Metagenome / Metatranscriptome Family F067967

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067967
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	46 residues
Representative Sequence	VFLVRFEVLRQLTNAFAQQSDLDFWTARIGGMRAVLVNEGFLLLSG
Number of Associated Samples	106
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.40 %
% of genes near scaffold ends (potentially truncated)	82.40 %
% of genes from short scaffolds (< 2000 bps)	84.00 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.200 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.600 % of family members)
Environment Ontology (ENVO)	Unclassified (30.400 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.200 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.46% β-sheet: 0.00% Coil/Unstructured: 40.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13240	zinc_ribbon_2	6.40
PF13248	zf-ribbon_3	4.00
PF01138	RNase_PH	2.40
PF00588	SpoU_methylase	2.40
PF01797	Y1_Tnp	2.40
PF00891	Methyltransf_2	1.60
PF11645	PDDEXK_5	1.60
PF00474	SSF	1.60
PF08238	Sel1	0.80
PF01541	GIY-YIG	0.80
PF13847	Methyltransf_31	0.80
PF00583	Acetyltransf_1	0.80
PF08445	FR47	0.80
PF08281	Sigma70_r4_2	0.80
PF03726	PNPase	0.80
PF02837	Glyco_hydro_2_N	0.80
PF10978	DUF2785	0.80
PF00486	Trans_reg_C	0.80
PF08818	DUF1801	0.80
PF00665	rve	0.80
PF13429	TPR_15	0.80
PF14559	TPR_19	0.80
PF12848	ABC_tran_Xtn	0.80
PF13744	HTH_37	0.80
PF00005	ABC_tran	0.80
PF16640	Big_3_5	0.80
PF08681	DUF1778	0.80
PF07589	PEP-CTERM	0.80
PF13560	HTH_31	0.80
PF01053	Cys_Met_Meta_PP	0.80
PF07676	PD40	0.80
PF02687	FtsX	0.80
PF05973	Gp49	0.80
PF07927	HicA_toxin	0.80
PF02874	ATP-synt_ab_N	0.80
PF03747	ADP_ribosyl_GH	0.80
PF00782	DSPc	0.80
PF12867	DinB_2	0.80
PF00312	Ribosomal_S15	0.80
PF07366	SnoaL	0.80
PF13365	Trypsin_2	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	3.20
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	2.40
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	2.40
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	2.40
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	2.40
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	2.40
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	2.40
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.80
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.80
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.80
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	0.80
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.80
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.80
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.80
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.80
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.80
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.80
COG0184	Ribosomal protein S15P/S13E	Translation, ribosomal structure and biogenesis [J]	0.80
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.80
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.80
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.80
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.80
COG1397	ADP-ribosylglycohydrolase	Posttranslational modification, protein turnover, chaperones [O]	0.80
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.80
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.80
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.80
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.80
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.80
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.80
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.80
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.80
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.20 %
Unclassified	root	N/A	28.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.20 %
Unclassified	root	N/A	28.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.20 %
Unclassified	root	N/A	28.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	44.80 %
Unclassified	root	N/A	28.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	21.60 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.60 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.00 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.60 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.80 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.60 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.40 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.60 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.80 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.80 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.60 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.20 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.60 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.80 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.80 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.80 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.80 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.60 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.60 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.80 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.80 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.80 %
Janthinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	0.80 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.80 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.80 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.80 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.60 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	1.60 %
unclassified Janthinobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium	0.80 %
Silvibacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium dinghuense	0.80 %
unclassified Bacteroidales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales	0.80 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.80 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.80 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.80 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.80 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.60 %
Hyphomicrobium sp. MC1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. MC1	1.60 %
Janthinobacterium sp. PC23-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium → Janthinobacterium sp. PC23-8	0.80 %
Bacteroidales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	0.80 %
Silvibacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium dinghuense	0.80 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.80 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.80 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.80 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.80 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002915\|JGI25387J43893_1069924	Not Available	521	Open in IMG/M
3300004080\|Ga0062385_10134976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1252	Open in IMG/M
3300004156\|Ga0062589_101593677	Not Available	646	Open in IMG/M
3300004633\|Ga0066395_10856443	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300004633\|Ga0066395_10900049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. MC1	536	Open in IMG/M
3300004800\|Ga0058861_10133761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. MC1	508	Open in IMG/M
3300005174\|Ga0066680_10058520	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2282	Open in IMG/M
3300005175\|Ga0066673_10140284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1337	Open in IMG/M
3300005180\|Ga0066685_10617636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300005187\|Ga0066675_10418299	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300005293\|Ga0065715_11178538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300005332\|Ga0066388_101016006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1391	Open in IMG/M
3300005332\|Ga0066388_102763239	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300005332\|Ga0066388_107896296	Not Available	532	Open in IMG/M
3300005335\|Ga0070666_10238516	All Organisms → cellular organisms → Bacteria → Proteobacteria	1285	Open in IMG/M
3300005338\|Ga0068868_100207563	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300005434\|Ga0070709_10814654	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300005435\|Ga0070714_100570766	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300005435\|Ga0070714_100909671	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300005436\|Ga0070713_100626099	Not Available	1023	Open in IMG/M
3300005518\|Ga0070699_100963971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300005518\|Ga0070699_102118039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300005554\|Ga0066661_10299155	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300005578\|Ga0068854_100283203	All Organisms → cellular organisms → Bacteria → Acidobacteria	1335	Open in IMG/M
3300005586\|Ga0066691_10059338	Not Available	2071	Open in IMG/M
3300005587\|Ga0066654_10726696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300005614\|Ga0068856_100002925	All Organisms → cellular organisms → Bacteria	17486	Open in IMG/M
3300005843\|Ga0068860_100246074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1740	Open in IMG/M
3300005904\|Ga0075280_10144741	Not Available	509	Open in IMG/M
3300006034\|Ga0066656_10571881	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300006162\|Ga0075030_100051180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3449	Open in IMG/M
3300006162\|Ga0075030_100488165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	980	Open in IMG/M
3300006175\|Ga0070712_101472642	Not Available	595	Open in IMG/M
3300006237\|Ga0097621_100600126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
3300006794\|Ga0066658_10686210	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300006804\|Ga0079221_10139167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1253	Open in IMG/M
3300006806\|Ga0079220_11967147	Not Available	520	Open in IMG/M
3300006806\|Ga0079220_12017717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300009093\|Ga0105240_10302075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1831	Open in IMG/M
3300009174\|Ga0105241_10518569	All Organisms → cellular organisms → Bacteria → Acidobacteria	1065	Open in IMG/M
3300009176\|Ga0105242_12799815	Not Available	538	Open in IMG/M
3300009177\|Ga0105248_10127239	All Organisms → cellular organisms → Bacteria	2874	Open in IMG/M
3300009545\|Ga0105237_10027956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5747	Open in IMG/M
3300009545\|Ga0105237_10306376	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300009551\|Ga0105238_10069057	All Organisms → cellular organisms → Bacteria	3534	Open in IMG/M
3300009553\|Ga0105249_12011684	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300009672\|Ga0116215_1303456	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300009826\|Ga0123355_10257373	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2447	Open in IMG/M
3300009826\|Ga0123355_10324521	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300009826\|Ga0123355_11220638	Not Available	765	Open in IMG/M
3300010043\|Ga0126380_10213826	All Organisms → cellular organisms → Bacteria → Acidobacteria	1302	Open in IMG/M
3300010048\|Ga0126373_10033778	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4446	Open in IMG/M
3300010048\|Ga0126373_10911410	Not Available	943	Open in IMG/M
3300010048\|Ga0126373_11620066	Not Available	712	Open in IMG/M
3300010049\|Ga0123356_11433443	Not Available	850	Open in IMG/M
3300010323\|Ga0134086_10346761	Not Available	586	Open in IMG/M
3300010358\|Ga0126370_11683386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	610	Open in IMG/M
3300010360\|Ga0126372_11673818	Not Available	677	Open in IMG/M
3300010360\|Ga0126372_12774029	Not Available	542	Open in IMG/M
3300010366\|Ga0126379_11213583	Not Available	860	Open in IMG/M
3300010375\|Ga0105239_13438278	Not Available	515	Open in IMG/M
3300010376\|Ga0126381_101583965	Not Available	946	Open in IMG/M
3300010376\|Ga0126381_102610374	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300010376\|Ga0126381_104220122	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300010396\|Ga0134126_10254375	All Organisms → cellular organisms → Bacteria → Acidobacteria	2076	Open in IMG/M
3300010399\|Ga0134127_12669675	Not Available	579	Open in IMG/M
3300011269\|Ga0137392_10207158	Not Available	1606	Open in IMG/M
3300012096\|Ga0137389_10069326	All Organisms → cellular organisms → Bacteria → Proteobacteria	2722	Open in IMG/M
3300012198\|Ga0137364_10557510	All Organisms → cellular organisms → Bacteria → Acidobacteria	863	Open in IMG/M
3300012199\|Ga0137383_10295895	All Organisms → cellular organisms → Bacteria → Acidobacteria	1185	Open in IMG/M
3300012207\|Ga0137381_10025563	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4720	Open in IMG/M
3300012207\|Ga0137381_10362770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1263	Open in IMG/M
3300012209\|Ga0137379_10020302	All Organisms → cellular organisms → Bacteria → Acidobacteria	6380	Open in IMG/M
3300012211\|Ga0137377_10977813	Not Available	777	Open in IMG/M
3300012353\|Ga0137367_10347217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300012354\|Ga0137366_10757773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300012357\|Ga0137384_10068456	All Organisms → cellular organisms → Bacteria	2947	Open in IMG/M
3300012357\|Ga0137384_10158419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1895	Open in IMG/M
3300012357\|Ga0137384_10832510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300012469\|Ga0150984_118891438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300012532\|Ga0137373_10313783	Not Available	1242	Open in IMG/M
3300012944\|Ga0137410_11590048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300012948\|Ga0126375_10653542	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300012971\|Ga0126369_10116282	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium dinghuense	2454	Open in IMG/M
3300012977\|Ga0134087_10717601	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	532	Open in IMG/M
3300012987\|Ga0164307_10157742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1501	Open in IMG/M
3300013100\|Ga0157373_10178637	All Organisms → cellular organisms → Bacteria → Acidobacteria	1494	Open in IMG/M
3300013296\|Ga0157374_11407060	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300013308\|Ga0157375_12102155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300013832\|Ga0120132_1000915	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4060	Open in IMG/M
3300014497\|Ga0182008_10715755	Not Available	573	Open in IMG/M
3300014968\|Ga0157379_10516374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1108	Open in IMG/M
3300015264\|Ga0137403_10382889	Not Available	1289	Open in IMG/M
3300016357\|Ga0182032_10767702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → unclassified Janthinobacterium → Janthinobacterium sp. PC23-8	813	Open in IMG/M
3300017955\|Ga0187817_10105858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1773	Open in IMG/M
3300018431\|Ga0066655_10199670	All Organisms → cellular organisms → Bacteria → Acidobacteria	1236	Open in IMG/M
3300018468\|Ga0066662_11408466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300018482\|Ga0066669_10624110	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300019361\|Ga0173482_10136871	All Organisms → cellular organisms → Bacteria → Acidobacteria	938	Open in IMG/M
3300020199\|Ga0179592_10372764	Not Available	626	Open in IMG/M
3300020580\|Ga0210403_10079623	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	2639	Open in IMG/M
3300021170\|Ga0210400_10578897	Not Available	926	Open in IMG/M
3300021560\|Ga0126371_10346706	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300022504\|Ga0242642_1059769	Not Available	609	Open in IMG/M
3300025928\|Ga0207700_10762220	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → unclassified Bacteroidales → Bacteroidales bacterium	865	Open in IMG/M
3300025941\|Ga0207711_11675039	Not Available	579	Open in IMG/M
3300026313\|Ga0209761_1249504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300026335\|Ga0209804_1104861	All Organisms → cellular organisms → Bacteria → Acidobacteria	1297	Open in IMG/M
3300026537\|Ga0209157_1069266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1776	Open in IMG/M
3300026809\|Ga0207820_113520	Not Available	606	Open in IMG/M
3300027000\|Ga0207803_1020902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300027576\|Ga0209003_1079149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300027645\|Ga0209117_1034345	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300028381\|Ga0268264_10830333	Not Available	925	Open in IMG/M
3300029903\|Ga0247271_102137	All Organisms → cellular organisms → Bacteria	4579	Open in IMG/M
3300030339\|Ga0311360_11538748	Not Available	519	Open in IMG/M
3300030617\|Ga0311356_10894584	Not Available	836	Open in IMG/M
3300031057\|Ga0170834_112477843	Not Available	687	Open in IMG/M
3300031231\|Ga0170824_103709859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300031231\|Ga0170824_119633366	Not Available	579	Open in IMG/M
3300031573\|Ga0310915_10528210	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300031912\|Ga0306921_12409549	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300032059\|Ga0318533_11275038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300032261\|Ga0306920_100072010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5066	Open in IMG/M
3300034965\|Ga0370497_0202137	Not Available	516	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.80%
Host-Associated	Host-Associated	23.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.60%
Plants	Host-Associated → Plants	19.20%
Aquatic	Environmental → Aquatic	3.20%
Arthropoda	Host-Associated → Arthropoda	3.20%
Human	Host-Associated → Human	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.80%
Digestive System	Host-Associated → Arthropoda → Digestive System	3.20%
Freshwater	Environmental → Aquatic → Freshwater	1.60%
Sediment	Environmental → Aquatic → Sediment	1.60%
Peat	Environmental → Terrestrial → Peat	1.60%
Digestive System	Host-Associated → Human → Digestive System	0.80%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.00%
Loam	Environmental → Terrestrial → Soil → Loam	14.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.00%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	3.20%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.60%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.20%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.80%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.80%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.00%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	3.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.40%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.60%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.80%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.80%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.80%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.80%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005904	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_404	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026809	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 47 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034965	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25387J43893_10699242	3300002915	Grasslands Soil	MIFLVRFEVVRQLTYTFAQQSNLDFRAAGIGGMRSVLIND*
Ga0062385_101349761	3300004080	Bog Forest Soil	EKAAARAVVFLVRLEVLRQLSNAFAQQRDLNFRASGIGCMRTVLVNEGFLLLSG*
Ga0062589_1015936772	3300004156	Soil	RLEVLRQLANSFTQQRNLDFGAAGVGRMRSVSVNEGLLLLSG*
Ga0066395_108564431	3300004633	Tropical Forest Soil	ARAVILLVRFEVFRQMTNALAQQSDLHFRTACVGGMRTVLVDEGFLLLSG*
Ga0066395_109000491	3300004633	Tropical Forest Soil	VFLVRLEVLRQLANPFAEQSDLNFRATGIACMRAVLVNEGFLLLSG*
Ga0058861_101337611	3300004800	Host-Associated	MVFLVRLEVLRQLTNAFAQQSDLDFWTARIGGMRSVLVNEGFLLLSG
Ga0066680_100585201	3300005174	Soil	LADQHEKTPARAVVFLVRLEVLRQVTNALAQKRDLDFWAACVRAMSTVLVNEGLLLLSG*
Ga0066673_101402842	3300005175	Soil	MVFLVHFEVVRQLTNAFAQQSDLDFWTARIGRVRTVLINEGFLLLSG*
Ga0066685_106176363	3300005180	Soil	QATPLADQHEKAAARAVVFLVRLEVLRQLPNPFADQRDLDLRAPGVRNMRTVLVNEGFLLLSG*
Ga0066675_104182991	3300005187	Soil	AVVFLVRLEVLRQLANAFAKQSDLDLGAPGIAGSSPVLVNEGFLLLSG*
Ga0065715_111785381	3300005293	Miscanthus Rhizosphere	MVFLVRFEVLRQLTNAFAQQSDLDFWTARIGGMRSVLVNEGFLLLSG*
Ga0066388_1010160064	3300005332	Tropical Forest Soil	HEKTAARAMVFQVRFEVLRQLTNAFAQQSDLDFWAARIGGMRSVLINDRFLLLSG*
Ga0066388_1027632392	3300005332	Tropical Forest Soil	VFQVRFEVVRQLTNAFAQQSDLDFWAARIGGVRSVLIDDRFLLLSG*
Ga0066388_1078962961	3300005332	Tropical Forest Soil	VRFEVLRQLTNAFAQQSDLDFWTARIGGMRSVLVNEGFLLFSG*
Ga0070666_102385161	3300005335	Switchgrass Rhizosphere	MVLLVRFEVIRQLANALAKQRDLDFGAARIGGMRSVLVDEGFLLLSG*
Ga0068868_1002075632	3300005338	Miscanthus Rhizosphere	MVFLVRLEVLRQLTNAFAQQSDLDFWTARIGGMRSVLVNEGFLLLSG*
Ga0070709_108146542	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LVRLEVLRQLANPFAKQSDLNFRASGVARVGPVLVNEGFLLLSG*
Ga0070714_1005707662	3300005435	Agricultural Soil	MVFLVRFEVLRQLTNAFAQQSDLDFWTARIGGMRSVLINEGFLLLSG*
Ga0070714_1009096713	3300005435	Agricultural Soil	FLVRLEVLRQLANAFAKQSDLDLWAPGIAGSSPVLVNEGSLLLSG*
Ga0070713_1006260992	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VVFLVRLEVLRQLADAFAKQSDLDLWAPGIAGSSPVLVNEGFLLLSG*
Ga0070699_1009639711	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AVILLVRFEVLRQLTNALAQQRDLDFGAARIGGMRPVLVDEGFLLLSG*
Ga0070699_1021180392	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MIFQVRLEVVLQLTNAFAQQSDLDFWTARIGGMRAVLVNEGFLLLSG*
Ga0066661_102991551	3300005554	Soil	MVLQVRFEVVRQLTNPFAQQSDLDFWTARIGGVRSVLINDRFLLLSG*
Ga0068854_1002832031	3300005578	Corn Rhizosphere	EVLRQLTNAFAQQSDLDFWTARIGGMRSVLVNEGFLLLSG*
Ga0066691_100593384	3300005586	Soil	RQLPNAFADQRDLDLRAPGVRSMRTVLVNEGFLLLSG*
Ga0066654_107266961	3300005587	Soil	VFLVRFEVLRQLANALAQQRDLYFWTARIGGMRAMLVNEGPFLLSG*
Ga0068856_10000292518	3300005614	Corn Rhizosphere	MVFLVRLEVLRQLTNAFAQQSDLDFWTARIGGMRSVLVNEGFLLLS
Ga0068860_1002460741	3300005843	Switchgrass Rhizosphere	VLLVRFEVIRQLANTLAQQRDLDFGAARISSVGAVLVDEGFLLLSG*
Ga0075280_101447411	3300005904	Rice Paddy Soil	KVFRQLTNALAQQRYLDFRASRVRSVRAILVNEGFLLLSG*
Ga0066656_105718811	3300006034	Soil	VIFQVRFEVVRQLTNPFAQQSDLDFWTARIGGVRSVLINNGFLLLSG*
Ga0075030_1000511805	3300006162	Watersheds	LADQHEKSAARAVVFLVRLEVLRQLANAFAKQSDLHFRASGIACVGPVLVNEGFLLLSG*
Ga0075030_1004881652	3300006162	Watersheds	RLEVLRQLANAFTEQRDLDFRTAGIAWMRAVLVDEGFFVLSG*
Ga0070712_1014726422	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LTNAFAQQSDLDFWTARIGGMRAVLINEGFLLLSG*
Ga0097621_1006001262	3300006237	Miscanthus Rhizosphere	RFEVLRQLTNALAQQSDLNFRAAGIGSMGCILVNEGFLLLSG*
Ga0066658_106862102	3300006794	Soil	FLVRLEVLRQLANAFAKQSDLDLGAPGIAGSSPVLVNEGFLLLSG*
Ga0079221_101391671	3300006804	Agricultural Soil	KVFRQLTNSLAQQCDLDLRAPGVRGMRAILVNEGFLLLSG*
Ga0079220_119671471	3300006806	Agricultural Soil	MIFQVRFEVVRQLTNAFAQQSDLDFWTARIGGVSSVLINEGFLLLSG*
Ga0079220_120177172	3300006806	Agricultural Soil	IFLVRFEVLRQLTNALAQQSDLNFRAAGVGSMGCILVNEGFLLLSG*
Ga0105240_103020754	3300009093	Corn Rhizosphere	RFEVLRQLTNAFAQQSDLDFWTARIGGVRSVLINDRFLLLSG*
Ga0105241_105185692	3300009174	Corn Rhizosphere	EKTAARAMVLLVRFEVLRQLTNALAQQRDLDFGAARVGGMGPVLVDEGFLLLSG*
Ga0105242_127998151	3300009176	Miscanthus Rhizosphere	VLLVRFEVIRQLANALAKQRDLDFGAARIGGMRSVLVDEGFLLLSG*
Ga0105248_101272393	3300009177	Switchgrass Rhizosphere	LVRLEVLRQLANSFTQQRNLDFGAAGVGRMRSVSVNEGLLLLSG*
Ga0105237_100279561	3300009545	Corn Rhizosphere	MIFQVRFEVVRQLTNAFAQQSDLDFWTARIGGVRSVLINDRFLLLSG*
Ga0105237_103063763	3300009545	Corn Rhizosphere	VFLVRFEVLRQLTNAFAQQSDLDFWTARIGGMRAVLVNEGFLLLSG*
Ga0105238_100690571	3300009551	Corn Rhizosphere	LRQLTNAFAQQSDLDFWTARIGGMRAVLVNEGFLLLSG*
Ga0105249_120116841	3300009553	Switchgrass Rhizosphere	QLTNAFAQQSDLDFWTARIGGMRSVLVNEGFLLLSG*
Ga0116215_13034561	3300009672	Peatlands Soil	RAVVFLVRLEVLRQLANAFTQQRDLNFRAAGIARMRAVLVDEGFLVLSG*
Ga0123355_102573734	3300009826	Termite Gut	EKSAARAVVFLVRLEVLRQLANPLAKQGNLDFRATGIARMRAVLVNEGFFLLSG*
Ga0123355_103245214	3300009826	Termite Gut	EKSAARAVVFLVRLEVLRQLANPLAKQGNLDFRATGIARMRAVSVNEGFLLLSG*
Ga0123355_112206382	3300009826	Termite Gut	GQLANPLAKQSNLDFGATGIARMRAVLVNEGFLLLSG*
Ga0126380_102138261	3300010043	Tropical Forest Soil	AVVFLVRLEVLRQLANPFAEQGDLDFRASGIARMRAVLVNEGFLLLSG*
Ga0126373_100337781	3300010048	Tropical Forest Soil	QVRFEVLRQLTNAFAQQSDLDFWTARIGGMRSVLVNEGFLLLSG*
Ga0126373_109114101	3300010048	Tropical Forest Soil	QVRFEVLRQLTNAFAQQSDLDFWTARIGGMRSVLVNEGFLLFSG*
Ga0126373_116200661	3300010048	Tropical Forest Soil	VLRQLANPFAEQGDLDFRASGIARMRAVLVNERFLLLSG*
Ga0123356_114334432	3300010049	Termite Gut	MVFLVRLEVLRQLTNAFAQQSDLDFWTTRIGGMRSVLVNEGFLLLSG*
Ga0134086_103467611	3300010323	Grasslands Soil	RFEVARQLTNPFAQQSDLDFWTARIGRVRSVLINNGFLLLSG*
Ga0126370_116833862	3300010358	Tropical Forest Soil	RQLTNAFAQQSDLDFWTARIGGVRSVLINDRFLLLSG*
Ga0126372_116738182	3300010360	Tropical Forest Soil	RQLANAFAKQSDLNFRAAGIACMRAVLINEGFLLLSG*
Ga0126372_127740291	3300010360	Tropical Forest Soil	ARAMIFQVRFEVVRQLTNAFAQQSDLYFWTARIGRVRSVLINDRFLLLSG*
Ga0126379_112135832	3300010366	Tropical Forest Soil	TVVLQVRFEVFRQLTNAFAQQSDLDFWAARIGGMRSVLINEGFLLFSG*
Ga0105239_134382781	3300010375	Corn Rhizosphere	QLANALAKQRDLDFGAARIGGMRSVLVDEGFLLLSG*
Ga0126381_1015839651	3300010376	Tropical Forest Soil	RFEVLRQLTNAFAQQSDLDFWTARIGGMRSVLVNEGFLLLSG*
Ga0126381_1026103742	3300010376	Tropical Forest Soil	ATRAVILQVRFEVLRQLTNAFAQQSDLDFWTARIGGMRSVLINEGFLLFSG*
Ga0126381_1042201222	3300010376	Tropical Forest Soil	LVCLEVLRQLANAFAQQSDLDFWTARIGGMRAVLINDGSLLLSG*
Ga0134126_102543753	3300010396	Terrestrial Soil	FEVVRQLTNALAQQSDLNFRAAGIGSVGTVLIND*
Ga0134127_126696752	3300010399	Terrestrial Soil	FLVRFEVLRQLTNAFAQQSDLDFWTARIGGMRAVLVNEGFLLLSG*
Ga0137392_102071582	3300011269	Vadose Zone Soil	LLVRFEVLRQLTNALAQQRDLDFGAARIGGMRPVLVDEGFLLLSG*
Ga0137389_100693261	3300012096	Vadose Zone Soil	MIFQVRLEVVLQLTNAFAQQSDLNLWTARIGGMRAVLVNEGFLLLSG*
Ga0137364_105575102	3300012198	Vadose Zone Soil	RAVVFLVRLEVLRQMTDAFAQQSDLDLWAAGVGSMRRIGLNEGFFLLSG*
Ga0137383_102958951	3300012199	Vadose Zone Soil	RQLTNPFAQQSDLDFWTARIGGVRSVLINDRFLLLSG*
Ga0137381_100255636	3300012207	Vadose Zone Soil	VLQVRFEVVCQLTDAFAQQSDLDFRTPSIGGMRSVLINDRFLLLSG*
Ga0137381_103627702	3300012207	Vadose Zone Soil	VRLEVLRQVTNALAQKRDLDFWAAGVRAMSTVLVNEGLLLLSG*
Ga0137379_100203021	3300012209	Vadose Zone Soil	VVFLVRLEVLRQLANAFAEQRDLDFRAAGIAGMLPVLVDEGFLVLSG*
Ga0137377_109778131	3300012211	Vadose Zone Soil	VLRQLANAFAEQRDLDFRAAGIAGMLPVLVDEGFLVLSG*
Ga0137367_103472171	3300012353	Vadose Zone Soil	DQHEKPAARAVVFLVRLEVLRQLPNPFAQQSDLYFRASGIARMGPVLVNEGFLLLSG*
Ga0137366_107577732	3300012354	Vadose Zone Soil	EKTAARAMVFQVRFEVARQLTNAFAQQSDLNFWTARIGGMRAVLVNEGFLMLSG*
Ga0137384_100684567	3300012357	Vadose Zone Soil	LRQLANAFAEQRDLEFRAAGIAGMLPVLVDEGFLVLSG*
Ga0137384_101584192	3300012357	Vadose Zone Soil	MIFQVHFEVVCQLTDAFAQQSDLDFWTARIGGMRPVLINDRFLLLSG*
Ga0137384_108325101	3300012357	Vadose Zone Soil	TNALAQQRDLDFGAARIGGMGPVLVDEGFLLLSG*
Ga0150984_1188914382	3300012469	Avena Fatua Rhizosphere	RLEVLRQLTNPFAEQRNLNFRTARIRGMRAVLVDEGLFLLSG*
Ga0137373_103137833	3300012532	Vadose Zone Soil	RAMVLQVRLEVVRQLTNAFAQQSDLDFWAARIGGVRSVLINDGFLLLSG*
Ga0137410_115900481	3300012944	Vadose Zone Soil	LQLTNPFAQQSDLYLWAARIGGMRAVLVNEGFLLLSG*
Ga0126375_106535422	3300012948	Tropical Forest Soil	AARAVVFLVRLEVLRQLANPLAKQSDLDFGTAGIARVRSVLVNEGSFLLSG*
Ga0126369_101162821	3300012971	Tropical Forest Soil	QATPLADQHEKAAARAVVFLVRLEVLRQLANPFAEQSDLHFRAAGIARVGPVLVNEGFLLLSG*
Ga0134087_107176012	3300012977	Grasslands Soil	EKSAARAVVFLVRLEVLRQLPNTFAKQSDLNLGAAGIARSSPVLVNEGFLLLSG*
Ga0164307_101577422	3300012987	Soil	MVLQVRLEVVLQLTNAFAQQSDLDFGTARIGGMGPVLVNEGFLLLSG*
Ga0157373_101786373	3300013100	Corn Rhizosphere	MVFLVRFEVLRQLTNAFAQQSDLDFWTARIGGMRAVLVNEGFLLLSG*
Ga0157374_114070601	3300013296	Miscanthus Rhizosphere	AARAVVFLVRLEVLRQLANAFAKQSDLDLWAPGIAGSSPVLVNEGFLLLSG*
Ga0157375_121021552	3300013308	Miscanthus Rhizosphere	LLVRFEVIRQLANTLAQQRDLDFGAARISSVGAVLVDEGFLLLSG*
Ga0120132_10009153	3300013832	Permafrost	MVFLVRFEVVRQLANTFAQQSDLDFWTARIGGVSSVLVDEGFLLLSG*
Ga0182008_107157551	3300014497	Rhizosphere	MVFLVRFEVLRQLTNAFAQQSDLDFWTARIGGVRSVLINNGFLLLSG*
Ga0157379_105163742	3300014968	Switchgrass Rhizosphere	VVLLVRFEVIRQLANTLAQQRDLDFGAARISSVGAVLVDEGFLLLSG*
Ga0137403_103828894	3300015264	Vadose Zone Soil	VLRQLTNALAQQRDLDFGAARIGGMGPVLVNEGFLLLSG*
Ga0182032_107677022	3300016357	Soil	FLVRLEVLRQLANALAEQSDLDFGTAGVARMRAVLVNEGFLLLSG
Ga0187817_101058581	3300017955	Freshwater Sediment	EKPAARAVVFLVRLEVLRQLANPFAKQCDLDFRASGVAGMRVVLVNEGFLLLPR
Ga0066655_101996702	3300018431	Grasslands Soil	QVRFEVVRQLTNPFAQQSDLDFWTARIGGVRSVLINDRFLLLSG
Ga0066662_114084661	3300018468	Grasslands Soil	LADQHEKAAARAVVFLVRLEVLRQLPNPFADQRDLDLRAPGVRSMRTVLVNEGFLLLSG
Ga0066669_106241102	3300018482	Grasslands Soil	FQVRFEVVRQLTNPFAQQSDLDFWTARIGGVRSVLINNGFFLLSG
Ga0173482_101368712	3300019361	Soil	MVFLVRFEVLRQLTNAFAQQSDLDFWTARIGGMRSVLVNEGFLLLSG
Ga0179592_103727641	3300020199	Vadose Zone Soil	QHEKTAARAMVLLVRFEVIRQLANPFAKQRDLDFGAARIGGMRAVLVDEGFLLLSG
Ga0210403_100796231	3300020580	Soil	LVRFEVFRQLTDALAYQRDLDFGATRVGGMRAVVVNEGFLLLSG
Ga0210400_105788972	3300021170	Soil	MIFQVRFEVVLQMTNTFAQQSDLYLWTARIGGMRAVLVNEGFLLLSG
Ga0126371_103467061	3300021560	Tropical Forest Soil	QVRFEVLRQLTNAFAQQSDLDFWTARIGGMRSVLVNEGFLLFSG
Ga0242642_10597691	3300022504	Soil	VVLQVRLEVLRQMANALAKQRDLNFRTAGIVRVRTVLVNEGSFFVLWLALTW
Ga0207700_107622202	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VVFLVRLEVLRQLTDTFAEKGDLNFRAAGIARMRAVLVDEGFLVLSG
Ga0207711_116750392	3300025941	Switchgrass Rhizosphere	LVRLEVLRQLANSFTQQRNLDFGAAGVGRMRSVSVNEGLLLLSG
Ga0209761_12495041	3300026313	Grasslands Soil	LVRLEVLRQVTNALAQKRDLDFWAACVRAMSTVLVNEGLLLLSG
Ga0209804_11048612	3300026335	Soil	MIFLVRFEVVRQLTYTFAQQSNLDFRAAGIGGMRSVLIND
Ga0209157_10692662	3300026537	Soil	EVLRQVTNALAQKRDLDFWAACVRAMSTVLVNEGLLLLSG
Ga0207820_1135201	3300026809	Tropical Forest Soil	AVVFLVRFEVLRQLANPFAEQSDLDFWAAGIARMRSVLVDEGFFVLSG
Ga0207803_10209021	3300027000	Tropical Forest Soil	VFLVRFEVLRQLANPFAEQSDLDFWAAGIARMRSVLVDEGFFVLSG
Ga0209003_10791493	3300027576	Forest Soil	EVLRQLANAFAEQRDLDFRAAGIAGMRAVLVDEGFLVLSG
Ga0209117_10343451	3300027645	Forest Soil	FLVRLEVLRQLANPFAEQRDLDFRAAGIAGMRPVLVDEGFLVLSG
Ga0268264_108303332	3300028381	Switchgrass Rhizosphere	LRQLANSFTQQRNLDFGAAGVGRMRSVSVNEGLLLLSG
Ga0247271_1021378	3300029903	Soil	TPAYHHKKTATRSVILLVRTEVLGQLADALAEKGNLNFRAAGIARMRAVLVDEGFLVLSG
Ga0311360_115387481	3300030339	Bog	VVFLVRFKMLRQLTNPFTQQRDLYFGTPRVGGMGTVLVNEGFFLLSG
Ga0311356_108945842	3300030617	Palsa	AVVFLVRLEVLRQLPNTLAEQCNLNFGAPGVTGMRAVLVDEGFFVLSG
Ga0170834_1124778432	3300031057	Forest Soil	MIFQVRFEVVRQLTNAFAQQSDLDFWTARIGGVRSVLVNNGFLLLSG
Ga0170824_1037098592	3300031231	Forest Soil	RQLANPFAKQRDLDFGAARIGGMRAVLVDEGFLLLSG
Ga0170824_1196333662	3300031231	Forest Soil	MIFQVRFEVVRQLTNAFAQQSDLDFWTARIGGVSSVLINEGFLLLSG
Ga0310915_105282102	3300031573	Soil	LVCLEVLRQLANAFAQQSDLDFWTARFGGIRSVLINDRSLLLSG
Ga0306921_124095491	3300031912	Soil	LLVCLEVLRQLANAFAQQSDLDFWTARIGGMRSVLINDRSLLLSG
Ga0318533_112750382	3300032059	Soil	VLLVCLEVLRQLANAFAQQSDLDFWTARIGGMRSVLINDRSLLLSG
Ga0306920_1000720101	3300032261	Soil	KTAARAMIFQVRFEVLRQLTNAFAQQSDLDFWTARIGGMRSVLINDRSLLLSG
Ga0370497_0202137_346_489	3300034965	Untreated Peat Soil	VVFLVRFEVLRQLANAFAQQRDLDFRATGVGSVRTVLVNEGLLLLSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067967

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences