Metagenome / Metatranscriptome Family F068021

Basic Information
Family ID	F068021
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	43 residues
Representative Sequence	MRCPACGVGINIDTNRLASAAEEMQKAIEKVPPEITIKFFR
Number of Associated Samples	112
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.20 %
% of genes near scaffold ends (potentially truncated)	64.00 %
% of genes from short scaffolds (< 2000 bps)	93.60 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Bacteria (60.800 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.000 % of family members)
Environment Ontology (ENVO)	Unclassified (20.800 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.800 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.19% β-sheet: 2.90% Coil/Unstructured: 73.91%
Feature Viewer

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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00487	FA_desaturase	6.40
PF00313	CSD	4.80
PF13763	DUF4167	3.20
PF13193	AMP-binding_C	3.20
PF01436	NHL	2.40
PF00294	PfkB	1.60
PF00011	HSP20	1.60
PF07045	DUF1330	1.60
PF13683	rve_3	1.60
PF01841	Transglut_core	0.80
PF12833	HTH_18	0.80
PF01145	Band_7	0.80
PF07369	DUF1488	0.80
PF04055	Radical_SAM	0.80
PF00571	CBS	0.80
PF01402	RHH_1	0.80
PF09586	YfhO	0.80
PF13701	DDE_Tnp_1_4	0.80
PF13333	rve_2	0.80
PF07592	DDE_Tnp_ISAZ013	0.80
PF00239	Resolvase	0.80
PF02738	MoCoBD_1	0.80
PF07690	MFS_1	0.80
PF03006	HlyIII	0.80
PF02913	FAD-oxidase_C	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	6.40
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	6.40
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.60
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.60
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.80
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.80
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.80
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.80 %
Unclassified	root	N/A	39.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.80 %
Unclassified	root	N/A	39.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.80 %
Unclassified	root	N/A	39.20 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.40 %
Unclassified	root	N/A	39.20 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.40 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.00 %
Unclassified	root	N/A	39.20 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	32.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.20 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.00 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	3.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.60 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.60 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	1.60 %
Kaistiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae	0.80 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.80 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.20 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.00 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.20 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	1.60 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.60 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.80 %
Kaistia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia	0.80 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.80 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.80 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.20 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.20 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	1.60 %
Methylocystis heyeri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis heyeri	1.60 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.60 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.80 %
Bradyrhizobium guangxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangxiense	0.80 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	0.80 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.80 %
Kaistia granuli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia → Kaistia granuli	0.80 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.80 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.20 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.20 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	1.60 %
Methylocystis heyeri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis heyeri	1.60 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.60 %
unclassified Ensifer	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer	0.80 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	0.80 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	0.80 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.80 %
Bradyrhizobium guangxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangxiense	0.80 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.80 %
Kaistia granuli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia → Kaistia granuli	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.20 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.20 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	1.60 %
Methylocystis heyeri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis heyeri	1.60 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.60 %
Ensifer sp. IC3342	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. IC3342	0.80 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	0.80 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	0.80 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.80 %
Bradyrhizobium guangxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangxiense	0.80 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.80 %
Kaistia granuli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia → Kaistia granuli	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZN2CUW02JAFO4	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300000729\|JGI12371J11900_1011923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	581	Open in IMG/M
3300000858\|JGI10213J12805_10071900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. IC3342	1281	Open in IMG/M
3300000955\|JGI1027J12803_103729640	Not Available	554	Open in IMG/M
3300002917\|JGI25616J43925_10199706	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300003368\|JGI26340J50214_10062840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1000	Open in IMG/M
3300004152\|Ga0062386_101080122	Not Available	666	Open in IMG/M
3300005434\|Ga0070709_11422505	Not Available	562	Open in IMG/M
3300005435\|Ga0070714_101079344	Not Available	782	Open in IMG/M
3300005435\|Ga0070714_102494491	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005538\|Ga0070731_10710242	Not Available	668	Open in IMG/M
3300005552\|Ga0066701_10223363	Not Available	1160	Open in IMG/M
3300005610\|Ga0070763_10207650	Not Available	1047	Open in IMG/M
3300005719\|Ga0068861_101636462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	635	Open in IMG/M
3300005764\|Ga0066903_106530469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	608	Open in IMG/M
3300005843\|Ga0068860_101896053	Not Available	618	Open in IMG/M
3300005921\|Ga0070766_10427990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	871	Open in IMG/M
3300005994\|Ga0066789_10338567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300006057\|Ga0075026_100274539	Not Available	912	Open in IMG/M
3300006059\|Ga0075017_100715588	Not Available	770	Open in IMG/M
3300006102\|Ga0075015_100603915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	642	Open in IMG/M
3300006174\|Ga0075014_100473287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300006175\|Ga0070712_101717888	Not Available	549	Open in IMG/M
3300006177\|Ga0075362_10529360	Not Available	605	Open in IMG/M
3300006195\|Ga0075366_10518687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	737	Open in IMG/M
3300006577\|Ga0074050_11128986	Not Available	614	Open in IMG/M
3300006845\|Ga0075421_102603666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300006853\|Ga0075420_101463539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	586	Open in IMG/M
3300006854\|Ga0075425_102632512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300006871\|Ga0075434_100231409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1867	Open in IMG/M
3300006893\|Ga0073928_10178507	All Organisms → cellular organisms → Bacteria → Proteobacteria	1683	Open in IMG/M
3300007076\|Ga0075435_101523557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	586	Open in IMG/M
3300007265\|Ga0099794_10062362	Not Available	1813	Open in IMG/M
3300007788\|Ga0099795_10007822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3010	Open in IMG/M
3300007788\|Ga0099795_10607711	Not Available	521	Open in IMG/M
3300009088\|Ga0099830_10022109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4159	Open in IMG/M
3300009100\|Ga0075418_11431566	Not Available	750	Open in IMG/M
3300009137\|Ga0066709_103038731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	615	Open in IMG/M
3300009143\|Ga0099792_10407439	Not Available	833	Open in IMG/M
3300009162\|Ga0075423_10571905	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300009672\|Ga0116215_1459408	Not Available	551	Open in IMG/M
3300009839\|Ga0116223_10638796	Not Available	613	Open in IMG/M
3300010358\|Ga0126370_11758717	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300010371\|Ga0134125_11157276	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300010379\|Ga0136449_102219625	All Organisms → cellular organisms → Bacteria → Proteobacteria	800	Open in IMG/M
3300010379\|Ga0136449_104678457	Not Available	500	Open in IMG/M
3300010401\|Ga0134121_11609569	Not Available	669	Open in IMG/M
3300011120\|Ga0150983_16018257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	677	Open in IMG/M
3300011270\|Ga0137391_11211538	Not Available	602	Open in IMG/M
3300012189\|Ga0137388_10137036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2151	Open in IMG/M
3300012200\|Ga0137382_11273871	Not Available	520	Open in IMG/M
3300012203\|Ga0137399_10338248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1249	Open in IMG/M
3300012203\|Ga0137399_10626012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300012207\|Ga0137381_10207466	Not Available	1699	Open in IMG/M
3300012361\|Ga0137360_10173670	Not Available	1727	Open in IMG/M
3300012362\|Ga0137361_10119588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2319	Open in IMG/M
3300012944\|Ga0137410_10936621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	734	Open in IMG/M
3300012987\|Ga0164307_11126036	Not Available	646	Open in IMG/M
3300013770\|Ga0120123_1038509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1007	Open in IMG/M
3300014158\|Ga0181521_10181553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis heyeri	1172	Open in IMG/M
3300014162\|Ga0181538_10574439	Not Available	589	Open in IMG/M
3300015241\|Ga0137418_11245273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	521	Open in IMG/M
3300015242\|Ga0137412_10083203	All Organisms → cellular organisms → Bacteria → Proteobacteria	2605	Open in IMG/M
3300015374\|Ga0132255_103789602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	642	Open in IMG/M
3300016270\|Ga0182036_10250699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1325	Open in IMG/M
3300016445\|Ga0182038_11991584	Not Available	526	Open in IMG/M
3300017648\|Ga0180216_1185698	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300017943\|Ga0187819_10288028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	956	Open in IMG/M
3300018003\|Ga0187876_1235926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis heyeri	601	Open in IMG/M
3300018037\|Ga0187883_10467810	Not Available	648	Open in IMG/M
3300018060\|Ga0187765_10582906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	720	Open in IMG/M
3300018073\|Ga0184624_10472209	Not Available	548	Open in IMG/M
3300018076\|Ga0184609_10076184	All Organisms → cellular organisms → Bacteria → Proteobacteria	1477	Open in IMG/M
3300018086\|Ga0187769_10090076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2192	Open in IMG/M
3300018086\|Ga0187769_10515652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	902	Open in IMG/M
3300019257\|Ga0180115_1314367	Not Available	502	Open in IMG/M
3300020580\|Ga0210403_10651930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	847	Open in IMG/M
3300021078\|Ga0210381_10205867	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300021086\|Ga0179596_10019520	All Organisms → cellular organisms → Bacteria → Proteobacteria	2427	Open in IMG/M
3300021086\|Ga0179596_10529314	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300021090\|Ga0210377_10283358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Kaistia → Kaistia granuli	1021	Open in IMG/M
3300021178\|Ga0210408_10475571	Not Available	994	Open in IMG/M
3300021420\|Ga0210394_10701841	Not Available	887	Open in IMG/M
3300021420\|Ga0210394_11779391	Not Available	514	Open in IMG/M
3300021445\|Ga0182009_10039656	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300022557\|Ga0212123_10364122	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300022557\|Ga0212123_10840784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	547	Open in IMG/M
3300025915\|Ga0207693_11265908	Not Available	553	Open in IMG/M
3300025915\|Ga0207693_11414709	Not Available	516	Open in IMG/M
3300026446\|Ga0257178_1045848	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300026469\|Ga0257169_1016474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangxiense	1010	Open in IMG/M
3300026489\|Ga0257160_1068582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	625	Open in IMG/M
3300026498\|Ga0257156_1051299	Not Available	848	Open in IMG/M
3300026824\|Ga0207723_101579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1996	Open in IMG/M
3300026947\|Ga0207853_1052179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	508	Open in IMG/M
3300027671\|Ga0209588_1196513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	629	Open in IMG/M
3300027680\|Ga0207826_1207885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	527	Open in IMG/M
3300027825\|Ga0209039_10104687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1210	Open in IMG/M
3300027889\|Ga0209380_10101121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1666	Open in IMG/M
3300027903\|Ga0209488_10026137	Not Available	4243	Open in IMG/M
3300027909\|Ga0209382_10597123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1202	Open in IMG/M
3300028047\|Ga0209526_10206942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1357	Open in IMG/M
3300028807\|Ga0307305_10269213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	777	Open in IMG/M
3300028878\|Ga0307278_10419099	Not Available	588	Open in IMG/M
3300028884\|Ga0307308_10318626	Not Available	745	Open in IMG/M
3300030885\|Ga0265743_101245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1229	Open in IMG/M
3300030978\|Ga0265757_105135	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300031184\|Ga0307499_10031226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1211	Open in IMG/M
3300031231\|Ga0170824_105583114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300031231\|Ga0170824_128749088	Not Available	908	Open in IMG/M
3300031576\|Ga0247727_11179023	Not Available	515	Open in IMG/M
3300031890\|Ga0306925_10288759	Not Available	1765	Open in IMG/M
3300031890\|Ga0306925_10644872	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300032001\|Ga0306922_11090885	Not Available	819	Open in IMG/M
3300032063\|Ga0318504_10406667	Not Available	649	Open in IMG/M
3300032076\|Ga0306924_12355762	Not Available	538	Open in IMG/M
3300032119\|Ga0316051_1001878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1339	Open in IMG/M
3300032160\|Ga0311301_10579492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1627	Open in IMG/M
3300032160\|Ga0311301_10826176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1266	Open in IMG/M
3300032180\|Ga0307471_103336277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	569	Open in IMG/M
3300032205\|Ga0307472_101440400	Not Available	670	Open in IMG/M
3300032261\|Ga0306920_101610512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	923	Open in IMG/M
3300032892\|Ga0335081_10374250	All Organisms → cellular organisms → Bacteria → Proteobacteria	1844	Open in IMG/M
3300032892\|Ga0335081_12601421	Not Available	519	Open in IMG/M
3300032896\|Ga0335075_11704362	Not Available	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.60%
Host-Associated	Host-Associated	10.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.60%
Aquatic	Environmental → Aquatic	16.00%
Plants	Host-Associated → Plants	10.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.80%
Freshwater	Environmental → Aquatic → Freshwater	8.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.40%
Sediment	Environmental → Aquatic → Sediment	4.80%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.40%
Roots	Host-Associated → Plants → Roots	1.60%
Cave	Environmental → Terrestrial → Cave	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.40%
Loam	Environmental → Terrestrial → Soil → Loam	12.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.40%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.60%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.60%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.40%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.80%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.60%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.00%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.20%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.40%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.40%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.40%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.40%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.40%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.60%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.80%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.80%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.80%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000729	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017648	Enriched Miracle-Growth compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 37_C BE-Lig MG (version 2)	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026824	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes)	Environmental	Open in IMG/M
3300026947	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 6 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030885	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030978	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032119	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068021

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_02029100	2170459003	Grass Soil	MQCPGCGIGINVDTDRLANAAEEMHKALGKVPPEITIKFYR
JGI12371J11900_10119231	3300000729	Tropical Forest Soil	MQCPSCGIRINIDTDRLANAADEIRKAIGKVPPEVTIKFFR*
JGI10213J12805_100719002	3300000858	Soil	QTVGSLKASEPMRCSRCGIGINIDTNRLAHAAEEIQRAIEKVPPEITIKFFR*
JGI1027J12803_1037296402	3300000955	Soil	IKANKHMTCPGCGVGINIDTNRMAMASEEIRKSIEMIPPEITIKFFR*
JGI25616J43925_101997061	3300002917	Grasslands Soil	TIGNLKLGKHMQCPECGIGINIDTRRLANAAEEIRRAIDKVPPEITIKFFR*
JGI26340J50214_100628401	3300003368	Bog Forest Soil	MICPGCGIGINIDTDKLANAAEEMQKAIDKTPSEITIKFFR*
Ga0062386_1010801221	3300004152	Bog Forest Soil	MICPDCRIGINIDTDKLANSADEMQKAIDKTPPEITIKFFR*
Ga0070709_114225051	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	EHMRCPACGVGINIDTNRLASATEEMRKAIEKVPPEITIKFFR*
Ga0070714_1010793442	3300005435	Agricultural Soil	SGIHMRCPGCGIGINIDTDRLASAAEEIHKALDKVPPEITIKFYR*
Ga0070714_1024944912	3300005435	Agricultural Soil	GRLKAAERMICPGCDIGINIDTDRLSRAAEEIEKAVAKTPSEITIKFFR*
Ga0070731_107102422	3300005538	Surface Soil	LKSGEHMLCSGCGIGINIDTDRLANAADEIGKAIGRAPPEITIKFFR*
Ga0066701_102233635	3300005552	Soil	HCPECGVGINIDANRLSRAADEIQKAIDKVPPEITIKFYR*
Ga0070763_102076502	3300005610	Soil	CGIGINVDTDRLANAAEEMHKALGKVPPEITIKFYR*
Ga0068861_1016364622	3300005719	Switchgrass Rhizosphere	MKCTGCGIGINIDTNRLANAAEEVRQALEKAPPEITIKFYR*
Ga0066903_1065304692	3300005764	Tropical Forest Soil	MTCPDCGIGISIDNNRLAKAAEEIRKAIEKTPPEISIKFFR*
Ga0068860_1018960531	3300005843	Switchgrass Rhizosphere	IKANEHMTCPGCGIGINIDTDRLAKATDEIQKAMDKIPPEITIKFFR*
Ga0070766_104279902	3300005921	Soil	MRCPACGVGINIDTNRLASAAEEMQKAIEKVPPEITIKFFR*
Ga0066789_103385672	3300005994	Soil	MIFPDCGIAINIDTDRSANAVKEMQIAVEKSPPEITI
Ga0075026_1002745393	3300006057	Watersheds	QIGINIDTNRLTNAADEIHGAIEKTPAEITIRFFR*
Ga0075017_1007155881	3300006059	Watersheds	HELKQTVAGLKAERHMICPGCGIGINIDTDKLANAAEEMQKAIDKTPSEITIKFFR*
Ga0075015_1006039152	3300006102	Watersheds	MTCPGCGIGITIDANRLSNVIEEIHKAIEKVPPEIRIKFYR*
Ga0075014_1004732871	3300006174	Watersheds	CPGGVGINIDMNRLSNAADEIRKTVDKVPPEITIKFF*
Ga0070712_1017178881	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KQTIARLKGNEHMTCSGCGIGINIDTNRLAKATEEIQKAIEKIPPEISIKFYR*
Ga0075362_105293601	3300006177	Populus Endosphere	MTCSGCKIGINIDTDRLAVASDEIQKALDMVPPEITVKFFQ*
Ga0075366_105186872	3300006195	Populus Endosphere	HCTGCGVGINIDTNRLANAAEEIRNAIEKVPPEITIKFYR*
Ga0074050_111289862	3300006577	Soil	LKAAERMICPGCDIGINIDTDRLSKAAEEIERAVAKTPSEITIKFFR*
Ga0075421_1026036662	3300006845	Populus Rhizosphere	NQHMTCSGCGIGINIDTDRLAKAVDEIQKAMDKIPPEITIKFFRSDLP*
Ga0075420_1014635391	3300006853	Populus Rhizosphere	GIGINIDTNRLAHAAEEMQRAIEKVPPEITIKFFR*
Ga0075425_1026325121	3300006854	Populus Rhizosphere	GIGINIDTDRLAKAVDEIQKAMDKIPPEITIKFFRSDLP*
Ga0075434_1002314092	3300006871	Populus Rhizosphere	MSCSGCGIGINVDTNRLAKATEEIQKAIEKIPPEITIKFFR*
Ga0073928_101785072	3300006893	Iron-Sulfur Acid Spring	MVCTGCEVGINIDAAKLSNAAEEMLRAMEKVPPEITIKFFR*
Ga0075435_1015235572	3300007076	Populus Rhizosphere	DLHQTIGRLKANEHMSCSGCGIGINVDTNRLAKATEEIQKAIEKIPPEITIKFFR*
Ga0099794_100623625	3300007265	Vadose Zone Soil	PECGIGINIDANRLSRAADEIQKAIDKVPPEITIKFYR*
Ga0099795_100078222	3300007788	Vadose Zone Soil	MQCPECGIGINIDTRRLANAAEEIRRAIDKVPPEITIKFFR*
Ga0099795_106077111	3300007788	Vadose Zone Soil	CGVGINIDADRLSDAADEIQRAIDKVPTEITIKFYR*
Ga0099830_100221093	3300009088	Vadose Zone Soil	MRCSGCGVGINIDADRLSNAAIEIQKAIEKVPSEITIKFYR*
Ga0075418_114315663	3300009100	Populus Rhizosphere	KAQAHMICSDCGVGINIDTNRLAKSAEEIQNAIEKNPPEISIKFFR*
Ga0066709_1030387313	3300009137	Grasslands Soil	KQTIDRLKANEHMTCSGCGIGINIDTDRLAKATDEIQKAIEKSPPEITINFFR*
Ga0099792_104074391	3300009143	Vadose Zone Soil	MSCPGRGVGISIDADRLSNAADEIQKAIEKVPSEITIKFYR*
Ga0075423_105719051	3300009162	Populus Rhizosphere	TVGSLKANKPMRCSGCGIGINIDTNRLAHAAEEIQNALEKIPPEITIKFFR*
Ga0116215_14594082	3300009672	Peatlands Soil	MYIRLGKLKAEKHMICPGCGIGINIDTDRLTNAVEKIQRAIEKSPLEITIKFFR*
Ga0116223_106387962	3300009839	Peatlands Soil	RKMICPGCGIGINIDTDKLANATEEMQKAIDKTPSEITIKFFR*
Ga0126370_117587171	3300010358	Tropical Forest Soil	MRFTGCGVGIDIDANRLSSAADEIQKAIEKVPPEITIKFYR*
Ga0134125_111572763	3300010371	Terrestrial Soil	CSGCGIGINIDTNRLAKATEEIQKAIEKIPPEISIKFYR*
Ga0136449_1022196252	3300010379	Peatlands Soil	MYIRLGKLKAEKHMICPGCGIGINIDTDRLTNAVEEKQRAIEKSPPEITIKFFR*
Ga0136449_1046784572	3300010379	Peatlands Soil	HMICPGCSIGINIDTDRIANAAEEIQKATEKSPPEITIKFFR*
Ga0134121_116095692	3300010401	Terrestrial Soil	CSACGVGINIDTNRLASAAEEIQKAIEKVPPEITIKFFR*
Ga0150983_160182572	3300011120	Forest Soil	LKSGERMQCPGCGIGINVDTDRLANAAEEMHKALGKVPPEITIKFYR*
Ga0137391_112115381	3300011270	Vadose Zone Soil	MRCPGCGVGINIDANRLASAADEIQKAIEKVPPEITIKFYR*
Ga0137388_101370362	3300012189	Vadose Zone Soil	MHCAECGIGINIDATRLANAAEEIRRAIEKVPPEITIKFFR*
Ga0137382_112738711	3300012200	Vadose Zone Soil	IRQIKSSEHMNCAGCGIGINIDANRLSSAAAEIQKAIDKMPPEITIKFYR*
Ga0137399_103382483	3300012203	Vadose Zone Soil	MQCPECGIGINIDTRRLANAAEEMRRAIDKVPPEITIKFFR*
Ga0137399_106260122	3300012203	Vadose Zone Soil	PECGIGINIDTRRLANAAEEIRRAIDKVPPEITIKFFR*
Ga0137381_102074661	3300012207	Vadose Zone Soil	MNCAGCGVGINIDANRLSSAADEIQKAIDKVPPEITIKFYR*
Ga0137360_101736704	3300012361	Vadose Zone Soil	CPGCGVGINIDTNRLANAAEEIQRAIDNVPPEITIKFFR*
Ga0137361_101195883	3300012362	Vadose Zone Soil	MRCPGCGVGINIDANRLSNAADEIQKAIEKVPPEITIKFYR*
Ga0137410_109366211	3300012944	Vadose Zone Soil	MRCSGCGVGINIDADRLSNAAIEIQKAIEKVPSEITI
Ga0164307_111260361	3300012987	Soil	IGRIKANEHMTCPGCGIGINIDTDRLAKATDEIQKAMDKIPPEITIKFFR*
Ga0120123_10385091	3300013770	Permafrost	VGINIDTNRLANAAEEIHNAIEKAPPEITIKFFR*
Ga0181521_101815531	3300014158	Bog	STMSINIDTSKLSNAVEEIRKAIEHAPPEITIKFFR*
Ga0181538_105744391	3300014162	Bog	AQSKLDRHMNCPGCSIGINIDADRMANAAEEIQKTTEKSPPEITIKFFR*
Ga0137418_112452731	3300015241	Vadose Zone Soil	MQCPECGIGINIDTRRLANAAEEIRKAIDKVPPEITIKFF
Ga0137412_100832034	3300015242	Vadose Zone Soil	MQCPECGIGINIDSRRLANAAEEIRRAIDKVPPEITIKFFR*
Ga0132255_1037896021	3300015374	Arabidopsis Rhizosphere	MTCSGCGVGINIDTDRLAKATEEIQKAIEKIPPEISIKFYR*
Ga0182036_102506993	3300016270	Soil	NAHMTCSGCGIGINIDTDRLAKATEEIQKAIEKVPPEITIKFFR
Ga0182038_119915841	3300016445	Soil	TIGRLKAQEHMTSSACGIGINIDTNRLAKATDEIQKAIEKDPPEISIKFFR
Ga0180216_11856981	3300017648	Compost	MICSGCGIGINIDTNRLANLADELQKATAKVPPEITVKFYR
Ga0187819_102880281	3300017943	Freshwater Sediment	IGDLKASEHMRCPGCGVGINIDTNRLASAVEEMQKATEKVPPEITIKFFR
Ga0187876_12359262	3300018003	Peatland	GCGISVNIDTSKLSNAVEEIRKAIEHAPPEITIKFFR
Ga0187883_104678101	3300018037	Peatland	VAGLKAERHMICPGCGIGINIDTDKLANATEEMQKAIGKTPSEITIKFFR
Ga0187765_105829061	3300018060	Tropical Peatland	MQCPSCGVGINIDTNRLANAGEEVHKAIEKVPPETTIEFFR
Ga0184624_104722091	3300018073	Groundwater Sediment	MTCPGCGIGINIDTDRLAKATDEIQKAMDKIPPEITIKFFR
Ga0184609_100761843	3300018076	Groundwater Sediment	TCPGCRVGINIDTDRLAKAAEEIQKAIKKIPPEITIKFFR
Ga0187769_100900762	3300018086	Tropical Peatland	MQCLSCGVGINIDMNRFANAADEIHKAIGKVPPEITIKFFR
Ga0187769_105156522	3300018086	Tropical Peatland	MQCSSCGVGINVDTKRLANAADEIYKAIGKVPPEIAIKFFR
Ga0180115_13143672	3300019257	Groundwater Sediment	MRCSRCGIGINIDTNRLAHAAEEIQRAIEKVPPEITIKFFR
Ga0210403_106519301	3300020580	Soil	EHMVCSSCGIGINIDTNRLAKAAEEIQKALGKTPPEITIKFFR
Ga0210381_102058671	3300021078	Groundwater Sediment	MTCPGCHVGINIDTNRLANAAEEIHKAIEKSPPEITIKFFAKSEFG
Ga0179596_100195203	3300021086	Vadose Zone Soil	MQCPECGIGINIDTRRLANAAEEIRRAIDKVPPEITIKFFR
Ga0179596_105293141	3300021086	Vadose Zone Soil	MHCAECGIGINIDATRLANAAEEIRRAIEKVPPEITIKFFR
Ga0210377_102833583	3300021090	Groundwater Sediment	PGCGIGINIDTSRLAKAAEEIQKAIDKVPPEITIKFFR
Ga0210408_104755712	3300021178	Soil	SSCGIGINIDTDRLAKAAEEIQKALDKTPPEITIKFFR
Ga0210394_107018412	3300021420	Soil	MRCPSCGVGINIDTNRLADAAEEMHKALEKAPSEITIKFYR
Ga0210394_117793911	3300021420	Soil	ICPGCGIGINIDTDKLANAAEEMQKAIDKTPSEITIKFVR
Ga0182009_100396562	3300021445	Soil	MRCGGCGVGINIDTNRLANAADEMRSAMEKVPPEITIKFFH
Ga0212123_103641222	3300022557	Iron-Sulfur Acid Spring	MVCTGCEVGINIDAAKLSNAAEEMLRAMEKVPPEITIKFFR
Ga0212123_108407841	3300022557	Iron-Sulfur Acid Spring	LKSGEHMQCPGCGIGINVDTDRLANAAEELHKALGKVPPEITIKFYR
Ga0207693_112659082	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	HSGHWQNEHMRCPGCDVGINIDTNRLANAAEEIHKAIEKVPPEITIKFFR
Ga0207693_114147091	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	CGQELKQTIARLKGNEHMTCSGCGIGINIDTNRLAKATEEIQKAIEKIPPEISIKFYR
Ga0257178_10458481	3300026446	Soil	HMQCPECGIGINIDSRRLANAAEEIRRAIDKVPPEITIKFFR
Ga0257169_10164742	3300026469	Soil	GQIKSSEHMGCSGCGVGINIDADRLSNAAIEIQKAIEKVPSEITIKFYR
Ga0257160_10685822	3300026489	Soil	MQCPECGIGINIDTRRLANAAEEMRRAIDKVPPEITIKFFR
Ga0257156_10512991	3300026498	Soil	EHMRCSGCGVGINIDADRLSNAAIEIQKAIEKVPSEITIKFYR
Ga0207723_1015793	3300026824	Tropical Forest Soil	MQCPSCGIRINIDTDRLANAADEIRKAIGKVPPEVTIKFFR
Ga0207853_10521791	3300026947	Tropical Forest Soil	EQSIGRLKSGEHMQCPSCGIRINIDTDRLANAADEIRKAIGKVPPEVTIKFFR
Ga0209588_11965131	3300027671	Vadose Zone Soil	KSSEHMRCPACGVGINIDTNRLASAAEEMQKAIEKVPPEITIKFFR
Ga0207826_12078852	3300027680	Tropical Forest Soil	SIGRLKLGEHMQCPSCGVGINIDTNRFVNAADEIHKAIGKVPPEITIKFFR
Ga0209039_101046872	3300027825	Bog Forest Soil	MICPGCGIGINIDTDKLANATEEMQKAIDKTPSEITIKFFR
Ga0209380_101011212	3300027889	Soil	MRCPACGVGINIDTNRLASAAEEMQKAIEKVPPEITIKFFR
Ga0209488_100261375	3300027903	Vadose Zone Soil	MSCPGRGVGISIDADRLSNAADEIQKAIEKVPSEITIKFYR
Ga0209382_105971233	3300027909	Populus Rhizosphere	MSCSGCGIGINVDTNRLAKATEEIQKAIEKIPPEITIKFFR
Ga0209526_102069424	3300028047	Forest Soil	MVCTGCGVGINIDAAKLSNAAEEMLRAMEKVPPEIT
Ga0307305_102692131	3300028807	Soil	MTCPGCHVGINIDTNRLANAAEEIHKAIEKSPPEITIKFFAK
Ga0307278_104190991	3300028878	Soil	GRLRTAEHMTCPGCHVGINIDTNRLANAAEEIHKAIEKSPPEITIKFFAK
Ga0307308_103186261	3300028884	Soil	RLKAAERMICPGCDIGINIDTDRLSKAAEEIERAVAKTPSEITIKFFR
Ga0265743_1012452	3300030885	Soil	MCCRGCGVGINIDMNRLANAAEEIRRALEKVPPEITIKFFR
Ga0265757_1051351	3300030978	Soil	STHMRCRGCDVGINIDTNRLANAAEEIRRALEKVPPEITIKFHSA
Ga0307499_100312261	3300031184	Soil	NEHMTCPGCGVGINIDTDRLAKATDEIQKAMDKIPPEITIKFFR
Ga0170824_1055831142	3300031231	Forest Soil	LKSNEHMTCPGCGIGINIDTDRLAKATEEIQKAIGKFPPEITIKFFR
Ga0170824_1287490881	3300031231	Forest Soil	LKAAERMICPGCDIGINIDTDRLSKAAEEIERAVAKTPSEITIKFFR
Ga0247727_111790232	3300031576	Biofilm	PGCGIGINIDTNRLAKAAEEIQKAIEKIPPEITIKFFR
Ga0306925_102887591	3300031890	Soil	PGCGIGINIDTNRLANAAEEMPKKVPPEITIKFYR
Ga0306925_106448724	3300031890	Soil	GCDVGINIDADRLANAAEEIRRALEKAPPEITIRFFQER
Ga0306922_110908852	3300032001	Soil	MLTLVTFPGCGIGIDIDTNRLANAAEEMPKKVPPEITIKFYR
Ga0318504_104066672	3300032063	Soil	LRLSKSMRCRGCDVGINIDTDRLANAAEELCRALEKVPPEITIKFFQ
Ga0306924_123557622	3300032076	Soil	EKHMTCPRCGIGINIDTDRLANAAQEIRKAIEKSPPEITIKFYR
Ga0316051_10018783	3300032119	Soil	MRCRGCGVGINIDTNRLANAADEMQSAMEKVPPEITVKFFH
Ga0311301_105794922	3300032160	Peatlands Soil	MYIRLGKLKAEKHMICPGCGIGINIDTDRLTNAVEEKQRAIEKSPPEITIKFFR
Ga0311301_108261761	3300032160	Peatlands Soil	CPGCGIGINIDTDKLANAAEEMQKAIDKTPSEITIKFFR
Ga0307471_1033362771	3300032180	Hardwood Forest Soil	GHDLKQTIGRLKANEHMTCPGCGIGINIDTNRLAKAAEEIRNAIEKIPAEITIKFFR
Ga0307472_1014404002	3300032205	Hardwood Forest Soil	MRCPGCAIGINIDTNKLANAAAEIGKAIDMVPPEITIKFFR
Ga0306920_1016105122	3300032261	Soil	MQCPGCGIGINIDTNRLANAAEEMPKKVPPEITIKFYR
Ga0335081_103742501	3300032892	Soil	RSGEHMRCAGCGIGINIDTNRLADAADQIRKAIEKMPPEITIKFFR
Ga0335081_126014212	3300032892	Soil	MQCRACGIGINVDTDRLANAADEIHKAIEKVPPEITIKFFR
Ga0335075_117043622	3300032896	Soil	SIGRLKSGERMQCPGCGIGVNIDTNRLANAAEEMHKVLEKVRPEITIKFYR

Hidden Markov Model


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