Metagenome / Metatranscriptome Family F068064

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068064
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	42 residues
Representative Sequence	VRKNYQRKVRKSNHKFEVVGGQELLVRVPLPMAEVWAEMQA
Number of Associated Samples	104
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.00 %
% of genes near scaffold ends (potentially truncated)	82.40 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.600 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.400 % of family members)
Environment Ontology (ENVO)	Unclassified (30.400 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.800 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.84% β-sheet: 0.00% Coil/Unstructured: 81.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF07676	PD40	3.20
PF13620	CarboxypepD_reg	2.40
PF00872	Transposase_mut	2.40
PF01695	IstB_IS21	2.40
PF00072	Response_reg	1.60
PF17131	LolA_like	1.60
PF13936	HTH_38	1.60
PF02927	CelD_N	0.80
PF01475	FUR	0.80
PF12680	SnoaL_2	0.80
PF05598	DUF772	0.80
PF13545	HTH_Crp_2	0.80
PF07992	Pyr_redox_2	0.80
PF01609	DDE_Tnp_1	0.80
PF08818	DUF1801	0.80
PF00665	rve	0.80
PF04191	PEMT	0.80
PF11154	DUF2934	0.80
PF14559	TPR_19	0.80
PF04972	BON	0.80
PF12146	Hydrolase_4	0.80
PF03992	ABM	0.80
PF00180	Iso_dh	0.80
PF01833	TIG	0.80
PF13560	HTH_31	0.80
PF00893	Multi_Drug_Res	0.80
PF14534	DUF4440	0.80
PF08592	Anthrone_oxy	0.80
PF05985	EutC	0.80
PF00691	OmpA	0.80
PF13649	Methyltransf_25	0.80
PF00069	Pkinase	0.80
PF12704	MacB_PCD	0.80
PF01699	Na_Ca_ex	0.80
PF12697	Abhydrolase_6	0.80
PF04366	Ysc84	0.80
PF00882	Zn_dep_PLPC	0.80
PF13378	MR_MLE_C	0.80
PF00326	Peptidase_S9	0.80
PF13365	Trypsin_2	0.80
PF13590	DUF4136	0.80
PF13506	Glyco_transf_21	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.20
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	2.40
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	2.40
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.80
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.80
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.80
COG2076	Multidrug transporter EmrE and related cation transporters	Defense mechanisms [V]	0.80
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.80
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.80
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.80
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.80
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.80
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.80
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.80
COG4302	Ethanolamine ammonia-lyase, small subunit	Amino acid transport and metabolism [E]	0.80
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.80
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.80
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.80
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.80
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.80
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.80
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.60 %
Unclassified	root	N/A	10.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.60 %
Unclassified	root	N/A	10.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.60 %
Unclassified	root	N/A	10.40 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	67.20 %
Unclassified	root	N/A	10.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	38.40 %
Unclassified	root	N/A	10.40 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.20 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.40 %
Unclassified	root	N/A	10.40 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.20 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.80 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.40 %
Unclassified	root	N/A	10.40 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.20 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.80 %
Thermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales	0.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.40 %
Unclassified	root	N/A	10.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.20 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.80 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.80 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.80 %
Thermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.40 %
Unclassified	root	N/A	10.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.20 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.80 %
Meiothermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus	0.80 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.80 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320005\|FACEOR_FY84VJD01B2H5L	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
2088090014\|GPIPI_17268428	All Organisms → cellular organisms → Bacteria → Acidobacteria	3798	Open in IMG/M
2170459024\|GZRSKLJ01CBN2H	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300001593\|JGI12635J15846_10359955	Not Available	889	Open in IMG/M
3300005367\|Ga0070667_100308997	All Organisms → cellular organisms → Bacteria → Acidobacteria	1425	Open in IMG/M
3300005445\|Ga0070708_100019392	All Organisms → cellular organisms → Bacteria → Proteobacteria	5714	Open in IMG/M
3300005445\|Ga0070708_100250851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1663	Open in IMG/M
3300005610\|Ga0070763_10035336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2309	Open in IMG/M
3300005764\|Ga0066903_101271422	Not Available	1372	Open in IMG/M
3300005841\|Ga0068863_101743336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300006052\|Ga0075029_100075334	All Organisms → cellular organisms → Bacteria → Acidobacteria	1991	Open in IMG/M
3300006173\|Ga0070716_100331242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1070	Open in IMG/M
3300006854\|Ga0075425_100182517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2410	Open in IMG/M
3300006854\|Ga0075425_100568583	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300006871\|Ga0075434_101681677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300006893\|Ga0073928_10094238	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M
3300006914\|Ga0075436_100868657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300009038\|Ga0099829_11249243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300009792\|Ga0126374_10254658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1148	Open in IMG/M
3300010046\|Ga0126384_12253728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300010048\|Ga0126373_10175116	All Organisms → cellular organisms → Bacteria	2060	Open in IMG/M
3300010048\|Ga0126373_10218599	Not Available	1857	Open in IMG/M
3300010048\|Ga0126373_10220017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1851	Open in IMG/M
3300010159\|Ga0099796_10402871	Not Available	600	Open in IMG/M
3300010339\|Ga0074046_10235207	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300010358\|Ga0126370_11526136	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300010360\|Ga0126372_12613070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300010376\|Ga0126381_101900996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300010376\|Ga0126381_102150678	All Organisms → cellular organisms → Bacteria → Acidobacteria	803	Open in IMG/M
3300010376\|Ga0126381_102847661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300010376\|Ga0126381_102966104	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300011120\|Ga0150983_10995189	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300011271\|Ga0137393_10289728	All Organisms → cellular organisms → Bacteria → Acidobacteria	1393	Open in IMG/M
3300012361\|Ga0137360_10734560	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300012363\|Ga0137390_10510642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1175	Open in IMG/M
3300012984\|Ga0164309_10305450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1149	Open in IMG/M
3300012984\|Ga0164309_11538727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300012987\|Ga0164307_10866422	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300014158\|Ga0181521_10372239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300014164\|Ga0181532_10005285	All Organisms → cellular organisms → Bacteria → Proteobacteria	11017	Open in IMG/M
3300015371\|Ga0132258_10694936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2560	Open in IMG/M
3300016319\|Ga0182033_10004522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus	7340	Open in IMG/M
3300016341\|Ga0182035_10308127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1301	Open in IMG/M
3300016371\|Ga0182034_11258028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300016371\|Ga0182034_11530201	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300016422\|Ga0182039_10026697	All Organisms → cellular organisms → Bacteria	3648	Open in IMG/M
3300016422\|Ga0182039_10090446	All Organisms → cellular organisms → Bacteria → Acidobacteria	2229	Open in IMG/M
3300017822\|Ga0187802_10218040	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300017822\|Ga0187802_10254044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300017929\|Ga0187849_1025058	All Organisms → cellular organisms → Bacteria	3222	Open in IMG/M
3300017931\|Ga0187877_1023882	All Organisms → cellular organisms → Bacteria	3216	Open in IMG/M
3300017933\|Ga0187801_10029540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1916	Open in IMG/M
3300017933\|Ga0187801_10171398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300017940\|Ga0187853_10025699	All Organisms → cellular organisms → Bacteria	3203	Open in IMG/M
3300017955\|Ga0187817_10593745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300017955\|Ga0187817_10899156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300018004\|Ga0187865_1319593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300018029\|Ga0187787_10449283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300019786\|Ga0182025_1328179	All Organisms → cellular organisms → Bacteria → Proteobacteria	2598	Open in IMG/M
3300019890\|Ga0193728_1115770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1221	Open in IMG/M
3300020004\|Ga0193755_1166544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300020582\|Ga0210395_11107762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300021168\|Ga0210406_10443178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
3300021170\|Ga0210400_11255616	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300021171\|Ga0210405_10029928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4366	Open in IMG/M
3300021180\|Ga0210396_10048441	All Organisms → cellular organisms → Bacteria	3897	Open in IMG/M
3300021181\|Ga0210388_10020660	All Organisms → cellular organisms → Bacteria	5328	Open in IMG/M
3300021401\|Ga0210393_10618501	Not Available	884	Open in IMG/M
3300021404\|Ga0210389_10096580	All Organisms → cellular organisms → Bacteria → Acidobacteria	2273	Open in IMG/M
3300021406\|Ga0210386_10154089	All Organisms → cellular organisms → Bacteria	1923	Open in IMG/M
3300021420\|Ga0210394_11469502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300021432\|Ga0210384_10012229	All Organisms → cellular organisms → Bacteria	8617	Open in IMG/M
3300021432\|Ga0210384_11905376	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300021479\|Ga0210410_10018024	All Organisms → cellular organisms → Bacteria	6099	Open in IMG/M
3300021559\|Ga0210409_10177392	All Organisms → cellular organisms → Bacteria → Proteobacteria	1946	Open in IMG/M
3300021560\|Ga0126371_10458065	All Organisms → cellular organisms → Bacteria → Acidobacteria	1422	Open in IMG/M
3300022529\|Ga0242668_1111198	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300022557\|Ga0212123_10091927	All Organisms → cellular organisms → Bacteria → Acidobacteria	2511	Open in IMG/M
3300024227\|Ga0228598_1114753	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300024245\|Ga0247677_1038390	Not Available	694	Open in IMG/M
3300025910\|Ga0207684_10169175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1884	Open in IMG/M
3300025933\|Ga0207706_10359838	All Organisms → cellular organisms → Bacteria → Acidobacteria	1264	Open in IMG/M
3300026310\|Ga0209239_1053720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1808	Open in IMG/M
3300026316\|Ga0209155_1200833	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300026557\|Ga0179587_10131829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1544	Open in IMG/M
3300027174\|Ga0207948_1007756	Not Available	1225	Open in IMG/M
3300027587\|Ga0209220_1178810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300027698\|Ga0209446_1100854	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300027853\|Ga0209274_10328470	Not Available	787	Open in IMG/M
3300027889\|Ga0209380_10088978	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1777	Open in IMG/M
3300027889\|Ga0209380_10302408	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300028047\|Ga0209526_10754019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300028906\|Ga0308309_11385711	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300030843\|Ga0075392_11184738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300031057\|Ga0170834_112089534	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300031128\|Ga0170823_14885218	Not Available	569	Open in IMG/M
3300031128\|Ga0170823_15782432	Not Available	530	Open in IMG/M
3300031231\|Ga0170824_127020710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300031446\|Ga0170820_14967580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300031573\|Ga0310915_10405271	All Organisms → cellular organisms → Bacteria → Acidobacteria	968	Open in IMG/M
3300031573\|Ga0310915_10606888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300031668\|Ga0318542_10442883	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300031708\|Ga0310686_108413421	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300031708\|Ga0310686_117538713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300031720\|Ga0307469_10649189	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300031720\|Ga0307469_10731792	Not Available	900	Open in IMG/M
3300031720\|Ga0307469_11327240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300031740\|Ga0307468_101058538	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300031753\|Ga0307477_10826581	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300031765\|Ga0318554_10490184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300031770\|Ga0318521_10376217	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300031771\|Ga0318546_10197214	All Organisms → cellular organisms → Bacteria → Acidobacteria	1374	Open in IMG/M
3300031782\|Ga0318552_10563150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300031796\|Ga0318576_10635426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300031823\|Ga0307478_11429021	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031833\|Ga0310917_10100625	Not Available	1860	Open in IMG/M
3300031962\|Ga0307479_10009352	All Organisms → cellular organisms → Bacteria → Acidobacteria	9086	Open in IMG/M
3300031962\|Ga0307479_10135801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2407	Open in IMG/M
3300032001\|Ga0306922_11893725	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300032090\|Ga0318518_10630893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300032174\|Ga0307470_10735536	Not Available	756	Open in IMG/M
3300032782\|Ga0335082_10416413	All Organisms → cellular organisms → Bacteria → Acidobacteria	1207	Open in IMG/M
3300033134\|Ga0335073_10541703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1317	Open in IMG/M
3300033290\|Ga0318519_10021022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2920	Open in IMG/M
3300033977\|Ga0314861_0177203	All Organisms → cellular organisms → Bacteria → Acidobacteria	1023	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.80%
Host-Associated	Host-Associated	7.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Aquatic	Environmental → Aquatic	12.80%
Plants	Host-Associated → Plants	7.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Freshwater	Environmental → Aquatic → Freshwater	10.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.60%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.60%
Sediment	Environmental → Aquatic → Sediment	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.40%
Loam	Environmental → Terrestrial → Soil → Loam	12.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.00%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.20%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.00%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.20%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.60%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.60%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.80%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.80%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030843	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_4467340	2032320005	Soil	VKHKYQRQERKSNHKFEVVRGQELLVRVPLPMAEVWAEIQAQVEQLTGKP
GPIPI_03181620	2088090014	Soil	VKKNYQRKERKSNHKFEVVRGQELLVRVPLPMAEVWAEMQ
FD1_08659240	2170459024	Grass Soil	VGNKYQRKERKSNHKFEVVGGQELMVRMPLPMAEVWAEMQAQVAELTGQAG
JGI12635J15846_103599552	3300001593	Forest Soil	VXKKYQRKQRKSNRKFEIVRGQELMVQVPLPIAEVWSELQTQVEEL
Ga0070667_1003089971	3300005367	Switchgrass Rhizosphere	VRNKYQRKEHKSNHKFEVVGGQELLVRVPLPMAEVWRRCKRR*
Ga0070708_1000193926	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VKRNYRRKAHKSNHKFEAVGEQELLVRVPLPMAEVRAVN*
Ga0070708_1002508512	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VKRNYQRKAHKSNHKFEAVGEQELLVRVPLPMAEVRAAN*
Ga0070763_100353361	3300005610	Soil	VRNKYQSKDHKSNPKFEVVRGQELLVQVPLPIAEVWSELQAQV
Ga0066903_1012714223	3300005764	Tropical Forest Soil	VKKNYQRKDRKSNHKFEIVGGQELLVRVPLPMAEVW
Ga0068863_1017433361	3300005841	Switchgrass Rhizosphere	VRHKYQRQERKSNHKLEIVRGQELLVRVPLPMAEVW
Ga0075029_1000753342	3300006052	Watersheds	VRGNYQKKDRKSNHNFEVVRGQKLMVRLLLPMVEVWPRRKRR*
Ga0070716_1003312422	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	FLKERAAVKKNYQRKERKSNHKFEIVRGQELLMRVPLPMAEVWA*
Ga0075425_1001825171	3300006854	Populus Rhizosphere	VRQKYQRQERKSNHKLEMVRGQELLVRVPLPMAELWVEMQAQVEQLTGQAGL
Ga0075425_1005685831	3300006854	Populus Rhizosphere	VRKKYQSKERKSNHKFEVVRGQELMVRVPLPMAEV*
Ga0075434_1016816771	3300006871	Populus Rhizosphere	VKKNYQRKERKSNHKLEIVRGQELLVRVPLPMAEVW
Ga0073928_100942381	3300006893	Iron-Sulfur Acid Spring	VRKERKSNHKFEVVGGQELMVRVPLPLAEVWAEMQAQVEEL
Ga0075436_1008686572	3300006914	Populus Rhizosphere	VKKKYQSREHKSNPKFEIVRGQKLLVQVPLPMAEVWAEMQARVEELTGQA
Ga0099829_112492432	3300009038	Vadose Zone Soil	VRNNYQTKDRKSNHKFEVVRGQELLVRVPLPMAEVWAEMQAQVEELTG
Ga0126374_102546582	3300009792	Tropical Forest Soil	VKKNYQRKGRKSNHKFEVVRGQELLVQVPLPMAEMWAEM
Ga0126384_122537282	3300010046	Tropical Forest Soil	VKNKYQRKERKSNHKFEVVGEQELLVRVPLPMAEVWAEMQAQV
Ga0126373_101751164	3300010048	Tropical Forest Soil	VRKNYQRKARKSNHKFEVVGGQELLVRVPLPMAEVWA
Ga0126373_102185993	3300010048	Tropical Forest Soil	VRQKYQREVRKSNHKFEIVRGQELLVRVPLPMAEVWA
Ga0126373_102200172	3300010048	Tropical Forest Soil	VRKKYQRQVRKSNHKFEVVRGQELMVRVPLPLAEVWAEMQTQLG*
Ga0099796_104028711	3300010159	Vadose Zone Soil	VKRNYQRKERKSNHKFEVVRGQELLVRVPLPMAEV
Ga0074046_102352073	3300010339	Bog Forest Soil	VRNNYQRKERKSNHKFEVVQGQELMVRVPLPMAEVWAEMQAQVEELT
Ga0126370_115261363	3300010358	Tropical Forest Soil	VRKNYQRKARKSNHKFEVVGEQELLVPLPMAEVWAEMQAQVE*
Ga0126372_126130701	3300010360	Tropical Forest Soil	VRKNYQRQTRKSNHKFEVVGGQELLVRVPLPMAEVWAEMQA
Ga0126381_1019009961	3300010376	Tropical Forest Soil	VRNKYQRQDRKSNHKFEVVRGQVLSVRVPLPMAEVWAEMQAQVEQL
Ga0126381_1021506782	3300010376	Tropical Forest Soil	VRKKYQRQVRKSNHKFEIVQGQDLLVRVPLPMAEVWAEMQARVEE
Ga0126381_1028476611	3300010376	Tropical Forest Soil	VKKKYQRKVCKSNHKFEIVQGRELLVRVPLPMAEVWAEMQARVEE
Ga0126381_1029661041	3300010376	Tropical Forest Soil	VRKNYQRKARKSNHKFEVVGGQELLVRVPLPMAEVWAEMQAH
Ga0150983_109951892	3300011120	Forest Soil	VRNNYQREVRKSNHKLEVVRGQELLVRVPLPMAEVWAEMQAQVEALAG*
Ga0137393_102897282	3300011271	Vadose Zone Soil	VRNKYQTKDRKSNHKFEVVRGQELLVRVPLPMAEVWAEMQAQV
Ga0137360_107345601	3300012361	Vadose Zone Soil	VRNKYQRKDRKSNHKFEIVGGQELLVRVPLPIAEVWAEMQAQVEELTG
Ga0137390_105106422	3300012363	Vadose Zone Soil	VRKNYQTKDRKSNHKFEVVRGKELLVRVPLPIAEVWAEMQAQVEELTGQAGL
Ga0164309_103054501	3300012984	Soil	VRNKYQRKERKSNPKLEVVGGQELLVRVPLPIAEVWAEMQA
Ga0164309_115387272	3300012984	Soil	VEKNYQRKEHKSNHKFEVAREQELMVRVPLPMAEVWAEMQTQV
Ga0164307_108664222	3300012987	Soil	VRNNYQREVRKSNHKLEVVRGQELLVRVPLPMAEVWAEMQAQVE
Ga0181521_103722392	3300014158	Bog	VRNKYQRKDRKSNHKFEIVQGQEMMVQVPLPMAEVGRDA
Ga0181532_100052851	3300014164	Bog	VRNKYQRKERKSNHKFEVVGEQELLVRVPLPIAEVWAEM
Ga0132258_106949363	3300015371	Arabidopsis Rhizosphere	VRKKYQRQEHKSNHKFEVLRGQGLLVGVPLPMAEVWAEMQAQVEELTARAFISY*
Ga0182033_100045221	3300016319	Soil	VKKNYQSKAHKSNHKFEVVGGQELLVRLPLPMAEVWA
Ga0182035_103081272	3300016341	Soil	VRKKYQSRKHKSNHKFEIVRGQELLVRVPLPMAEVWAEMQA
Ga0182034_112580281	3300016371	Soil	VRKNYQRKARKSNHKFEVVGGQELLVRVSLPMAEV
Ga0182034_115302011	3300016371	Soil	VRKNYQRKARKSNHKFEVVGEQELLVRVSLPMAEVW
Ga0182039_100266971	3300016422	Soil	KKNYQSKAHKSNHKFEVVGGQELLVRLPLPMAEVWAEMQA
Ga0182039_100904464	3300016422	Soil	VRKNYQRKDRKSNHKFEMVGRQELLVRVPLPMAEVWAEM
Ga0187802_102180402	3300017822	Freshwater Sediment	VRKNYQRKERKSNYKFEVVGGQELLVQVPLPMAEVWAEMQAKVEELADYQAFVNERSSH
Ga0187802_102540441	3300017822	Freshwater Sediment	VRNKYQRKDRKSNHKFEVVGGQELLVRVPLPIAEVWAEMQ
Ga0187849_10250581	3300017929	Peatland	VRNNYQRKERKFNHKFEVVGGQELLVQVPLPMAEVWAEMQAKVEELAGQAGL
Ga0187877_10238825	3300017931	Peatland	VRNNYQRKERKFNHKFEVVGGQELLVQVPLPMAEVWAEMQAKVEELAGQ
Ga0187801_100295403	3300017933	Freshwater Sediment	VRKNYQRKERKSNHKFEVIGGQELLVQVPLPCDAEIMK
Ga0187801_101713981	3300017933	Freshwater Sediment	VGKKYQSKERKSIHKFEIVRGQELLVQVPLPMAEVWAEMQA
Ga0187853_100256991	3300017940	Peatland	VRNNYQRKERKFNHKFEVVGGQELLVQVPLPMAEVWAEMQAKVEEL
Ga0187817_105937451	3300017955	Freshwater Sediment	VRNKYQRKERKSNRKFEVVGGQELLVRVPLPIAEVWAEMQAQVEE
Ga0187817_108991562	3300017955	Freshwater Sediment	VRKNYQRKERKSNYKFEVVGGQELLVQVPLPMAEVWAEMQAKVEELADYQAL
Ga0187865_13195931	3300018004	Peatland	VRNNYQRKERKSNHKFEVVGGQELLVQVPLPMAEVWAEMQAKVE
Ga0187787_104492831	3300018029	Tropical Peatland	VRKNYQRKAHKSNHKFEVVGGRELMVRVPLPMAEVWAEMQAKVEELAGRAGLQ
Ga0182025_13281796	3300019786	Permafrost	VRKKYQRKERKSNHKFEVVGGQELLVRVPLPLAQVWAEMQAQVEELTGMTDCRS
Ga0193728_11157702	3300019890	Soil	VKKNYQRKERKSNHKFEVVQGQELLVRVPLPMAEVW
Ga0193755_11665441	3300020004	Soil	VRNKYQRKDRKSNHKFEVVGGQELLVRVPLPIAEVWAE
Ga0210395_111077621	3300020582	Soil	VRNKYQRKERKSNPKLEVVGGQELLVRVPLPIVEVWAEM
Ga0210406_104431783	3300021168	Soil	VRNKYQRKERKSNPKLEVVGGQELLVRVPLPIAEVWAEMQAQ
Ga0210400_112556162	3300021170	Soil	VKKNYQRKERKSNHKFEARRALESLVRVPLPMAAVWVEMQAQKN
Ga0210405_100299284	3300021171	Soil	VRNKYQRKERKSNDKFEVVGGPELMVRVPLPMAEVWAEMQAQVEELTGHAG
Ga0210396_100484411	3300021180	Soil	VRKNYERKERKSNHTFEVVRGQELLVRVPLPMAEVWAEMQAKVEELT
Ga0210388_100206607	3300021181	Soil	VRNKYQRKQRKSNQKFEIVRGQELMVQVPLPIAEV
Ga0210393_106185012	3300021401	Soil	VRKKYQRKERKSNHKFEVVGGRELLVRVPLPLAEVWA
Ga0210389_100965801	3300021404	Soil	VRKNYQRKERKSNHKFEVVGGQELMVRVPLPIAEVW
Ga0210386_101540893	3300021406	Soil	VRKKYQRKERKSNHKFEVVGGRELLVRVPLPLAEVWAEM
Ga0210394_114695022	3300021420	Soil	VRKNYQRKERKSNRKFEVVRGQELLVRVPLPMAEVWAEMQAQVEE
Ga0210384_100122299	3300021432	Soil	VRKKYQRKDRKSNHEFEVVGGQELMVRVPLPIAEV
Ga0210384_119053761	3300021432	Soil	VKKNYQRKERKSNHKFEVRRALESRVRVPLPMAAVWVEMQAQKN
Ga0210410_100180247	3300021479	Soil	VRKNYQRKERKSNRKFEVVRGQELLVRVPLPMAEVWAEMQAQVVIDVEGNCNC
Ga0210409_101773921	3300021559	Soil	VRKNYQRKERKSNHKFEVVGGEELMVRVPLPMAEVWAEMQAQVEELTE
Ga0126371_104580653	3300021560	Tropical Forest Soil	VRKNYQRKARKSNHKFEVVGGQELLVRVPLPMAEVWAEMQAHVEELAGQAGL
Ga0242668_11111981	3300022529	Soil	VRNKYQRKQRKSNPKFQIVCGQELMVQVPLPIAEVWSELQA
Ga0212123_100919271	3300022557	Iron-Sulfur Acid Spring	VRKERKSNHKFEVVGGQELMVRVPLPLAEVWAEMQAQ
Ga0228598_11147532	3300024227	Rhizosphere	CESLLKERAAVRNKYQRKQRKSNHKFEIVRGQELLVRVPLPIAEVWAEMQTQVEELTG
Ga0247677_10383902	3300024245	Soil	VRKKYQRQVRKSNHKLEIVRGQELLVRVPLPMAEV
Ga0207684_101691752	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VKRNYWRKAHKSNHKFEAVGEQELLVRVPLPMAEVRAVN
Ga0207706_103598382	3300025933	Corn Rhizosphere	VRNKYQRKEHKSNHKFEVVGGQELLVRVPLPMAEVWRRCKRR
Ga0209239_10537203	3300026310	Grasslands Soil	VRNKYQRKDRKSNHKFEIVRGQELLVPLPMAEVWAEMQAQVEEL
Ga0209155_12008332	3300026316	Soil	VKKNYQRKERKSNHKFEVVRGQELLVRVPLPMAEV
Ga0179587_101318293	3300026557	Vadose Zone Soil	VRNKYQRKDRKSNHKFEVVGGPELLVRVPLPIAEVWAEMQAQ
Ga0207948_10077562	3300027174	Forest Soil	VRNKYQRKERKSNHKFEVVGGQELLVRVPLPIAEVWAEMQAQVEQLTGQ
Ga0209220_11788101	3300027587	Forest Soil	VRKKYQRKERKSNRKFEVVGGQELLVRVPLPIAEVWAEM
Ga0209446_11008541	3300027698	Bog Forest Soil	VRNNYQTKEQKSNHKFDVLGGQELMVQVPLPIAEVWAEMQ
Ga0209274_103284701	3300027853	Soil	VRKKYQRKDRKSNHKFEVVGGQELLVRVPLPIAEVW
Ga0209380_100889781	3300027889	Soil	VRNKYQRKERKSNHKFEVVGGPELMVRVPLPLAEVWAEMQAQVEELTGHAGL
Ga0209380_103024082	3300027889	Soil	VRNNYQRKEQKSNHKFDVLGGQELMVRVPLPIAEVWAEMQ
Ga0209526_107540191	3300028047	Forest Soil	VRNKYQTKDRKSNHKFEVVGGQELMVRVPLPLAEVWAEMQAQVEEL
Ga0308309_113857111	3300028906	Soil	VRNKYQRKEHKSNHKFEVVGGQELLVRVPLPLAEVWAEMQAQVEELTGHA
Ga0075392_111847382	3300030843	Soil	VKKNYQRKERKSNHKFEVVGGQELLVRVPLPIAEVWAEMQAQVEELT
Ga0170834_1120895341	3300031057	Forest Soil	VRNKYQRKERKSNHKFEVVRGQELLVRVPLPMAEVWAEMQAQVEELT
Ga0170823_148852181	3300031128	Forest Soil	VRKKYQRKERKSNDKFEVVGGRELLVRVPLPLAEVWAEMQAQ
Ga0170823_157824321	3300031128	Forest Soil	VSKKYQRKERKSNDKFEVVGGRELLVRVPLPLAEVWAEMQAQ
Ga0170824_1270207102	3300031231	Forest Soil	VRNKYQRKQRKSNQKFQIVRGQELMVQVPLPIAEVWRELQAQVEEL
Ga0170820_149675802	3300031446	Forest Soil	VRHKYQRQERKSNHKLEIVRGQELLVRVPLPMAEVWAEMQ
Ga0310915_104052712	3300031573	Soil	VKKNYQSKAHKSNHKFEVVGGQELLVRLPLPMAEVWAEMQA
Ga0310915_106068881	3300031573	Soil	VRKNYQRKARKSNHKFEVVGGQELLVRVPLPMAEV
Ga0318542_104428832	3300031668	Soil	VRKNYQRKERKSNHKFEVVRGQELLVRVPLPMAEVW
Ga0310686_1084134212	3300031708	Soil	VRNKYQRKQRKSNHKFEIVRGQELLVRVPLPIAEVWAEMQTQVEELTG
Ga0310686_1175387131	3300031708	Soil	VRKKYQRKERKSNWKFEIVRGQELMVQVPLPIAEVWSELQTQVEELT
Ga0307469_106491892	3300031720	Hardwood Forest Soil	VRNKYQRQERKSNHKFEIVRGQEMLVRVPLPIAEVWAEMQ
Ga0307469_107317921	3300031720	Hardwood Forest Soil	VEKNYQRKEHKSNHKFEVAREQELMVRVPLPMAEVWAE
Ga0307469_113272401	3300031720	Hardwood Forest Soil	VRKNYQRKERKSNHKFEVVRGQGLLVRVPLPMAEVWAESGY
Ga0307468_1010585382	3300031740	Hardwood Forest Soil	RNNYQREVRKSNHKLEVVRGQELLVRVPLPMAEVWAEMQAQVEALAG
Ga0307477_108265811	3300031753	Hardwood Forest Soil	VRNKYQRKERKSIHKLEEVQGQQLLVRVPLPMAEV
Ga0318554_104901841	3300031765	Soil	VRKNYQRKDRKSNHKLEMVGRQELLVRVPLPMAEVWAEMQARVEEL
Ga0318521_103762171	3300031770	Soil	VRKNYQRKVRKSNHKFEVVGGQELLVRVPLPMAEVWAEMQA
Ga0318546_101972142	3300031771	Soil	VRKNYQRKDRKSTHKFEMVGRQELLVRVPLPMAEVW
Ga0318552_105631501	3300031782	Soil	VRKNYQTIDRKSNHKFDIVGGQELPMRVPLPMAEVCAEMHARVE
Ga0318576_106354262	3300031796	Soil	VRKNYQRKARKSNHKFEVVGGQELLVRVPLPMAEVWAEMQ
Ga0307478_114290212	3300031823	Hardwood Forest Soil	VRKKYQRKDRKSNHKFEVVGGQELMVQVPLPIAEVWAEMQAQVEKLT
Ga0310917_101006254	3300031833	Soil	VRKNYQRKDRKSNHKFEVVGEQELLVRVPLPIAEVWAEMQAQVQELT
Ga0307479_100093521	3300031962	Hardwood Forest Soil	VRNKYQRKERKSNHKFEVVEGQELLVQVPLPMAEVWAEMQ
Ga0307479_101358013	3300031962	Hardwood Forest Soil	VRKKYQRKERKSNHKFEVVGGQELMMRIPLPLAEVWAEMQG
Ga0306922_118937252	3300032001	Soil	VRKNYQSKKHKSNHKFEVVGGQELQVRVPLPMAEVWAEMQAK
Ga0318518_106308931	3300032090	Soil	VRKNYQTIDRKSNHKFDIVGGQELPMRVPLPMAEVCAEMHARV
Ga0307470_107355362	3300032174	Hardwood Forest Soil	VRNKYQRKDRKSNHKFEVVGGQELLVRVPLPMAEVWAEM
Ga0335082_104164131	3300032782	Soil	VRKNYQKKERKSNHKFEVVGGQELLVRVPLPIAEVWAEMQAQ
Ga0335073_105417031	3300033134	Soil	VRKNYQRKARKSNRKFEVVGGQELQLRVPLPMAEVWAEMQTKVEELAG
Ga0318519_100210221	3300033290	Soil	VRKNYQRRDRKSNHKFEMVGRQELLVRVPLPMAEVWAERCKLGSR
Ga0314861_0177203_918_1022	3300033977	Peatland	MRSRYQKKDRKSNHEFEVVGGQELFVRVPLPMAEV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068064

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences