Metagenome Family F068082

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068082
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	46 residues
Representative Sequence	MSDKFESLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDE
Number of Associated Samples	90
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.00 %
% of genes near scaffold ends (potentially truncated)	99.20 %
% of genes from short scaffolds (< 2000 bps)	95.20 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.600 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.200 % of family members)
Environment Ontology (ENVO)	Unclassified (42.400 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.600 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.11% β-sheet: 0.00% Coil/Unstructured: 28.89%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF01844	HNH	1.60
PF13545	HTH_Crp_2	0.80
PF00805	Pentapeptide	0.80
PF07452	CHRD	0.80
PF08734	GYD	0.80
PF00196	GerE	0.80
PF00884	Sulfatase	0.80
PF01068	DNA_ligase_A_M	0.80
PF04055	Radical_SAM	0.80
PF01527	HTH_Tnp_1	0.80
PF00872	Transposase_mut	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.80
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.80
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.80
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.80
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.60 %
Unclassified	root	N/A	2.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.60 %
Unclassified	root	N/A	2.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.60 %
Unclassified	root	N/A	2.40 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	80.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.80 %
Unclassified	root	N/A	2.40 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	80.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.20 %
Unclassified	root	N/A	2.40 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	80.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.20 %
Unclassified	root	N/A	2.40 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.80 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	80.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.40 %
Unclassified	root	N/A	2.40 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.60 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.80 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	80.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Unclassified	root	N/A	2.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.60 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.60 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.80 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	80.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Unclassified	root	N/A	2.40 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.60 %
Bradyrhizobium paxllaeri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium paxllaeri	0.80 %
Acidiphilium angustum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium angustum	0.80 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004268\|Ga0066398_10163274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300005148\|Ga0066819_1003144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300005179\|Ga0066684_10791081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300005332\|Ga0066388_100529094	All Organisms → cellular organisms → Bacteria → Proteobacteria	1811	Open in IMG/M
3300005332\|Ga0066388_103613689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300005347\|Ga0070668_102202725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300005435\|Ga0070714_101057280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300005436\|Ga0070713_101348229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300005445\|Ga0070708_100255922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1645	Open in IMG/M
3300005445\|Ga0070708_100693593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300005467\|Ga0070706_100309525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1473	Open in IMG/M
3300005467\|Ga0070706_102030457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300005468\|Ga0070707_102219027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300005518\|Ga0070699_101567997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300005536\|Ga0070697_102101299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300005555\|Ga0066692_10292090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300005557\|Ga0066704_10243856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1220	Open in IMG/M
3300005713\|Ga0066905_100798740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300005713\|Ga0066905_100870068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300005764\|Ga0066903_103765138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300005764\|Ga0066903_105707008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300005764\|Ga0066903_108102889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300006028\|Ga0070717_11035538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300006172\|Ga0075018_10673914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300006796\|Ga0066665_11096713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300006904\|Ga0075424_102554069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300007076\|Ga0075435_101297706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300009137\|Ga0066709_101306482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300009792\|Ga0126374_11344405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300010043\|Ga0126380_10103998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1712	Open in IMG/M
3300010043\|Ga0126380_11544604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300010046\|Ga0126384_11239649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300010046\|Ga0126384_11275773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300010046\|Ga0126384_11471357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300010048\|Ga0126373_10263929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1701	Open in IMG/M
3300010048\|Ga0126373_10635668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1122	Open in IMG/M
3300010358\|Ga0126370_10609753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300010358\|Ga0126370_11494811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300010358\|Ga0126370_12457177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300010359\|Ga0126376_10891045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300010360\|Ga0126372_12146685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300010361\|Ga0126378_11239973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300010366\|Ga0126379_10261995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1710	Open in IMG/M
3300010366\|Ga0126379_11911805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300010366\|Ga0126379_13110972	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300010376\|Ga0126381_100882491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1287	Open in IMG/M
3300010376\|Ga0126381_102531077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300010376\|Ga0126381_104259607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300010376\|Ga0126381_104526027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300010398\|Ga0126383_10660223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1122	Open in IMG/M
3300010398\|Ga0126383_11641876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300010398\|Ga0126383_13034256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300012200\|Ga0137382_10914312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300012200\|Ga0137382_11080731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300012209\|Ga0137379_10930354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300012209\|Ga0137379_11305259	Not Available	631	Open in IMG/M
3300012211\|Ga0137377_11675395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300012211\|Ga0137377_11712824	Not Available	550	Open in IMG/M
3300012361\|Ga0137360_10451650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium paxllaeri	1089	Open in IMG/M
3300012923\|Ga0137359_11143370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300012971\|Ga0126369_11490084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300012971\|Ga0126369_12458155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300013297\|Ga0157378_10888112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	921	Open in IMG/M
3300016294\|Ga0182041_10173717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1689	Open in IMG/M
3300016294\|Ga0182041_10697169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	900	Open in IMG/M
3300016341\|Ga0182035_10535917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1004	Open in IMG/M
3300016371\|Ga0182034_10312207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1264	Open in IMG/M
3300016371\|Ga0182034_10463373	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1051	Open in IMG/M
3300016404\|Ga0182037_10112010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1987	Open in IMG/M
3300016404\|Ga0182037_11615692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300016404\|Ga0182037_12016155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300016422\|Ga0182039_10702010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300016445\|Ga0182038_12088447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300018468\|Ga0066662_11972590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300020581\|Ga0210399_10629520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300020581\|Ga0210399_10786391	Not Available	778	Open in IMG/M
3300021560\|Ga0126371_10786166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1098	Open in IMG/M
3300025922\|Ga0207646_10590174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	998	Open in IMG/M
3300025939\|Ga0207665_10005611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8363	Open in IMG/M
3300026343\|Ga0209159_1280236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300028784\|Ga0307282_10671484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300031545\|Ga0318541_10200050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M
3300031545\|Ga0318541_10347763	All Organisms → cellular organisms → Bacteria → Proteobacteria	828	Open in IMG/M
3300031572\|Ga0318515_10252895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300031573\|Ga0310915_11029494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300031668\|Ga0318542_10773756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300031719\|Ga0306917_10388625	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300031724\|Ga0318500_10308818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300031744\|Ga0306918_11187135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300031770\|Ga0318521_10376118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300031770\|Ga0318521_10748104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300031771\|Ga0318546_10298107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1115	Open in IMG/M
3300031777\|Ga0318543_10232815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300031778\|Ga0318498_10344639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300031781\|Ga0318547_10560546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300031782\|Ga0318552_10477437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300031796\|Ga0318576_10153398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300031798\|Ga0318523_10405639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300031821\|Ga0318567_10698116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300031833\|Ga0310917_10415045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	915	Open in IMG/M
3300031879\|Ga0306919_10049781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium angustum	2766	Open in IMG/M
3300031879\|Ga0306919_10173758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1587	Open in IMG/M
3300031890\|Ga0306925_11615827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300031910\|Ga0306923_11441050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300031912\|Ga0306921_10137263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2856	Open in IMG/M
3300031912\|Ga0306921_12468302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300031942\|Ga0310916_10172950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1795	Open in IMG/M
3300031945\|Ga0310913_10089588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2065	Open in IMG/M
3300031945\|Ga0310913_10576819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300031946\|Ga0310910_10549674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300031947\|Ga0310909_11572961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300031954\|Ga0306926_10142605	All Organisms → cellular organisms → Bacteria	2965	Open in IMG/M
3300032001\|Ga0306922_10562441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1211	Open in IMG/M
3300032010\|Ga0318569_10585454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300032035\|Ga0310911_10199335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300032051\|Ga0318532_10120030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	931	Open in IMG/M
3300032059\|Ga0318533_10636745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300032059\|Ga0318533_10723490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300032059\|Ga0318533_10797721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300032064\|Ga0318510_10375244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300032066\|Ga0318514_10304959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300032091\|Ga0318577_10044818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1965	Open in IMG/M
3300032180\|Ga0307471_101627349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300032261\|Ga0306920_100393987	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300033289\|Ga0310914_11818687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.80%
Host-Associated	Host-Associated	3.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.00%
Plants	Host-Associated → Plants	3.20%
Aquatic	Environmental → Aquatic	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.20%
Sediment	Environmental → Aquatic → Sediment	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.00%
Loam	Environmental → Terrestrial → Soil → Loam	16.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.60%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066398_101632742	3300004268	Tropical Forest Soil	MSDKFESLDANEKAALESTLYRCRALAGRIGEELRKKKPEHFVDER
Ga0066819_10031442	3300005148	Soil	MSDKFESLDANKKAALESTLYRCRALVGRIAEELRKKKPEHFVDE
Ga0066684_107910812	3300005179	Soil	MSDKFESLDANEKAALESTLYRCRALVGRIGEELRKKKPE
Ga0066388_1005290941	3300005332	Tropical Forest Soil	MSDKFESLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDE
Ga0066388_1036136891	3300005332	Tropical Forest Soil	MSDKFKSLDANEKAALSTLYRCRALVGRIGEELRKKKLEHFVD
Ga0070668_1022027251	3300005347	Switchgrass Rhizosphere	MSDKFESLNANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSLADL
Ga0070714_1010572802	3300005435	Agricultural Soil	MSDEFDNRDANEKVALESTLYRCRALVGRIGEELRKKKPEH
Ga0070713_1013482291	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSDKFESLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDERS
Ga0070708_1002559226	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSDKFESLGANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDER
Ga0070708_1006935931	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSDKFESLDANEKAALESTLYRCRALVGRIGEELRKKKPEH
Ga0070706_1003095254	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSDKFESLGATEKAALESTLYRCRALVGRIGEELRKKKPEHFVDEKSL
Ga0070706_1020304571	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSDEFDNLDANEKAALESMLYRCRALVGRIGEELRKKKPEH
Ga0070707_1022190271	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSDKFESLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSLA
Ga0070699_1015679971	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSDKFESLGATEKAALESTLYRCRALVGRIGEELRKKKPEHFVDEK
Ga0070697_1021012993	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSDESLDANEKAALLYRCRALVGLIGEELRKKKPEHFVDERSLADLHA
Ga0066692_102920901	3300005555	Soil	MSDKFENLDANEKAALESTLYRCRALVGRIGEELRKKKPE
Ga0066704_102438561	3300005557	Soil	MSDKFESLGATEKAALESTLYRCRALVGRIGEELRKKKPEHFVD
Ga0066905_1007987403	3300005713	Tropical Forest Soil	MPNKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEH
Ga0066905_1008700682	3300005713	Tropical Forest Soil	MSDKFESLGANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDESSLA
Ga0066903_1037651381	3300005764	Tropical Forest Soil	MSDKFESLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDESSLADL
Ga0066903_1057070082	3300005764	Tropical Forest Soil	MSDKFESLGANEKAALESTLYRCRALVGRIGEELRK
Ga0066903_1081028892	3300005764	Tropical Forest Soil	MSDKFENLDANKKAALESTLYRCRALVGRIAEELRKKKPEHFVDEGS
Ga0070717_110355383	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSDKFKSLDANERAALESTLYRCRALVGRIGEELRK
Ga0075018_106739142	3300006172	Watersheds	MSDKFESLDENEKAALESMLYRCRALVGWIGEELRKKKPEHFVDERSLAD
Ga0066665_110967132	3300006796	Soil	MSDKFESLDATKKAALESMLYRCRALVGRIGEELRKKKP
Ga0075424_1025540691	3300006904	Populus Rhizosphere	MSDKFESLGANEKAALESTLYRCRALVGRIGEELRKKKP
Ga0075435_1012977062	3300007076	Populus Rhizosphere	MSDKFEDLDANEKAAFESMLYRCRALVGRIGEELRKKKPEHFVDERSLADLHA
Ga0066709_1013064824	3300009137	Grasslands Soil	MSDKFKSLDANEKAALQSTLYRCRALVGRIGEELRKKTPEHFVDERSLADFHA
Ga0126374_113444052	3300009792	Tropical Forest Soil	MSDKFESLGANEKAALESTLYRCRALVGRIGEELRKK
Ga0126380_101039984	3300010043	Tropical Forest Soil	MSDKFESLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDETALA
Ga0126380_115446042	3300010043	Tropical Forest Soil	MSDKFESLDANEKAALESTLYRCRALAGRIGEELRKK
Ga0126384_112396491	3300010046	Tropical Forest Soil	MPYKFKSLDANEKAALESTLYRCRALVGRIGEELRKKK
Ga0126384_112757731	3300010046	Tropical Forest Soil	MSNKFESLDANEKAALEFTLYRCRALVGRIGEELRKKKPEHFVDKL
Ga0126384_114713571	3300010046	Tropical Forest Soil	MPDEFDNLDANEKAALESTLYRCRALAGRIGEELRKKKPEHFVDERSLADFHSS
Ga0126373_102639296	3300010048	Tropical Forest Soil	MSDKFESLDANKKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSLAD
Ga0126373_106356681	3300010048	Tropical Forest Soil	MSYKFKSLDANQKAALESTLYRCRALVGRIGEELRKKKPEHF
Ga0126370_106097531	3300010358	Tropical Forest Soil	MPYKFKSLDANQKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSLADFH
Ga0126370_114948111	3300010358	Tropical Forest Soil	MPYKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSLADFH
Ga0126370_124571771	3300010358	Tropical Forest Soil	MSDKFGSLDANEKAAVESTLYRCRALVGRIGEELRKKKPEHFVDERSLAGFHAS
Ga0126376_108910453	3300010359	Tropical Forest Soil	MPDKFKSLDANEKAALESTLYRCRALVGRIGEELRK
Ga0126372_121466852	3300010360	Tropical Forest Soil	MSDESLDANEKAALLYRCRALVGLIGEELRKKKPEHFVDERSLADLHASLE
Ga0126378_112399732	3300010361	Tropical Forest Soil	MSDKFESLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDETA
Ga0126379_102619954	3300010366	Tropical Forest Soil	MSDEFDNLDENEKAALESTLYRCRALAGRIGEELRKKKPEHFVDERSLA
Ga0126379_119118053	3300010366	Tropical Forest Soil	MSDKFESLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDEK
Ga0126379_131109722	3300010366	Tropical Forest Soil	MSDKFGSLDANEKAAVESTLYRCRALVGRIGEELRKKKPEHFVDERSLAD
Ga0126381_1008824911	3300010376	Tropical Forest Soil	MSDRFESLDANERAAVESTLYRCRALVGRIGEELRKKKPEHFVDERSLLADLHASL
Ga0126381_1025310772	3300010376	Tropical Forest Soil	MPNKFKSLDANEKAALESTLYRCRALVGRIGEELRK
Ga0126381_1042596071	3300010376	Tropical Forest Soil	MSDEFDNLDENEKAALESTLYRCRALAGRIGEELRKKKPEHFVDER
Ga0126381_1045260271	3300010376	Tropical Forest Soil	MSDKFKSLDANEKAAVESTLYRCRALVGRIGEELRKKKPEHFVDERSLAD
Ga0126383_106602234	3300010398	Tropical Forest Soil	MSDRFESLDANERAAVESTLYRCRALVGRIGEELRK
Ga0126383_116418761	3300010398	Tropical Forest Soil	MSDKFESLDANKKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSLAD*
Ga0126383_130342561	3300010398	Tropical Forest Soil	MSDKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFV
Ga0137382_109143121	3300012200	Vadose Zone Soil	MSDKFESLGANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDE
Ga0137382_110807311	3300012200	Vadose Zone Soil	MSDKFESLDANEKAALESTLYRCRALVGRIGEELRKKKPDHFVD
Ga0137379_109303542	3300012209	Vadose Zone Soil	MSDKSENLDANEKAALESMLYRCRALVGRIGEELRKKKPE
Ga0137379_113052591	3300012209	Vadose Zone Soil	MSDKFESLDANEKAALLYRCRALVGRIGEELRKKKPEHFVDE
Ga0137377_116753952	3300012211	Vadose Zone Soil	MSDKFKSLDAKEKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSLAD
Ga0137377_117128241	3300012211	Vadose Zone Soil	MSDKFESLDANEKAALLYRCRALVGRIGEELRKKKPEHF
Ga0137360_104516504	3300012361	Vadose Zone Soil	MSDKFKSLDANERAALESTLYRCRALVGRIGEELRKKKPEHFVDE
Ga0137359_111433702	3300012923	Vadose Zone Soil	MSDKFKSLDANEKAALQSTLYRCRALVGRIGEELRKK
Ga0126369_114900842	3300012971	Tropical Forest Soil	MSNKFESLDANEKAALESTLYRCRALVGRIGEKLRKKKPEHFVDERSLADLHASLE
Ga0126369_124581551	3300012971	Tropical Forest Soil	MLDKFESLDANEKAALESTLYRCRALVGRIGEELRKKKPGHFVDEKSLEDF
Ga0157378_108881122	3300013297	Miscanthus Rhizosphere	MSDKCESLNANEKAALESTLYRCRALVGRIGEELRK
Ga0182041_101737174	3300016294	Soil	MSDKFENLDANEKAALESMLYRCRALVGRIGEELRKKKPEHFVDERSLADLHAS
Ga0182041_106971693	3300016294	Soil	MSDKFGSLDANEKAALESTLYRCRALVGRIGEELRKKKPE
Ga0182035_105359171	3300016341	Soil	MSDKFESLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSLADL
Ga0182034_103122073	3300016371	Soil	MLDKFESLDANEKGALESTLYRCRALAGRIGEELRKKKPEH
Ga0182034_104633733	3300016371	Soil	MSDEFDNLDANENAAVESTLYRCRALVGRIGEELRKKKPEHFVDERS
Ga0182037_101120104	3300016404	Soil	MSDRFNKFGSLDANKKAAVESTLYRCRALVGRIGEELRKKKPEHFVDERSLADLH
Ga0182037_116156921	3300016404	Soil	MLDKFESLDANEKGALESTLYRCRALAGRIGEELRKKKPEHFVDERSL
Ga0182037_120161552	3300016404	Soil	MSDKFGSLDANEKAAVESTLYRCRALVGRIGEELRKKKPEHFVDERSLADLHA
Ga0182039_107020101	3300016422	Soil	MSDKFGSLDANEKAAVESTLYRCRALVGRIGEELRKKKPEHFVDERSLADLH
Ga0182038_120884471	3300016445	Soil	MSDKFNKFGSLDANKKAAVESTLYRCRALVGRIGEELRKKKPEHFVDE
Ga0066662_119725902	3300018468	Grasslands Soil	MSDKFESLDANEKAAVESTLYRCRALVGRIGEELRQK
Ga0210399_106295201	3300020581	Soil	MSDKFESLDANKKAALESTLYRCRALVGRIAEELRKMKSEHF
Ga0210399_107863911	3300020581	Soil	MSDEFDNLNANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDKSSLADFYA
Ga0126371_107861662	3300021560	Tropical Forest Soil	MSDEFDNLDANEKAALESMLYRCRALAGRIGEELRKKKPEHFVDE
Ga0207646_105901741	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSDKFASLDATEKAALESTLYRCRALVGRIGEELRKKKPEHFVDEKSLADFH
Ga0207665_100056111	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSDKFERLDANEKAALESTLYRCRALVGWIGEELRKEKPDHFVDE
Ga0209159_12802362	3300026343	Soil	MSDKSENLDANEKAALESMLYRCRALVGRIGEELRKKKPEHFVDER
Ga0307282_106714841	3300028784	Soil	MSDKFESLDANEKAALESTLYRCRALVGRIGEELRKKKPDHFVDE
Ga0318541_102000501	3300031545	Soil	MPNKFKSLDANEKAALESTLYRCRALVGRIGEELRKKK
Ga0318541_103477631	3300031545	Soil	MSDKFGSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSLADLHASLLEQTI
Ga0318515_102528953	3300031572	Soil	MPNKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDER
Ga0310915_110294942	3300031573	Soil	MPYKFKSLDANQKAALESTLYRCRALVGRIGEKLRKKKPEHFVDERSLADFHASLEH
Ga0318542_107737561	3300031668	Soil	MSDKVGSLDANEKAAVESTLYRCRALVGRIGEELRKKKPEHFVDETSLADLH
Ga0306917_103886251	3300031719	Soil	MSDKFESLDANKKAALESTLYRCRALVGRIGEELRKKKPEHF
Ga0318500_103088181	3300031724	Soil	MPNKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSL
Ga0306918_111871351	3300031744	Soil	MSDKFKSLDANEKAAVESTLYRCRALVGRIGEELRKKKPEHFVD
Ga0318521_103761182	3300031770	Soil	MPNKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSLADFHAS
Ga0318521_107481041	3300031770	Soil	MPYKFKSLDANEKAALESTLYRCRALVGRIGEELRK
Ga0318546_102981072	3300031771	Soil	MPNKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDE
Ga0318543_102328151	3300031777	Soil	MSDKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSLADFHA
Ga0318498_103446391	3300031778	Soil	MSDKFGSLDANEKAAVESTLYRCRALVGRIGEELRKKKPEHFVDERS
Ga0318547_105605462	3300031781	Soil	MPNKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSLAD
Ga0318552_104774372	3300031782	Soil	MPNKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDKLSLADINA
Ga0318576_101533981	3300031796	Soil	MPNKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSLADFHASLEHA
Ga0318523_104056391	3300031798	Soil	MSDKFESLDANKKAALESTLYRCRALVGRIGEELRKKKPEHFVDESSLADLHA
Ga0318567_106981161	3300031821	Soil	MSDKFKSLDANEKAAVESTLYRCRALVGRIGEELRKKKPEHFV
Ga0310917_104150452	3300031833	Soil	MLDKFESLDANEKGALESTLYRCRALAGRIGEELRKKKPEHFV
Ga0306919_100497811	3300031879	Soil	MLDKFESLDANEKGALESTLYRCRALAGRIGEELRKKKPEHFVD
Ga0306919_101737583	3300031879	Soil	MSDEFDNLDANEKAALESTLYRCRALAGRIGEGLRKKKPEHFVDE
Ga0306925_116158271	3300031890	Soil	MPNKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDERSLA
Ga0306923_114410501	3300031910	Soil	MSDKFGSLDANEKAAVEPTLYRCRALVGRIGEELRKKKPEHFVDERSLADLHA
Ga0306921_101372631	3300031912	Soil	MSDKFENLDANEKAALESMLYRCRALVGRIGEELRKKKPEHFVDERSLADLH
Ga0306921_124683021	3300031912	Soil	MSDKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEH
Ga0310916_101729503	3300031942	Soil	MSDKFENLDANEKAALESMLYRCRALVGRIGEELREK
Ga0310913_100895884	3300031945	Soil	MSDRFNKFGSLDANKKAAVESTLYRCRALVGRIGEELRKKKPEHFVD
Ga0310913_105768193	3300031945	Soil	MSDKFENLDANEKAALESMLYRCRALVGRIGEELRKKKPEHFVDESSLADLHASL
Ga0310910_105496742	3300031946	Soil	MSDKFENLDANEKAALESMLYRCRALVGRIGEELRKKKPEHFVDES
Ga0310909_115729611	3300031947	Soil	MSDKFESLDANKRADLESTLYRCRALVGRIAEELRKMKPEHFV
Ga0306926_101426051	3300031954	Soil	MSDKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPE
Ga0306922_105624413	3300032001	Soil	MSDEFDNLDANEKAALESTLYRCRALAGRIGEGLRKKKPEHFVDERSFADF
Ga0318569_105854541	3300032010	Soil	MSDKFGSLDANEKAAVESTLYRCRALVGRIGEELRK
Ga0310911_101993351	3300032035	Soil	MSDKFESLDANAKAALESTLYRCRALAGRIGEELRKKKAEHFVDDLMRCECWPW
Ga0318532_101200301	3300032051	Soil	MPNKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVDERS
Ga0318533_106367451	3300032059	Soil	MPYKFKSLDANQKAALESTLYRCRALVGRIGEKLRKKKPEHFVDERSLAD
Ga0318533_107234901	3300032059	Soil	MSDKFESLDANAKAALESTLYRCRALAGRIGEELRKKKAEHFVDDLMR
Ga0318533_107977211	3300032059	Soil	MSDKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKP
Ga0318510_103752442	3300032064	Soil	MSDEFDNLDANEKAALESTLYRCRALAGRIGEGLRKKK
Ga0318514_103049591	3300032066	Soil	MPNKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVD
Ga0318577_100448181	3300032091	Soil	MPYKFKSLDANEKAALESTLYRCRALVGRIGEELRKKKPEHFVD
Ga0307471_1016273491	3300032180	Hardwood Forest Soil	MSDKSENLDANEKAALESMLCRCRALVGRIGEELRKK
Ga0306920_1003939874	3300032261	Soil	MSWCTMSDEFDNLDANENAAVESTLYRCRALVGRIGEELRKKK
Ga0310914_118186871	3300033289	Soil	MSDKFGSLDANEKAAVESTLYRCRALVGRIGEELRKKKPEHFVD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F068082

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences