga0207681_102652363	3300025923	Switchgrass Rhizosphere	MRRLIAIGILAGSAVVLPSAVPAAPLDGSAPILCALSSVVECGRKGDCERGSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMSATAVEADGAFVLIGTCIAP
Ga0207681_105352312	3300025923	Switchgrass Rhizosphere	MRALGAVIVTLIGFAMLPATAPAAPMDGSAPMLCALSSVVECSRKGECERSSAEDAAVPPFVRINVQQRVLSSVDGARTSPTTSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP
Ga0207701_110268041	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLIAIGILAGSAVVLPSAVPAAPLDGSAPILCALSSVVECGRKSDCERGSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMAATAVESDGAFVLIGTCIAP
Ga0207701_110587851	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRTIVVISVLLGGLMVPAAAPAAPMDGSVPMLCALSSVVECSRLGDCERQAAEAAEVPPFVRVDVPQRVLGSIDGARTSPIAAVQRANGRLMLQGTQNSRVWGVVINEETGRMSATVGEDDGALVLTGACIAL
Ga0207709_113690292	3300025935	Miscanthus Rhizosphere	PAAPLDGSAPILCALSSVVECGRKDGCERGSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMAATAVESDGAFVLIGTCIAP
Ga0207711_106293612	3300025941	Switchgrass Rhizosphere	VIGALIGFAMLPGTAPAAPMVIRTKGGTDRAHSMGAEPSNIPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGAIVMSGMCIAP
Ga0207689_105026462	3300025942	Miscanthus Rhizosphere	MLPGTAPAAPMDGSAPMLCALSSVVECSRKGECERSSAEDAGVPPFVRINVPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP
Ga0207651_113202091	3300025960	Switchgrass Rhizosphere	FAMLPATAPAAPMDGSAPMLCALSSVVECSRKGECERSSAEDAGVPPFVRINVQQRVLSSVDGARTSPIASVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGAIVMSGMCIA
Ga0207712_100323803	3300025961	Switchgrass Rhizosphere	MLPGTAPAAPMDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPTTSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP
Ga0207712_100844413	3300025961	Switchgrass Rhizosphere	MRRLIAIGILASSAVLPSAVPAAPLDGSAPMLCALSSVVECGRKGDCERSSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIMNVQRSNGQLMLQGTQNERVWGAVIDEASGRMSATAGEADGAFVLIGTCIAP
Ga0207712_102248532	3300025961	Switchgrass Rhizosphere	MRRLIAIGILAGSAVVLPSAVPGAPLDGSAPILCALSSVVECGRKSDCERGSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMSATAVEADGAFVLIGTCIAP
Ga0208418_10392621	3300026018	Natural And Restored Wetlands	VMAAPMDGSAPMLCALNAVMECSRRGDCERTTAEDAGLPPFVRFNVQQRLLSSVDGARTSPIAAVQRSNGRLMLQGMQNERLWGAVIDEETGRMSATVGEDDGAFAVSGACIAP
Ga0207703_101207262	3300026035	Switchgrass Rhizosphere	MLPGTAPAAPMDGSAPMLCALSVPPFVRINVPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP
Ga0207674_100920403	3300026116	Corn Rhizosphere	MRRLIAIGILAGSAVVLPSAVPGAPLDGSAPILCALSSVVECGRKGDCERGSSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMFQGMQNERVWGAVIDEESGRMSATAVEADGAFVLIGTCIAP
Ga0268265_110658222	3300028380	Switchgrass Rhizosphere	MRALGGVIIALIGFAMLPATAPAAPMDGSAPMLCALSSVVECSRKGECERSTAEDAAVPPFVRINVPQRILSSVDGARTSPITSVQRTNGYVMIQGMQNERVWGAVIEEQTGQMTATVGEHDGAIVMSG
Ga0268264_100777791	3300028381	Switchgrass Rhizosphere	ALGGVIGALIGFAMLPGTAPAAPMVIRTKGGTDRAHSMGAGPSNIPQRILSSVDGARTSPITSVQRTNGYLMIRGMHNERVWGAVIEEQTGQMTATVGEHDGATVMSAMCIAP
Ga0307469_123865981	3300031720	Hardwood Forest Soil	MRTVVVISVLIGVAMVPAAILAAPMDGSAPMLCALSSVTECSRQGDCERVLPEVAEVPTFVRVNVPQKVLSTIDGSRTSPITTVERANGRLMLQGMQNNRVWGLVINEESGRFSATMGEDDGALLLSGACIAP
Ga0307470_106794031	3300032174	Hardwood Forest Soil	MRRLIAMGILAGSAVLPSAVPAAPLDGSAPILCALSSVVECGRKGDCERSNPDEVGIPAFIRVNVPQRLLTSLDGARTSPLVNVQRSNGQLMLQGMQHERVWGAVIDEESGRMSATAGEADGAFVLIGTCIVP
Ga0307470_110287781	3300032174	Hardwood Forest Soil	MRRLIAIGILAGSAVVLPSAVPAAPLDGSAPMICALSSVVECGRKGDCERSLSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMLQGMQNERVWGAAIDEESGRMSATAVEADGAFVLIGTCMAP
Ga0307471_1005536003	3300032180	Hardwood Forest Soil	MMRALLVTGALAGLVVLPRVAPAAPIDGSVPMLCAVNSVVECTRRGSCERSTAEDAEVPAFVRIDVAKRLLSTVDGARTSPIASVQRTNGRLMLQGMQNERVWGAVVNEQSGQMSATIGEDDGAIVLSASCIAQ
Ga0307471_1018065122	3300032180	Hardwood Forest Soil	MRRLIAIGILAGSAILPSAVAAAPLDGSAPMLCALSSVVECGRKGDCERSSADEAGIPPFIRVNVPQRMLSSLDGARTSPIVNVQRSNGQLMIQGMQHERVWGAVIDEESGRMSATAGEADGAFVLIGTCIAP
Ga0307471_1036619871	3300032180	Hardwood Forest Soil	MRRLIAIGILAGSAVVLPSAVPAAPLDGSAPMICALSSVVECGRKGDCERSLSEEAGIPAFIRVNVPQRLLSSLDGARTSPIVNVQRSNGQLMLQGMQNERVWGAAIDEESGRMSATAGEADGAFVLIGTCIAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067711

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences