NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F068155

Metagenome / Metatranscriptome Family F068155

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F068155
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 111 residues
Representative Sequence MFNARIALILAGLTFATWETIDIFWISFPAAAAVFAALFLSGTLWLWRRDSVRAALALMLLFAFEAAVAPTLGAMTVTKVADLTLALTGIALAITVVVTRRRTRASRPVSA
Number of Associated Samples 105
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 69.92 %
% of genes near scaffold ends (potentially truncated) 39.20 %
% of genes from short scaffolds (< 2000 bps) 86.40 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (92.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(18.400 % of family members)
Environment Ontology (ENVO) Unclassified
(28.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.600 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 65.47%    β-sheet: 0.00%    Coil/Unstructured: 34.53%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.78
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.29.13.1: Bacillus cereus metalloprotein-liked3dbya23dby0.79688
a.29.13.1: Bacillus cereus metalloprotein-liked3dbya13dby0.7948
a.29.13.1: Bacillus cereus metalloprotein-liked3d19a13d190.78345
a.216.1.1: I/LWEQ domaind1u89a11u890.77003
e.18.1.0: automated matchesd5aa5c_5aa50.76187


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF01596Methyltransf_3 6.40
PF07730HisKA_3 5.60
PF12697Abhydrolase_6 4.80
PF08281Sigma70_r4_2 4.00
PF07676PD40 4.00
PF01243Putative_PNPOx 2.40
PF06210DUF1003 1.60
PF00005ABC_tran 1.60
PF07568HisKA_2 0.80
PF00682HMGL-like 0.80
PF03860DUF326 0.80
PF02371Transposase_20 0.80
PF03435Sacchrp_dh_NADP 0.80
PF08507COPI_assoc 0.80
PF00528BPD_transp_1 0.80
PF13649Methyltransf_25 0.80
PF08241Methyltransf_11 0.80
PF07883Cupin_2 0.80
PF13539Peptidase_M15_4 0.80
PF08240ADH_N 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG2518Protein-L-isoaspartate O-methyltransferasePosttranslational modification, protein turnover, chaperones [O] 6.40
COG4122tRNA 5-hydroxyU34 O-methylase TrmR/YrrMTranslation, ribosomal structure and biogenesis [J] 6.40
COG4123tRNA1(Val) A37 N6-methylase TrmN6Translation, ribosomal structure and biogenesis [J] 6.40
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 5.60
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 5.60
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 5.60
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 5.60
COG4420Uncharacterized membrane proteinFunction unknown [S] 1.60
COG3547TransposaseMobilome: prophages, transposons [X] 0.80
COG3920Two-component sensor histidine kinase, HisKA and HATPase domainsSignal transduction mechanisms [T] 0.80


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.00 %
UnclassifiedrootN/A8.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_122816282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1431Open in IMG/M
3300002568|C688J35102_120650568All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300004479|Ga0062595_100389635All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300005167|Ga0066672_10218386All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1220Open in IMG/M
3300005175|Ga0066673_10766276All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Phocaeicola → Phocaeicola abscessus553Open in IMG/M
3300005176|Ga0066679_10326403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1001Open in IMG/M
3300005179|Ga0066684_10091084All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1848Open in IMG/M
3300005181|Ga0066678_10706884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium671Open in IMG/M
3300005187|Ga0066675_10147739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1610Open in IMG/M
3300005327|Ga0070658_10110553All Organisms → cellular organisms → Bacteria2276Open in IMG/M
3300005336|Ga0070680_100003667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria11474Open in IMG/M
3300005337|Ga0070682_101073471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium673Open in IMG/M
3300005338|Ga0068868_101053608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia746Open in IMG/M
3300005436|Ga0070713_100299617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1480Open in IMG/M
3300005436|Ga0070713_100972795All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300005436|Ga0070713_101929111All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300005439|Ga0070711_100839771All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium781Open in IMG/M
3300005440|Ga0070705_100005119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6369Open in IMG/M
3300005451|Ga0066681_10588833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia686Open in IMG/M
3300005458|Ga0070681_11780301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium543Open in IMG/M
3300005467|Ga0070706_100058654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3552Open in IMG/M
3300005467|Ga0070706_100246363All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1669Open in IMG/M
3300005526|Ga0073909_10322873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria708Open in IMG/M
3300005549|Ga0070704_100190226All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1649Open in IMG/M
3300005553|Ga0066695_10731423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium577Open in IMG/M
3300005557|Ga0066704_10635219All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia681Open in IMG/M
3300005560|Ga0066670_10720881Not Available604Open in IMG/M
3300005576|Ga0066708_10757153All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium612Open in IMG/M
3300005586|Ga0066691_10448785All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium770Open in IMG/M
3300005587|Ga0066654_10741836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium553Open in IMG/M
3300005615|Ga0070702_100463959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria922Open in IMG/M
3300006028|Ga0070717_10734083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium898Open in IMG/M
3300006032|Ga0066696_10070138All Organisms → cellular organisms → Bacteria2028Open in IMG/M
3300006034|Ga0066656_10270403All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300006163|Ga0070715_10899279All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300006173|Ga0070716_101175991All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300006173|Ga0070716_101292400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium589Open in IMG/M
3300006175|Ga0070712_100699579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium864Open in IMG/M
3300006175|Ga0070712_101697486All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → unclassified Ralstonia → Ralstonia sp. NFACC01553Open in IMG/M
3300006237|Ga0097621_100282095Not Available1462Open in IMG/M
3300006755|Ga0079222_12309606All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Thermomonas → Thermomonas fusca537Open in IMG/M
3300006804|Ga0079221_10441950All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium822Open in IMG/M
3300006854|Ga0075425_102636269All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300006954|Ga0079219_10075536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1560Open in IMG/M
3300009012|Ga0066710_103849289Not Available563Open in IMG/M
3300009012|Ga0066710_104782707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium506Open in IMG/M
3300009098|Ga0105245_10278374All Organisms → cellular organisms → Bacteria1634Open in IMG/M
3300009098|Ga0105245_11010952All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium876Open in IMG/M
3300009137|Ga0066709_100062108All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4317Open in IMG/M
3300009137|Ga0066709_101234828All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1099Open in IMG/M
3300009137|Ga0066709_101895183All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium830Open in IMG/M
3300009176|Ga0105242_10199972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1774Open in IMG/M
3300009176|Ga0105242_10287047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1497Open in IMG/M
3300010320|Ga0134109_10237757Not Available683Open in IMG/M
3300010321|Ga0134067_10281849Not Available635Open in IMG/M
3300010322|Ga0134084_10167300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium750Open in IMG/M
3300010325|Ga0134064_10208504All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium704Open in IMG/M
3300010326|Ga0134065_10317152All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium602Open in IMG/M
3300010337|Ga0134062_10247347All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium828Open in IMG/M
3300010371|Ga0134125_10219399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2114Open in IMG/M
3300010400|Ga0134122_10080033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2554Open in IMG/M
3300012011|Ga0120152_1053056All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1296Open in IMG/M
3300012200|Ga0137382_10150269All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1578Open in IMG/M
3300012200|Ga0137382_11165701All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium549Open in IMG/M
3300012208|Ga0137376_11545388All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium555Open in IMG/M
3300012941|Ga0162652_100018838All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium945Open in IMG/M
3300012951|Ga0164300_11203017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300012955|Ga0164298_10328804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium959Open in IMG/M
3300012955|Ga0164298_11464351All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium531Open in IMG/M
3300012957|Ga0164303_10424698All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium828Open in IMG/M
3300012958|Ga0164299_10826228All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium664Open in IMG/M
3300012960|Ga0164301_10031290All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2540Open in IMG/M
3300012976|Ga0134076_10374456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium630Open in IMG/M
3300012986|Ga0164304_10083853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1852Open in IMG/M
3300012986|Ga0164304_10516694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium875Open in IMG/M
3300012986|Ga0164304_10884376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium697Open in IMG/M
3300012986|Ga0164304_11762784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium518Open in IMG/M
3300012987|Ga0164307_10061718All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2201Open in IMG/M
3300012987|Ga0164307_11607438All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium550Open in IMG/M
3300012988|Ga0164306_10290480All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1189Open in IMG/M
3300012988|Ga0164306_10549622All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium896Open in IMG/M
3300012989|Ga0164305_10145710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1599Open in IMG/M
3300012989|Ga0164305_10329515All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1141Open in IMG/M
3300013104|Ga0157370_11012112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium752Open in IMG/M
3300013296|Ga0157374_10673819All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1046Open in IMG/M
3300013297|Ga0157378_10787996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium976Open in IMG/M
3300013307|Ga0157372_11076185All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium930Open in IMG/M
3300013765|Ga0120172_1158623All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium533Open in IMG/M
3300013772|Ga0120158_10417994All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium612Open in IMG/M
3300015371|Ga0132258_10331749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3755Open in IMG/M
3300018431|Ga0066655_10224420All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1180Open in IMG/M
3300018482|Ga0066669_10735926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium870Open in IMG/M
3300019887|Ga0193729_1000004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria169861Open in IMG/M
3300019890|Ga0193728_1267325All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium673Open in IMG/M
3300020070|Ga0206356_10430574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium936Open in IMG/M
3300020081|Ga0206354_11261480All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1308Open in IMG/M
3300022467|Ga0224712_10542445All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium565Open in IMG/M
3300024187|Ga0247672_1070149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium595Open in IMG/M
3300024249|Ga0247676_1048154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium694Open in IMG/M
3300025898|Ga0207692_10328739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium937Open in IMG/M
3300025905|Ga0207685_10015985All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2391Open in IMG/M
3300025910|Ga0207684_10424728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1142Open in IMG/M
3300025915|Ga0207693_10375796All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1112Open in IMG/M
3300025916|Ga0207663_10621111All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium851Open in IMG/M
3300025916|Ga0207663_11558224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium532Open in IMG/M
3300025917|Ga0207660_10530923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium956Open in IMG/M
3300025928|Ga0207700_10859096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium812Open in IMG/M
3300025934|Ga0207686_10177433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1508Open in IMG/M
3300025939|Ga0207665_11226857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium598Open in IMG/M
3300026078|Ga0207702_10873892All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium890Open in IMG/M
3300026318|Ga0209471_1043432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2122Open in IMG/M
3300026325|Ga0209152_10472128All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium510Open in IMG/M
3300026330|Ga0209473_1234822Not Available650Open in IMG/M
3300026542|Ga0209805_1131932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1170Open in IMG/M
3300026547|Ga0209156_10373936Not Available605Open in IMG/M
3300026552|Ga0209577_10850320Not Available511Open in IMG/M
3300027821|Ga0209811_10031357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1771Open in IMG/M
3300028881|Ga0307277_10099003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1235Open in IMG/M
3300031226|Ga0307497_10747088All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium509Open in IMG/M
3300031740|Ga0307468_100033927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2473Open in IMG/M
3300031740|Ga0307468_101711622All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium592Open in IMG/M
3300031939|Ga0308174_10362706All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1158Open in IMG/M
3300032174|Ga0307470_10214086All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1243Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere18.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil16.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil16.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.60%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.60%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.40%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.40%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.40%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.40%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.40%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.60%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.60%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.60%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.80%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.80%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.80%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012941Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013765Permafrost microbial communities from Nunavut, Canada - A30_80cm_6MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024187Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13EnvironmentalOpen in IMG/M
3300024249Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_12281628213300000956SoilMFNARIALILAGLAFATWEAVDIFWISFPAAAAVFAALFLGSTLWYWRHDSLRAVAALTLLFAFEAAVAPTLKAMTVTKAVDFTLALTGIAFAVTVLMNRRQARTSRPLAA*
C688J35102_12065056833300002568SoilMFTARSALTLAGLAFATWEAVDIFWISTPAVAAVMAVLFFSCTMWYWRRDSLRAAVGLLVLFAFEGAVTPTLKAMTVTKSADLALSIVGIALAVTVIAGRRRRGQASSAVGKSRSA*
Ga0062595_10038963523300004479SoilMFNTRTALIFAGLAFTTWETVDIFWISFPAAAAVFAGLFLGGTLWFWRRNSVPAAATLGILFAFEGAVAPTLRAMTVTKVADFTLALVGVFLTITVLLALRRTTAARCQWPLAEKCM*
Ga0066672_1021838623300005167SoilMFNPRIALILTGLTFAIWETIDIFWISFPAAAAVFAALFLSGTLWFWRRDSVRAALALMLLFAFEAAVAPTLGAMTVTKVADFTVALTGIALAITVVVTRRRTRATRPVSA*
Ga0066673_1076627613300005175SoilMSNARIALILAGLTFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTGIVLAITVVVARRRTRASRPVSA*
Ga0066679_1032640313300005176SoilMLNSRTALILAGLTFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTGIALAITVVVARRRGRASRPVSAY*
Ga0066684_1009108433300005179SoilMLNSRAALILAGLMFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTGIVLAITVVVARRRTRASRPVSA*
Ga0066678_1070688423300005181SoilMFNARIALILAGLTFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTG
Ga0066675_1014773913300005187SoilMLNSRTALILAGLTFATWETVDIFWISFPAAAAVFAALFLVSTFWLWRRDSIRAALALLLLFAFEATVAPTLKAMTVTKVVDLTLALTGIALAI
Ga0070658_1011055333300005327Corn RhizosphereVVTARNALILAGLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWAAGALLALFVFEGAVAPTLKAETVTKVADLALAIVGFVLAAIVIVQRRRGQAPAASSG*
Ga0070683_10011278433300005329Corn RhizosphereVVTARNALILAGLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWAAGALLALFVFEGAVAPTLKAETVTKVADLALESWGSCSRPS*
Ga0070680_10000366733300005336Corn RhizosphereVVTARNALILAGLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWGAGALLALFVFEGAVAPTLKAETVTKVADLALAIVGFVLAAIVIVQRRRGQAPAASSG*
Ga0070682_10107347113300005337Corn RhizosphereHVVTARNALILAGLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWAAGALLALFVFEGAVAPTLKAETVTKVADLALAIVGFVLAAIVIVQRRRGQAPAASSG*
Ga0068868_10105360813300005338Miscanthus RhizosphereVVTARNALILAGLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWAAGALLALFVFEGAVAPTLKAETVTKVADLALAIVGFVL
Ga0070713_10029961713300005436Corn, Switchgrass And Miscanthus RhizosphereMFNLRVALILAGLSFAIWETVDIFWISVPAFAALFAALFLASTIWFLRRDSIRAALALTLLFAFEAAAAPTLNAMPVTKVADFTLALTGIAVGVAVFVTRRPKRASRTMVA*
Ga0070713_10097279523300005436Corn, Switchgrass And Miscanthus RhizosphereMSTRTGLILAGLTFASWEAIDIFWISVPAAAAVFAALFLGSSMWFWRRNSLRAALALMLLFAFEAAVAPTLRAMTVTKVADLTLALTGIALAATVVVKRRRTRASWPVSARRHGAHAWRSLTPRQRNRAATNARSIPQLRKESR*
Ga0070713_10192911123300005436Corn, Switchgrass And Miscanthus RhizosphereLTFATWETVDIFWISFPAAAAVFAAMFLAGTFWFWRRDSIRAAAALMVLFAFEGAVAPTLKAMTVTKVADFTLALTGIALTMAVLVTRRRRKSVGTVAA*
Ga0070711_10083977123300005439Corn, Switchgrass And Miscanthus RhizosphereMSNTRTGLIVAGLTFATWEAVDIFWISVPAFAAVFAALFLGSTLWFWRRNSPRAAAVLIALFAFEGVVAPTLRAMTVTKVADFTLALAGVLLAVVVLVTRRGSRPPRAVGARRAVRPSTEP*
Ga0070705_10000511933300005440Corn, Switchgrass And Miscanthus RhizosphereVFNTRVALILAGLAFAIWETIDIFWISFPAAAAVFAALFLGGTLWLWRRNSVRAALVLLLLFAFEAAVAPTLRAMTVTKVVDLALAFTGIALAMTVVVTRRRTRASQPVSA*
Ga0066681_1058883313300005451SoilMLNARRALILAGLAFAAWETVDIFWISFPLAAAVFAVLFLSCTIWFWRRDSVRAALALMLLFAFEAAAAPTLKAMTVTKAIDLALALTGIALAATVLLARRRTRT
Ga0070681_1178030113300005458Corn RhizosphereMFKARTALILAGLAFATWETIDIFWISFPAAAAVFAALFLTATLWFWRRDSVRAVLALLLLFGFEAAVAPTLGAMTVTKVADLTLAITGIALAMTVVVTRRRARAPRPVSA*
Ga0070706_10005865433300005467Corn, Switchgrass And Miscanthus RhizosphereVNSREGRFAHPSQKVHLEKEHAVLNARIALILTGLAFAVWEAVDIFWIDVPAAPAVLAGLFLGCTLWFWRADSVRAAVALMVLFAFEDAVAPSLKHVMTVTKVADFTLSTGGIALAVAVLVTRRRTRRSRAVAA*
Ga0070706_10024636323300005467Corn, Switchgrass And Miscanthus RhizosphereMFNARIALILAGLTFATWETVDIFWISFPAAAAVFATLFLGATLWYWRRESLRAVLALMLLFAFEAAVAPTLKAMTVTKVADITLALTGIALAITVVVTRRRTKASRAVAA*
Ga0073909_1032287323300005526Surface SoilMYNTRVALILAGLAFATWETIDIFWISFPAAAAVFAALFLGGTLWLWRRNSVRAALVLLLLFAFEAAVAPTLRAMTVTKVADLALALTGIALAMTVVVTRPRTRASQPVSA*
Ga0070704_10019022613300005549Corn, Switchgrass And Miscanthus RhizosphereTRVALILAGLAFAIWETIDIFWISFPAAAAVFAALFLGGTLWLWRRNSVRAALVLLLLFAFEAAVAPTLRAMTVTKVVDLALAFTGIALAMTVVVTRRRTRASRPVSA*
Ga0066695_1073142313300005553SoilMFNARIALILAGLTFATWETIDIFWISFPAAAAVFAALFLSGTLWLWRRDSVRAALALMLLFAFEAAVAPTLKAMTVTKVADFTLALTGIALAITVVVTRRRARASRPVSA*
Ga0066704_1063521913300005557SoilAGLTFATWETIDIFWISFPAAAAVFAALFLSGTLWFWRRDSVRAALALMLLFAFEAAVAPTLGAMTVTKVADFTVALTGIALAITVVVTRRRTRATRPVSA*
Ga0066670_1072088123300005560SoilWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRATLVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTGIVLAITVVVARRRTRASRPVSA*
Ga0066708_1075715323300005576SoilMLNSRAALILAGLTFATWETVDIFWISFPPAAAVCAALFLVSTFWLWRRDSVRAALVLLLLFAFEGAVAPTLGAMTVTKVADLTLALTGVALAITVVVTRRRTRA
Ga0066691_1044878523300005586SoilMLNSRTALILAGLTFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTGIALAITVVVA
Ga0066654_1074183623300005587SoilMFNPRIALILTGLTFAIWETIDIFWISFPAAAAVFAALFLSGTLWLWRRDSIRAALALMLLFAFEAAVAPTLRAMTVTKVADLTLALTGIALATTVVVTRRRTRA
Ga0070702_10046395923300005615Corn, Switchgrass And Miscanthus RhizosphereVFNTRVALILAGLAFATWETIDIFWISFPAAAAVFAALFLGGTLWLWRRNSVRAALVLLLLFAFEAAVAPTLRAMTVTKVVDLALAFTGIALAMTVVVTRRRTRASQPVSA*
Ga0070717_1073408323300006028Corn, Switchgrass And Miscanthus RhizosphereMFNLRVALILAGLSFAIWETVDIFWISVPAFAVLFAALFLASTIWFLRRDSICAALALTLLFAFEAAAAPTLNAMPVTKVADFTLALTGIAVGVAVFVTRRPKRASRTMVA*
Ga0066696_1007013823300006032SoilMLNSRAALILAGLTFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTGIALAITVVVARRRGRASRPVSAY*
Ga0066656_1027040323300006034SoilMLNSRVALILAGLTFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTGIVLAITVVVARRRTRASRPVSA*
Ga0070715_1089927913300006163Corn, Switchgrass And Miscanthus RhizosphereVFNTRVALILAGLAFAIWETIDIFWISFPAAAAVFAALFLGGTLWLWRRNSVRAALVLLLLFAFEAAVAPTLRAMTVTKVVDLALAFTGIALAMTVVVTRRRTRAS
Ga0070716_10117599113300006173Corn, Switchgrass And Miscanthus RhizosphereMSTRTGLILAGLTFASWEAIDIFWISVPAAAAVFAALFLGSSMWFWRRNSLRAALALMLLFAFEAAVAPTLRAMTVTKVADLTLALTGIALATTVVVKRRRTRASWPVSARRHGAH
Ga0070716_10129240013300006173Corn, Switchgrass And Miscanthus RhizosphereMINARNALIFVGLAFATWETVNIFWISFPAAAVVMAALFLISTIWFWRRDSLRAAVALLLLCAFEGVIAPTLNAMTVTKAADLALAVTGVALGTAVIVGRRRKHPSQAVQV*
Ga0070712_10069957923300006175Corn, Switchgrass And Miscanthus RhizosphereMFKARTNLILAGLMFATWETIDIFWISFPAAAAVFAVLFFGSTLWFWRRDSIRAAIALALLFAFEGAVAPTLKAMTVTKVADLALALTGLALAITVVVTRRERTSPAVVA*
Ga0070712_10169748613300006175Corn, Switchgrass And Miscanthus RhizosphereMFKARTALILAGLAFATWETIDIFWISFPAAAAVFAALFLTATLWFWRRDSVRAVLALLLLFGFEAAVAPTLGAMTVTKVADLTLAVTGIALAITVVVTRRRARAPRPVSA*
Ga0097621_10028209513300006237Miscanthus RhizosphereMFSTRTALILAGLSFATWETFDIFWISFPAAAAIFAALFLSTTLWFQRRNSVRAAVALGMLFAFEGAVAPTLRVMTVTKVADFTIALAGALLTITLLATKYRTKTARESPPTIAQQPGDLGTQTF*
Ga0079222_1230960613300006755Agricultural SoilHLVFNLRAALILAGLSFAIWETVDIFWISVPAFAALFAALFVGSTVWYSRRDSTRAALALTLLFAFEAAAAPTLNAMPVTKATDLTLALTGIVLGVAVFVTRRPKRASRARIA*
Ga0079221_1044195013300006804Agricultural SoilLVLAGVSFAIWETIDIFWIDFPPAAALFAVLFAGCTFWFWRRDSARAAVALLVLFAFECAVVPSLKAMTVTKVGDFSLVLVGVAAAVAVLVARRRSGPSRAVAA*
Ga0075425_10263626913300006854Populus RhizosphereVVTARNALILAGLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWAAGALLALFVFEGAVAPTLKAETVTKVADLALAIVGF
Ga0079219_1007553623300006954Agricultural SoilMFTPRNALILAGLTFATWETVDIFWISFPAAAAVMAALFLGCTIWYQRRDSLRAAAALMLLFTFEGTVAPTLKAMTVTKVTDLTLALTGIALALTVIVGRLRNPASRAVGA*
Ga0066710_10384928913300009012Grasslands SoilALILAGLTFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSIRATLVLLLLFVFEAAVAPTLGAMTVTKVADLTLALTGIVLAITVVVARRRTRASRPVSA
Ga0066710_10478270713300009012Grasslands SoilMFNVRIALILAGLTFATWETIDIFWISFPAAAAVFAALFLGGTLWLWRRDSVRAAVALMLLFAFEAAVAPTLKAMTVTKVADFTLALTGIALAITVVVTRRRTRASRPVSA
Ga0105245_1027837433300009098Miscanthus RhizosphereLPGLSFATWETFDIFWISFPAAAAIFAALFLSTTLWFQRRNSVRAAVALGILFAFEGAVAPTLRVMTVTKVADFTIALAGALLTITLLATKYRTKTARESPPTIAQQPGDLGTQTF*
Ga0105245_1101095223300009098Miscanthus RhizosphereVVTARNALILAGLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWAAGALLALFVFEGAVAPTLKAETVTKVADLALAIVGFVLAAIVIVQRRRGQ
Ga0066709_10006210853300009137Grasslands SoilMFNARIALILAGLTFATWETIDIFWISFPAAAAVFAALFLGGTLWLWRRDSVRAAVALMLLFAFEAAVAPTLKAMTVTKVADFTLALTGIALAITVVVTRRRTRASRPVSA*
Ga0066709_10123482823300009137Grasslands SoilMLNARRALILAGLAFAAWETVDIFWISFPLAAAVFAVLFLSCTIWFWRRDSVRAALALMLLFAFEAAAAPTLKAMTVTKAIDLALALTGIDLAATVLLA
Ga0066709_10189518313300009137Grasslands SoilMFNARIALILAGLTFATWETIDIFWISFPAAAAVFAALFLSGTLWLWRRDSVRAALALMLLFAFEAAVAPTLRAMTVTKVADLTLALTGIALAITVVVTRRPTRASRPVSA*
Ga0105242_1019997233300009176Miscanthus RhizosphereMYNTRVALILAGLAFATWETIDIFWISFPAAAAVFAALFLGGTLWLWRRNSVRAAVVLLLLFAFEAAVAPTLRAMTVTKVADLALALTGIALAMTVVVTRPRTRASQPVSA*
Ga0105242_1028704723300009176Miscanthus RhizosphereLPGLSFATWETFDIFWISFPAAAAIFAALFLSTTLWFQRRNSVRAAVALGMLFAFEGAVAPTLRVMTVTKVADFTIALAGALLTITLLATKYRTKTARESPPTIAQQPGDLGTQTF*
Ga0134109_1023775713300010320Grasslands SoilVSSRGQLRSRFAEARSRKEQPMFNARIALILAGLTFATWETIDIFWISFPAAAAVFAALFLSGTLWLWRRDSIRAALALMLLFAFEAAVAPTLRAMTVTKVADLTLALTGIALAITVVVTRRRTRASRPVSA*
Ga0134067_1028184913300010321Grasslands SoilMLNSRVALVLAGLAFAAWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTGIVLAITVVVARRRTRASRPVSA*
Ga0134084_1016730013300010322Grasslands SoilMFDARIALILAGLTFATWETIDIFWISFPTAAAVFAALFLSGTLWLWRRDSVRAALALMLLFAFEAAVAPTLRAMTVTKVADLTLALTGIALAITVVVTRRPTRASRPVSA*
Ga0134064_1020850423300010325Grasslands SoilMLNSRAALILAGLTFATWETIDIFWISFPAAAAVFAALFLSATLWLWRRGSVRAVLALMLLFAFEAAVAPTLRAMTVTRVADLTLALTGIALAITVLVTRRRMRA
Ga0134065_1031715213300010326Grasslands SoilMLNSRAALILAGLTFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTGIVLAITVVVARRRTRASRPVSA*
Ga0134062_1024734713300010337Grasslands SoilMLNSRAALILAGLTFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTGVALAITVVVTRRRTRASRPVSA*
Ga0134125_1021939943300010371Terrestrial SoilVKSDLERSTRVFNTRVALILAGLAFAIWETIDIFWISFPAAAAVFAALFLGGTLWLWRRNSVRAALVLLLLFAFEAAVAPTLRAMTVTKVVDLALAFTGIALAMTVVVTRRRTRASQPVSA*
Ga0134122_1008003343300010400Terrestrial SoilVKSNLERNKPMFNARIALILAGLAFATWEAIDVFWISVPALAAVFAVLFLGGTLWLWRRNSVGAALVLLLLFAFEAAVAPTLRAMTVTKVADLTLALTGVALAMTVVVRPRRTRASRRV
Ga0120152_105305613300012011PermafrostMLNARAGLILAGLAFATWETIDIFWISFPAAAAVFAALFLGGTIWLWRRDSVRAALALMLLFAFEAAVAPTLKAMTVTKVADLTLALTGIALAITVVVTRRRTRASRPVSG*
Ga0137382_1015026923300012200Vadose Zone SoilMLNSRAALILAGLTFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADITLALTGIALAITVVVARRRTRASRPVSAY*
Ga0137382_1116570113300012200Vadose Zone SoilMFNARIALILAGLTFATWETIDIFWISFPASAAVFAALFLGGTLWLWRRDSVRAAVALMLLFAFEAAVAPTLKAMTVTKVADFTLALTGIALAITVVVTRRRTRASRPVSA*
Ga0137376_1154538813300012208Vadose Zone SoilMLNSRAALILAGLTFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADITLALTGIASAITVVVARRRTRASRPVSAY*
Ga0162652_10001883813300012941SoilMFNARIALILAGLAFATWETIDMFWISFPAAAAVFAALFLSGTLWLWRRDSVRAALALLLLFAFEAAVAPTLRAMTVTKVADLTLALTGIALAITVVATRRRARPSRPVSA*
Ga0164300_1120301713300012951SoilMFNTRVALILAGLAFAIWEMIDIFWISFPAAAAVFAALFLGGTLWLWRRDSVRAALALLLLFAFEAAVAPTLRAMTVTKVADLSLALTGVALAMTVVVTRRRTRASRPVSA*
Ga0164298_1032880423300012955SoilVKSDLERSTRVFNTRVALILAGLAFAIWEMIDIFWISFPAAAAVFAALFLGGTLWLWRRDSVRAALALLLLFAFEAAVAPTLRAMTVTKVADLSLALTGVALAMTVVVTRRRTRASRPVSA*
Ga0164298_1146435123300012955SoilMLNARTGLILAGLTFATWETVDIFWISFPAAAAVFAAMFLAGTFWFWRRDSIRAAAALMVLFAFEGAVAPTLKAMTVTKVADFTLALTGIALTMAVLVTRRRRKSVGTVAA*
Ga0164303_1042469813300012957SoilMFKARTALILAGLAFATWEAIDIFWISFPAAAAAFAALFLTATLWFWRRDSVRAVLALLLLFGFEAAVAPTLGAMTVTKVADLTLAITGIALAMTVVVTRRRARAPRPVSA*
Ga0164299_1082622823300012958SoilMMFNARIALILAGLTFATWETIDIFWISVPAAAAVFAALFLGGTLWLWRRNSVRAALVLLLLFAFEAIVAPTLRAMTVTKVADVMLALTGMALALTVVATRRRTKA
Ga0164301_1003129013300012960SoilRQQLFSKGVHMLNARTGLILAGLTFATWETVDIFWISFPAAAAVFAAMFLAGTVWFWRRDSIRAAAALMVLFAFEGAVAPTLKAMTVTKVADFTLALTGIALTMAVLVTRRRRKSVGTVAA*
Ga0134076_1037445623300012976Grasslands SoilFATWETIDIFWISFPAAAAVFAALFLSGTLWLWRRDSVRAALALMLLFAFEAAVAPTLRAMTVTKVADLTLALTGIALAITVVVTRRRTRATRPVSA*
Ga0164304_1008385323300012986SoilMFKARTALILAGLAFAIWETIDIFWISFPAAAAVFAALFLTATLWFWRRDSVRAVLALLLLFGFEAAVAPTLGAMTVTKVADLTLAITGIALAMTVVVTRRRARAPRPVSA*
Ga0164304_1051669423300012986SoilDKPMFTTRVALILAGLAFAIWEMIDIFWISFPAAAAVFAALFLGGTLWLWRRNSVRAALVLLLLFAFEAAAAPTLRAMTVTKVADLSLALTGVALAMTVVVTRRRTRASRPVSA*
Ga0164304_1088437613300012986SoilVKSDLERSTRVFNTRVALILAGLAFAIWETIDIFWISFPAAAAVFAALFLGGTLWLWRRNSVRAALVLLLLFAFEAAVAPTLRAMTVTKVADVMLALTGMALALTVVATRRRTKASRPVSV*
Ga0164304_1176278413300012986SoilMFNTRIALILAGLAFATWETVDIFWISFPAAAAVMAALFLGCTLWYRRRYTLRAAAALLLLFTFEGAVAPTLNAMTVTKVADLALALTGIALATTVIIGQRRN
Ga0164307_1006171833300012987SoilVKSDLERSSRVFNTRVALILAGLAFAIWEMIDIFWISFPAAAAVFAALFLGGTLWLWRRDSVRAALALLLLFAFEAAVAPTLRAMTVTKVADLSLALTGVALAMTVVVTRRPRGPRDPSLRERHQTGPPS*
Ga0164307_1160743813300012987SoilAFATWETIDIFWISFPAAAAVFAALFLTATLWFWRRDSVRAVLALLLLFGFEAAVAPTLGAMTVTKVADLALAITGIALAMTVVVTRRRARAPRPVSA*
Ga0164306_1029048023300012988SoilQLFSKGVHMLNARTGLILAGLTFTTWETVDIFWISFPAAAAVFAAMFLAGTFWFWRRDSIRAAAALMVLFAFEGAVAPTLKAMTVTKVADFTLALTGIALTMAVLVTRRRRKSVGTVAA*
Ga0164306_1054962213300012988SoilVKSDLERSSRVFNTRVALILAGLAFAIWEMIDIFWISFPAAAAVFAALFLGGTLWLWRRNSVRAALVLLLLFAFEAAVAPTLRAMTVTKVADLSLALTGVALAMTVV
Ga0164305_1014571013300012989SoilTALILAGLAFATWETIDIFWISFPAAAAVFAALFLTATLWFWRRDSVRAVLALLLLFGFEAAVAPTLGAMTVTKVADLTLAITGIALAMTVVVTRRRARAPRPVSA*
Ga0164305_1032951523300012989SoilMFNTRVALILAGLAFAIWETIDIFWISFPAAAAVFAALFLGGTLWLWRRNSVRAALVLLLLFAFEAAVAPTLRAMTVTKVVDLALAFTGIALAMTVVVTRRRTRASQPVSA*
Ga0157370_1101211213300013104Corn RhizosphereHVVTARNALILAGLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWAAGALLALFVFEGAVAPTLKAETVTKVADLALAIVGFMLAAIVIVQRRRGQAPAASSG*
Ga0157374_1067381913300013296Miscanthus RhizosphereMEETMFSTRTALILAGLSFATWETFDIFWISFPAAAAIFAALFLSTTLWFQRRNSVRAAVALGILFAFEGAVAPTLRVMTVTKVADFTIALAGALLTITLLATKYRTKTARESPPTIAQQPGDLGTQTF*
Ga0157378_1078799613300013297Miscanthus RhizosphereVKSDLERSTRVFNTRVALILAGLAFATWETIDIFWISFPAAAAVFAALFLGGTLWLWRRNSVRAALVLLLLFAFEAAVAPTLRAMTVTKVVDLALAFTGIALAMTVVVTRRRTRASQPVS
Ga0157372_1107618513300013307Corn RhizosphereMEETMFSTRTALILAGLSFATWETFDIFWISFPAAAAIFAALFLSTTLWFQRRNSVRAAVALGILFAFEGAVAPTLRVMTVTKVADFTIALAGALLTITLLATKYRTKTARESPPTIAQQPGDLGTQT
Ga0120172_115862323300013765PermafrostMFNARAGLILAGLAFATWETIDIFWISFPAAAAVFAALFLGGTIWLWRRDSVRAALALMLLFAFEAAVAPTLKAMTVTKVADLTLALTGIALAITVVV
Ga0120158_1041799413300013772PermafrostMFNARIALILAGLTFATWETVDIFWISFPAAAAVFAALFLGCTLSFWRRDSLRAALALMLLFAFEAAVAPTLKAMTVTKVADLTLALTGIVLAVAVVVTRRRTRASRPVSG*
Ga0132258_1033174953300015371Arabidopsis RhizosphereMSMFNVRGALILAGLTFAIWETVDIFWISFPAAAAVFAALFLGSTVWFSRRDSVRSAMLLTLLFAFEAAAAPTLKAMAVTKVTDFTLALTGIALGIVLVVTRRRTQTSRAMVA*
Ga0066655_1022442023300018431Grasslands SoilMFNARIALILAGLTFATWETIDIFWISFPAAAAVFAALFLSGTLWLWRRDSVRAALALMLLFAFEAAVAPTLGAMTVTKVADLTLALTGIALAITVVVTRRRTRASRPVSA
Ga0066669_1073592623300018482Grasslands SoilMLNSRAALILAGLTFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTGIVLAITVVVARRRTRASRPVSA
Ga0193729_10000041463300019887SoilMFNARIALILAGLTFATWETIDIFWISFPAAAAVFAALFLSGTIWLWRRDSVRAAMALMLLFAFEAAVAPTLRAMTVTKVADLTLALTGIALAMTVVVIRRRTRASQPISA
Ga0193728_126732523300019890SoilMFNARIALILAGLTFATWETIDIFWISFPPAAAVFAALFLGTTLWFWRRESLRAVLALMLLFAFEAAVAPTLKAMTVTKVADFTLALTGIALAITVVVTRRRTRASRAVAA
Ga0206356_1043057423300020070Corn, Switchgrass And Miscanthus RhizosphereLILAGLAFATWETIDIFWISFPAAAAVFAALFLTATLWFWRRDSVRAVLALLLLFGFEAAVAPTLGAMTVTKVADLTLAVTGIALAITMVVTRRRARAPRPVSA
Ga0206354_1126148033300020081Corn, Switchgrass And Miscanthus RhizosphereVVTARNALILAGLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWAAGALLALFVFEGAVAPTLKAETVTKVADLALAIVSFVLAAIVIVQRRRGQAPAASSG
Ga0224712_1054244523300022467Corn, Switchgrass And Miscanthus RhizosphereFHVVTARNALILAGLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWAAGALLALFVFEGAVAPTLKAETVTKVADLALAIVGFVLAAIVIVQRRRGQAPAASSG
Ga0247672_107014913300024187SoilRGFHVVTARNALILAGLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWAAGALLALFVFEGAVAPTLKAETVTKVADLALAIVGFVLAAIVIVQRRRGQAPAASSG
Ga0247676_104815423300024249SoilVVTARNALILAGLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWAAGALLALFVFEGAVAPTLKAETVTKVADLALAIVGFVLAAIVIVQRRRGQAPAASSG
Ga0207692_1032873913300025898Corn, Switchgrass And Miscanthus RhizosphereMSNTRSGLIVAGLTFATWEAVDIFWISVPAAAAVFAALFLGSSMWFWRRNSLRAGLALMLLFAFEAAVAPTLRAMTVTKVADLTLALTGIALATTVVVK
Ga0207685_1001598543300025905Corn, Switchgrass And Miscanthus RhizosphereVFKTRVALILAGLAFAIWEMIDIFWISFPAAAAVFAALFLGGTLWLWRRDSVRAALALLLLFAFEAAVAPTLRAMTVTKVADLSLALTGVALATTVVVTRRRMRASRPVSA
Ga0207705_1047339723300025909Corn RhizosphereLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWAAGALLALFVFEGAVAPTLKAETVTKVADLALAIVGFVLAAIVIVQRRRGQAPAASSG
Ga0207684_1042472813300025910Corn, Switchgrass And Miscanthus RhizosphereMFNARIALILAGLTFATWETVDIFWISFPAAAAVFATLFLGATLWYWRRESLRAVLALMLLFAFEAAVAPTLKAMTVTKVADITLALTGIALAITVVVT
Ga0207693_1037579633300025915Corn, Switchgrass And Miscanthus RhizosphereMFKARTNLILAGLMFATWETIDIFWISFPAAAAVFAVLFFGSTLWFWRRDSIRAAIALALLFAFEGAVAPTLKAMTVTKVADLALALTGLALAITVVVTRRERTSPAVVA
Ga0207663_1062111123300025916Corn, Switchgrass And Miscanthus RhizosphereMSNTRTGLIVAGLTFATWEAVDIFWISVPAFAAVFAALFLGSTLWFWRRNSPRAAAVLIALFAFEGVVAPTLRAMTVTKVADFTLALAGVLLAVVVLVTRRGSRPPRAVGARRAVRPSTE
Ga0207663_1155822413300025916Corn, Switchgrass And Miscanthus RhizosphereMSTRTGLILAGLTFASWEAIDIFWISVPAAAAVFAALFLGSSMWFWRRNSLRAALALMLLFAFEAAVAPTLRAMTVTKVADLTLALTGIALATTVVVKRRRTRASWPVSARRHGAHAWRSLTPRQRNRAATNARS
Ga0207660_1053092313300025917Corn RhizosphereVVTARNALILAGLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWGAGALLALFVFEGAVAPTLKAETVTKVADLALAIVGFVLAAIVIVQRRRGQAPAASSG
Ga0207700_1085909613300025928Corn, Switchgrass And Miscanthus RhizosphereMSTRTGLILAGLTFASWEAIDIFWISVPAAAAVFAALFLGSSMWFWRRNSLRAALALMLLFAFEAAVAPTLRAMTVTKVADLTLALTGIALAATVVVKRRRTRASWPVSARRHGAHAWRSLTPRQRNRAATNARSIPQLRKESR
Ga0207686_1017743313300025934Miscanthus RhizosphereLPGLSFATWETFDIFWISFPAAAAIFAALFLSTTLWFQRRNSVRAAVALGMLFAFEGAVAPTLRVMTVTKVADFTIALAGALLTITLLATKYRTKTARESPPTIAQQPGDLGTQTF
Ga0207665_1122685723300025939Corn, Switchgrass And Miscanthus RhizosphereMSTRTGLILAGLTFASWEAIDIFWISVPAAAAVFAALFLGSSMWFWRRNSLRAALALMLLFAFEAAVAPTLRAMTVTKVADLTLALTGIALATTVVVKRRRTRASWPVSARRHGAHA
Ga0207702_1087389213300026078Corn RhizosphereTEGVHVVTARNALILAGLAFGTWEFVDIFWISTPAVAAVMAVLFLGCTIWYWRRDSLWAAGALLALFVFEGAVAPTLKAETVTKVADLALAIVGFVLAAIVIVQRRRGQAPAASSG
Ga0209471_104343233300026318SoilMLNSRTALILAGLTFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTGIALAITVVVARRRGRASRPVSAY
Ga0209152_1047212813300026325SoilAIWETIDIFWISFPAAAAVFAALFLSGTLWFWRRDSVRAALALMLLFAFEAAVAPTLGAMTVTKVADFTVALTGIALAITVVVTRRRTRATRPVSA
Ga0209473_123482213300026330SoilMLNSRAALILAGLMFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRAALVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTGIVLAITVVVARRRTRASRPVSA
Ga0209805_113193213300026542SoilMFNPRIALILTGLTFAIWETIDIFWISFPAAAAVFAALFLSGTLWFWRRDSVRAALALMLLFAFEAAVAPTLGAMTVTKVADFTVALTGIALAITVVVTRRRTRATRPVSA
Ga0209156_1037393613300026547SoilTFATWETVDIFWISFPAAAAVFAALFLVSTIWLWRRDSVRATLVLLLLFAFEAAVAPTLGAMTVTKVADLTLALTGIVLAITVVVARRRTRASRPVSA
Ga0209577_1085032013300026552SoilAGLTFATWETIDIFWISFPAAAALFAALFLSGTLWLWRRDSLRAALALMLLFAFEAAVAPTLRAMTVTKVADLTLALTGIALAITVVVTRRRTRASRPVSA
Ga0209811_1003135733300027821Surface SoilVFNTRVALILAGLAFAIWETIDIFWISFPAAAAVFAALFLGGTLWLWRRSSVRAALVLLLLFAFEAAVAPTLRAMTVTKVVDLALALTGIALAMTVVVTRPRTRASQPVSA
Ga0307277_1009900313300028881SoilMNARIGLILAGLAFAIWETVDIFWISFPAAAAVFAALFLGCTFWFWRRESQRAAVALMLLFAFEGVVAPTLKAMTVTKLADLALTIAGVAFAVTVLVAAWHGRRSRGHRLAQIG
Ga0307497_1074708813300031226SoilALKSDLERNKPMFNARIALILAGLAFATWETIDIFWISFPAAAAVFAGLFLGGTLWLWRRNSVHAALVLLLLFAFEAAVAPTLRAMTVTKVADLTLALTGMALALTVVATRRRTRASRPVSV
Ga0307468_10003392733300031740Hardwood Forest SoilMFNARIALILAGLAFATWEAIDVFWISVPAVAAVFAVLFLGGTLWLWRRNSVGAALVLLLLFAFEAAVAPTLRAMTVTKVADLTLALTGVALAMTVVVRPRRTRASRPVSA
Ga0307468_10171162213300031740Hardwood Forest SoilVFNTRVALILAGLAFAIWETIDIFWISFPAAAAVFAALFLGGTLWLWRRNSVRAALVLLLLFAFEAAVAPTLRAMTVTKVVDLALAFTGIALAMTVVVTRRRTRASQPVSA
Ga0308174_1036270623300031939SoilMVNARSALILAGLAFGTWEAVDIFWISTPAVAAVMAVLFFACTIWYWRRDSLWAAVALLVLFAFEGAVAPTLKAMTVTKAADLALAIVGVVLAVTVLVGRRRGQASPAVGESRSG
Ga0307470_1021408633300032174Hardwood Forest SoilVFNTRVALILAGLAFAIWEMIDIFWISFPAAAAVFAALFLGGTLWLWRRDSVRAALALLLLFAFEAAVAPTLRAMTVTKVADLSLALTGVALAITVV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.