Metagenome / Metatranscriptome Family F068043

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068043
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	46 residues
Representative Sequence	MRIRRIAVSAAFAAGLAALPLATAKAQYYPPCSPFPLFWPFCVAG
Number of Associated Samples	99
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.10 %
% of genes near scaffold ends (potentially truncated)	79.20 %
% of genes from short scaffolds (< 2000 bps)	76.80 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.600 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.000 % of family members)
Environment Ontology (ENVO)	Unclassified (45.600 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.400 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 31.51% β-sheet: 0.00% Coil/Unstructured: 68.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00296	Bac_luciferase	15.20
PF00676	E1_dh	5.60
PF01522	Polysacc_deac_1	3.20
PF00106	adh_short	2.40
PF14312	FG-GAP_2	2.40
PF04909	Amidohydro_2	2.40
PF08281	Sigma70_r4_2	1.60
PF02525	Flavodoxin_2	1.60
PF03544	TonB_C	1.60
PF10387	DUF2442	1.60
PF00072	Response_reg	0.80
PF13458	Peripla_BP_6	0.80
PF00400	WD40	0.80
PF03167	UDG	0.80
PF00903	Glyoxalase	0.80
PF13545	HTH_Crp_2	0.80
PF00805	Pentapeptide	0.80
PF07992	Pyr_redox_2	0.80
PF00152	tRNA-synt_2	0.80
PF01339	CheB_methylest	0.80
PF08327	AHSA1	0.80
PF00872	Transposase_mut	0.80
PF00144	Beta-lactamase	0.80
PF13414	TPR_11	0.80
PF13463	HTH_27	0.80
PF03352	Adenine_glyco	0.80
PF08241	Methyltransf_11	0.80
PF13676	TIR_2	0.80
PF12872	OST-HTH	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	15.20
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	5.60
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	5.60
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	3.20
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.60
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.60
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.80
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.80
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.80
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.80
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.80
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.80
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.80
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.80
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.80
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.80
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.80
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.80
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.60 %
Unclassified	root	N/A	46.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.60 %
Unclassified	root	N/A	46.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.60 %
Unclassified	root	N/A	46.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.40 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.60 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.60 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.40 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.80 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.40 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.60 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.60 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.40 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.60 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.60 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.80 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.80 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.80 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.80 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.40 %
Azorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium	1.60 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.60 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.80 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.80 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.80 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.80 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.40 %
unclassified Azorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium	1.60 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	1.60 %
Paraburkholderia dipogonis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia dipogonis	0.80 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.80 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.80 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.80 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.40 %
Azorhizobium sp. 35-67-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 35-67-5	1.60 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	1.60 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.80 %
Paraburkholderia dipogonis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia dipogonis	0.80 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.80 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.80 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_101337120	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300004092\|Ga0062389_103744841	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300005177\|Ga0066690_10617040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	724	Open in IMG/M
3300005336\|Ga0070680_100821224	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300005518\|Ga0070699_101260365	Not Available	678	Open in IMG/M
3300005536\|Ga0070697_101605879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300005764\|Ga0066903_105637478	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005764\|Ga0066903_106295475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300006173\|Ga0070716_100955423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300006175\|Ga0070712_100464510	Not Available	1056	Open in IMG/M
3300009089\|Ga0099828_10721128	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300010046\|Ga0126384_10531844	Not Available	1018	Open in IMG/M
3300010046\|Ga0126384_12074410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300010048\|Ga0126373_10869615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	965	Open in IMG/M
3300010359\|Ga0126376_10082812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2391	Open in IMG/M
3300010359\|Ga0126376_11032699	All Organisms → cellular organisms → Bacteria → Proteobacteria	825	Open in IMG/M
3300010360\|Ga0126372_13175526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300010361\|Ga0126378_11020508	Not Available	930	Open in IMG/M
3300010361\|Ga0126378_13147965	Not Available	525	Open in IMG/M
3300010366\|Ga0126379_11783870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	719	Open in IMG/M
3300010376\|Ga0126381_100699593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1449	Open in IMG/M
3300010376\|Ga0126381_104363822	Not Available	547	Open in IMG/M
3300012096\|Ga0137389_11508204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300016294\|Ga0182041_10042506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3014	Open in IMG/M
3300016294\|Ga0182041_11493619	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300016294\|Ga0182041_11642845	Not Available	594	Open in IMG/M
3300016371\|Ga0182034_10041702	All Organisms → cellular organisms → Bacteria → Proteobacteria	2965	Open in IMG/M
3300016371\|Ga0182034_11981437	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300016404\|Ga0182037_10132656	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300016404\|Ga0182037_11660963	Not Available	569	Open in IMG/M
3300016422\|Ga0182039_10076432	Not Available	2389	Open in IMG/M
3300016422\|Ga0182039_10636793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	935	Open in IMG/M
3300016445\|Ga0182038_11858540	Not Available	544	Open in IMG/M
3300020579\|Ga0210407_10598068	Not Available	860	Open in IMG/M
3300020580\|Ga0210403_10353852	Not Available	1201	Open in IMG/M
3300020583\|Ga0210401_10795631	Not Available	805	Open in IMG/M
3300021170\|Ga0210400_10664906	Not Available	857	Open in IMG/M
3300021178\|Ga0210408_10139384	All Organisms → cellular organisms → Bacteria	1918	Open in IMG/M
3300021406\|Ga0210386_10476379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1078	Open in IMG/M
3300021406\|Ga0210386_10942561	Not Available	738	Open in IMG/M
3300021420\|Ga0210394_11713840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300021432\|Ga0210384_11904332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300021559\|Ga0210409_10566649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1002	Open in IMG/M
3300021560\|Ga0126371_12608078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia dipogonis	612	Open in IMG/M
3300022528\|Ga0242669_1020562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	955	Open in IMG/M
3300025915\|Ga0207693_10347619	Not Available	1160	Open in IMG/M
3300025915\|Ga0207693_10383640	Not Available	1099	Open in IMG/M
3300027684\|Ga0209626_1211654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300027783\|Ga0209448_10245455	Not Available	591	Open in IMG/M
3300027812\|Ga0209656_10280721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	777	Open in IMG/M
3300027829\|Ga0209773_10251049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	739	Open in IMG/M
3300027857\|Ga0209166_10597806	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300027895\|Ga0209624_10770639	Not Available	633	Open in IMG/M
3300028047\|Ga0209526_10350441	Not Available	989	Open in IMG/M
3300030618\|Ga0311354_10473931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1244	Open in IMG/M
3300031546\|Ga0318538_10076059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1695	Open in IMG/M
3300031561\|Ga0318528_10612382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300031573\|Ga0310915_10066707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2361	Open in IMG/M
3300031681\|Ga0318572_10223491	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300031682\|Ga0318560_10516852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	647	Open in IMG/M
3300031682\|Ga0318560_10704205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	546	Open in IMG/M
3300031708\|Ga0310686_105637129	Not Available	3164	Open in IMG/M
3300031719\|Ga0306917_11193588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300031720\|Ga0307469_12509476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300031744\|Ga0306918_10636554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	835	Open in IMG/M
3300031763\|Ga0318537_10251981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	655	Open in IMG/M
3300031777\|Ga0318543_10397331	Not Available	618	Open in IMG/M
3300031777\|Ga0318543_10476654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 35-67-5	559	Open in IMG/M
3300031794\|Ga0318503_10187437	Not Available	670	Open in IMG/M
3300031797\|Ga0318550_10252557	Not Available	855	Open in IMG/M
3300031797\|Ga0318550_10537987	Not Available	563	Open in IMG/M
3300031798\|Ga0318523_10079165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1589	Open in IMG/M
3300031805\|Ga0318497_10455034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300031805\|Ga0318497_10882419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300031821\|Ga0318567_10455479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300031833\|Ga0310917_10014936	All Organisms → cellular organisms → Bacteria	4349	Open in IMG/M
3300031835\|Ga0318517_10490677	Not Available	553	Open in IMG/M
3300031845\|Ga0318511_10239393	Not Available	813	Open in IMG/M
3300031845\|Ga0318511_10633648	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300031860\|Ga0318495_10093964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	1347	Open in IMG/M
3300031879\|Ga0306919_11096023	Not Available	607	Open in IMG/M
3300031890\|Ga0306925_11529410	Not Available	652	Open in IMG/M
3300031896\|Ga0318551_10047398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2155	Open in IMG/M
3300031897\|Ga0318520_10042095	All Organisms → cellular organisms → Bacteria	2358	Open in IMG/M
3300031912\|Ga0306921_10537909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1356	Open in IMG/M
3300031912\|Ga0306921_11745000	Not Available	671	Open in IMG/M
3300031912\|Ga0306921_12055280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300031941\|Ga0310912_11336663	Not Available	543	Open in IMG/M
3300031945\|Ga0310913_10743135	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300031945\|Ga0310913_10966039	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300031946\|Ga0310910_10679681	Not Available	814	Open in IMG/M
3300031946\|Ga0310910_11157173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	601	Open in IMG/M
3300031954\|Ga0306926_11573325	Not Available	755	Open in IMG/M
3300032035\|Ga0310911_10922860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300032044\|Ga0318558_10355111	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300032054\|Ga0318570_10489426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 35-67-5	561	Open in IMG/M
3300032076\|Ga0306924_10399959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1572	Open in IMG/M
3300032076\|Ga0306924_10661998	Not Available	1176	Open in IMG/M
3300032076\|Ga0306924_11358008	Not Available	760	Open in IMG/M
3300032076\|Ga0306924_11968626	Not Available	603	Open in IMG/M
3300032261\|Ga0306920_101566599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	938	Open in IMG/M
3300033134\|Ga0335073_10836574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	981	Open in IMG/M
3300033289\|Ga0310914_10645328	Not Available	952	Open in IMG/M
3300033289\|Ga0310914_11894872	Not Available	501	Open in IMG/M
3300033290\|Ga0318519_10907314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.00%
Host-Associated	Host-Associated	4.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.00%
Aquatic	Environmental → Aquatic	4.00%
Plants	Host-Associated → Plants	4.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.20%
Freshwater	Environmental → Aquatic → Freshwater	4.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.60%
Peat	Environmental → Terrestrial → Peat	0.80%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.40%
Loam	Environmental → Terrestrial → Soil → Loam	12.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.60%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1191949302	3300002568	Soil	MRFQRIAIAAAVAAGLATLPFSPAKAQYYPYPCNPFPLFWPFCAAA
Ga0063454_1003666942	3300004081	Soil	MRFQRIAIAAAFAAGLATLPFSPAKAQYYPYPCNPFPLFWPFCAAAAIVGGVGAI
Ga0062387_1013371201	3300004091	Bog Forest Soil	MRIRRIMISAAFAASLAMLPLSTAKAQFYPYPPCPAFPLFWPFCVVGAVVGTAAIIVAA
Ga0062389_1037448411	3300004092	Bog Forest Soil	MRIRRIMISAAFAASLAMLPLSTAKAQFYPYPPCPAFPLFWPFCVVGAVVGTAAIIVAAP
Ga0062595_1004818732	3300004479	Soil	MRFQRIAIAAAIAAGLAGLPLSQAKAQYYPYPCNPFPLFWPFCAAA
Ga0066690_106170401	3300005177	Soil	MRIRRIAVSAAFAAGLAALPLATAQAQYYPPCSPFPLFWPFCVAGAIVGTAATIVTA
Ga0070680_1008212242	3300005336	Corn Rhizosphere	MRIPRIATSAAFAAGLAALPLSAAQAQYYAPCSPFPLAWPFCIAGAAL
Ga0070699_1012603652	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSIRRIAVSAAFAAGLAALPLATAKAQYYHPCSPFPLFWPF
Ga0070697_1016058791	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRRIAVSAAFAAGLAALPLATAKAQYYPPCSPFPLFWPFCIAGAIVGTAA
Ga0068853_1010373551	3300005539	Corn Rhizosphere	MRFQRIAIAATIAAGLAGLPLSQAKAQYYPYPCNPFPLFWPFCAAAAVVGTVG
Ga0070704_1014476341	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRFQRIALPAVLAAGLAALPVSAAKAQPYYPYPYPCNPFPLFWPFC
Ga0066693_100392511	3300005566	Soil	MRFQRIAIAAAVAAGLATLPFSPAKAQYYPYPCNPFPLFWPFCAAAAI
Ga0066702_109923481	3300005575	Soil	MRFQRIAIAAAVTAGLATLPFSPAKAQYYPYPCNPFPLFWPFCAAAAIVGGVG
Ga0066654_106123861	3300005587	Soil	MHFQRIAIPAVLAAGLAALPVSAAKAQPYYPYPCHPFPLFWPLCAV
Ga0066903_1056374781	3300005764	Tropical Forest Soil	MHVRQIAMATALAAGLAAVPVVTAKAQYYYYPPCSPFPL
Ga0066903_1062954752	3300005764	Tropical Forest Soil	MCIRQIAISATFAAGLAALPISAAKAQYYPPCSPFPLFWPFCV
Ga0066696_107566071	3300006032	Soil	MRFQQIAIPAVLAAGLAALPVSAAKAQPYYPYPYPCNPFPLFWPFCAAA
Ga0070716_1009554231	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRIRRIAVSAAFAASLAALPLATAKAQYYPPCSPFPLFWPFCVAGA
Ga0070712_1004645101	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGIRRIAVSAAFAAGLAALPIATAQAQYYPPQYYYPPCSPFPLFWPFCVAGAI
Ga0068871_1014674311	3300006358	Miscanthus Rhizosphere	MRFQRIAIAAAIAAGLAGLPLSQAKAQYYPYPCDP
Ga0075435_1002021311	3300007076	Populus Rhizosphere	MRFQRIAIAAAIAAGLAGLPLSQAKAQYYPYPCNPFPLFWPFCAAAAVVG
Ga0099828_107211281	3300009089	Vadose Zone Soil	MPIPRIAISAVFAAGLAVLPLSAATAQYYYPPCHPFPLFWPFCAAAAVVGTAG
Ga0126384_105318442	3300010046	Tropical Forest Soil	MPIRQMAIAAAFGAGLAAVPASAAQAQYYAPCSPFPLFWPFCAA
Ga0126384_120744101	3300010046	Tropical Forest Soil	MRTRRIAVSAVFAAGLAALPLATAKAQYYPPCSPFPLFWPFCVAGAIVGTAATI
Ga0126373_108696151	3300010048	Tropical Forest Soil	MRIREIAISAACAAGLAASPISAAQAQYSPPCSPFPLFWPFCVAGALVVTAATIVT
Ga0134109_100674171	3300010320	Grasslands Soil	MRFQRIAIAAAVAAGLATLPFSPAKAQYYPYPCNPFP
Ga0134062_107478092	3300010337	Grasslands Soil	MRFQRIAIPAVLAAALAALPVSAAKAQPYYPYPCNPF
Ga0126376_100828121	3300010359	Tropical Forest Soil	MRIRRIAALAAFAAGLAALPLATAKAQYYPPCSPFPAVLA
Ga0126376_110326993	3300010359	Tropical Forest Soil	MRTRQIAVSAVFAAGLAALPLATAKAQYYPPCSPFPLFWPFCV
Ga0126372_131755262	3300010360	Tropical Forest Soil	MHLRRIAVSIVLAAALATLPFATTRAQYYPPCSPFPLFWPFCVAG
Ga0126378_110205083	3300010361	Tropical Forest Soil	MAIAAAFAAGLAVVPVSAAQAQYYPPCSPFPLFWPFCA
Ga0126378_128417021	3300010361	Tropical Forest Soil	MRIRPIVISVALASGLAGLPFSTATAQYYAPCSPFPL
Ga0126378_131479651	3300010361	Tropical Forest Soil	VFAAGLAALPPATAKAQYYPPCSPFPLLWPFCVAGAIVGTAATIVAAPFVALTAP
Ga0126379_117838702	3300010366	Tropical Forest Soil	MPIRQMAIAAAFAAGLAAVPVSAAQAQYYPPCSPFPLFWP
Ga0126381_1006995931	3300010376	Tropical Forest Soil	MPIRQMAIAAAFAAGLAAVPVSAAQAQYYPPCSPFPLFWPFCAAG
Ga0126381_1043638221	3300010376	Tropical Forest Soil	MPIRQMAIAAAFAAGLAAVPVSAAQAQYYPPCSPFPLFWPF
Ga0134121_104782212	3300010401	Terrestrial Soil	MRFQRIAIAATIAAGLAGLPLSQAKAQYYPYPCNPFPLFWPFCAAAAVVG
Ga0137389_115082041	3300012096	Vadose Zone Soil	MRIRRIAVSAALTALLAALPLATAKAQYYPPCSPFPLFWPFCVAGAIVGTAATI
Ga0137386_112456492	3300012351	Vadose Zone Soil	MRFQRIAIPAVLVAALAVPFSSAKAQYYYPPPCHPFPLFWPACA
Ga0157374_125815031	3300013296	Miscanthus Rhizosphere	MRFQRIAIAAAIAAGLAGLPLSQAQAQYYPYPCNPFPMF
Ga0182041_100425064	3300016294	Soil	MHIRRITIAAAFGVGLAALPLSTAKAQYYPPCSPFPLEWPFCVVGAVLGTAAMIVT
Ga0182041_114936191	3300016294	Soil	LRIRRITISAAFAAGLAAVPVTTANAQYYYPPCSPFPLFWPFCVVGA
Ga0182041_116428451	3300016294	Soil	MPIRQMAIAAAFAAGLAAVPVSAAQAQYYPPCSPFPL
Ga0182034_100417021	3300016371	Soil	MRIRRIAISAAFAAGLAALSISTAKAQYYPTPCSPFPLSWPF
Ga0182034_119814372	3300016371	Soil	LPIRRIAASAAFVATLAAVPLATASGQSYPPYPPCPPFPLFWPFCVVGAVVGTAATIVAA
Ga0182037_101326563	3300016404	Soil	MPIRQMAIAAAFAAGLAAVPVSAAQAQYYPPCSPFPLFWPFCAGG
Ga0182037_116609631	3300016404	Soil	MRIRRLAISATITAGLAVLPLSVARAQYYYPPCSPFPLFWPFC
Ga0182039_100764323	3300016422	Soil	MRFRQIAVSTAFAAALAAMPVATAKAQYYPPCSPFPLFWPFCVAGAIV
Ga0182039_106367931	3300016422	Soil	MPIRQMAIAAAFASGLAAVPVSAAPAQYYPPCSPFPLFWPFCAAGAVIGTAATIVT
Ga0182038_118585402	3300016445	Soil	MRIRRIAISAAFATGLAALPLSTAKAQYYPPCSPFPLEWPFCVVG
Ga0066662_118457341	3300018468	Grasslands Soil	MRFQRIAIAAAVAAGLATLPFSPAKAQYYPYPCNPFPLFWPFCAAAAIVGGVGAI
Ga0066669_103302591	3300018482	Grasslands Soil	MRFQQIAIPAVLAAGLAALPVSAAKAQPYYPYPYPCNPFPLFWPF
Ga0210407_105980682	3300020579	Soil	MRIRRIAVAVAFAAGLATLPLTTANAQYYPPCSPFPLLWPFCVA
Ga0210403_103538522	3300020580	Soil	MRIRRIAVSAALAAGLAAVPLATAKAQYYPPCSPFPLFWPFCVA
Ga0210401_107956311	3300020583	Soil	MRIRRIAVSAAFAAGLAAVPLATAKAQYYPPCSPFPLFWPFCVAG
Ga0210400_106649061	3300021170	Soil	MRIRRIAVAAAFAFGLAAVPLATAKAQYYPPCSPFPLFWPFCVAGAIVGTAATIVA
Ga0210408_101393843	3300021178	Soil	MRIRRIAVSAAFAAGLAAVPLATAKAQYYPPCSPFPLFWPFCVAGAIVGTAATIVA
Ga0210386_104763791	3300021406	Soil	MRIRQIAVSATFAAGLAALPLATAEAQYYYPPCSPFPLA
Ga0210386_109425611	3300021406	Soil	MRIRRIAVSTVFAALPLATANAQYYPPCSPFPLFWPFCVAG
Ga0210394_117138401	3300021420	Soil	MCIRRIAVSAAFAAGLAALPLATAKAQYYPPCSPFPLFWPFCVAGAIVGTAAT
Ga0210384_119043321	3300021432	Soil	MRIRQIAISAAYATGLAALPIPAAQAQYYPPCSPFPLFWPFCVAGALVGTAATIV
Ga0210409_105666491	3300021559	Soil	MRIRQIAISATFAAALAALPISAAQAQYYPPCSPFPLFWPFCVAGA
Ga0126371_126080782	3300021560	Tropical Forest Soil	MGIRRMAISGVFAAGLAAVPLATATAQYYPPPPCSPFPLFWPFCVAGAVVGT
Ga0242669_10205621	3300022528	Soil	MRIRQIAVLGVFAAGLAALPAANAEAQYYPPYPPPCSPFPLFWP
Ga0207693_103476191	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MCIRRIAVSAAFAAGLAALPLATAKAQYYPPCSPFPLFWPFC
Ga0207693_103836402	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MGIRRIAVSAAFAAGLAALPIATAQAQYYPPQYYYPPCSPF
Ga0207702_105725262	3300026078	Corn Rhizosphere	MRFQRIAIAAAIAAGLAGLPLSQAKAQYYPYPCNPF
Ga0209626_12116541	3300027684	Forest Soil	MRIRRIAVSAAFAAALAAVPLATAKAQYYPPCSPFPLFWPFCVAGA
Ga0209448_102454551	3300027783	Bog Forest Soil	MRIRPIAISVAFAAGLATLPLSTAEAQSYPYPPCPSFPLFWPFCV
Ga0209656_102807211	3300027812	Bog Forest Soil	MRIRRIAVSAAFAAGLAALPLATAKAQYYPPQYYPPCSPFPLFWPFCVAGAIVGAAATI
Ga0209773_102510491	3300027829	Bog Forest Soil	MRIRRFMISAAFAAGLATLPLSTAEAQYYPPCSPFPLAW
Ga0209166_105978062	3300027857	Surface Soil	MQIRPIAISALFAAGLAALPLSNAEAQYYSPLCNPFP
Ga0209624_107706391	3300027895	Forest Soil	MRIGRIALLTALAFAAAPLSRATAQYYYPPCSPFPL
Ga0209526_103504412	3300028047	Forest Soil	MRIRRIAVSAAFAAALAAVPLATAKAQYYPPCSPFPLFWPFCVAGAIVGT
Ga0311354_104739312	3300030618	Palsa	MLLRRIAILAAFAAGLATVPFSATAQYYYPPCSPFPLAWP
Ga0318538_100760593	3300031546	Soil	MISAAFGAGLAALPLSTAKAQYYYPPCSPFPLFWPFC
Ga0318528_106123821	3300031561	Soil	MPIRRNTISAAFAVGLASLPLSTANAQYYPPCSPFPLFWPFCVAGAVVATAATFQ
Ga0310915_100667073	3300031573	Soil	MISAAFGAGLAALPLSTAKAQYYYPPCSPFPLFWPFCVADAVVGTPR
Ga0318572_102234911	3300031681	Soil	MPIRGIMISAAFGAGLAALPLSTAKAQYYYPPCSPFPLFWPFCVADAVVGTPR
Ga0318560_105168522	3300031682	Soil	MPIRGIMISAAFGAGLAALPLSTAKAQYHYPPCSPFPLFWPFCEADAVVGTSR
Ga0318560_107042051	3300031682	Soil	MRIRQSAISAAYATGLAVLPIPAAQAQYYPPCSPFPLFWPFCVAGALVGTAATIV
Ga0310686_1056371291	3300031708	Soil	MRIRQVAVSAAFAAGLAAVPLATAEAQYYYPPCSPFPLSWPFCVAGA
Ga0306917_111935881	3300031719	Soil	MPIRRNTISAALAVGLASLPLSTASAQYYPPCSPFPLFWPFCVAGAVVGAAA
Ga0307469_125094762	3300031720	Hardwood Forest Soil	MRIRRIAVSAAFAAGLAALPLATAKAQYYPPCSPFPLFWPFCVAG
Ga0306918_106365543	3300031744	Soil	MRIRQIAISAAYATGLAVLPIPAAQAQYYPPCSPFPLFWPFCVA
Ga0318537_102519812	3300031763	Soil	MRIRRSAISAAFATGLAALPLSTAKAQYYPPCSPFPLEWPFCVVGAVVGTAAMII
Ga0318543_103973311	3300031777	Soil	MRFRQIAVSTAFAAALAAMPVATAKAQYYPPCSPFP
Ga0318543_104766542	3300031777	Soil	MRIRRISVSAAFAAGLAALPLATAEAQYYPPCSPFPLFWPFCV
Ga0318503_101874371	3300031794	Soil	MHIRRITIAAAFGVGLAALPLSTAKAQYYPPCSPFLLE
Ga0318550_102525572	3300031797	Soil	MRFRQIAVSTAFAAALAAMPVATAKAQYYPPCSPFPLFWPF
Ga0318550_105379871	3300031797	Soil	MRIRRLAISATIAAGLAVLPLSVARAQYYYPPCSPFPLFWPFC
Ga0318523_100791653	3300031798	Soil	MPIRGIMISAAFGAGLAALPLSTAKAQYYYPPCSPFPLFWPFCEADAV
Ga0318497_104550341	3300031805	Soil	MRFRQIVVSTAFAAGLAAVPVATAKAQYYYPPCSPFPLFWPFCVAAVPT
Ga0318497_108824192	3300031805	Soil	MRIRRIAISAAFAAGLATLSISTAKAQYYPPPCSPFPLSWPFCVVGAVI
Ga0318567_104554791	3300031821	Soil	MISAAFGAGLAALPLSTAKAQYHYPPCSPFPLFWPFCEADAVVGTSR
Ga0310917_100149366	3300031833	Soil	MRFRQIAVSTAFAAALAAMPVATAKAQYYPPCSPFPLFWPFCVAGAIVGTAATIVVA
Ga0318517_104906771	3300031835	Soil	MRIRRIAISAAFATGLAALPLSTTKAQYYPPCSPFPLE
Ga0318511_102393931	3300031845	Soil	MYIRRITIAGAYGVGLAALSFSTAEAQYYPPCSPFPLE
Ga0318511_106336482	3300031845	Soil	MRIRQIAISAAYATGLAVLPIPAAQAQYYPPCSPFPLFWPFCVAGALVGTA
Ga0318495_100939642	3300031860	Soil	MHIRRITIAAAFGVGLAALPLSTAKAQYYPPCSPFPLEWPFCVEALSSAPPQ
Ga0306919_110960232	3300031879	Soil	MYIRRITIAGAYGVGLAALSFSTAEAQYYPPCSPFPL
Ga0306925_115294102	3300031890	Soil	MPIRQMAIAAAFAAGLAAVPVSAAQAQYYPPCSPFPLF
Ga0318551_100473981	3300031896	Soil	MPIRGIMISAAFGAGLAALPLSTAKAQYYYPPCSPFPLFWPFCVA
Ga0318520_100420951	3300031897	Soil	MRFRQIAVSTAFAAALAAMPVATAKAQYYPPCSPFPLFWPFCV
Ga0306921_105379094	3300031912	Soil	MRTRRIAVSAVFAAGLAALPLATAKAQYYPPCSPFPLFWPFCVAGAIVGT
Ga0306921_117450001	3300031912	Soil	MPIRQMAIAAAFAAGLAAVPVSAAQAQYYPPCSPFPLFWPFCAAGA
Ga0306921_120552801	3300031912	Soil	MPIRRNTISAAFAVGLASLPLSTASAQYYPPCSPFPLFWPFCVAGAVVGTAAPFV
Ga0310912_113366631	3300031941	Soil	MPIRRNTISAAFAVGLASLPLSTANAQYYPPCSPF
Ga0310913_107431351	3300031945	Soil	MSIRRIMIAGAFGVGLAAPPLSTAKAQYYPACSPFPLEWPFCAVGAVLAPQ
Ga0310913_109660391	3300031945	Soil	MCIRRIMIAGAFGVGLAALPLSTAKAQYYPACSPFPLEWPFCAVGAVLGTAAMIITA
Ga0310910_106796812	3300031946	Soil	MPIRQMAIAAAFAAGLAAVPVSAAQAQYYPPCSPFPLFWPFCA
Ga0310910_111571732	3300031946	Soil	MCIRRIMIAGAFGVGLAALPLSTAKAQYYPACSPFPLEWPFCAVGAVLGTAAMIIT
Ga0306926_115733252	3300031954	Soil	MPIRRNTISAAFAAGLASLPLSTANAQYYPPCSPFPLFW
Ga0310911_109228602	3300032035	Soil	MRIRQIAISAAYATGLAVLPIPAAQAQYYPPCSPFPLFWPFCVAGA
Ga0318558_103551111	3300032044	Soil	MRIRRSAISAAFATGLAALPLSTAKAQYYPPCSPFPLEWPFCVVGAV
Ga0318570_104894262	3300032054	Soil	MRIRRISVSAAFAAGLAALPLATAEAQYYPPCSPFPLFWPF
Ga0306924_103999591	3300032076	Soil	MISAAFGAGLAALPLSTAKAQYYYPPCSPFPLFWPF
Ga0306924_106619981	3300032076	Soil	MRFRQIAVSTAFAAALAAMPVATAKAQYYPPCSPFPLLW
Ga0306924_113580082	3300032076	Soil	MPIRQMAIAAAFAAGLAAVPVSAAQAQYYPPCSPFP
Ga0306924_119686261	3300032076	Soil	MRIRRIAISAAFATGLAALPLSTAKAQYYPACSPFPLEWPFCAVGAVLAPQP
Ga0306920_1015665991	3300032261	Soil	MRTRRIAVSAVFAAGLAALPLATAKAQYYPPCSPFPLFWPFCVAGAIVGTAATIVAA
Ga0335073_108365742	3300033134	Soil	MAVRQIAISAAFAAGLAAVPLASASAQYYPPPPCSPFPLFWPFC
Ga0310914_106453282	3300033289	Soil	MRIRRIAISAAFATGLAALPLSTTKAQYYPPCSPFPLEWPFCVVGAVVGTAAMIVT
Ga0310914_118948722	3300033289	Soil	LRLRRIPISVAFAAGLAAVPLATANAQYYPPCSPFPLFWPFCVV
Ga0318519_109073141	3300033290	Soil	MPIRQMAIAAAFAAGLAAVPVSAAQAQYYPPCSPFPLFWPFCAGGALVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068043

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences