Metagenome / Metatranscriptome Family F068057

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068057
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	54 residues
Representative Sequence	MRPRDRDNVNLTLIALTCALLMVLPLVTTFDDLLTAWAMQLGANNPLQSIVP
Number of Associated Samples	103
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.89 %
% of genes near scaffold ends (potentially truncated)	92.80 %
% of genes from short scaffolds (< 2000 bps)	90.40 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.600 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (24.000 % of family members)
Environment Ontology (ENVO)	Unclassified (36.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.200 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.25% β-sheet: 0.00% Coil/Unstructured: 48.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13632	Glyco_trans_2_3	4.80
PF13641	Glyco_tranf_2_3	1.60
PF12728	HTH_17	0.80
PF00126	HTH_1	0.80
PF00563	EAL	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.80
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.80
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.80
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.60 %
Unclassified	root	N/A	6.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.60 %
Unclassified	root	N/A	6.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.60 %
Unclassified	root	N/A	6.40 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.80 %
Unclassified	root	N/A	6.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	80.00 %
Unclassified	root	N/A	6.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	80.00 %
Unclassified	root	N/A	6.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	80.00 %
Unclassified	root	N/A	6.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_61202_len_2905_cov_15_565921	All Organisms → cellular organisms → Bacteria	2955	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig36092	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300000880\|AL20A1W_1363749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	670	Open in IMG/M
3300000887\|AL16A1W_10266115	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300001538\|A10PFW1_10409008	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300001538\|A10PFW1_12420200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	887	Open in IMG/M
3300001661\|JGI12053J15887_10593678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	527	Open in IMG/M
3300002914\|JGI25617J43924_10015386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2580	Open in IMG/M
3300002914\|JGI25617J43924_10108113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	989	Open in IMG/M
3300005171\|Ga0066677_10017985	All Organisms → cellular organisms → Bacteria	3215	Open in IMG/M
3300005171\|Ga0066677_10556756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	655	Open in IMG/M
3300005177\|Ga0066690_10232306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1234	Open in IMG/M
3300005180\|Ga0066685_10120403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1767	Open in IMG/M
3300005180\|Ga0066685_10122775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1750	Open in IMG/M
3300005180\|Ga0066685_10478137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	864	Open in IMG/M
3300005336\|Ga0070680_100764160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	832	Open in IMG/M
3300005363\|Ga0008090_12760677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	521	Open in IMG/M
3300005406\|Ga0070703_10580420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300005440\|Ga0070705_100797591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	751	Open in IMG/M
3300005445\|Ga0070708_100453115	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300005445\|Ga0070708_101771340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300005445\|Ga0070708_102152061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300005445\|Ga0070708_102152062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300005454\|Ga0066687_10376117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	817	Open in IMG/M
3300005467\|Ga0070706_101142647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	716	Open in IMG/M
3300005468\|Ga0070707_100192563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1988	Open in IMG/M
3300005468\|Ga0070707_101554545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	628	Open in IMG/M
3300005536\|Ga0070697_100236517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1559	Open in IMG/M
3300005540\|Ga0066697_10721511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300005554\|Ga0066661_10343802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	914	Open in IMG/M
3300005557\|Ga0066704_10469955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	830	Open in IMG/M
3300005557\|Ga0066704_10807022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	583	Open in IMG/M
3300005558\|Ga0066698_11016001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	526	Open in IMG/M
3300005561\|Ga0066699_10931469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	605	Open in IMG/M
3300005568\|Ga0066703_10600150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	641	Open in IMG/M
3300005569\|Ga0066705_10626604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	657	Open in IMG/M
3300005586\|Ga0066691_10730450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300005587\|Ga0066654_10890340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
3300006173\|Ga0070716_100452355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	936	Open in IMG/M
3300006755\|Ga0079222_10750233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	785	Open in IMG/M
3300006796\|Ga0066665_10008229	All Organisms → cellular organisms → Bacteria	5880	Open in IMG/M
3300006806\|Ga0079220_11027371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	658	Open in IMG/M
3300006903\|Ga0075426_11235947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	567	Open in IMG/M
3300006914\|Ga0075436_100829403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	689	Open in IMG/M
3300007255\|Ga0099791_10425551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	641	Open in IMG/M
3300009012\|Ga0066710_104430032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300009029\|Ga0066793_10430635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	756	Open in IMG/M
3300009038\|Ga0099829_10533225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	975	Open in IMG/M
3300009088\|Ga0099830_10769532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	794	Open in IMG/M
3300009088\|Ga0099830_10790466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	783	Open in IMG/M
3300009089\|Ga0099828_11228053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	664	Open in IMG/M
3300009089\|Ga0099828_11261332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	654	Open in IMG/M
3300009090\|Ga0099827_11024448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	716	Open in IMG/M
3300009090\|Ga0099827_11422104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	604	Open in IMG/M
3300009137\|Ga0066709_100602082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1566	Open in IMG/M
3300010323\|Ga0134086_10416641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300010325\|Ga0134064_10203337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	712	Open in IMG/M
3300010337\|Ga0134062_10083424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1351	Open in IMG/M
3300011271\|Ga0137393_11186312	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300011996\|Ga0120156_1016248	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300012189\|Ga0137388_10272510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1545	Open in IMG/M
3300012200\|Ga0137382_10511719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	853	Open in IMG/M
3300012200\|Ga0137382_11008583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	597	Open in IMG/M
3300012205\|Ga0137362_10838477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	787	Open in IMG/M
3300012206\|Ga0137380_10248352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1604	Open in IMG/M
3300012356\|Ga0137371_11349818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300012359\|Ga0137385_10519573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1006	Open in IMG/M
3300012359\|Ga0137385_10570229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	953	Open in IMG/M
3300012918\|Ga0137396_10606805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	809	Open in IMG/M
3300012922\|Ga0137394_11565775	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300013501\|Ga0120154_1079213	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300014052\|Ga0120109_1172954	All Organisms → cellular organisms → Bacteria → Terrabacteria group	505	Open in IMG/M
3300014056\|Ga0120125_1026590	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300014058\|Ga0120149_1233317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	516	Open in IMG/M
3300014154\|Ga0134075_10538840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	526	Open in IMG/M
3300017654\|Ga0134069_1157307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	761	Open in IMG/M
3300018433\|Ga0066667_10306055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1239	Open in IMG/M
3300018433\|Ga0066667_12350010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300021479\|Ga0210410_10471117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1123	Open in IMG/M
3300021559\|Ga0210409_11463210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	559	Open in IMG/M
3300025544\|Ga0208078_1106215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	566	Open in IMG/M
3300025885\|Ga0207653_10284307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	639	Open in IMG/M
3300025906\|Ga0207699_11458557	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300025917\|Ga0207660_10910462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	718	Open in IMG/M
3300025939\|Ga0207665_10464579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	973	Open in IMG/M
3300026297\|Ga0209237_1195297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	659	Open in IMG/M
3300026297\|Ga0209237_1201972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300026300\|Ga0209027_1043070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1700	Open in IMG/M
3300026301\|Ga0209238_1229954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	548	Open in IMG/M
3300026322\|Ga0209687_1158467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	726	Open in IMG/M
3300026327\|Ga0209266_1280927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300026331\|Ga0209267_1303763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	530	Open in IMG/M
3300026332\|Ga0209803_1165645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	843	Open in IMG/M
3300026333\|Ga0209158_1147118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	864	Open in IMG/M
3300026334\|Ga0209377_1138369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	945	Open in IMG/M
3300026524\|Ga0209690_1301366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	508	Open in IMG/M
3300026527\|Ga0209059_1116047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1037	Open in IMG/M
3300026529\|Ga0209806_1279177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	561	Open in IMG/M
3300026538\|Ga0209056_10250399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1259	Open in IMG/M
3300026540\|Ga0209376_1219356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	845	Open in IMG/M
3300027383\|Ga0209213_1044815	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300027667\|Ga0209009_1163575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	566	Open in IMG/M
3300027678\|Ga0209011_1181068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	582	Open in IMG/M
3300027681\|Ga0208991_1244700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300027748\|Ga0209689_1198664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	882	Open in IMG/M
3300027765\|Ga0209073_10363627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300027842\|Ga0209580_10447765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	644	Open in IMG/M
3300027882\|Ga0209590_10318812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	999	Open in IMG/M
3300027882\|Ga0209590_10713183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	641	Open in IMG/M
3300027986\|Ga0209168_10098592	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300028536\|Ga0137415_10783275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	764	Open in IMG/M
3300031421\|Ga0308194_10391238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	505	Open in IMG/M
3300031670\|Ga0307374_10616876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300031720\|Ga0307469_10800316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	865	Open in IMG/M
3300031754\|Ga0307475_11343810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
3300032174\|Ga0307470_10466032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	913	Open in IMG/M
3300032205\|Ga0307472_102649111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.40%
Host-Associated	Host-Associated	1.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.40%
Plants	Host-Associated → Plants	1.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.00%
Loam	Environmental → Terrestrial → Soil → Loam	20.00%
Clay	Environmental → Terrestrial → Soil → Clay	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.80%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.40%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	10.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.40%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.60%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.60%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	24.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	8.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.40%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.60%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.60%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.80%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.80%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_00862090	2088090004	Soil	MKVRDRDNLNLTLLAIVCALLMVLPLVTTFDDLLTTWALQLGANNPLQTIVPVEARMVVGLLGL
P3_CLC_02600680	2124908041	Soil	MTRQDRDGLNMTLIAITCALLMLLPFVTTFDDLLTSWALALGANNPLQSIVPVEAR
AL20A1W_13637492	3300000880	Permafrost	MNRQDRDGLNMSLIAITCALLMLLPFVTTFDDLLTTWALALGANNPLQGIVPIEARMVVGLLG
AL16A1W_102661152	3300000887	Permafrost	MNQQDRDGLNMTLIAITCALLMLLPFVTTFDDLLTSWALALGANNPLQGIVPIEARMVVG
A10PFW1_104090081	3300001538	Permafrost	MRRQDRDALNITLIAVTCALLMLLPFVTTFDDLLTSWALALGANNPLQGIVPIEARM
A10PFW1_124202001	3300001538	Permafrost	MSRQDRDGLNMTLIAITCALLMLLPFVTTFDDLLTSWALALGANNPLQGIVPVEARMVV
JGI12053J15887_105936782	3300001661	Forest Soil	VKARDRDNLNLTLLALLCALLMLLPLVTTFDDLLTAWAMQLGANSPMQS
JGI25617J43924_100153861	3300002914	Grasslands Soil	MRRTDRDALNMTLLAMGCALLMLLPLVTTFDDFLTSWALQLGANNPLQSIVPVEARM
JGI25617J43924_101081132	3300002914	Grasslands Soil	MRRTDRDALNMTLLAMGCALLMLLPLVTTFDDFLTSWALQLGVNNPLQSIVPVEARMVVS
Ga0066677_100179851	3300005171	Soil	MKTRQRDDVNLTLIALTCALLMVLPLVTTFDELLTTWAMRLGADNPLQAIVPVEARMVVS
Ga0066677_105567561	3300005171	Soil	MRRQERDALNMTLVALACALLMVLPLITTFDDLLTAWALQLGVNNPLQAIVPVESRMVVGLLSAVGIKAAA
Ga0066690_102323061	3300005177	Soil	VKTNDRDNINLTLIALTCAMLMVLPLVTTFDDLLTSWAMQLGANNP
Ga0066685_101204032	3300005180	Soil	VRTRESDNVNLTLIALTCALLMVLPLVTTFDDLLTSLAMGLGANNPLQAIVPVESR
Ga0066685_101227751	3300005180	Soil	MRTRERDVNLTLIALTCALLMVLPLVTTFDDLLTAWAMGLGANNPLQAIVP
Ga0066685_104781372	3300005180	Soil	MRKQERDALNMTLVALACALLMVLPLVTTFDDLLTAWALQLGVNNPLQAIVPVESRMIVGLLSA
Ga0070680_1007641601	3300005336	Corn Rhizosphere	MTRQDRDALNMTLIAISCGLLMLLPLVTTFDELLTSWALQLGVNNPLQAIVP
Ga0008090_127606771	3300005363	Tropical Rainforest Soil	VKAGERDNVNLTLIALACGLLMVLPLVTTFDELLTAWAMQLGANNPLQG
Ga0070703_105804202	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VIKRERDTVNLTVIAITCALLMLLPLVTTFNDLLTVWAIGLGANN
Ga0070705_1007975912	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MNTRDRDNLNLTLLAILCALLMLLPLVTTFDDFLTTWALQLGANNP
Ga0070708_1004531151	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VRRSDRDAVNMTLIALACALLVILPLVTTFDDLLTTWAMQLGVDNPLQAIVP
Ga0070708_1017713402	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKRQDREALNMTLLAMSCALLMLLPLVTTFDDLLTSWALALGANNPLQSVVPVEA
Ga0070708_1021520611	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLAMSCALLMLLPLVTTFDDFLTSWALQLGANNPLQSIVPVEARMVVSLLG
Ga0070708_1021520621	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRRTDRDALNMSLLAMSCALLMLLPLVTTFDDFLTSWALQLGANNPLQSIVPVEARMVVSLLG
Ga0066687_103761171	3300005454	Soil	MRRQERDALNMTLVALACALLMVLPLVTTFDDLLSAWALQLGVNNPLQAIVPVEPRMVVGLLSAV
Ga0070706_1011426472	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VRNRERDNVNMTLIALTCAMLMLLPLVTTFNDLLTSWAMGLGA
Ga0070707_1001925631	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLAMSCALLMLLPLVTTFDDLLTSWALALGANNPLQSVVPVEARM
Ga0070707_1015545451	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTLLAMSCALLMLLPLVTTLDDFLTSWALQLGANNPLQSIVPVEARMVVSLLGLIGV
Ga0070707_1019902912	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKRQDREALNMTLLAMSCALLMLLPLVTTFDDLLTSWALALGANNP
Ga0070697_1002365172	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRRQERDALNMTLIALACALLMVLPLVTTFDDFLTSWALQLGADNPLQAVVPTEARMVV
Ga0066697_107215112	3300005540	Soil	MRKQERDALNMTLIALACALLMVLPLVTTFDDLLTAWALQLGVNNPLQAIVPVESRMV
Ga0066661_103438022	3300005554	Soil	MRPRDRDNVNLTLIALTCALLMVLPLVTTFDDLLTAWAMQLGANNPLQSIVPTESRMVVSLLGVAGIH
Ga0066704_104699551	3300005557	Soil	VRTRESDNVNLTLIALTCALLMVLPLVTTFDDLLTSLAMGLGANNPLQAIVPVESRMVV
Ga0066704_108070221	3300005557	Soil	MKTRDRDNINLTLIALTCAMLMLLPLVTTFDDLLTTWAMQLGANNPLQAIVPAES
Ga0066698_104774272	3300005558	Soil	MTRHDRDAMNMTLVAITCALLMLLPLVTTFDDLLTSWALQLGANN
Ga0066698_110160011	3300005558	Soil	MKTRGRDVNLTLIALTCALLMVLPLVTTFDDLLTAWAMGLGANNPLQAIV
Ga0066699_109314691	3300005561	Soil	MRRPERDALNMTLVALACALLMVLPLITTFDDLLSAWALQLGVNNPLQAIVPVES
Ga0066703_106001502	3300005568	Soil	VRTRESDNVNLTLIALTCALLMVLPLVTTFDDLLTSLAMGLGANNPLQA
Ga0066705_106266042	3300005569	Soil	VTTRERDNVNLTLIAITCALLMLLPLVTTFDELLTAWAMGLGANNP
Ga0066691_107304501	3300005586	Soil	MKPQERDALRMTLIAIACALLMVLPLVTTFDDLLTVWALQLGAGNPLQAIVPV
Ga0066654_108903401	3300005587	Soil	VRTGERDNVNLTLIAITCALLMVLPLVTTFDDLLTTWAMQLGANNPLQA
Ga0070717_107801442	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VRRPERDALNMTLIALACALLMVLPLVTTFDDFLTTWALQLGANN
Ga0070716_1004523551	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKRRERDLNVTLLAMACALLMLLPLVTTFDDLLTTWALQLGANNPLQAIVPVEARMVV
Ga0079222_107502331	3300006755	Agricultural Soil	MSEVRRDNNLVLIAMACALLMVLPLVTTFNDLLTTFALGLGANNPLQAIV
Ga0066665_100082295	3300006796	Soil	MKTRQRDDVNLTLIALTCALLMVLPLVTTFDELLTTWAMRLGADNPLQAIVPVEAR
Ga0079220_110273712	3300006806	Agricultural Soil	MSEVRRDNNLVLIAMACALLMVLPLVTTFNDLLTTFALGLGANNPLQAIVPA
Ga0075426_112359471	3300006903	Populus Rhizosphere	VRRQERGALNMTLIALACALLMVLPLVTTFDDFLTSWALQLGANNPLQA
Ga0075436_1008294031	3300006914	Populus Rhizosphere	MKAREHDVNLTLIALSCGLLIVLPLVTTFDDLLTAWAMGLGANNPLQAIVPAESRMVV
Ga0099791_104255511	3300007255	Vadose Zone Soil	MKTGERDSVNLTLIALTCALLMLLPLVTTFDDLLTMWAMQLGADSPLQAIVP
Ga0066710_1044300322	3300009012	Grasslands Soil	MKRRDGDALNMTLLATGCALLMLLPLVTTFDDFLTTWALELGVDNPLQSIVPVE
Ga0066793_104306352	3300009029	Prmafrost Soil	MSTRDRDNLNLTLLAVVCALLMLLPLVTTFDDLLTTWALQLGANNPLQS
Ga0099829_105332252	3300009038	Vadose Zone Soil	MRRTDRDALNMTLLAMGCALLMLLPLVTTFDDFLTSWALQLGANNPLQSIVPVEARMVVSLLGLI
Ga0099830_107695323	3300009088	Vadose Zone Soil	VKRQDREALNMTLLAMSCALLMLLPLVTTFDDLLTSWALALGANNPLQSVVPA
Ga0099830_107904661	3300009088	Vadose Zone Soil	MKRRDRDALNMTLLAISCALLMLLPLVTTFDDFLTSWALQLGADNPLQSI
Ga0099830_113426272	3300009088	Vadose Zone Soil	MKRQDRDALNMTLVAMGCALLMLLPLVTTFDDFLTSWALQLGAN
Ga0099828_112280532	3300009089	Vadose Zone Soil	MRRQERDALNMTLIALACALLMVLPLVTTFDDLLTAWALQLGVNNPLQAIVPVESRMVV
Ga0099828_112613322	3300009089	Vadose Zone Soil	MKRQDRDALNMTLVAMGCALLMLLPLVTTFDDFLTSWALQLGANNPLQSIVPVEARMVVS
Ga0099827_110244483	3300009090	Vadose Zone Soil	LRTRERDNVNLTLIALTCALLMVLPLVTTFDDLLTTWAMGLGANNPLQSI
Ga0099827_114221042	3300009090	Vadose Zone Soil	VKRQDREALNMTLLAMSCALLMLLPLVTTFDDLLTSWALALGANNPLQS
Ga0066709_1006020822	3300009137	Grasslands Soil	MKTSERDNINLTLIALTCAMLMLLPLVTTFDDLLTAWAMQLGANNPLQAIVPAESRMVVSLLGL
Ga0134086_104166412	3300010323	Grasslands Soil	MRTRERDVNLTLIALTCALLMVLPLVTTFDDLLTAWAMGLGANN
Ga0134064_102033373	3300010325	Grasslands Soil	VRTGERDNVNLTLIAITCALLMVLPLVTTFDDLLTTWAMQLGAN
Ga0134062_100834241	3300010337	Grasslands Soil	MRKQERDALNMTLIALACALLMVLPLVTTFDDLLTAWALQLGVNNPLQAIVPVESRMVVGLLS
Ga0137393_111863123	3300011271	Vadose Zone Soil	MKRQERDALRMTLIAIACALLMVLPLVTTFDELLTVWALQLGAGNPLQA
Ga0120146_10633801	3300011992	Permafrost	MRRQDRDALNITLIAVTCALLMLLPFVTTFDDLLTSWALELGANN
Ga0120156_10162482	3300011996	Permafrost	MRRQDRDALNMTLIAITCALLMLLPFVTTFDDLLTSWALALGANNPLQGIVPIEARMVVGLLGVVG
Ga0137388_102725102	3300012189	Vadose Zone Soil	VRARDRDNVNLTLIALTCALLMVLPLVTTFDDLLTAWAMQLGANNPLQAIVPVESRMVVSLLGLVG
Ga0137382_105117191	3300012200	Vadose Zone Soil	MRTRERDNVNLTLIVLSCALLMVLPLVTTFDDLLTAWAMSLGANNPLQSIVPVES
Ga0137382_110085832	3300012200	Vadose Zone Soil	MRTRERDNVNLTLIALSCALLMVLPLVTTFDDLLTAWAMSLGANNPLQSIVPVES
Ga0137399_108812343	3300012203	Vadose Zone Soil	MNTRDRDNLNLTLLAILCALLMLLPLVTTFDDFLTTWALQFGAN
Ga0137362_108384771	3300012205	Vadose Zone Soil	MKTRPRDDVNLTVIALACALLMVLPLVTTFDELLTTWALRLGANNPLQAIVPVEARMVVSLLGL
Ga0137380_102483523	3300012206	Vadose Zone Soil	MRSRERDGVNLTVIALACALLMVLPLVTTFNELLTTWVMAMGANNPLQAMVPVEARMVVSMLSLAGV
Ga0137371_113498181	3300012356	Vadose Zone Soil	MTLIALACALLMILPLVTTFDDLLTAWALQLGVNNPLQAIVPV
Ga0137385_105195732	3300012359	Vadose Zone Soil	MKRTERDSVKLTLLAASCALLMLLPLVTTFDDFLTSWALQLGVDNPLQSIVPVEAQ
Ga0137385_105702292	3300012359	Vadose Zone Soil	MNAPRRESTNLTVIAIACALLMVLPLVTTFDELLTMWAMQLGADNPLQAIVP
Ga0137396_106068052	3300012918	Vadose Zone Soil	MKTRPRDDVNLTLIALTCALLMVLPLVTTFDELLTTWAMRLGADNPLQAIVPVEAR
Ga0137394_115657751	3300012922	Vadose Zone Soil	MNRHDRDALNMTLIAITCALLMLLPFVTTFDDLLTSWALALGANNPLQSIVPIESRMVVG
Ga0120154_10792131	3300013501	Permafrost	MSRTDRDGLNMTLIAITCALLMLLPFVTTFDDLLTTWALALGANNPLQGIVPIEARMVVG
Ga0120109_11729541	3300014052	Permafrost	MRTRDRDNLNLTLLALLCALLMLLPLVTTFDDLLTAWAMGLGANNPLQTIVPVEARMV
Ga0120125_10265901	3300014056	Permafrost	MRSQDRDALNMTLVAMTCALLMLLPFVTTFDDLLTTWALQLGANNPLQG
Ga0120149_12333171	3300014058	Permafrost	MSRQDRDGLNMTLIAITCALLMLLPFVTTFDDLLTSWALALGANNPLQGIVPVEARMV
Ga0134075_105388402	3300014154	Grasslands Soil	VRTGERDNVNLTLIAITCALLMVLPLVTTFDDLLTAWAMQLGANNPLQAIV
Ga0134069_11573071	3300017654	Grasslands Soil	MRTRERDVNLTLIALTCALLMVLPLVTTFDDLLTAWAMGLGANNPLQAIVPAES
Ga0066667_103060552	3300018433	Grasslands Soil	MRKQERDALNMTLIALACALLMVLPLVTTFDDLLTAWALQLGVNNPLQAIVPVESRMVVG
Ga0066667_123500102	3300018433	Grasslands Soil	MTSVRRDHNLTLIALTCALLMVLPLVTTFNDLLTTWAMQLGANNPLQAIVPGEARMVVSLLGLAG
Ga0210410_104711171	3300021479	Soil	MKIRERDLNLTLLALMCGLLMLLPLVTTFNDLLTTWAMQLGANNPLQAIVPTEAR
Ga0210409_114632101	3300021559	Soil	MKARDNVNLTIIALACALLMLLPLVTTFDDLLAAWAMQLGADNPLQAIVP
Ga0208078_11062152	3300025544	Arctic Peat Soil	MSRHDRDALNMTLVAMTCALLLVLPFVTTFNDLLTTWALQLGANNPLQGIVPVEARM
Ga0207653_102843072	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VIKRERDTVNLTVIAITCALLMLLPLVTTFNDLLTVWAIGLGANNPLRLRLLAMI
Ga0207699_114585572	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRRQDRDALNMTLIAITCALLMLLPFVTTFDDLLTSWALALGANNP
Ga0207660_109104622	3300025917	Corn Rhizosphere	MTRQDRDALNMTLIAISCGLLMLLPLVTTFDELLTSWALQLGVNNPLQAIVPGE
Ga0207665_104645791	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKRRERDLNVTLLAMACALLMLLPLVTTFDDLLTTWALQLGANNPLQAIVPVEARMVVGL
Ga0209237_11952972	3300026297	Grasslands Soil	MRTRQRDDVNLTLIALACALLMVLPLVTTFDELLTSWAMRLGAD
Ga0209237_12019721	3300026297	Grasslands Soil	VRTRERDNVNLTLIALTCALLMVLPLVTTFDDLLTSLAMGLGANNPLQA
Ga0209027_10430701	3300026300	Grasslands Soil	MKTRQRDDVNLTLIALTCALLMVLPLVTTFDELLTTWAMRLGADKIATGHYARVR
Ga0209238_12299542	3300026301	Grasslands Soil	VRTRESDNVNLTLIALTCALLMVLPLVTTFDDLLTSLAMGLGANNPLQAIVPVESRMVVRMLGLL
Ga0209687_11584672	3300026322	Soil	VTTRERDNVNLTLIAITCALLMLLPLVTTFDELLTAWAMGLGANNPL
Ga0209266_12809272	3300026327	Soil	MRKQERDALNMTLIALACALLMVLPLVTTFDDLLTAWALQLGVNNPLQAIVPVESR
Ga0209267_13037632	3300026331	Soil	MRKQERDALNMTLIALACALLMVLPLVTTFDDLLTAWALQLGVNNPLQAIVPVESRMVVGLL
Ga0209803_11656451	3300026332	Soil	VNPRERDNVNLTLIALTCALLMVLPLVTTFDDLLTAWAMQMGADNPLQAIVPVEARMVVSLLGLAG
Ga0209158_11471182	3300026333	Soil	MRPRDRDNVNLTLIALTCALLMVLPLVTTFDDLLTAWAMQLGANNPLQSIVP
Ga0209377_11383691	3300026334	Soil	MRARQRDDVNLTLIALACALLMVLPLVTTFDELLTSWAMRLGADNPLQ
Ga0209690_13013662	3300026524	Soil	MRSRERDGVNLTVIALACALLMVLPLVTTFNELLTTWVLAMGANNPLQAMVPVEAR
Ga0209059_11160471	3300026527	Soil	MKTRQRDDVNLTLIALTCALLMVLPLVTTFDELLTTWAMRLGADNPLQAIVPV
Ga0209806_12791771	3300026529	Soil	VRTRESDNVNLTLIALTCALLMVLPLVTTFDDLLTSLAMGLGANNPLQAI
Ga0209056_102503991	3300026538	Soil	MKTRQRDDVNLTLIALTCALLMVLPLVTTFDELLTTWAMRLGADNPLQAIVPVEARMGVS
Ga0209376_12193561	3300026540	Soil	MGDPMRKQERDALNMTLVALACALLMVLPLVTTFDDLLTAWALQLGVNNPLQAIVPVESR
Ga0209161_100241445	3300026548	Soil	MRRRDRDNVNLTLIALTCALLMVLPLVTTFDDLLTAWAMQLGAN
Ga0209213_10448151	3300027383	Forest Soil	MTRGNRGALNMTLLAVSCGLLMVMPLVTTLNDFLTTWALQFGADNPLQAIVPGEARMVVGLLGL
Ga0209009_11635752	3300027667	Forest Soil	MKRLDRDALNMTLVAMTCALLMLLPFVTTFDELLTTWALQLGANNP
Ga0209011_11810681	3300027678	Forest Soil	VKTGRRDVNLTLLAIACALLMLLPLVTTFDDLLTTWALQLGADNPLQTIVP
Ga0208991_12447001	3300027681	Forest Soil	VKARDRDNLNLTLLALLCALLMLLPLVTTFDDLLTAWAMQLGVNSPMQSIVPAEARMVVGLLGL
Ga0209689_11986642	3300027748	Soil	MRPRDRDNVNLTLIALTCALLMVLPLVTTFDDLLTAWAMQLGA
Ga0209073_103636272	3300027765	Agricultural Soil	MSEVRRDNNLVLIAMACALLMVLPLVTTFNDLLTTFALGLGANNPLQAI
Ga0209580_104477651	3300027842	Surface Soil	MTARDRDGVNLTLIALTCALLMVLPLVTTFNDLLTTWAMQLGA
Ga0209590_103188121	3300027882	Vadose Zone Soil	VKRQDRGALNMTLLAMSCALLMLLPLVTAFDEFLTTLALQLGVNNPLQSIVPIEARMVVSLLGLVGVK
Ga0209590_107131831	3300027882	Vadose Zone Soil	MRRTDRDALNMTLLAMGCALLMLLPLVTTFDDFLTSWALQLGANNPLQSIVP
Ga0209168_100985923	3300027986	Surface Soil	MTRQERGALNMTLIAIACALLMVLPLVTTFDDFLTGWAMQLGANSPLQALVPAEARMV
Ga0137415_107832751	3300028536	Vadose Zone Soil	VNTRDRGNLNLTLLAMLCALLMLLPLVTTFDEFLTTWALQFGANNPLQAIVPVEAR
Ga0308194_103912381	3300031421	Soil	LRTQDRDALNMTLVAITCALLMVLPFVTTFDDLLTTWALQLGANNPLQGIVPVEAR
Ga0307374_103484001	3300031670	Soil	MTRDSERVNMTLIALACAMLMLLPLVTTFNDLLTTWALGLGAN
Ga0307374_106168761	3300031670	Soil	VRTRDSERVNMTLIALACAMLMLLPLVTTFNDLLTTWALGLGAN
Ga0307469_108003161	3300031720	Hardwood Forest Soil	MRRQDRDALNMTLIATTCALLMLLPLVTTFDELLTSWALQLGANNPLQAI
Ga0307475_113438102	3300031754	Hardwood Forest Soil	VRTRERDLNLTLLAIACALLMLLPLVTTFDDLLTTWALQFGANNPLQ
Ga0307470_104660322	3300032174	Hardwood Forest Soil	VKTRERDLNLTLLALACALLMLLPLVTTFDDLLTTWALQLGANNPLQTIVPVEARMVVGLLGLA
Ga0307472_1026491111	3300032205	Hardwood Forest Soil	MNAPRRESVNLTVIAIACALLMVLPLVTTFDELLTAWAMRLGADNPLQAIVPAESRM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068057

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences