NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F067788

Metagenome / Metatranscriptome Family F067788

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F067788
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 90 residues
Representative Sequence MQTVLILMLVSTILPVSIANAAFLEDYSETPTKKSLNTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNTTRITILH
Number of Associated Samples 92
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.60 %
% of genes near scaffold ends (potentially truncated) 28.80 %
% of genes from short scaffolds (< 2000 bps) 94.40 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (80.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(24.800 % of family members)
Environment Ontology (ENVO) Unclassified
(24.800 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(41.600 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 35.11%    β-sheet: 9.57%    Coil/Unstructured: 55.32%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF00072Response_reg 4.00
PF06348DUF1059 3.20
PF07452CHRD 2.40
PF127294HB_MCP_1 0.80
PF01638HxlR 0.80
PF00582Usp 0.80
PF01904DUF72 0.80
PF02735Ku 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG1273Non-homologous end joining protein Ku, dsDNA break repairReplication, recombination and repair [L] 0.80
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.80
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 0.80


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A80.00 %
All OrganismsrootAll Organisms20.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001213|JGIcombinedJ13530_106126813Not Available664Open in IMG/M
3300004006|Ga0055453_10024608All Organisms → cellular organisms → Archaea1509Open in IMG/M
3300004114|Ga0062593_101109505Not Available822Open in IMG/M
3300004156|Ga0062589_100307484Not Available1230Open in IMG/M
3300004157|Ga0062590_102427731Not Available554Open in IMG/M
3300004463|Ga0063356_101225197All Organisms → cellular organisms → Archaea1092Open in IMG/M
3300004463|Ga0063356_103380232Not Available687Open in IMG/M
3300004479|Ga0062595_100364785All Organisms → cellular organisms → Archaea1014Open in IMG/M
3300004643|Ga0062591_101203193All Organisms → cellular organisms → Archaea738Open in IMG/M
3300005045|Ga0071328_162439Not Available2551Open in IMG/M
3300005045|Ga0071328_171087All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium5394Open in IMG/M
3300005093|Ga0062594_100057485All Organisms → cellular organisms → Archaea2044Open in IMG/M
3300005093|Ga0062594_101270196Not Available736Open in IMG/M
3300005093|Ga0062594_102933940Not Available532Open in IMG/M
3300005290|Ga0065712_10217114Not Available1053Open in IMG/M
3300005329|Ga0070683_100897429Not Available850Open in IMG/M
3300005345|Ga0070692_11284451Not Available524Open in IMG/M
3300005441|Ga0070700_100365811Not Available1074Open in IMG/M
3300005444|Ga0070694_100435973Not Available1032Open in IMG/M
3300005535|Ga0070684_101689352Not Available597Open in IMG/M
3300005535|Ga0070684_101887817Not Available564Open in IMG/M
3300005536|Ga0070697_100235409Not Available1563Open in IMG/M
3300005614|Ga0068856_100453227All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon1304Open in IMG/M
3300005615|Ga0070702_100769753Not Available741Open in IMG/M
3300005616|Ga0068852_101267116Not Available759Open in IMG/M
3300005618|Ga0068864_101207281All Organisms → cellular organisms → Archaea755Open in IMG/M
3300005718|Ga0068866_10411564Not Available875Open in IMG/M
3300005840|Ga0068870_11148504All Organisms → cellular organisms → Archaea560Open in IMG/M
3300005888|Ga0075289_1086702All Organisms → cellular organisms → Archaea522Open in IMG/M
3300006358|Ga0068871_101375703Not Available665Open in IMG/M
3300009156|Ga0111538_12901905Not Available600Open in IMG/M
3300009162|Ga0075423_12929377Not Available523Open in IMG/M
3300009176|Ga0105242_10221267All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon1692Open in IMG/M
3300009176|Ga0105242_10337058Not Available1389Open in IMG/M
3300009176|Ga0105242_11829306Not Available646Open in IMG/M
3300010371|Ga0134125_10416399Not Available1490Open in IMG/M
3300010373|Ga0134128_10369568Not Available1602Open in IMG/M
3300010375|Ga0105239_11525715Not Available772Open in IMG/M
3300010375|Ga0105239_11819490Not Available706Open in IMG/M
3300010397|Ga0134124_11871831Not Available635Open in IMG/M
3300010399|Ga0134127_11160988Not Available838Open in IMG/M
3300010403|Ga0134123_10844526All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300011119|Ga0105246_10161896Not Available1705Open in IMG/M
3300012204|Ga0137374_11225749Not Available523Open in IMG/M
3300012495|Ga0157323_1029568Not Available574Open in IMG/M
3300012527|Ga0136633_1254223Not Available644Open in IMG/M
3300012684|Ga0136614_10547036Not Available830Open in IMG/M
3300012915|Ga0157302_10246306Not Available667Open in IMG/M
3300012941|Ga0162652_100020135Not Available925Open in IMG/M
3300012941|Ga0162652_100097029Not Available525Open in IMG/M
3300012951|Ga0164300_10031474All Organisms → cellular organisms → Archaea1951Open in IMG/M
3300012951|Ga0164300_10178945Not Available1020Open in IMG/M
3300012951|Ga0164300_10317446Not Available822Open in IMG/M
3300012955|Ga0164298_10332406All Organisms → cellular organisms → Archaea955Open in IMG/M
3300012957|Ga0164303_10221179Not Available1064Open in IMG/M
3300012957|Ga0164303_10767930Not Available659Open in IMG/M
3300012958|Ga0164299_10080450All Organisms → cellular organisms → Archaea1633Open in IMG/M
3300012958|Ga0164299_10353871Not Available925Open in IMG/M
3300012960|Ga0164301_11057873Not Available642Open in IMG/M
3300012961|Ga0164302_10224264Not Available1175Open in IMG/M
3300012961|Ga0164302_10245731Not Available1133Open in IMG/M
3300012961|Ga0164302_10388700Not Available947Open in IMG/M
3300012984|Ga0164309_11688545Not Available543Open in IMG/M
3300012986|Ga0164304_10430663Not Available945Open in IMG/M
3300012986|Ga0164304_11211263Not Available610Open in IMG/M
3300012987|Ga0164307_11540351Not Available562Open in IMG/M
3300012989|Ga0164305_10497967Not Available958Open in IMG/M
3300012989|Ga0164305_11046126Not Available697Open in IMG/M
3300013096|Ga0157307_1178344Not Available513Open in IMG/M
3300013297|Ga0157378_10059082All Organisms → cellular organisms → Archaea3420Open in IMG/M
3300013297|Ga0157378_10115353All Organisms → cellular organisms → Archaea2468Open in IMG/M
3300013297|Ga0157378_10730656Not Available1011Open in IMG/M
3300013308|Ga0157375_12944026Not Available569Open in IMG/M
3300014325|Ga0163163_11250285Not Available805Open in IMG/M
3300015077|Ga0173483_10729811Not Available563Open in IMG/M
3300015371|Ga0132258_10181418All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus hydrocola5087Open in IMG/M
3300015371|Ga0132258_10437568Not Available3257Open in IMG/M
3300015371|Ga0132258_11624647Not Available1631Open in IMG/M
3300015371|Ga0132258_13057001All Organisms → cellular organisms → Archaea1158Open in IMG/M
3300015372|Ga0132256_100388622Not Available1496Open in IMG/M
3300015372|Ga0132256_101271932Not Available849Open in IMG/M
3300015372|Ga0132256_101903093Not Available702Open in IMG/M
3300015373|Ga0132257_100837107Not Available1150Open in IMG/M
3300015373|Ga0132257_100977708All Organisms → cellular organisms → Archaea1064Open in IMG/M
3300015374|Ga0132255_102716902Not Available757Open in IMG/M
3300015374|Ga0132255_105423296Not Available540Open in IMG/M
3300015374|Ga0132255_105993271Not Available514Open in IMG/M
3300018027|Ga0184605_10158244All Organisms → cellular organisms → Archaea1021Open in IMG/M
3300018028|Ga0184608_10037233All Organisms → cellular organisms → Archaea1861Open in IMG/M
3300018028|Ga0184608_10227708Not Available819Open in IMG/M
3300018028|Ga0184608_10452947Not Available552Open in IMG/M
3300018061|Ga0184619_10286425All Organisms → cellular organisms → Archaea756Open in IMG/M
3300018061|Ga0184619_10303229Not Available732Open in IMG/M
3300018076|Ga0184609_10141310Not Available1104Open in IMG/M
3300018076|Ga0184609_10549679Not Available521Open in IMG/M
3300019867|Ga0193704_1080461Not Available598Open in IMG/M
3300019868|Ga0193720_1013651Not Available1135Open in IMG/M
3300019869|Ga0193705_1089324Not Available581Open in IMG/M
3300019873|Ga0193700_1044570Not Available710Open in IMG/M
3300019879|Ga0193723_1061501Not Available1093Open in IMG/M
3300020018|Ga0193721_1079435Not Available851Open in IMG/M
3300021078|Ga0210381_10184093Not Available723Open in IMG/M
3300025556|Ga0210120_1020565All Organisms → cellular organisms → Archaea1286Open in IMG/M
3300025899|Ga0207642_10510462Not Available737Open in IMG/M
3300025901|Ga0207688_11061804Not Available511Open in IMG/M
3300025932|Ga0207690_11118776Not Available657Open in IMG/M
3300025934|Ga0207686_10135657Not Available1694Open in IMG/M
3300025938|Ga0207704_10230439Not Available1377Open in IMG/M
3300026023|Ga0207677_11645811Not Available595Open in IMG/M
3300026089|Ga0207648_11437122Not Available648Open in IMG/M
3300026142|Ga0207698_10380768All Organisms → cellular organisms → Archaea1342Open in IMG/M
3300030902|Ga0308202_1141913Not Available528Open in IMG/M
3300031091|Ga0308201_10299930Not Available572Open in IMG/M
3300031092|Ga0308204_10280600Not Available551Open in IMG/M
3300031114|Ga0308187_10482243Not Available507Open in IMG/M
3300031562|Ga0310886_10173945Not Available1154Open in IMG/M
3300031858|Ga0310892_10889193Not Available623Open in IMG/M
3300031892|Ga0310893_10467244Not Available562Open in IMG/M
3300031908|Ga0310900_10484549Not Available958Open in IMG/M
3300031908|Ga0310900_10545151Not Available909Open in IMG/M
3300032075|Ga0310890_11791833Not Available510Open in IMG/M
3300032122|Ga0310895_10088647Not Available1235Open in IMG/M
3300032122|Ga0310895_10403822Not Available670Open in IMG/M
3300032179|Ga0310889_10403057Not Available679Open in IMG/M
3300032211|Ga0310896_10187552Not Available1009Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil24.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil8.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere7.20%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil6.40%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.80%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.20%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.40%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.40%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere2.40%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand1.60%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.60%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.60%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil1.60%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.60%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.60%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.60%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.80%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.80%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.80%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.80%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.80%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300004006Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005045Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USAEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005888Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012495Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610Host-AssociatedOpen in IMG/M
3300012527Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)EnvironmentalOpen in IMG/M
3300012684Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012941Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300019867Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1EnvironmentalOpen in IMG/M
3300019868Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1EnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300019873Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300025556Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ13530_10612681313300001213WetlandMHTILILMLISTLLPVSVANAAFLEDYADTPTKKSLNTILDFCKSSPDGSIATDLVNTSKISDFYAEYTCEDAAQEKAWLDGNQSNTTRITILH*
Ga0055453_1002460833300004006Natural And Restored WetlandsMHTVLILMLISTILPVSVANAAFLEDYSDTPTKKSLNTILDYCNSNPDGNIRTDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNATRITILH*
Ga0062593_10110950523300004114SoilMQTVLILMLVSTILPVSIANAAFLEDYSETPTKKSLDTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEK
Ga0062589_10030748413300004156SoilMQTVLILMLVSTILPVSIANAAFLEDYSETPTKKSLDTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNATRITILH*
Ga0062590_10242773113300004157SoilMQTVLILMLTATILPVSIANAAFLEDYADTPTKKSLNTILDFCKSNPDGSIATELVNTSKISEFYAEYTCDDAAQEKSWLDGNQSNTTRITILH*
Ga0063356_10122519713300004463Arabidopsis Thaliana RhizosphereMHTVLILMLILTILPVSIANAAFLEDYADTPTKKSLNTILDYCQSNPDGSIATDLVNTSKISDFYAGYTCDDAAKEKSWLDGNQSNTTRITILH*
Ga0063356_10338023213300004463Arabidopsis Thaliana RhizosphereMHIVLILMLISTILPVSFAYASFLEDYASTPTKKSLNTILDYCKSNPDGNIATDLVNTSKISDFYAGYTCDDAAQERSWLDGNQSNTTKITILH*
Ga0062595_10036478513300004479SoilEDYSETPTKKSVNTILDFCKSNPDGSIATDLVNTSKISDFYAGYTCDDAAQEKSWLDGNQSNTTRITILH*
Ga0062591_10120319323300004643SoilMYAVLILMLISTVLPASIANAAFLEDYAHTPTKKSLNIILDYCAANPDGSIATDLVNTSKISDFYAEYTCEDAAQEKAWLEGNQSNTARITILH*
Ga0071328_16243923300005045PermafrostMHTVLILMLILTILPVSIANAAFLEDYAHTPTKKSLNTILDFCKSNPGGNIATDLVNTSKISDFYAEYTCDDAAQEKSWLDGNQSNTTRITILH*
Ga0071328_17108723300005045PermafrostVHTLLTLLLVSTIFPVSTVSAAFLEDYSHTPTKKSLNTILDFCQSNPDGNIAIDLVNTSKISDFYADYTCEKAAQDKAWLDGNQSSSNTTITILH*
Ga0062594_10005748513300005093SoilMHTVFILMLISTILPVSIANAAFLEDYAHTPTKKSLNTILDYCQSNPGGSIATDLVNTSKISDFYADYTCDKAAEDKAWLEGNQPNTTTITILH*
Ga0062594_10127019613300005093SoilMHTVLILMLISTILPLGIANAAFLEDYSETPTKKSLNTILDFCKSNPDGSIATDLVNTSKISDFYAGYTCDDAAQEKSWLDGNQSNTTRITIL
Ga0062594_10293394013300005093SoilMTILPVSIAHAAFLEDYSDSPTKKSLNTILDYCQSNPDGNIARDLVNTSKISDFYADYTCDDAAQEKSWLDGNQTNTTRITMLH*
Ga0065712_1021711413300005290Miscanthus RhizosphereMQTVLVLMLVSTILPVSIANAAFLEDYSETPTKKSLNTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNATRITILH*
Ga0070683_10089742913300005329Corn RhizosphereMHVVLILMLISTASPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH*
Ga0070692_1128445113300005345Corn, Switchgrass And Miscanthus RhizosphereMHAVLILMLLSTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH*
Ga0070700_10036581113300005441Corn, Switchgrass And Miscanthus RhizosphereNAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNSSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH*
Ga0070694_10043597323300005444Corn, Switchgrass And Miscanthus RhizosphereLPVSIANAAFLEDYSETPTKKSLDTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNATRITILH*
Ga0070684_10168935213300005535Corn RhizosphereSNVLPASVANAAFLEDYAHTPTKKSLNIILDYCAANPDASIATDLVNTSKISDFYAEYTCEDAAQEKAWLEGNQSNTARITILH*
Ga0070684_10188781713300005535Corn RhizosphereMHVVLILMLISTASPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITIL
Ga0070697_10023540923300005536Corn, Switchgrass And Miscanthus RhizosphereMQTVLVLMLVSTILPVSIANAAFLEDYSETPTKKSLNTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAEEKSWLDGNQSNTTRITILH*
Ga0068856_10045322723300005614Corn RhizosphereMHALLILMLISTVLPESISNAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH*
Ga0070702_10076975313300005615Corn, Switchgrass And Miscanthus RhizosphereMHVVLILMLISTASPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLDGN
Ga0068852_10126711613300005616Corn RhizosphereMHAVLILMLLSTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWL
Ga0068864_10120728113300005618Switchgrass RhizosphereMHTVLILTLIMTILPVSIANAALLEDYSDTPTKKSLNTILDYCQSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQTNTTRITMLH*
Ga0068866_1041156413300005718Miscanthus RhizosphereMHAVLILMLLSTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNSSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH*
Ga0068870_1114850423300005840Miscanthus RhizosphereIAHAAFLEDYSDSPTKKSLNTILDYCQSNPDGNIARDLVNTSKISDFYADYTCDDAAQEKSWLDGNQTNTTRITMLH*
Ga0075289_108670213300005888Rice Paddy SoilMLISTLLPVSVANAAFLEDYADTPTKKSLNTILDFCKSSPDGSIATDLVNTSKISDFYAEYTCEDAAQEKAWLDGNQSNTTRITILH*
Ga0068871_10137570313300006358Miscanthus RhizosphereMHAVLILMLISTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNSSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH*
Ga0111538_1290190513300009156Populus RhizosphereMYAVLILMLISTVLPVSIANAAFLEDYSDTPTKKSLNTILDYCQSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQTNTTRITMLH*
Ga0075423_1292937713300009162Populus RhizosphereMLVSTILPVSIANAAFLEDYSETPTKKALSTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNATRIT
Ga0105242_1022126723300009176Miscanthus RhizosphereMLISTVLLESISNAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNSSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH*
Ga0105242_1033705823300009176Miscanthus RhizosphereTILPVSIANAAFLEDYAHTPTKKSLNTILDYCQSNPGGSIATDLVNTSKISDFYADYTCDKAAEDKAWLEGNQSNTTTITILH*
Ga0105242_1182930613300009176Miscanthus RhizosphereMQTVIILMLASTILPVSIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNATRITILH*
Ga0134125_1041639923300010371Terrestrial SoilMHTVLILVLISTILPLGIANAAFLEDYSETPTKKSLNTILDFCKSNPDGSIATDLVITSKISDFYEGYACDDAAQEKSWLDGNQSNTTRITILH*
Ga0134128_1036956823300010373Terrestrial SoilMLASTILPVSIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNTTRITILH*
Ga0105239_1152571513300010375Corn RhizosphereMHTVLILMLISTILPVSIANAAFLEDYAHTPTKKSLNTILDYCQSNPGGSIATDLVNTSKISDFYADYTCDKAAGDKAWLEGNQSNTTTITILH*
Ga0105239_1181949013300010375Corn RhizosphereMLISTILPLGIANAAFLEDYSETPTKKSLNTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNATRITILH*
Ga0134124_1187183113300010397Terrestrial SoilMTILPVSIANAAFLEDYSDTPTKKSLNTILDYCQSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQTNTTRITMLH*
Ga0134127_1116098813300010399Terrestrial SoilMQTVLILMLVSTILPVSIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNATRITILH*
Ga0134123_1084452613300010403Terrestrial SoilMLISTILPVSIANAAFLEDYAHTPTKKSLNTILDYCQSNPGGSIATDLVNTSKISDFYADYTCDKAAEDKAWLEGNRSNTTTIT
Ga0105246_1016189623300011119Miscanthus RhizosphereMLISTASPVSIANAAFLEDYAHTPTKKSLNTILDLCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH*
Ga0137374_1122574913300012204Vadose Zone SoilVGLEMYGTSSPRKEKVVSELGAYLMVISTILPVSIANAAFLEDYSEIPTKKSLNAILDYCQSNPDGNIATDLVNTWKISEFYAEYTCDDAAQENSWLEGNQSNTTTITILH*
Ga0157323_102956813300012495Arabidopsis RhizosphereMHAVLILMLISTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLEGNQSNTTRITILH*
Ga0136633_125422313300012527Polar Desert SandMHPFLMLMLISTIFPVSTVSAAFLEDYAHTPTKKSLNAILDYCQSNPDGNIASDLVNTSKISDFYAEYSCDDAAQEKSWLEGDQSNTTTITILH*
Ga0136614_1054703613300012684Polar Desert SandMHPFLMLMLISTIFPVSTVSAAFLEDYSHTPTKKSLNTILDFCQSNPDGNIAIDLVNTSKISDFYADYTCDKAAQDKAWLDGNQSNSTRITILH*
Ga0157302_1024630613300012915SoilMLALTILPVSIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNTTRITILH*
Ga0162652_10002013523300012941SoilMLISTILPLGIANAAFLEDYSETPTKKSLNTILDFCKSNPDGSIATDLVNTSKISDFYAGYTCDDAAQEKSWLDGNQSNTTRITILH*
Ga0162652_10009702913300012941SoilMRTVLILMLISTVLPISIANAAFLEDYAHTPTKKSLNTILDYCQSNPGGSIVTDLVNTSKISDFYADYTCDKAAEDKAWLEGNQSNTTRIT
Ga0164300_1003147433300012951SoilMHAVLILILISTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLEGNQSNTTRITILH*
Ga0164300_1017894513300012951SoilAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYTDYTCDDAAQEKSWLDGNQSNTTRITILH*
Ga0164300_1031744613300012951SoilMYAVLILMLISNVLPASVANAAFLEDYAHTPTKKSLNIILDYCAANPDASIATDLVNTSKISDFYAEYTCEDAAQKKAWLEGNQSN
Ga0164298_1033240623300012955SoilMTILPVSIANAAFLEDYSDTPTKKSLNTILDYCQSNPDGNIVTDLVNTSKISDFYADYTCDDAAQEKSWLDGNQTNTTRITMLH*
Ga0164303_1022117913300012957SoilMLALTILPVSIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYTDYTCDDAAQEKSWLDGNQSNTTRITILH*
Ga0164303_1076793013300012957SoilMLISTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNSSKISDFYAGYTCDEAVQEKSWLEGNQSNTTRITILH*
Ga0164299_1008045013300012958SoilLISTVLPASIANAAFLEDYAHTPTKKSLNIILDYCAANPDGSIATDLVNTSKISDFYAEYTCEDAAQEKAWLEGNQSNTARITILH*
Ga0164299_1035387113300012958SoilMQTVLILMLALTILPVSIANAAFLEDYSETPTKKSLNTILEFCRSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNTTRITILH*
Ga0164301_1105787313300012960SoilMQTVLILMLVSTILPVSIANAAFLEDYSETPTKKSLNTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNTTRITILH*
Ga0164302_1022426423300012961SoilMLALTILPVSIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNATRITILH*
Ga0164302_1024573123300012961SoilMHTVLILILISTILPVGIANAAFLEDYADTPTKKSLNTILDFCASKPDGNIATDLVNTSKISDFYAEYTCEDAAQEKAWLEGNQSNTARITILH*
Ga0164302_1038870013300012961SoilMHALLILILISTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNSSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH*
Ga0164309_1168854513300012984SoilMLISTILPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNSSKISDFYAGYTCDEAVQEKSWLDGNQSNSTRITILH*
Ga0164304_1043066313300012986SoilMLALTILPVSIANAAFLEDYSETPTKKSLNTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNATRITILH*
Ga0164304_1121126313300012986SoilMHAVLILILISTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNSSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH*
Ga0164307_1154035113300012987SoilMHAVLILLLISTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLEGNQSNTTRITILH*
Ga0164305_1049796713300012989SoilMQTVLILMLALTILPVSIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYTDYTCDDAAQEKSWLDGNQSNTTRITILH*
Ga0164305_1104612613300012989SoilMLISTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIEIDLVNTSKISDFYAGYTCDEAVQEKSWLDGN
Ga0157307_117834413300013096SoilMLALTIIPVSIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNNTRITILH*
Ga0157378_1005908233300013297Miscanthus RhizosphereMLISTILPVGIANAAFLEDYADTPTKKSLNTILDFCKSHPDGSIAADLVNTSRISDFYAGYTCDDAAQEKSWLDGNQSNSTRITILH*
Ga0157378_1011535333300013297Miscanthus RhizosphereMLISTVLPESISNAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNSSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH*
Ga0157378_1073065613300013297Miscanthus RhizosphereMQTVLILMLASTILPVSIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNTTRITILH*
Ga0157375_1294402613300013308Miscanthus RhizosphereHAVLILMLISTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNSSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH*
Ga0163163_1125028513300014325Switchgrass RhizosphereMLISTASPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH*
Ga0173483_1072981113300015077SoilMQTVLILMLVSTILPVSIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNNTRITILH*
Ga0132258_1018141843300015371Arabidopsis RhizosphereMQTVLVLMLVSTILPVSIANAAFLEDYSETPTKKSLDTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNATRITILH*
Ga0132258_1043756853300015371Arabidopsis RhizosphereMYAVLILMLISTVLPASVANAAFLEDYAHTPTKKSLNIILDYCAANPDGSIATDLVNTSKISDFYAEYTCEDAAQEKAWLEGNQSNTARITILH*
Ga0132258_1162464723300015371Arabidopsis RhizosphereMYAVLILMLILIIMSTIKSVSVANAAFLEDYVDTPTKKSLNTILDFCASKPDGNIATDLVNTSKVSDFYAEYTCEDADSDY*
Ga0132258_1305700133300015371Arabidopsis RhizosphereFLEDYSDTPTKKSLNTILDYCQSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQTNTTRITMLH*
Ga0132256_10038862213300015372Arabidopsis RhizosphereMYAVLILMLILIIMSTIKSVSVANAAFLEDYVDTPTKKSLNTILDFCASKPDGNIATDLVNTSKISDFYAEYTCEDAAQEKAWLDGNQSNTTRITILH*
Ga0132256_10127193213300015372Arabidopsis RhizosphereMQTVLILMLASTILLPVGIANAAFLEDYSDVPTKKSLNTILDFCKSNPDGNIEHELVNTSKISDFYAGYTCDDAAQEKTWLDGNQSNTTRIT
Ga0132256_10190309313300015372Arabidopsis RhizosphereMYAVLILMLISTVLPVSIANAAFLEDYAHTSTKKSLNTILNYCAVNPDGSIATDLVNTSKISDFYAEYTCEDAAQEKAWLEGNQSNT
Ga0132257_10083710713300015373Arabidopsis RhizosphereMLISALLPVSIADAAFLKDYAHTPTKKSLNTILEFCASNPDGNIATDLVNTSKLSYFYSEYSCEDAAQEKAWLDGNQSNTTRITILH*
Ga0132257_10097770823300015373Arabidopsis RhizosphereMLISTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLEGNQSNTTRITILH*
Ga0132255_10271690213300015374Arabidopsis RhizosphereMQTVLILMLVSTILPVSIANAAFLEDYSETPTKKSLNTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNATRITILH*
Ga0132255_10542329613300015374Arabidopsis RhizosphereVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETNLVNSSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH*
Ga0132255_10599327113300015374Arabidopsis RhizosphereIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLEGNQSNTTRITILH*
Ga0184605_1015824413300018027Groundwater SedimentMHTVLILMLISTILPLGIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNTTRITILH
Ga0184608_1003723313300018028Groundwater SedimentANAAFLEDYSETPTKKSLNTILDFCKSNPDGNIATDLVNTSKISDFYAGYTCDDAAQEKSWLDGNQSNTTRITILH
Ga0184608_1022770813300018028Groundwater SedimentMQTVLILMLASTILPVSIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYADYTCDDAAEEKSWLDGNQSNTTRITILH
Ga0184608_1045294713300018028Groundwater SedimentMIMHTVLLLTLISTILPVGIASAVGIANAAFLEDYAHTPTKKSLNTILDFCKSNPDGNIAKDLVNTSKISDFYEGYTCDDAAQEKSWLDGNHDNTTRITILH
Ga0184619_1028642513300018061Groundwater SedimentMQTVLILMLVSTMLPVSIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNTTRITILH
Ga0184619_1030322913300018061Groundwater SedimentMIMHTVLLLTLISTILPVGIASAVGIANAAFLEDYAHTPTKKSLNTILDFCKSNPDGNIAKDLVNTSKISDFYEEYTCEDAAQEKSWLDGNQDNTTRITILH
Ga0184609_1014131013300018076Groundwater SedimentMQTVLILMLVSTMLPVSIANAAFLEDYSETPTKKSLNTILDFCKSNPDGNIATDLVNTSKISDFYAGYTCDDAAQEKSWLDGNQSNTTRITILH
Ga0184609_1054967913300018076Groundwater SedimentMHTVLILMLISTILPVSIANAVFLEDYAHTPTKKSLNTILDYCQSNPGGSIATDLVNTSKISDFYADYTCDKAAEDKAWLEGDQSNTTTITILH
Ga0193704_108046113300019867SoilMQTVLILMLVSTILPVSIANAAFLEDYSETPTKKSLNTILDFCKSNPDGSIATDLVNTSKISDFYAGYTCDDAAQEKSWLDGNQSNTTRITILH
Ga0193720_101365113300019868SoilMIMHTVLVLTLISTILPVGIASAVGIANAAFLEDYAHTPTKKSLNTILDFCKSNPDGNIAKDLVNTSKISDFYEGYTCDDAAQEKSWLDGNQSNTTRITILH
Ga0193705_108932413300019869SoilMQTVLILMLVSTILPVSIANAAFLEDYSETPTKKSLNTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNTTRITILH
Ga0193700_104457013300019873SoilMQIVLILMLASTILPVSIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNTTRITILH
Ga0193723_106150113300019879SoilLMLISTILPVSIANAAFLEDYSETPTKKSLNAILDYCQSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNTTRITILH
Ga0193721_107943523300020018SoilMQTVLILMLVSTILPVSIANAAFLEDYSETPTKKSLNIILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNTTRITILH
Ga0210381_1018409313300021078Groundwater SedimentMQTVLILMLASTILPVSIANAAFLEDYSETPTKKSLNTILDFCRSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNTTRI
Ga0210120_102056523300025556Natural And Restored WetlandsMHTVLILMLISTILPVSVANAAFLEDYSDTPTKKSLNTILDYCNSNPDGNIRTDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNATRITILH
Ga0207642_1051046213300025899Miscanthus RhizosphereMHAVLILMLLSTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNSSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH
Ga0207688_1106180413300025901Corn, Switchgrass And Miscanthus RhizosphereMQTVLVLMLVSTILPVSIANAAFLEDYSETPTKKSLNTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNATRITILH
Ga0207690_1111877623300025932Corn RhizosphereMLLSTALPVSIANAAFLEDYSETPTKKSLNTILDFCKSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQSNTTRITILH
Ga0207686_1013565723300025934Miscanthus RhizosphereMHALLILMLISTVLPESISNAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH
Ga0207704_1023043923300025938Miscanthus RhizosphereMHAVLILMLLSTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH
Ga0207677_1164581113300026023Miscanthus RhizosphereMHAVLILMLISTALPVSIANAAFLEDYAHTPTKKSLNTILDLCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITIL
Ga0207648_1143712223300026089Miscanthus RhizosphereMHVVLILMLISTASPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLEGNQSNSTRITILH
Ga0207698_1038076823300026142Corn RhizosphereMLLSTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH
Ga0308202_114191313300030902SoilLISTILPVGIASAVGIANAAFLEDYAHTPTKKSLNTILDFCKSNPDGNIAKELVNTSKISDFYAEYTCDDAAQEKSWLDGNHDNTTRITILH
Ga0308201_1029993013300031091SoilLISTILPVGIASAVGIANAAFLEDYAHTPTKKSLNTILDFCKSNPDGNIAKDLVNTSKISDFYAEYTCDDAAQEKSWLDGNHDNTTRITILH
Ga0308204_1028060023300031092SoilTILPVGIASAVGIANAAFLEDYAHTPTKKSLNTILDFCKSNPDGNIAKDLVNTSKISDFYEGYTCDDAAQEKSWLNGNHDNTTRITILH
Ga0308187_1048224313300031114SoilMHTVLILMLILTILPVSIANAAFLEDYAHTPTKKSLNTILDFCKSNPDGNIAKDLVNTSKISDFYAEYTCDDAAQEKSWLDGNQDNTTRITILH
Ga0310886_1017394513300031562SoilMHAVLILMLISTALPVSIANAAFLEDYAHTPTIKSLNTILDFCNSNPDGNIETDLVNSSKISDFYAGYTCDEAVQEKSWLDGNQSNATRITILH
Ga0310892_1088919313300031858SoilMHALLILMLISTVLLESISNAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNSSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH
Ga0310893_1046724413300031892SoilMHAVLILMLISTALPVSIANAAFLEDYVHTPTKKSLNTILDFCNSNPDGNIEIDLVNTSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH
Ga0310900_1048454923300031908SoilVHTSLILTLIMTILPVSIAHAAFLEDYSDSPTKKSLNTILDYCQSNPDGNIARDLVNTSKISDFYADYTCDDAAQEKSWLDGNQTNTTRITMLH
Ga0310900_1054515123300031908SoilMHVVLILMLISTASPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNSSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH
Ga0310890_1179183313300032075SoilMHAVLILMLISTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH
Ga0310895_1008864723300032122SoilLISTALPVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLEGNQSNTTRITILH
Ga0310895_1040382223300032122SoilMHTLLILTLIMTILPVSIANAAFLEDYSDTPTKKSLNTILDYCQSNPDGNIATDLVNTSKISDFYADYTCDDAAQEKSWLDGNQTNTTRITMLH
Ga0310889_1040305723300032179SoilVSIANAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH
Ga0310896_1018755213300032211SoilLHSLVMHALLILMLISTVLPESISNAAFLEDYAHTPTKKSLNTILDFCNSNPDGNIETDLVNTSKISDFYAGYTCDEAVQEKSWLDGNQSNTTRITILH


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.