NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F067865

Metagenome Family F067865

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067865
Family Type Metagenome
Number of Sequences 125
Average Sequence Length 73 residues
Representative Sequence MRFGAVLVVPFLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVALALAFLTAIVWFVLLPMFGWSPAGD
Number of Associated Samples 97
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 28.80 %
% of genes near scaffold ends (potentially truncated) 30.40 %
% of genes from short scaffolds (< 2000 bps) 83.20 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (91.200 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(10.400 % of family members)
Environment Ontology (ENVO) Unclassified
(32.800 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.400 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 55.34%    β-sheet: 0.00%    Coil/Unstructured: 44.66%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF00596Aldolase_II 23.20
PF01575MaoC_dehydratas 9.60
PF03739LptF_LptG 9.60
PF14312FG-GAP_2 3.20
PF01494FAD_binding_3 2.40
PF02518HATPase_c 2.40
PF03150CCP_MauG 1.60
PF13174TPR_6 1.60
PF03929PepSY_TM 1.60
PF00072Response_reg 0.80
PF13706Obsolete Pfam Family 0.80
PF00756Esterase 0.80
PF03795YCII 0.80
PF01522Polysacc_deac_1 0.80
PF02540NAD_synthase 0.80
PF03279Lip_A_acyltrans 0.80
PF05694SBP56 0.80
PF01467CTP_transf_like 0.80
PF01715IPPT 0.80
PF00285Citrate_synt 0.80
PF03065Glyco_hydro_57 0.80
PF03425CBM_11 0.80
PF07883Cupin_2 0.80
PF13193AMP-binding_C 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG0795Lipopolysaccharide export LptBFGC system, permease protein LptFCell wall/membrane/envelope biogenesis [M] 9.60
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 4.80
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 2.40
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 2.40
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 2.40
COG1858Cytochrome c peroxidasePosttranslational modification, protein turnover, chaperones [O] 1.60
COG3182PepSY-associated TM regionFunction unknown [S] 1.60
COG3295Uncharacterized conserved proteinFunction unknown [S] 1.60
COG0171NH3-dependent NAD+ synthetaseCoenzyme transport and metabolism [H] 0.80
COG0324tRNA A37 N6-isopentenylltransferase MiaATranslation, ribosomal structure and biogenesis [J] 0.80
COG0372Citrate synthaseEnergy production and conversion [C] 0.80
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 0.80
COG1560Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)Lipid transport and metabolism [I] 0.80
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.80
COG4261Predicted acyltransferase, LPLAT superfamilyGeneral function prediction only [R] 0.80

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.20 %
UnclassifiedrootN/A8.80 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_100459752All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium1098Open in IMG/M
3300000550|F24TB_10410615All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria867Open in IMG/M
3300000789|JGI1027J11758_12060967All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium865Open in IMG/M
3300000891|JGI10214J12806_10634126All Organisms → cellular organisms → Bacteria → Proteobacteria4414Open in IMG/M
3300003267|soilL1_10018407All Organisms → cellular organisms → Bacteria → Proteobacteria4644Open in IMG/M
3300003267|soilL1_10105144All Organisms → cellular organisms → Bacteria → Proteobacteria2491Open in IMG/M
3300003321|soilH1_10246751All Organisms → cellular organisms → Bacteria2183Open in IMG/M
3300003324|soilH2_10020900All Organisms → cellular organisms → Bacteria → Proteobacteria2562Open in IMG/M
3300004009|Ga0055437_10259253All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300004114|Ga0062593_100001391All Organisms → cellular organisms → Bacteria → Proteobacteria8109Open in IMG/M
3300004114|Ga0062593_100452839All Organisms → cellular organisms → Bacteria1170Open in IMG/M
3300004114|Ga0062593_101595536All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300004463|Ga0063356_101260090All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300004643|Ga0062591_101761257Not Available630Open in IMG/M
3300004643|Ga0062591_102351933All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300005093|Ga0062594_100149137All Organisms → cellular organisms → Bacteria1528Open in IMG/M
3300005093|Ga0062594_100347189All Organisms → cellular organisms → Bacteria → Proteobacteria1163Open in IMG/M
3300005289|Ga0065704_10216072All Organisms → cellular organisms → Bacteria → Acidobacteria1091Open in IMG/M
3300005293|Ga0065715_10854838All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
3300005294|Ga0065705_10030649All Organisms → cellular organisms → Bacteria → Proteobacteria2135Open in IMG/M
3300005294|Ga0065705_10650417All Organisms → cellular organisms → Bacteria → Proteobacteria678Open in IMG/M
3300005330|Ga0070690_100090923All Organisms → cellular organisms → Bacteria2010Open in IMG/M
3300005330|Ga0070690_100968479All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales669Open in IMG/M
3300005332|Ga0066388_106219625All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales603Open in IMG/M
3300005333|Ga0070677_10360475All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium756Open in IMG/M
3300005334|Ga0068869_100706925All Organisms → cellular organisms → Bacteria → Acidobacteria860Open in IMG/M
3300005338|Ga0068868_102316584Not Available512Open in IMG/M
3300005341|Ga0070691_10972882All Organisms → cellular organisms → Bacteria → Proteobacteria528Open in IMG/M
3300005345|Ga0070692_10561112All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium749Open in IMG/M
3300005347|Ga0070668_100892437All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300005353|Ga0070669_101278998All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300005356|Ga0070674_100470439All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300005356|Ga0070674_100667346All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium885Open in IMG/M
3300005364|Ga0070673_100583950All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1018Open in IMG/M
3300005366|Ga0070659_100729680All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300005441|Ga0070700_100036027All Organisms → cellular organisms → Bacteria2999Open in IMG/M
3300005444|Ga0070694_100993965All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium696Open in IMG/M
3300005458|Ga0070681_11721589All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300005530|Ga0070679_100339576All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1450Open in IMG/M
3300005545|Ga0070695_100124349All Organisms → cellular organisms → Bacteria1769Open in IMG/M
3300005545|Ga0070695_100395387All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1046Open in IMG/M
3300005564|Ga0070664_100745956All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300005615|Ga0070702_100486785All Organisms → cellular organisms → Bacteria → Acidobacteria903Open in IMG/M
3300005713|Ga0066905_100314821All Organisms → cellular organisms → Bacteria → Acidobacteria1235Open in IMG/M
3300005713|Ga0066905_101936003All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300005713|Ga0066905_102149369All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300005719|Ga0068861_101271819All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium714Open in IMG/M
3300005879|Ga0075295_1011325All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium942Open in IMG/M
3300005887|Ga0075292_1070036All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300006237|Ga0097621_100174921All Organisms → cellular organisms → Bacteria → Proteobacteria1852Open in IMG/M
3300006358|Ga0068871_100080456All Organisms → cellular organisms → Bacteria2697Open in IMG/M
3300006844|Ga0075428_100008208All Organisms → cellular organisms → Bacteria11583Open in IMG/M
3300006844|Ga0075428_100508895All Organisms → cellular organisms → Bacteria → Acidobacteria1288Open in IMG/M
3300006846|Ga0075430_101244251Not Available612Open in IMG/M
3300006865|Ga0073934_10004632All Organisms → cellular organisms → Bacteria22501Open in IMG/M
3300006880|Ga0075429_100406155All Organisms → cellular organisms → Bacteria → Acidobacteria1193Open in IMG/M
3300007004|Ga0079218_12730672Not Available590Open in IMG/M
3300009094|Ga0111539_10324968All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1790Open in IMG/M
3300009094|Ga0111539_13207002All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300009100|Ga0075418_11192483All Organisms → cellular organisms → Bacteria → Acidobacteria825Open in IMG/M
3300009148|Ga0105243_11233588All Organisms → cellular organisms → Bacteria → Acidobacteria762Open in IMG/M
3300009148|Ga0105243_12778128All Organisms → cellular organisms → Bacteria → Proteobacteria530Open in IMG/M
3300009156|Ga0111538_11254582All Organisms → cellular organisms → Bacteria → Acidobacteria936Open in IMG/M
3300009156|Ga0111538_12725883All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium619Open in IMG/M
3300009162|Ga0075423_10058064All Organisms → cellular organisms → Bacteria → Acidobacteria3999Open in IMG/M
3300009162|Ga0075423_12017859All Organisms → cellular organisms → Bacteria → Acidobacteria625Open in IMG/M
3300009176|Ga0105242_10612283All Organisms → cellular organisms → Bacteria1053Open in IMG/M
3300009176|Ga0105242_13224120All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300009177|Ga0105248_10132220All Organisms → cellular organisms → Bacteria → Proteobacteria2816Open in IMG/M
3300010047|Ga0126382_10740308Not Available830Open in IMG/M
3300010359|Ga0126376_12543263All Organisms → cellular organisms → Bacteria → Acidobacteria560Open in IMG/M
3300010362|Ga0126377_10101118All Organisms → cellular organisms → Bacteria → Acidobacteria2630Open in IMG/M
3300010362|Ga0126377_10193168All Organisms → cellular organisms → Bacteria1945Open in IMG/M
3300010362|Ga0126377_12373774Not Available606Open in IMG/M
3300010399|Ga0134127_10151990All Organisms → cellular organisms → Bacteria → Acidobacteria2103Open in IMG/M
3300010400|Ga0134122_12646005All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300010401|Ga0134121_11245853All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300010401|Ga0134121_11323383All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300010403|Ga0134123_11910499All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300012511|Ga0157332_1089995All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300012922|Ga0137394_10926558All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium726Open in IMG/M
3300012948|Ga0126375_10038129All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2456Open in IMG/M
3300014326|Ga0157380_10236149All Organisms → cellular organisms → Bacteria1645Open in IMG/M
3300014745|Ga0157377_10281738All Organisms → cellular organisms → Bacteria → Acidobacteria1090Open in IMG/M
3300015371|Ga0132258_11053245All Organisms → cellular organisms → Bacteria2056Open in IMG/M
3300015371|Ga0132258_11106244All Organisms → cellular organisms → Bacteria → Acidobacteria2003Open in IMG/M
3300015371|Ga0132258_11131696All Organisms → cellular organisms → Bacteria → Proteobacteria1979Open in IMG/M
3300015371|Ga0132258_11906740All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1496Open in IMG/M
3300015372|Ga0132256_103805124All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300015373|Ga0132257_103451619Not Available575Open in IMG/M
3300015374|Ga0132255_104959495All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300018079|Ga0184627_10202072All Organisms → cellular organisms → Bacteria → Acidobacteria1050Open in IMG/M
3300018422|Ga0190265_11149530Not Available896Open in IMG/M
3300018469|Ga0190270_12133484Not Available620Open in IMG/M
3300020005|Ga0193697_1053439All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1002Open in IMG/M
3300025271|Ga0207666_1053889All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium640Open in IMG/M
3300025310|Ga0209172_10003726All Organisms → cellular organisms → Bacteria → Acidobacteria22413Open in IMG/M
3300025315|Ga0207697_10127600All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1098Open in IMG/M
3300025893|Ga0207682_10081561All Organisms → cellular organisms → Bacteria → Proteobacteria1387Open in IMG/M
3300025912|Ga0207707_11652750Not Available503Open in IMG/M
3300025917|Ga0207660_10448221All Organisms → cellular organisms → Bacteria1043Open in IMG/M
3300025919|Ga0207657_11260837All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium560Open in IMG/M
3300025920|Ga0207649_10187703All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium1451Open in IMG/M
3300025932|Ga0207690_10732954All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium814Open in IMG/M
3300025935|Ga0207709_10617349All Organisms → cellular organisms → Bacteria → Acidobacteria860Open in IMG/M
3300025937|Ga0207669_11143725All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium658Open in IMG/M
3300025940|Ga0207691_10056931All Organisms → cellular organisms → Bacteria → Proteobacteria3560Open in IMG/M
3300025941|Ga0207711_10523202All Organisms → cellular organisms → Bacteria → Acidobacteria1106Open in IMG/M
3300025972|Ga0207668_10124779All Organisms → cellular organisms → Bacteria1956Open in IMG/M
3300025986|Ga0207658_11139142All Organisms → cellular organisms → Bacteria → Acidobacteria713Open in IMG/M
3300026041|Ga0207639_10976901All Organisms → cellular organisms → Bacteria → Acidobacteria793Open in IMG/M
3300026075|Ga0207708_10132941All Organisms → cellular organisms → Bacteria1946Open in IMG/M
3300026089|Ga0207648_10259568All Organisms → cellular organisms → Bacteria1550Open in IMG/M
3300026118|Ga0207675_102283082All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium555Open in IMG/M
3300027909|Ga0209382_10752006Not Available1043Open in IMG/M
3300027909|Ga0209382_11425424All Organisms → cellular organisms → Bacteria → Acidobacteria694Open in IMG/M
3300031152|Ga0307501_10009292All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1587Open in IMG/M
3300031562|Ga0310886_11084797All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300031740|Ga0307468_100282115All Organisms → cellular organisms → Bacteria → Acidobacteria1192Open in IMG/M
3300031740|Ga0307468_100762251All Organisms → cellular organisms → Bacteria → Acidobacteria819Open in IMG/M
3300031740|Ga0307468_101411271All Organisms → cellular organisms → Bacteria → Acidobacteria640Open in IMG/M
3300031740|Ga0307468_102284202All Organisms → cellular organisms → Bacteria → Proteobacteria525Open in IMG/M
3300031908|Ga0310900_10164890All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1518Open in IMG/M
3300031908|Ga0310900_11034154All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300032180|Ga0307471_100884263All Organisms → cellular organisms → Bacteria → Acidobacteria1061Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.40%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.60%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.00%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil3.20%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.20%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.40%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.40%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment1.60%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.60%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.60%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.60%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.60%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.60%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.60%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.80%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.80%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.80%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.80%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.80%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004009Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005879Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301EnvironmentalOpen in IMG/M
3300005887Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012511Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300020005Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2EnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10045975223300000364SoilVTRVLVVPLLVVIGLLIIAVLLPSKRDSSVAXWWARVCGQTXXFTRVLLALAFLAAIVWFVLLPMFGWPAVDR*
F24TB_1041061523300000550SoilVTRVLVVPFLVVIGLLIIALLLPSKRDSSVAAWWARVCGQAIFFTRVLLALAFLAVIVWFLVLPMFGWPPTGR*
JGI1027J11758_1206096723300000789SoilVTRVLVVPLLVVIGLLIIAVLLPSKRDSSVATWWARVCGQTIFFTRVLLALAFLAAIVWFVLLPMFGWPAVDR*
JGI10214J12806_1063412633300000891SoilVPFLITLGLLIIAILLPSKRDSSVAAWWARVCGQAIFFSRVAVALAFLAAIVWFVLLPMFGLVPAARDGAP*
soilL1_1001840713300003267Sugarcane Root And Bulk SoilVTRVLVVPFLIVIGLLIIAILLPSKRDSSVAAWWARVCGQAIFFSRVAVALAFLAAIVWFILLPMFGVPQSLF*
soilL1_1010514433300003267Sugarcane Root And Bulk SoilMRFGSVLVVPCLIVVGLLLIALVLPSKRDTSVAAWWARVRYQAMFSARVAVALAFLTAIVWFVLLPMFSPLF*
soilH1_1024675113300003321Sugarcane Root And Bulk SoilVRVLVIPFLVVVGLLLIALVLPSKRDTSLAAWWTRVRYQANFYTRVVLAILLIGMAVWYIVLPLLGWRLPPY*
soilH2_1002090043300003324Sugarcane Root And Bulk SoilVTRVLVVPFLIVLGLLIIALLLPTKHDSSVSAWWARVCGQAIFFARLALALAFLTAIVWFILLPMLGRPQSLF*
Ga0055437_1025925323300004009Natural And Restored WetlandsVGRVLVVPLLVVIGLLIIAVLLPSKRDSSVAAWWARVCGQTIFFTQVLLALAFLAAIVWFVLLPMFGRPAIER*
Ga0062593_10000139153300004114SoilVIRVLVVPFLITLGLLIIAILLPSKRDSSVAAWWARVCGQAIFFSRVAVALAFLAAIVWFVLLPMFGLVPAARDGAP*
Ga0062593_10045283923300004114SoilVARVLFVPFLIVLGLLLIALLLPSKRDTSVAAWWARVCGQAIVFSRIAVALAFLAAIVWFLVLPMLGWLPARP*
Ga0062593_10159553623300004114SoilMRFGAVLVVPFLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVALALAFLTAIVWFVLLPMFGWSPAGD*
Ga0063356_10126009023300004463Arabidopsis Thaliana RhizosphereMRTVVVAFLIVLGLLLIALVLPSKHDTSVAAWWARVRYQMSLSARAVLVLAFFAAIVWFVLVPLFGWPLLGR*
Ga0062591_10176125723300004643SoilVRILVIPFAIVVVLLVIALVLPSKTDTSVTAWWARVRYQGNVFVRAALAVACLAAIVWFILLPLFGWTSIGR*
Ga0062591_10235193323300004643SoilLVVPFLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVALALAFLTAIVWFVLLPMFGWSPAGD*
Ga0062594_10014913723300005093SoilVARVLFVPFLIVLGLLLIALLLPSKSDTSVAAWWARVCGQAIFFSRIVVALAFLAAIVWLLVLPMLGWPPAGP*
Ga0062594_10034718923300005093SoilMRFGAVLVVPFLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVALALAFLTAIIWFLVLPMFGWLPAGD*
Ga0065704_1021607213300005289Switchgrass RhizosphereVGRVLVLPFLIVIGLLIIALLLPSKRDSSVAAWWARVCGQAMFFSRVVLALAFLAAIVWFVLLPLLPVR*
Ga0065715_1085483823300005293Miscanthus RhizosphereMRFGSVLVVPFLIVVGLLLIALVLPSKHDTSVAAWWARVRYQAMFSARVAVALAFLAAIVWFVLLPMFSPMF*
Ga0065705_1003064913300005294Switchgrass RhizosphereVGRVLVLPFLIVIGLLIIAILLPSKRDSSVAAWWARVCGQAMFFSRVVLALAFLAAIVWFVLLPLLPVR
Ga0065705_1065041723300005294Switchgrass RhizosphereMRFGAVLVVPFLIVIGLLLIALVLPSKHDTSVAAWWARVRYQAMFGARVALALAFLTAIVWFLVLPMFGWSPAGD*
Ga0070690_10009092323300005330Switchgrass RhizosphereVARVLFVPFLIVLGLLLIALLLPSKRDTSVAAWWARVCGQAIVFSRIAVALAFLAAIVWFHVLPMLGWLPARP*
Ga0070690_10096847923300005330Switchgrass RhizosphereMRFGAVLVVPTLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVAVALAFLTAIVRFLVLPMFGWSPPGD*
Ga0066388_10621962523300005332Tropical Forest SoilMRFGAVLVVPTLIVIGLLLIALVLPSKRDTSIGAWWARVCTQAMFYTRLALTLALLAAIAWFVLLPMFSPLF*
Ga0070677_1036047523300005333Miscanthus RhizosphereVARVLFVPFLIVLGLLLIALLLPSKSDTSVAAWWARVCGQAIVFSRIAVALAFLAAIVWFLVLPMLGWLPARP*
Ga0068869_10070692523300005334Miscanthus RhizosphereVIRVLVVPFLITLGLLIIAILLPSKRDSSVAAWWARVCGQAIFFSRVAVALAFLAAIVWFVLLPM
Ga0068868_10231658423300005338Miscanthus RhizosphereVARVLFVPFLIVLGLLLIALLLPSKSDTSVAAWWARVCGQAIFFSRIVVALAFLAAIVWLLVLPMLG
Ga0070691_1097288213300005341Corn, Switchgrass And Miscanthus RhizosphereVRVIVIPFLVALGLLIIALVLPSKQDTSVAAWWARVRYQMSFFARIALALACIGGIVWYILLPLFGWRLLGFGN*
Ga0070692_1056111213300005345Corn, Switchgrass And Miscanthus RhizosphereVRVIVIPFLVAVGLLIIALVLPSKQDTSVAAWWTRVRYQMNFFARVALVLAGIAAIVWYILLPFFGWRSLDFGN*
Ga0070668_10089243723300005347Switchgrass RhizosphereVARVLFVPFLIVLGLLLIALLLPSKSDTSVAAWWARVCGQAIFFSRIVVALAFLAAIVWLLVL
Ga0070669_10127899813300005353Switchgrass RhizosphereVARVLFVPFLIVLGLLLIALLLPSKRDTSVAAWWARVCGQAIVFSRIAVALAFLAAIVWFLVLPMLGW
Ga0070674_10047043923300005356Miscanthus RhizosphereVARVLFVPFLIVLGLLLIALLLPSKSDTSVAAWWARVCGQAIFFSRVVIALAFLAAIVWFLVLPMLGWSPAGR*
Ga0070674_10066734623300005356Miscanthus RhizosphereVRVIVIPFLVALGLLIIALVLPSKQDTSVAAWWARVRYQMNFFARIALALACIGGIVWYILLPLFGWRLLGFGN*
Ga0070673_10058395023300005364Switchgrass RhizosphereMRFGAVLVVPFLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVAVALAFLTAIVRFLVLPMFGWSPPGD*
Ga0070659_10072968013300005366Corn RhizosphereARVLFVPFLIVLGLLLIALLLPSKRDTSVAAWWARVCGQAIVFSRIAVALAFLAAIVWFLVLPMLGWLPARP*
Ga0070700_10003602713300005441Corn, Switchgrass And Miscanthus RhizosphereVRVIVIPFLVALGLLIIALVLPSKQDTSVAAWWTRVRYQMNFFARIALALACIGGIVWYILLPLFGWRLLGFGN*
Ga0070694_10099396523300005444Corn, Switchgrass And Miscanthus RhizosphereLRVLVVPFLIVVGLLIIAILLPSKRDSSVAAWWARVCGQAIFFSRVAIAIAFLAAIVWFVVLPMFGLVPALR*
Ga0070681_1172158923300005458Corn RhizosphereVIPFAIVVALLVIALVLPSKTDTSVTAWWARVRHQGNVFVRAALALACLAAIVWFILLPLFGWTSIGR*
Ga0070679_10033957613300005530Corn RhizosphereSGAANTRASRTAMRFGSVLVVPFLIVVGLLLIALVLPSKHDTSVAAWWARVRYQAMFSARVAVALAFLAAIVWFVLLPMFSPMF*
Ga0070695_10012434923300005545Corn, Switchgrass And Miscanthus RhizosphereVRVIVIPFLVAVGLLLIALVLPSKHDTSVAAWWRRVRYQMNFFARVALVLAGIAAIVWYILLPFFGWRSLDFGN*
Ga0070695_10039538723300005545Corn, Switchgrass And Miscanthus RhizosphereVRILVIPFAIVVALLVIALVLPSKTDTSVTAWWARVRHQGNVFVRAALALACLAAIVWFILLPLFGWPLFGR*
Ga0070664_10074595623300005564Corn RhizosphereARVLFVPFLIVLGLLLIALLLPSKSDTSVAAWWARVCGQAIVFSRIAVALAFLAAIVWFLVLPMLGWLPARP*
Ga0070702_10048678523300005615Corn, Switchgrass And Miscanthus RhizosphereMRFGAVLVVPFLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVALALAFLTAIIWFLVLPMFGWLPA
Ga0066905_10031482133300005713Tropical Forest SoilVARVLVVPLLVVIGLLIIAVLLPSKRDSSVAAWWARVCGQTIFFTRVLLALAFLAAIVWFVLLPMFGRPAVER*
Ga0066905_10193600313300005713Tropical Forest SoilAVLVIPFLIVVGLLLIAILLPSKRDTSLAAWWARVCGEAIFFSRVALALAFLAMIVWFVLLPMFSPLF*
Ga0066905_10214936923300005713Tropical Forest SoilVARVLVVPFLIVIGLLIIAVLLPSKRDSSVAAWWARVCGQAIFFTRVVLALAFLTAIVWFILLPMFGRPQSLF*
Ga0068861_10127181923300005719Switchgrass RhizosphereVLRVLVVPFLIVVGLLIIAILLPSKHDSSVAAWWARVCGQAIFFSRVAIAIAFLAAIVWFVVLPMFGLVPALR*
Ga0075295_101132513300005879Rice Paddy SoilGTKVRVLVIPFLVAVGLLVIALVLPSKQDTSVAAWWARVRHQMNFFARVALALAGIAGIVWYVLLPLFGWRSLGFGN*
Ga0075292_107003623300005887Rice Paddy SoilVRIIVIPFLVVVGLLLIALVLPSKQDTSVAAWWARVRHQMNFFARVALALAGIAGIVWYVLLPLFGWRSLGFGN*
Ga0097621_10017492133300006237Miscanthus RhizosphereAGTHVCRGTMRFGAVLVVPFLIVIGLLLIALVLPSKHDTSVAAWWARVRYQAMFGARVALALAFLTAIVWFLVLPMFGWSPAGD*
Ga0068871_10008045613300006358Miscanthus RhizosphereHVCRGTMRFGAVLVVPFLIVIGLLLIALVLPSKHDTSVAAWWARVRYQAMFGARVALALAFLTAIVWFLVLPMFGWSPAGD*
Ga0075428_10000820853300006844Populus RhizosphereMRAVVVALLIVLGLLLIALVLPSKHDTSVVAWWGRVRYQMSFFARAALALAFVAAIVWFVLVPLFGWPY*
Ga0075428_10050889523300006844Populus RhizosphereVLRVLVVPFLIVVGLLIIAILLPSKHDSSVAAWWARVCGQAIFFSRVAIAIAFLAAIVWFVVLPMFGLVPAVR*
Ga0075430_10124425113300006846Populus RhizosphereMRAVVVALLIVLGLLLIALVLPSKHDTSVVAWWGRVRYQMSFFARAALALAFVAAIVWFVLVP
Ga0073934_1000463273300006865Hot Spring SedimentMRILSVPLLIVLGLLLIALLLPSTRDTSVAAWWARVRYQMIFFARIALALTCIAGIIWFVLLPLLDGRSIGR*
Ga0075429_10040615523300006880Populus RhizosphereLGRVLVVPFLIAIGLLIIALLLPSKRDSSVAAWWARVCGQAIFFSRVAIAVAFLAAIVWFILLPMFGWPLIDR*
Ga0079218_1273067213300007004Agricultural SoilMRTVVVGFLIVLGLLLIALVLPSKHDTSVAAWWARVRYQTSFSARAVLALAFVAAIVWFV
Ga0111539_1032496823300009094Populus RhizosphereVTRVLFLPFLIVVGLLLIALLLPSKHDTSVAAWWARVCGQAIFFSRVVIALAFLAAIVWFLVLPMLGWSPAGR*
Ga0111539_1320700223300009094Populus RhizosphereVARVLFVPFLIVLGLLLIALLLPSKSDTSVAAWWARVCGQAIFFSRIAVALAFLAAIVWFLVLPMLGRPPATP*
Ga0075418_1119248323300009100Populus RhizosphereVLRVLVVPFLIVVGLLIIAILLPSKHDSSVAAWWARVCGQAIFFSRVAIAIAFLAAIVWFVVLPMFGLVPA
Ga0105243_1123358823300009148Miscanthus RhizosphereVIRVLVVPFLITLGLLIIAILLPSKRDSSVAAWWARVCGQAIFFSRVAVALAFLAAIVWFVLLPMFGLV
Ga0105243_1277812823300009148Miscanthus RhizosphereVRVIVIPFLVAVGLLLIALVLPSKHDTSVAVWWRRVRYQMNFFARVALVLAGIAAIVWYILLPFFGWRSLDFGN*
Ga0111538_1125458223300009156Populus RhizosphereVARVLFVPFLIVLGLLLIALLLPSKRDTSVAAWWARVCGQAIVFSRIAVALAFLAAIVWFLVLPMLGWLPAKP*
Ga0111538_1272588323300009156Populus RhizosphereVARVLVVPLLVVIGLLIIAVLLPSKRDSSVAAWWARVCGQTIFFSGVLLALASLAAIVWFVLLPMFGRPAVER*
Ga0075423_1005806433300009162Populus RhizosphereVARVLVVPLLVVIGLLIIAVLLPSKRDSSVAAWWARVCGQTIFFSGVLLALAFLAAIVWFVLLPMFGRPAVER*
Ga0075423_1201785923300009162Populus RhizosphereLGRVLVVPFLIAIGLLIIALLLPSKGDSSVSAWWARVCGQAIFFSRVAVALAFLAVIVWFVLLPMFSPLF*
Ga0105242_1061228323300009176Miscanthus RhizosphereLRVLVVPFLIVVGLLIIAILLPSKRDSSVAGWWARVCGQAMFFSRVAVALAFLAAIVWFLVLPMFGWLPAGP*
Ga0105242_1322412013300009176Miscanthus RhizosphereMRFGAVLVVPFLIVMGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVALALAFLTAIIWFLVLPMF
Ga0105248_1013222033300009177Switchgrass RhizosphereMRFGAVLVVPFLIVMGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVALALAFLTAIIWFLVLPMFGWLPAGD*
Ga0126382_1074030823300010047Tropical Forest SoilMRFGAVLVVPFLIVVALLLIALVLPSKHDTSVAAWWARVCGQAIFFARVALALAFLTAIVWFVLLPMFSPFF*
Ga0126376_1254326313300010359Tropical Forest SoilMRFGAVLVVPFLIVIGLLLIALVLPSKRDTSVAAWWARVRYQATFGARVALALVFLTAIVWFLVLPMFGW
Ga0126377_1010111833300010362Tropical Forest SoilMRFGAVLVVPFLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVALALAFLTAIVWFLVLPMFGWSPPGD*
Ga0126377_1019316823300010362Tropical Forest SoilMAARILLIPFLVVAGLLLIALLLPSKGDTSVAAWWARVRYQALFSLRVVLALLCVAVIIRFVLLPMFGW*
Ga0126377_1237377423300010362Tropical Forest SoilIPFLVILGLLVIALILPSKRDTSVAAWCARVRYQAVFFVRAALVLAGLAAIVWYLLLPMLGW*
Ga0134127_1015199033300010399Terrestrial SoilVGRVLVVPFLIVIGLLIIALLLPSKRDSSVAAWWARVCGQAMFFSRVAVALAFLAAIVWFILLPMFRRPQSLF*
Ga0134122_1264600513300010400Terrestrial SoilQPGVHRQDQSFVSTVVRVLVIPFLVVIGLLLIALVLPSKRDTSVAAWWTRVSYQASFYARVVLALLLIGMAVWYVVLPLVGWQLPR*
Ga0134121_1124585323300010401Terrestrial SoilVRILVIPFLVVLGLLVIALILPSKRDTSVAAWWARVRYQAMFSARVAVALAFLAAIVWFVLLPMFSPMF*
Ga0134121_1132338323300010401Terrestrial SoilVRVLVIPFLVVIGLLLIALVLPSKRDTSVAAWWTRVSYQASFYARVVLALLLIGMAVWYVVLPLVGWQLPR*
Ga0134123_1191049913300010403Terrestrial SoilAGTHVCRGTMRFGAVLVVPFLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVALALAFLTAIIWFLVLPMFGWLPAGD*
Ga0157332_108999523300012511SoilRGTMRFGAVLVVPTLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVAVALAFLTAIVRFLVLPMFGWSPAGD*
Ga0137394_1092655833300012922Vadose Zone SoilVRVIVIPFLVVVGLLLIALVLPSKQDTSVAAWWARVRYQMNFFARVALALAGIAGIVWYILLPLFGWRSLDFGN*
Ga0126375_1003812923300012948Tropical Forest SoilVARVLVVPLLVVIGLLIIAVLLPSKHDSSVAAWWARVCGQTIFFTRVLLALAFLAAIVWFVLLPMFGRPAAER*
Ga0157380_1023614923300014326Switchgrass RhizosphereVKLLVVPFLIVLGLLLIALVLPSKRDTSVAAWWARVRLQMNFFARAALALACLAGIVWFVLLPLFGWRPIGF*
Ga0157377_1028173813300014745Miscanthus RhizosphereMRFGAVLVVPFLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVALALAFLTAIIWFLVLPMFGWLPAGD
Ga0132258_1105324533300015371Arabidopsis RhizosphereRNRRVRILVIPFLVVLGLLVIALILPSKRDTSVAAWWARVRYQAVFFVRAALVVAGLAAIVWYLLLPMIGWP*
Ga0132258_1110624423300015371Arabidopsis RhizosphereVRVLVIPFLVAVGLLLIALVLPSKQDTSVAAWWTRVRYQMNYFARVALALACIAGIVWYILLPFFGWRSLDFGN*
Ga0132258_1113169623300015371Arabidopsis RhizosphereMRFGAVLVVPTLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVAVALAFLTVIVRFLVLPMFGWSPPGD*
Ga0132258_1190674023300015371Arabidopsis RhizosphereVVRVVIIPVLVAVGLLLIALVLPSKHDTSVAAWWARVRCQMNYFARVALALACIAGIVWYILLPFFGWRSLDFGN*
Ga0132256_10380512413300015372Arabidopsis RhizosphereVRVLLIPFLIVVGLLLLALVLPSKHDTSVAAWWTRVRHQANFYLRVALAIALVSAVVRYVLWPLVGWPGNTP*
Ga0132257_10345161913300015373Arabidopsis RhizosphereMRFGAVLVVPFLIVIGLLLIALVLPSKHDTSVAAWWARVRYQAMFGARVALALAFLTAIVWFLVLPMFGWS
Ga0132255_10495949513300015374Arabidopsis RhizosphereNRRVRILVIPFLVVLGLLVIALILPSKRDTSVAAWWARVRYQAVFFVRAALVVAGLAAIVWYLLLPMIGWP*
Ga0184627_1020207223300018079Groundwater SedimentMRAVVVAFLIVLGLLLMALVLPSKHDTSVAAWWGRVRYQMSFLARAALALAFVAAIVWFILVPLFGWPLLGR
Ga0190265_1114953013300018422SoilMRGLAVPLLVVLALLVIALLLPSKRDTSVSAWWARVRYQAIFIVRIALALACIAGIVWFVLMPLFGEGSAPR
Ga0190270_1213348413300018469SoilMRAVVVAFLIVLGLLLIALVLPSKHDTSVAAWWARVRYQMSVFARAALALAFVAAIVWSVLVPLFGWPLLGR
Ga0193697_105343923300020005SoilMRVVVIPFLVAVGLLLIALVLPSKQDTSVAAWWARVRYQMNFFARVALALACIVWYVLLPFFGWRSLDFGN
Ga0207666_105388923300025271Corn, Switchgrass And Miscanthus RhizosphereVARVLFVPFLIVLGLLLIALLLPSKSDTSVAAWWARVCGQAIFFSRIVVALAFLAAIVWLLVLPMLGWPPAGP
Ga0209172_10003726253300025310Hot Spring SedimentMRILSVPLLIVLGLLLIALLLPSTRDTSVAAWWARVRYQMIFFARIALALTCIAGIIWFVLLPLLDGRSIGR
Ga0207697_1012760023300025315Corn, Switchgrass And Miscanthus RhizosphereVARVLFVPFLIVLGLLLIALLLPSKRDTSVAAWWARVCGQAIVFSRIAVALAFLAAIVWFLVLPMLGWLPARP
Ga0207682_1008156123300025893Miscanthus RhizosphereMRFGAVLVVPTLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVAVALAFLTAIVRFLVLPMFGWSPPGD
Ga0207707_1165275023300025912Corn RhizosphereVIRVLVVPFLITLGLLIIAILLPSKRDSSVAAWWARVCGQAIFFSRVAVALAFLAAIVWFVLLPMFGLVPAARDGAP
Ga0207660_1044822133300025917Corn RhizosphereMRFGSVLVVPFLIVVGLLLIALVLPSKHDTSVAAWWARVRYQAMFSARVAVALAFLAAIVWFVLLPMFSPMF
Ga0207657_1126083723300025919Corn RhizosphereVARVLFVPFLIVLGLLLIALLLPSKSDTSVAAWWARVCGQAIFFSRIVVALAFLAAIVWFLVLPMLGWLPARP
Ga0207649_1018770333300025920Corn RhizosphereHVARVLFVPFLIVLGLLLIALLLPSKSDTSVAAWWARVCGQAIVFSRIAVALAFLAAIVWFLVLPMLGWLPARP
Ga0207690_1073295423300025932Corn RhizosphereARVLFVPFLIVLGLLLIALLLPSKRDTSVAAWWARVCGQAIVFSRIAVALAFLAAIVWFLVLPMLGWLPARP
Ga0207709_1061734933300025935Miscanthus RhizosphereVRVIVIPFLVAVGLLLIALVLPSKHDTSVAVWWRRVRYQMNFFARVALVLAGIAAIVWYILLPFFGWRSLDFGN
Ga0207669_1114372523300025937Miscanthus RhizosphereVARVLFVPFLIVLGLLLIALLLPSKSDTSVAAWWARVCGQAIFFSRIVVALAFLAAIVWLLVLP
Ga0207691_1005693133300025940Miscanthus RhizosphereMRFGAVLVVPFLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVAVALAFLTAIVRFLVLPMFGWSPPGD
Ga0207711_1052320213300025941Switchgrass RhizosphereMRFGAVLVVPFLIVMGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVALALAFLTAIIWFLVLPMFGWLPAGD
Ga0207668_1012477913300025972Switchgrass RhizosphereHVARVLFVPFLIVLGLLLIALLLPSKSDTSVAAWWARVCGQAIFFSRIVVALAFLAAIVWLLVLPMLGWPPAGP
Ga0207658_1113914223300025986Switchgrass RhizosphereMRFGAVLVVPFLIVIGLLLIALVLPSKRDTSVAAWWARVRYQAMFGARVALALAFLTAIIWFLVLPMFGWSPAGD
Ga0207639_1097690123300026041Corn RhizosphereMRFGAVLVVPFLIVIGLLLIALVLPSKHDTSVAAWWARVRYQAMFGARVALALAFLTAIVWFLVLPMFGWSPAGD
Ga0207708_1013294123300026075Corn, Switchgrass And Miscanthus RhizosphereVRVIVIPFLVALGLLIIALVLPSKQDTSVAAWWTRVRYQMNFFARIALALACIGGIVWYILLPLFGWRLLGFGN
Ga0207648_1025956813300026089Miscanthus RhizosphereVRVIVIPFLVAVGLLLIALVLPSKHDTSVAVWWRRVRYQMNFFARVALVLAGIAAIVWYILLPF
Ga0207675_10228308213300026118Switchgrass RhizosphereIVVGLLIIAILLPSKRDSSVAAWWARVCGQAIFFSRVAIAIAFLAAIVWFVVLPMFGLVPALR
Ga0209382_1075200623300027909Populus RhizosphereMRAVVVALLIVLGLLLIALVLPSKHDTSVVAWWGRVRYQMSFFARAALALAFVAAIVWFVLVPLFGWPY
Ga0209382_1142542423300027909Populus RhizosphereVARVLVVPLLVVIGLLIIAVLLPSKRDSSVAAWWARVCGQTIFFTRVLLALAFLAAIVWFVLLPMFGRPAVER
Ga0307501_1000929223300031152SoilVRIIVIPFLVVVGLLLIALVLPSKQDTSVAAWWARVRYQMNFFARVALALAGIVGIVWYVLMPLFGWRPLGFGN
Ga0310886_1108479713300031562SoilPFLIVIGLLLIALVLPSKHDTSVAAWWARVCGQAIFFSRIVVALAFLAAIVWLLVLPMLGWPPAGP
Ga0307468_10028211523300031740Hardwood Forest SoilVVRVVIIPVLVAVGLLLIALVLPSKHDTSVAAWWARVRYQMNYFARVALALACIAGIVWYILLPFFGWRSLDFGN
Ga0307468_10076225133300031740Hardwood Forest SoilVRVLVIPFLVAFGLLLIALVLPSKQDTSVAAWWARVRYQMNFFARVVLALACIAGIVWYVLLPLFGWRPLDFGN
Ga0307468_10141127123300031740Hardwood Forest SoilVLRVLVVPFLIVVGLLIIAILLPSKHDSSVAAWWARVCGQAIFFSRVAIAIAFLAAIVWFVVLPMFGLVPALR
Ga0307468_10228420213300031740Hardwood Forest SoilVRVIVIPVLIAVGLLLIALVLPSKHDTSVAAWWRRVRYQMNFFARVALVLAGIAAIVWYILLPFFGWRSLDFGN
Ga0310900_1016489023300031908SoilMRFGAVLVVPFLIVIGLLLIALVLPSKHDTSVAAWWARVCGQAIFFSRIVVALAFLAAIVWLLVLPMLGWPPAGP
Ga0310900_1103415423300031908SoilVRVIVIPFLVAVGLLIIALVLPSKQDTSVAAWWTRVRYQMNFFARVALVLAGIAAIVWYILLPFFGWRSLDFGN
Ga0307471_10088426323300032180Hardwood Forest SoilVRVLVIPFLVAVGLLIIALVLPSKQDTSVAAWWARVRYQMNFFARVVLALACIAGIVWYVLLPLFGWRPLDFGN

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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