Metagenome / Metatranscriptome Family F067918

Basic Information
Family ID	F067918
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	114 residues
Representative Sequence	MSKQTWSQDTIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA
Number of Associated Samples	115
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.60 %
% of genes near scaffold ends (potentially truncated)	32.00 %
% of genes from short scaffolds (< 2000 bps)	81.60 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (51.200 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (28.000 % of family members)
Environment Ontology (ENVO)	Unclassified (41.600 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.200 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 10.34% β-sheet: 18.10% Coil/Unstructured: 71.55%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF03466	LysR_substrate	17.60
PF00126	HTH_1	14.40
PF02826	2-Hacid_dh_C	8.00
PF00313	CSD	2.40
PF00528	BPD_transp_1	2.40
PF04909	Amidohydro_2	1.60
PF03401	TctC	0.80
PF01266	DAO	0.80
PF00005	ABC_tran	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.80

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.20 %
All Organisms	root	All Organisms	48.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.20 %
cellular organisms	root	All Organisms → cellular organisms	48.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.20 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.60 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.20 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.00 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.00 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.60 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.80 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.20 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.60 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.60 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.80 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.80 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.20 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.60 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.80 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.80 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.80 %
Alicyclobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae	0.80 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.20 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.80 %
Kyrpidia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Kyrpidia	0.80 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.80 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.80 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.80 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.20 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.80 %
Kyrpidia tusciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Kyrpidia → Kyrpidia tusciae	0.80 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.80 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.80 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.80 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_119198548	Not Available	653	Open in IMG/M
3300002568\|C688J35102_120061308	Not Available	864	Open in IMG/M
3300004114\|Ga0062593_100546635	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300005093\|Ga0062594_103414988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Kyrpidia → Kyrpidia tusciae	500	Open in IMG/M
3300005104\|Ga0066818_1006955	Not Available	775	Open in IMG/M
3300005159\|Ga0066808_1015886	Not Available	711	Open in IMG/M
3300005162\|Ga0066814_10004769	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300005165\|Ga0066869_10002964	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300005168\|Ga0066809_10195369	Not Available	545	Open in IMG/M
3300005327\|Ga0070658_11994686	Not Available	501	Open in IMG/M
3300005328\|Ga0070676_10173975	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300005335\|Ga0070666_10858971	Not Available	670	Open in IMG/M
3300005344\|Ga0070661_100675823	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300005345\|Ga0070692_10023675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3011	Open in IMG/M
3300005347\|Ga0070668_101002797	Not Available	750	Open in IMG/M
3300005367\|Ga0070667_100036523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4119	Open in IMG/M
3300005440\|Ga0070705_100129496	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300005445\|Ga0070708_101076966	Not Available	753	Open in IMG/M
3300005456\|Ga0070678_101335704	Not Available	668	Open in IMG/M
3300005459\|Ga0068867_100008441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7265	Open in IMG/M
3300005530\|Ga0070679_100627456	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300005545\|Ga0070695_101048418	Not Available	665	Open in IMG/M
3300005546\|Ga0070696_100935528	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005548\|Ga0070665_100120734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2622	Open in IMG/M
3300005548\|Ga0070665_100430278	Not Available	1329	Open in IMG/M
3300005549\|Ga0070704_100068976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	2560	Open in IMG/M
3300005564\|Ga0070664_102244596	Not Available	518	Open in IMG/M
3300005719\|Ga0068861_102133105	Not Available	561	Open in IMG/M
3300005834\|Ga0068851_10106637	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300005843\|Ga0068860_100092695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2878	Open in IMG/M
3300006038\|Ga0075365_10002135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9492	Open in IMG/M
3300006038\|Ga0075365_10090750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2081	Open in IMG/M
3300006038\|Ga0075365_10184677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1458	Open in IMG/M
3300006038\|Ga0075365_10995404	Not Available	591	Open in IMG/M
3300006042\|Ga0075368_10057746	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300006048\|Ga0075363_101052934	Not Available	503	Open in IMG/M
3300006186\|Ga0075369_10261199	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300006353\|Ga0075370_10207046	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300006353\|Ga0075370_11002010	Not Available	512	Open in IMG/M
3300006574\|Ga0074056_11575775	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300006578\|Ga0074059_11590740	Not Available	909	Open in IMG/M
3300006604\|Ga0074060_11940422	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300006606\|Ga0074062_12795965	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300009092\|Ga0105250_10245749	Not Available	764	Open in IMG/M
3300009098\|Ga0105245_10086850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2870	Open in IMG/M
3300009156\|Ga0111538_10387299	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300009174\|Ga0105241_10258438	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300009553\|Ga0105249_12443186	Not Available	595	Open in IMG/M
3300010037\|Ga0126304_11139988	Not Available	534	Open in IMG/M
3300010040\|Ga0126308_10261393	Not Available	1128	Open in IMG/M
3300010371\|Ga0134125_10897758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	973	Open in IMG/M
3300010373\|Ga0134128_10154675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2592	Open in IMG/M
3300010400\|Ga0134122_11472203	Not Available	698	Open in IMG/M
3300010401\|Ga0134121_10569335	Not Available	1055	Open in IMG/M
3300011107\|Ga0151490_1188477	Not Available	532	Open in IMG/M
3300012212\|Ga0150985_108126254	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300012469\|Ga0150984_113872843	Not Available	1060	Open in IMG/M
3300012885\|Ga0157287_1041535	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300012916\|Ga0157310_10575859	Not Available	504	Open in IMG/M
3300012957\|Ga0164303_10961802	Not Available	604	Open in IMG/M
3300012958\|Ga0164299_10004615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	4567	Open in IMG/M
3300012960\|Ga0164301_10137889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1471	Open in IMG/M
3300012960\|Ga0164301_11907743	Not Available	502	Open in IMG/M
3300012985\|Ga0164308_10222379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1454	Open in IMG/M
3300012986\|Ga0164304_10228364	Not Available	1234	Open in IMG/M
3300012988\|Ga0164306_10907718	Not Available	718	Open in IMG/M
3300012989\|Ga0164305_10339080	Not Available	1127	Open in IMG/M
3300013096\|Ga0157307_1019428	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300013102\|Ga0157371_10531073	Not Available	871	Open in IMG/M
3300013297\|Ga0157378_10073039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3083	Open in IMG/M
3300013308\|Ga0157375_11970390	Not Available	694	Open in IMG/M
3300014326\|Ga0157380_10577556	Not Available	1108	Open in IMG/M
3300014968\|Ga0157379_10735830	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300014969\|Ga0157376_10043916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3671	Open in IMG/M
3300015077\|Ga0173483_10490048	Not Available	653	Open in IMG/M
3300015200\|Ga0173480_10416250	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300015200\|Ga0173480_10483584	Not Available	738	Open in IMG/M
3300015200\|Ga0173480_11070371	Not Available	536	Open in IMG/M
3300015371\|Ga0132258_11185700	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300015374\|Ga0132255_100788549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1416	Open in IMG/M
3300017965\|Ga0190266_10030187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1715	Open in IMG/M
3300018066\|Ga0184617_1032908	Not Available	1239	Open in IMG/M
3300018072\|Ga0184635_10276399	Not Available	662	Open in IMG/M
3300018073\|Ga0184624_10288700	Not Available	735	Open in IMG/M
3300018083\|Ga0184628_10069767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1786	Open in IMG/M
3300018466\|Ga0190268_12165421	Not Available	518	Open in IMG/M
3300018469\|Ga0190270_10003910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	7530	Open in IMG/M
3300018476\|Ga0190274_10051907	All Organisms → cellular organisms → Bacteria	2973	Open in IMG/M
3300018481\|Ga0190271_10263256	All Organisms → cellular organisms → Bacteria	1765	Open in IMG/M
3300018920\|Ga0190273_10767583	Not Available	759	Open in IMG/M
3300019356\|Ga0173481_10104142	Not Available	1097	Open in IMG/M
3300021082\|Ga0210380_10011800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3653	Open in IMG/M
3300025321\|Ga0207656_10575216	Not Available	575	Open in IMG/M
3300025905\|Ga0207685_10116727	All Organisms → cellular organisms → Bacteria → Acidobacteria	1165	Open in IMG/M
3300025914\|Ga0207671_10372595	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300025919\|Ga0207657_10061703	All Organisms → cellular organisms → Bacteria	3212	Open in IMG/M
3300025924\|Ga0207694_10073605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2673	Open in IMG/M
3300025930\|Ga0207701_10822302	Not Available	781	Open in IMG/M
3300025932\|Ga0207690_11453119	Not Available	573	Open in IMG/M
3300025941\|Ga0207711_10058893	All Organisms → cellular organisms → Bacteria	3306	Open in IMG/M
3300025942\|Ga0207689_10486220	Not Available	1034	Open in IMG/M
3300025945\|Ga0207679_11497456	Not Available	619	Open in IMG/M
3300026116\|Ga0207674_10026235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	6194	Open in IMG/M
3300026121\|Ga0207683_11135340	Not Available	725	Open in IMG/M
3300026891\|Ga0208889_1013175	Not Available	512	Open in IMG/M
3300027560\|Ga0207981_1089937	Not Available	565	Open in IMG/M
3300027866\|Ga0209813_10024149	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300028716\|Ga0307311_10081177	Not Available	891	Open in IMG/M
3300028744\|Ga0307318_10345355	Not Available	524	Open in IMG/M
3300028754\|Ga0307297_10000570	All Organisms → cellular organisms → Bacteria → Proteobacteria	8799	Open in IMG/M
3300028755\|Ga0307316_10138732	Not Available	863	Open in IMG/M
3300028802\|Ga0307503_10000289	All Organisms → cellular organisms → Bacteria → Proteobacteria	11177	Open in IMG/M
3300028810\|Ga0307294_10186500	Not Available	710	Open in IMG/M
3300028819\|Ga0307296_10644833	Not Available	579	Open in IMG/M
3300028875\|Ga0307289_10466745	Not Available	519	Open in IMG/M
3300028889\|Ga0247827_10477981	Not Available	775	Open in IMG/M
3300031152\|Ga0307501_10124238	Not Available	677	Open in IMG/M
3300031170\|Ga0307498_10061038	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300031198\|Ga0307500_10008011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2162	Open in IMG/M
3300031198\|Ga0307500_10135196	Not Available	692	Open in IMG/M
3300031226\|Ga0307497_10074762	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300032205\|Ga0307472_101879122	Not Available	597	Open in IMG/M
3300033550\|Ga0247829_10222282	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300034354\|Ga0364943_0198713	Not Available	737	Open in IMG/M
3300034417\|Ga0364941_105843	Not Available	681	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.80%
Host-Associated	Host-Associated	39.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.80%
Plants	Host-Associated → Plants	39.20%
Aquatic	Environmental → Aquatic	4.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.60%
Roots	Host-Associated → Plants → Roots	8.00%
Sediment	Environmental → Aquatic → Sediment	3.20%
Floodplain	Environmental → Terrestrial → Floodplain	1.60%
Freshwater	Environmental → Aquatic → Freshwater	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.40%
Loam	Environmental → Terrestrial → Soil → Loam	8.00%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	8.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.40%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.60%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.40%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	8.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.60%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.60%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	28.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.60%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	8.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.20%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.40%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.60%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.80%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005104	Soil and rhizosphere microbial communities from Laval, Canada - mgHAC	Environmental	Open in IMG/M
3300005159	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026891	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1191985482	3300002568	Soil	MSKQTWSQDTIGRGAAVVLLAAAMLVPTGAGAHPIDGGSTRGAAHQINSFGMPDEGPQVEELDPTDDGFIIIECVGFAGLAALNAREPQGGFRMRAVAVPQFPLGPSTCSVQEHKRA*
C688J35102_1200613082	3300002568	Soil	MSKQTWSQNTIGCGAAAVLLAAAMLVPTAAGAHPIGDSFNRGAAHQVVSFGSPDEGPRVEELDPTDDGFIIIECIGFAGRAAPNARGPQGGFWMQTVAVPQFPLGPSACSPQEHKRG*
Ga0062593_1005466351	3300004114	Soil	MSTQRGSQGAIGWGAAAVMLAAAILVSTAAGAHPIGDSSARDASHQTVRFGISEEGPQVEELDPTDDGFIIIECVGFAGRPPLDASESQRGLWMQTVAVPQFPLGPSTCSPQEHKRA*
Ga0062594_1034149881	3300005093	Soil	KQTWSQDTIGRAAGAVLLAAAMLVPTGTGAHPLDGGSARGAAHQINSFGIPDEGPQVEELDPTDDGFIIIECVGFVGPAALNAREPHAAFWMRTVAVPQFPLGPSTCSPQEHKRA*
Ga0066818_10069552	3300005104	Soil	MSKQTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0066808_10158862	3300005159	Soil	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0066814_100047692	3300005162	Soil	MSKQTWSQDTIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0066869_100029642	3300005165	Soil	MSEQTWSQDRIGHGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0066809_101953691	3300005168	Soil	MSKQTWSQDTIGSGAAAVLLAAAMLVPTAAGAHPIDGGSTRGAAHQISSFGIPDEGPQVEELDPTDDGFIIIECVGFGEPAALNAREPYGGFSMQTVAVPQFPLGPSTCSLQEHKRA*
Ga0070658_119946861	3300005327	Corn Rhizosphere	MSEQTWSQDRIGRGVAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGVAGLVALHAREPQGGFWMQTVAVPQFPLGPSTCSPQEHKRA*
Ga0070676_101739751	3300005328	Miscanthus Rhizosphere	EQVMSKQTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0070666_108589711	3300005335	Switchgrass Rhizosphere	MSEQTWSQDRIGRVAAPVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0070661_1006758231	3300005344	Corn Rhizosphere	AAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0070692_100236752	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQTWSQDRIGHGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA*
Ga0070668_1010027972	3300005347	Switchgrass Rhizosphere	MSKQTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA*
Ga0070667_1000365231	3300005367	Switchgrass Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPS
Ga0070705_1001294961	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECVGFVGSAALNAREPHAAFWMRAVAVPQFPLGPSACSPQEHKRA*
Ga0070708_1010769661	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQTWSQDRIGRVAAPVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEH
Ga0070678_1013357041	3300005456	Miscanthus Rhizosphere	MSTQRGSQGAIGWGAAAVMLAAAILVSTAAGAHPIGDSSARDASHQTVRFGISEEGPQVEELDPTDDGFIIIECVGFAGRPPLDASESQRGLWMQTVAVPQFPLGPSTCSPQ
Ga0068867_1000084413	3300005459	Miscanthus Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGLAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0070679_1006274561	3300005530	Corn Rhizosphere	MSTQRGSQGAIGWGAAAVMLAAAILVSTAAGAHPIGDSSARDASHQTVRFGISEEGPQVEELDPTDDGFIIIECVGFVGSAALNAREPHAAFWMRAVAVPQFPLGPSTCSPQEHKRA*
Ga0070695_1010484181	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVP
Ga0070696_1009355283	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0070665_1001207343	3300005548	Switchgrass Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPS
Ga0070665_1004302782	3300005548	Switchgrass Rhizosphere	MSKQTWSQDTIGRAAGAVLLAAAMLVPTGTGAHPLDGGSARGAAHQINSFGIPDEGPQVEELDPTDDGFIIIECVGFVGPAALNAREPHAAFWMRTVAVPQFPLGPSTCSPQEHKRA*
Ga0070704_1000689763	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	EQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0070664_1022445962	3300005564	Corn Rhizosphere	MSTQRGSQGAIGWGAAAVMLAAAILVSTAAGAHPIGDSSARDASHQTVRFGISEEGPQVEELDPTDDGFIIIECVGFAGRPPLDASESQRGLWMQTGSRTAVPAWSFDVLAPRA*
Ga0068861_1021331052	3300005719	Switchgrass Rhizosphere	GWGAAAVMLAAAILVSTAAGAHPIGDSSARDASHQTVRFGISEEGPQVEELDPTDDGFIIIECVGFAGRPPLDASESQRGLWMQTVAVPQFPLGPSTCSPQEHKRA*
Ga0068851_101066373	3300005834	Corn Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECVGFVGSAALNAREPHAAFWMRAVAVPQFPLGPSTCSPQEHKRA*
Ga0068860_1000926954	3300005843	Switchgrass Rhizosphere	VLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0075365_1000213513	3300006038	Populus Endosphere	MREQPWSQESVTRGAAAALLAAAMLVPTAGGAHPMGDHPAPSVAHQIVTFGYPNEGPKVDELDPTDDGYIIIECVGFAGPAAVGTNGPPLGMWTHSVAVPQFPLGPSHCSPKEHGPA*
Ga0075365_100907503	3300006038	Populus Endosphere	MGTVMSKQTWSQDTIGRGAGAVLLAAAMLVPSGAGAYPIDGGSARGAAHQISSFGIPDEGPQVEELDPTDDGFIIIECVGFVGPAALNAREPHGAFRMRTVAMPQFPLGPSTCWPQEHKRA*
Ga0075365_101846772	3300006038	Populus Endosphere	MSKQTWSQDTIGRAAGAVLLAAAMLVPTGTGAHPLDGGSAHQINSFGIPDEGPQVEELDPTDDGFIIIECVGFVGPAALNAREPHAAFWMRTVAVPQFPLGPSTCSPQEHKRA*
Ga0075365_109954041	3300006038	Populus Endosphere	GRGAAVVWLAAAMLIPTAAGAHPIGDSSNHGAALQVVSFGSPDEGPRVEELDPTDDGFIIIECIGFAGRAAPNARGPQGGFWMQTVAVPQFPLGPSACSPQEHKRA*
Ga0075368_100577462	3300006042	Populus Endosphere	MSKQTWSQDTIGRAAGAVLLAAAMLVPTGTGAHPLDGGSAHQINSFGIPDEGPQVEELDPTDDGFIIIECVGFVGSAALNAREPHAAFWMRAVAVPQFPLGPSTCSPQEHKRA*
Ga0075363_1010529341	3300006048	Populus Endosphere	VMSKQTWSQDTIGRGAAVVWLAAAMLIPTAAGAHPIGDSSNHGAALQVVSFGSPDEGPRVEELDPTDDGFIIIECIGFAGRAAPNARGPQGGFWMQTVAVPQFPLGPSACSPQEHKRA*
Ga0075369_102611992	3300006186	Populus Endosphere	VMSKQTWSQDTIGRGAGAVLLAAAMLVPTGAGAYLLDGGSARGVAHQINSFGMPDEGPQVEELDPTDDGFIIIECVGFVGPAALNAREPHAAFWMRTVAVPQFPLGPSTCSPQEHKRA*
Ga0075370_102070461	3300006353	Populus Endosphere	MSKQTWSQDTIGRGAGAVLLAAAMLVPSGAGAYPIDGGSARGAAHQISSFGIPDEGPQVEELDPTDDGFIIIECVGFVGSAALNAREPHAAFWMRAVAVPQFPLGPSTCSPQEHKRA*
Ga0075370_110020101	3300006353	Populus Endosphere	MCTQSGSQGAIGWGVASVLLAAAILVSTAAGAHPIGDSSARDPSHQTVRLGISEEGPRVEELDPTDDGFIIIECVGFADRPVLDGRGSQGDLWMQTVAVPQVPLGPSTCSPQEHK
Ga0074056_115757751	3300006574	Soil	SNQTWSQGIFGCCAAVVLLAAAMLVPTAAGAHPVGDGSARGAAHQVVSFGIPDEGPQVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA*
Ga0074059_115907401	3300006578	Soil	MSEQTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPS
Ga0074060_119404221	3300006604	Soil	QGIFGRGAAVVLLAAAMLVPTAAGAHPVGDGSARGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA*
Ga0074062_127959652	3300006606	Soil	IGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0105250_102457492	3300009092	Switchgrass Rhizosphere	MSKHTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0105245_100868503	3300009098	Miscanthus Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGVIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0111538_103872993	3300009156	Populus Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPHAAFWMRAVAVPQFPLGPSTCSPQEHKRA*
Ga0105241_102584382	3300009174	Corn Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSTCSPQEHKRA*
Ga0105249_124431861	3300009553	Switchgrass Rhizosphere	GSQGAIGWGAAAVMLAAAILVSTAAGAHPIGDSSARDASHQTVRFGISEEGPQVEELDPTDDGFIIIECVGFAGRPPLDASESQRGLWMQTVAVPQFPLGPSTCSPQEHKRA*
Ga0126304_111399881	3300010037	Serpentine Soil	MSRQTWTQDTIRRGAAAVLLAAAMLVPTAAGAHPIGDSSTRGAVHQVVSFGSPDEGPRVEELDPTDDGFIIIECIGFAGRAALNARGPQGGLWMQTVAVPQFPLGPSACSPQEHKRA*
Ga0126308_102613932	3300010040	Serpentine Soil	MSKQTWSQDTIGRGAAAVLLAAAMLVPTGAGAHPIDGGSTRGAAHQISSFGIPDEGPQVEELDPTDDGFIIIECIGFAVPAALNAREPKAGFWMQTVAVPQFPLGPSACSPQEHKRA*
Ga0134125_108977581	3300010371	Terrestrial Soil	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSTCSPQEYKRA*
Ga0134128_101546752	3300010373	Terrestrial Soil	MSEQTWSQNRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0134122_114722031	3300010400	Terrestrial Soil	MSEQTWSQDRIGHGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGVAGLVALHAREPQGGFWMQTAAVPQFPLGPSACSPQE
Ga0134121_105693351	3300010401	Terrestrial Soil	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGVAGLVALHAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA*
Ga0151490_11884771	3300011107	Soil	MSNQTWSQGIFGCCAAVVLLAAAMLVPTAAGAHPVGDGSARGAAHQVVSFGIPDEGPQVEELDPTDDGFIIIECIGVAGLVALHAREPQGGFWMQTVAVPRFPLGPSTCSPQEHKRA*
Ga0150985_1081262541	3300012212	Avena Fatua Rhizosphere	MSKQTWSQDTIGRGAAAVLLVAAMLVPTAAGAQPIGDSSTRGAAHQVVSFGSPDEGPRVEELDPTDDGFIIIECIGFAGPAALNARGPQGGFWMLTVAVPQFPLGPSACSPQEHKRA*
Ga0150984_1138728432	3300012469	Avena Fatua Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGSPDEGPRVEELDPTDDGFIIIECIGFAGSAALNARESQGGFWMQTVAVPQFPLGPSACSPQEHKRA*
Ga0157287_10415351	3300012885	Soil	LLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0157310_105758591	3300012916	Soil	MSKQTWSQDTIGRAAGAVLLAAAMLVPTGTGAHPLDGGSAHQINSFGIPDEGPQVEELDPTDDGFIIIECVGFVGSAALNAREPHAAFWMRAVAVPQFPLGPSACSPQEHKRA*
Ga0164303_109618021	3300012957	Soil	QRGSQGAIGWGAAAVMLAAAILVSTAAGAHPIGDSSARDASHQTVRLGISEEGPQVEELDPTDDGFIIIECVGFAGRPPLDASESQRGLWMQTVAVPQFPLGPSTCSPQEHKRA*
Ga0164299_100046156	3300012958	Soil	VVLLAAAMLVPTAAGAHPVGDGSARGAAHQVVSFGIPDEGPQVEELDPTDDGFIIIECIGVAGLVALHAREPQGGFWMQTVAVPQFPLGPSTCSPQEHKRA*
Ga0164301_101378892	3300012960	Soil	MSNQTWSQGIFGRGAAVVLLAAAMLVPTAAGAHPVGDGSARGAAHQVVSFGIPDEGPQVEELDPTGDGFIIIECIGVAGLVALHAREPQGGFWMQTAAVPQFPLGPSTCSPQEHKRA*
Ga0164301_119077431	3300012960	Soil	MSKQTWSQATIGRGAAAVLLTAAMLVPTAAGAHPIGDSATRDAAHQVVSFGTPDEGPRVEELDPTDDGFIIIECIGFAGPAARNAREPQGGFLIQLIQTVAVPQFPLGPSVCSPQEHKRA
Ga0164308_102223791	3300012985	Soil	MSNQTWSQGIFGRGAAVVLLAAAMLVPTAAGAHPVGDGSARGAAHQVVSFGIPDEGPQVEELDPTDDGFIIIECIGVAGLVALHAREPQGGFWMQTAAVPQFPLGPSACSPQEHKRA*
Ga0164304_102283642	3300012986	Soil	MSNQTWSQGIFGRGAAVVLLAAAMLVPTAAGAHPVGDGSARGAAHQVVSFGIPDEGPQVEELDPTDDGFIIIECIGVAGLVALHAREPQGGFWMQTAAVPQFPLGPSTCSP
Ga0164306_109077181	3300012988	Soil	VVLLAAAMLVPTAAGAHPVGDGSARGAAHQVVSFGIPDEGPQVEELDPTDDGFIIIECIGVAGLVALHAREPQGGFWMQTAAVPQFPLGPSACSPQEHKRA*
Ga0164305_103390801	3300012989	Soil	MSNQTWSQGIFGRGAAVVLLAAAMLVPTAAGAHPVGDGSARGAAHQVVSFGIPDEGPQVEELDPTGDGFIIIECIGVAGLVALHAREPQGGFWMQTAAVPQFPLGPSACSPQEHKRA*
Ga0157307_10194281	3300013096	Soil	MSKQTWSQDTIGRAAGAVLLAAAMLVPTGTGAHPLDGGSAHQINSFGIPDEGPQVEELDPTDDGFIIIECVGFVGPAALNAREPHAAFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0157371_105310731	3300013102	Corn Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIECSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0157378_100730391	3300013297	Miscanthus Rhizosphere	GAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0157375_119703901	3300013308	Miscanthus Rhizosphere	MSKQTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSARDASHQTVRFGISEEGPQVEELDPTDDGFIIIECVGFAGRPPLDASESQRGLWMQTVAVPQFPLGPSTCSPQEHKRA*
Ga0157380_105775562	3300014326	Switchgrass Rhizosphere	MSKQTWSQNTIGCGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0157379_107358301	3300014968	Switchgrass Rhizosphere	MSTQRGSQGAIGWGAAAVMLAAAILVSTAAGAHPIGDSSARDASHQTVRFGISEEGPQVEELDPTDDGFIIIECVGFAGLAALNAREPQGGFRMRAVAVPQFPLGPSTCSPQEHKRA*
Ga0157376_100439163	3300014969	Miscanthus Rhizosphere	MSEQTWSQDRIGRVAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0173483_104900481	3300015077	Soil	MSKQTWSQDTIGRAAGAVLLAAAMLVPTGTGAHPLDGGSAHQINSFGIPDEGPQVEELDPTDDGFIIIECVGFVGPAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0173480_104162502	3300015200	Soil	MSEQTWSQDRIGHGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVDELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA*
Ga0173480_104835841	3300015200	Soil	MSKQTWSQDTIGRAAGAVLLAAAMLVPTGTGAHPLDGGSAHQINSFGIPDEGPQVEELDPTDDGFIIIECVGFVGSAALNAREPHAAFWMRAVAVPQFPLGPSTCSP
Ga0173480_110703711	3300015200	Soil	MSTQRGSQGAIGWGAAAVMLAAAILVSTAAGAHPIGDSSARDASHQTVRFGISEEGPQVEELDPTDDGFIIIECVGFAGRPPLDASESQRGLWMQTV
Ga0132258_111857002	3300015371	Arabidopsis Rhizosphere	MSKQTWSQDTIGRAAGAVLLAAAMLVPTGTGAHPLDGGSAHQINSFGIPDEGPQVEELDPTVDGFIIIECVGFVGPAALNAREPHAAFWMRTVAVPQFPLGPSTCSPQEHKRA*
Ga0132255_1007885493	3300015374	Arabidopsis Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSTCSPQEHKRA*
Ga0190266_100301872	3300017965	Soil	MSKQTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGSPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0184617_10329081	3300018066	Groundwater Sediment	MSKQTWSQNTIGCGAAAVLLAAAMLVPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGHSTCSTQEHKRA
Ga0184635_102763991	3300018072	Groundwater Sediment	MSKQTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0184624_102887002	3300018073	Groundwater Sediment	MSKQTWSQNTIGCGAAAVLLAAAMLVPTAAGAHPIGDSFNRGAAHQVVSFGSPDEGPRVEELDPTDDGFIIIECIGFAGRAAPNARGPQGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0184628_100697672	3300018083	Groundwater Sediment	MSKQTWSQDTIGRGAAAVLLAAAMLLPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0190268_121654211	3300018466	Soil	MSKQTWSQYSIRSGAAGVLLAAAMLVPTGAGAHPIDGGSTRGAAHQINSFGIPDEGPQVEELDPTDDGFIIIECVGFAGLAALNAREPQGGSRMRAVAVPQFPLGPSTCSPQEHKRA
Ga0190270_100039105	3300018469	Soil	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0190274_100519072	3300018476	Soil	MSKQTWSQDTIGRGAAAVLLTAAMLVPTGAAAHPIDGGSTRGAAHQISSFGIPDEGPQVEELDPTDDGFIIIECIGFAGRAALNARGPQGAFWIQTVTVPQFPLGPSACSPQEHKRA
Ga0190271_102632562	3300018481	Soil	VLQVEQVMSKQTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0190273_107675832	3300018920	Soil	MSKQTWSQDTIGRGAAAVLLTAAMLVPTGAGAHPIDGGSTRGAAHQISSFGIPDEGPQVEELDPTDDGFIIIECIGFAVPAALNAREPKGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0173481_101041422	3300019356	Soil	MSEQTWSQDRIGHGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA
Ga0210380_100118001	3300021082	Groundwater Sediment	MSKQTWSQNTIGCGAAAVLLAAAMLVPTAAGAHPIGDSFNRGAAHQVVSFGSPDEGPRVEELDPTDDGFIIIECIGFAGRAAPNARGPQGGFWMQTVAVPQFPLG
Ga0207656_105752161	3300025321	Corn Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECVGFVGPAALNAREPHAAFWMRTVAVPQFPLGPSTCSPQEHKRA
Ga0207685_101167272	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQTWSQDRIGHGAAAVLPAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA
Ga0207671_103725951	3300025914	Corn Rhizosphere	MSEQTWSQDGIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA
Ga0207657_100617033	3300025919	Corn Rhizosphere	MSEQTWSQDRIGRVAAPVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0207694_100736052	3300025924	Corn Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPPEHKRA
Ga0207701_108223022	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGLAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA
Ga0207690_114531192	3300025932	Corn Rhizosphere	MSTQTWPQGTIGRGAAAALLAAAMLFPTGVGAHPIGNSSARGASHQILRFESSEEGPRVEESDPTDDGFIIIECIAFAGSTALDASESQRGLWMQTVAVPQFPLGPSTCSPQEHKRA
Ga0207711_100588933	3300025941	Switchgrass Rhizosphere	MSEQTWSQDRIGRVAAPVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGLAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA
Ga0207689_104862201	3300025942	Miscanthus Rhizosphere	MSKQTWSQDTIGRAAGAVLLAAAMLVPTGTGAHPLDGGSARGAAHQINSFGIPDEGPQVEELDPTDDGFIIIECVGFVGPAALNAREPHAAFWMRTVAVPQFPLGPSTCSPQEHKRA
Ga0207679_114974561	3300025945	Corn Rhizosphere	MSTQRGSQGAIGWGAAAVMLAAAILVSTAAGAHPIGDSSARDASHQTVRFGISEEGPQVEELDPTDDGFIIIECVGFAGRPPLDASESQRGLWMQTGSRTAVPAWSFDVLAPRA
Ga0207674_100262352	3300026116	Corn Rhizosphere	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECVGFAGLAALNAREPQGGFRMRAVAVPQFPLGPSACSPQEHKRA
Ga0207683_111353401	3300026121	Miscanthus Rhizosphere	MSTQRGSQGAIGWGAAAVMLAAAILVSTAAGAHPIGDSSARDASHQTVRFGISEEGPQVEELDPTDDGFIIIECVGFAGRPPLDASESQRGLWMQTVAVPQFPLGPSTCSPQEHKR
Ga0208889_10131751	3300026891	Soil	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHK
Ga0207981_10899371	3300027560	Soil	MSKQTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGLAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA
Ga0209813_100241491	3300027866	Populus Endosphere	MSKQTWSQDTIGRAAGAVLLAAAMLVPTGTGAHPLDGGSAHQINSFGIPDEGPQVEELDPTDDGFIIIECVGFVGSAALNAREPHAAFWMRAVAVPQFPLGPSTCSPQEHKRA
Ga0307311_100811772	3300028716	Soil	MSKQTWSQNTIGCGAAAVLLAAAMLVPTAAGAHPIGDSFNRGAAHQVASFGSPDEGPRVEELDPTDDGFIIIECIGFAGRAAPNARGPQGGFWMQ
Ga0307318_103453551	3300028744	Soil	MSKQTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNSREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0307297_100005703	3300028754	Soil	MSKQTWSQNTIGCGAAAVLLAAAMLVPTAAGAHPIGDSFNRGAAHQVVSFGSPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0307316_101387321	3300028755	Soil	MSKQTWSQDTIGRGAAAVLLTAAMLVPTGAAAHPIDGGSTRGAAHQISSFGIPDEGPQVEELDPTDDGFIIIECIGFAVPAALNAREPKGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0307503_1000028911	3300028802	Soil	MSKQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0307294_101865002	3300028810	Soil	MSKQTWSQDTIGRGAAAVLLTAAMLVPTGAAAHPIDGGSTRGAAHQISSFGIPDEGPQVEELDPTDDGFIIIECIGFAVPAALNAREPKAGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0307296_106448332	3300028819	Soil	MSKQTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPQVEELDPTDDGFIIIECIGFAVPAALNAREPKGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0307289_104667451	3300028875	Soil	MSKQTWSQDTIGRGAAAVLLTAAMLVPTGAAAHPIDGGSTRGAAHQISSFGIPDEGPQVEELDPTDDGFIIIECIGFAVPAALNAREPKGGFWMQTVAVPQFPLGPSACS
Ga0247827_104779811	3300028889	Soil	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGRSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA
Ga0307501_101242381	3300031152	Soil	MSKQTWSQDTIGRGAAVVSLAAAMLVPTGAGAHPIDGGSTRGAAHQINSFGMPDEGPQVEELDPTDDGFIIIECVGFAGLAALNAREPQGGFRMRAVAVPQFPLGPSTCSAQEHKRA
Ga0307498_100610381	3300031170	Soil	RGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0307500_100080113	3300031198	Soil	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAV
Ga0307500_101351962	3300031198	Soil	MSKQTWSQDTIGRGAAEVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0307497_100747622	3300031226	Soil	MSKQTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPQGGFWMRTVAVPQFPLGPSACSPQEHKRA
Ga0307472_1018791222	3300032205	Hardwood Forest Soil	TWSQGIFGRGAAVVLLAAAMLVPTAAGAHPVGDGSARGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGAALNAREPLGGFWMRTVAVPQFPLGPSACSPQEHKRA
Ga0247829_102222821	3300033550	Soil	MSEQTWSQDRIGRGAAAVLLAAAMLIPTAAGAQPIEGSSTRGAAHQVVSFGIPDEGPQVEELDPTDDGFIIIECIGFAGRAAPNARGPQGGFWMQTVAVPQFPLGPSTCSPQEHKRA
Ga0364943_0198713_242_595	3300034354	Sediment	MSKQTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVLSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQTVAVPQFPLGPSACSPQEHKRA
Ga0364941_105843_396_680	3300034417	Sediment	MSKQTWSQDTIGRGAAAVLLAAAMLLPTAAGAHPIGDSSTRGAAHQVVSFGIPDEGPRVEELDPTDDGFIIIECIGFAGPAALNAREPQGGFWMQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067918

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign