Metagenome / Metatranscriptome Family F068272

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Overview

Basic Information
Family ID	F068272
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	55 residues
Representative Sequence	MTRSRPTIELKAVESSAVRESIDRAKKAEREGRWADACAIYESLVRDPG
Number of Associated Samples	114
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	37.60 %
% of genes near scaffold ends (potentially truncated)	98.40 %
% of genes from short scaffolds (< 2000 bps)	89.60 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.200 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.200 % of family members)
Environment Ontology (ENVO)	Unclassified (31.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.600 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.35% β-sheet: 0.00% Coil/Unstructured: 50.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13424	TPR_12	27.20
PF13374	TPR_10	5.60
PF02954	HTH_8	4.00
PF13181	TPR_8	2.40
PF00515	TPR_1	2.40
PF13414	TPR_11	1.60
PF00791	ZU5	1.60
PF10502	Peptidase_S26	0.80
PF13176	TPR_7	0.80
PF01121	CoaE	0.80
PF02368	Big_2	0.80
PF13365	Trypsin_2	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0237	Dephospho-CoA kinase	Coenzyme transport and metabolism [H]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	92.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	92.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	91.20 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	91.20 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	91.20 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	91.20 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	91.20 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.80 %
Unclassified	root	N/A	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig203768	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1256	Open in IMG/M
3300000886\|AL3A1W_1171553	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300001305\|C688J14111_10080148	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	992	Open in IMG/M
3300001359\|A3035W6_1143369	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1367	Open in IMG/M
3300001397\|JGI20177J14857_1022520	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	812	Open in IMG/M
3300001535\|A3PFW1_10215931	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	956	Open in IMG/M
3300001536\|A1565W1_11124746	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300002025\|smpD1_1023673	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1971	Open in IMG/M
3300002915\|JGI25387J43893_1014250	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1092	Open in IMG/M
3300004114\|Ga0062593_100030168	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3070	Open in IMG/M
3300004114\|Ga0062593_101436860	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	739	Open in IMG/M
3300004156\|Ga0062589_102191918	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	565	Open in IMG/M
3300004157\|Ga0062590_101222658	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	734	Open in IMG/M
3300004479\|Ga0062595_100041803	All Organisms → cellular organisms → Bacteria	2010	Open in IMG/M
3300005172\|Ga0066683_10646499	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	635	Open in IMG/M
3300005178\|Ga0066688_10967588	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	521	Open in IMG/M
3300005187\|Ga0066675_10273036	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1215	Open in IMG/M
3300005336\|Ga0070680_100013444	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6374	Open in IMG/M
3300005338\|Ga0068868_101030011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	754	Open in IMG/M
3300005341\|Ga0070691_10060680	All Organisms → cellular organisms → Bacteria	1818	Open in IMG/M
3300005343\|Ga0070687_101033688	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	597	Open in IMG/M
3300005364\|Ga0070673_100133932	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2083	Open in IMG/M
3300005439\|Ga0070711_100327669	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1225	Open in IMG/M
3300005457\|Ga0070662_101584319	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	565	Open in IMG/M
3300005459\|Ga0068867_100599072	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	961	Open in IMG/M
3300005543\|Ga0070672_100770639	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	845	Open in IMG/M
3300005547\|Ga0070693_100139716	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1523	Open in IMG/M
3300005549\|Ga0070704_100725088	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	883	Open in IMG/M
3300005552\|Ga0066701_10035412	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2636	Open in IMG/M
3300005568\|Ga0066703_10079989	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1889	Open in IMG/M
3300005576\|Ga0066708_10003834	All Organisms → cellular organisms → Bacteria	6161	Open in IMG/M
3300005718\|Ga0068866_10036302	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2414	Open in IMG/M
3300005874\|Ga0075288_1041681	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	697	Open in IMG/M
3300005980\|Ga0066798_10058630	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1193	Open in IMG/M
3300006173\|Ga0070716_100411498	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	975	Open in IMG/M
3300006175\|Ga0070712_101833146	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300006871\|Ga0075434_100028222	All Organisms → cellular organisms → Bacteria	5513	Open in IMG/M
3300006903\|Ga0075426_10020581	All Organisms → cellular organisms → Bacteria	4717	Open in IMG/M
3300007004\|Ga0079218_10970681	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	846	Open in IMG/M
3300007076\|Ga0075435_100399900	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1181	Open in IMG/M
3300007819\|Ga0104322_135979	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1863	Open in IMG/M
3300009012\|Ga0066710_102273675	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	789	Open in IMG/M
3300009038\|Ga0099829_11461005	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	565	Open in IMG/M
3300010329\|Ga0134111_10403445	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	586	Open in IMG/M
3300010373\|Ga0134128_12346397	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	588	Open in IMG/M
3300010375\|Ga0105239_11382401	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	813	Open in IMG/M
3300011332\|Ga0126317_10811451	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1442	Open in IMG/M
3300011996\|Ga0120156_1058731	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	697	Open in IMG/M
3300011998\|Ga0120114_1059246	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	745	Open in IMG/M
3300011999\|Ga0120148_1004400	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4088	Open in IMG/M
3300011999\|Ga0120148_1030183	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1167	Open in IMG/M
3300012004\|Ga0120134_1025666	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	958	Open in IMG/M
3300012200\|Ga0137382_10238467	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1258	Open in IMG/M
3300012200\|Ga0137382_10915214	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	632	Open in IMG/M
3300012203\|Ga0137399_10819520	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	784	Open in IMG/M
3300012208\|Ga0137376_10188875	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1781	Open in IMG/M
3300012211\|Ga0137377_10262312	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1658	Open in IMG/M
3300012684\|Ga0136614_10117027	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2020	Open in IMG/M
3300012907\|Ga0157283_10137442	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	704	Open in IMG/M
3300013100\|Ga0157373_10131959	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1757	Open in IMG/M
3300013100\|Ga0157373_11267568	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300013104\|Ga0157370_11127782	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	708	Open in IMG/M
3300013307\|Ga0157372_10894173	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1030	Open in IMG/M
3300013307\|Ga0157372_11250527	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	857	Open in IMG/M
3300013503\|Ga0120127_10009551	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1588	Open in IMG/M
3300013770\|Ga0120123_1077046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	740	Open in IMG/M
3300014052\|Ga0120109_1136392	Not Available	573	Open in IMG/M
3300014487\|Ga0182000_10522858	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300015164\|Ga0167652_1004310	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3452	Open in IMG/M
3300017792\|Ga0163161_11798394	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	545	Open in IMG/M
3300018000\|Ga0184604_10034401	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1311	Open in IMG/M
3300018028\|Ga0184608_10101746	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1200	Open in IMG/M
3300018054\|Ga0184621_10289183	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	579	Open in IMG/M
3300018071\|Ga0184618_10065393	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1358	Open in IMG/M
3300018071\|Ga0184618_10406908	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	576	Open in IMG/M
3300018468\|Ga0066662_11139958	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	783	Open in IMG/M
3300019868\|Ga0193720_1015840	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1059	Open in IMG/M
3300019870\|Ga0193746_1031960	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	533	Open in IMG/M
3300020002\|Ga0193730_1036491	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1424	Open in IMG/M
3300020006\|Ga0193735_1024470	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1861	Open in IMG/M
3300020015\|Ga0193734_1009473	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1818	Open in IMG/M
3300020022\|Ga0193733_1145279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	644	Open in IMG/M
3300020022\|Ga0193733_1182649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	549	Open in IMG/M
3300020061\|Ga0193716_1198094	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	766	Open in IMG/M
3300021078\|Ga0210381_10291865	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	587	Open in IMG/M
3300021344\|Ga0193719_10310661	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	660	Open in IMG/M
3300021344\|Ga0193719_10441469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	531	Open in IMG/M
3300021363\|Ga0193699_10419578	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	553	Open in IMG/M
3300021413\|Ga0193750_1076811	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	633	Open in IMG/M
3300022756\|Ga0222622_10334404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1051	Open in IMG/M
3300023058\|Ga0193714_1031964	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	772	Open in IMG/M
3300025581\|Ga0208355_1057536	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	927	Open in IMG/M
3300025899\|Ga0207642_10102847	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1438	Open in IMG/M
3300025905\|Ga0207685_10721454	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300025916\|Ga0207663_10284415	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1230	Open in IMG/M
3300025917\|Ga0207660_10055094	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2840	Open in IMG/M
3300025917\|Ga0207660_10742821	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	801	Open in IMG/M
3300025933\|Ga0207706_10848036	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	774	Open in IMG/M
3300025933\|Ga0207706_11322711	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	595	Open in IMG/M
3300026075\|Ga0207708_11172415	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	671	Open in IMG/M
3300026301\|Ga0209238_1093333	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1030	Open in IMG/M
3300026310\|Ga0209239_1374087	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	501	Open in IMG/M
3300026315\|Ga0209686_1037586	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1826	Open in IMG/M
3300026323\|Ga0209472_1249455	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	568	Open in IMG/M
3300027462\|Ga0210000_1030198	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	846	Open in IMG/M
3300027587\|Ga0209220_1048116	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1139	Open in IMG/M
3300027643\|Ga0209076_1166717	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300028705\|Ga0307276_10098809	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	704	Open in IMG/M
3300028705\|Ga0307276_10156768	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	582	Open in IMG/M
3300028716\|Ga0307311_10249977	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	527	Open in IMG/M
3300028719\|Ga0307301_10114001	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	861	Open in IMG/M
3300028768\|Ga0307280_10325474	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	564	Open in IMG/M
3300028784\|Ga0307282_10466685	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	613	Open in IMG/M
3300028796\|Ga0307287_10086607	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1177	Open in IMG/M
3300028876\|Ga0307286_10158134	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	814	Open in IMG/M
3300031231\|Ga0170824_117966080	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	506	Open in IMG/M
3300031720\|Ga0307469_11121709	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	740	Open in IMG/M
3300031820\|Ga0307473_10768764	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	684	Open in IMG/M
3300031854\|Ga0310904_11444214	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	501	Open in IMG/M
3300031908\|Ga0310900_10396256	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1047	Open in IMG/M
3300032002\|Ga0307416_101910605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	697	Open in IMG/M
3300033412\|Ga0310810_10816287	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	839	Open in IMG/M
3300033475\|Ga0310811_10898735	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	800	Open in IMG/M
3300034178\|Ga0364934_0223545	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	713	Open in IMG/M
3300034268\|Ga0372943_0555631	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	751	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.20%
Host-Associated	Host-Associated	16.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.00%
Plants	Host-Associated → Plants	16.80%
Aquatic	Environmental → Aquatic	7.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.00%
Sediment	Environmental → Aquatic → Sediment	4.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.80%
Freshwater	Environmental → Aquatic → Freshwater	2.40%
Floodplain	Environmental → Terrestrial → Floodplain	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.80%
Loam	Environmental → Terrestrial → Soil → Loam	12.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.80%
Ice	Environmental → Aquatic → Freshwater → Ice	0.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	12.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.20%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.60%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.80%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.20%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	9.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.20%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.40%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.80%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.80%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.80%
Permafrost Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.80%
Permafrost And Active Layer Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost And Active Layer Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.80%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.80%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
3300000886	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illumina	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001359	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-35cm)- 6 month illumina	Environmental	Open in IMG/M
3300001397	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300002025	Permafrost and active layer soil microbial communities from McGill Arctic Research Station (MARS), Canada, for enrichment studies - Sample_D1	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005980	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007819	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 Soapdenovo	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015164	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019870	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_03282480	2124908032	Soil	MSNQRHTVELKAVESSAVRESIDRAKQAERDGRWADACAVYESLVRDPATM
AL3A1W_11715533	3300000886	Permafrost	MTLRRPTVEVKAVESTAVNESVDRAKLAEREGRWADACAIYEQLVRNPHVHASTRLAVL
C688J14111_100801481	3300001305	Soil	MTNQRPTIELRAVESSAVRESIDRAKQAERDGRWLDACQIYESLVRDPDANSDTRVAALRWLGRAYLEQGNRAAA
A3035W6_11433692	3300001359	Permafrost	MTLRRPTVEVKAVESTAVNESVDRAKLAEREGRWADACAIYEQLVRNPHVHASTRLAVLRWLGRAYICLLYTSPSPRDRT
JGI20177J14857_10225201	3300001397	Arctic Peat Soil	LKAVESSSVRESIDRAKHAERDGRWADACAVYESLVRDPATM
A3PFW1_102159312	3300001535	Permafrost	MSNQRHTVELKAVESSAVRESIDRAKQAERDGRWADACAVYESLVRDPATMATTRL
A1565W1_111247462	3300001536	Permafrost	MIGRRPSVEMQAMEPAVVKERIDRAKQAEREGRWTDACALYEQLVRDPDANAHTRLAALR
smpD1_10236733	3300002025	Permafrost And Active Layer Soil	MIGRRPSVEMQAMEPAVVKERIDRAKQAEREGRWTDACALYEQLVRDPD
JGI25387J43893_10142502	3300002915	Grasslands Soil	MTKNRPTIELKAVESSAVRESIDRAKKAEREGRWADACAVYES
Ga0062593_1000301681	3300004114	Soil	MTNRPTVELKAVESSTVRESIDRAKQAEREGRWAEACSIYEALVRDPAAHASTRLAALR
Ga0062593_1014368602	3300004114	Soil	MTNRRPTVELQAAESSVVRNSIERAKQAEREGRWADACSLYEQLVRNPDAHASTRLAVF
Ga0062589_1021919181	3300004156	Soil	LKAVESSTVRESIDRAKQAEREGRWAEACSIYEALVRDPAAHASTRLAALRWLGRAYLEQGNRGAALDVLE
Ga0062590_1012226581	3300004157	Soil	MTNHRPTIELKAVESSAVREAIDRAKHAEREGRWADACTVYEDLVRDPGT
Ga0062595_1000418031	3300004479	Soil	MTNSRPTIELRAFESSAVRAGIDRAKHAEREGRWADACAIYESLVRDPDAHADTRLAALRWLGRAYLEQ
Ga0066683_106464992	3300005172	Soil	MTNSRPTVELKAVESSTVRNSIERAKRAEHEGRWADACAIYETLVRNPDALANTRLAALRWLGRAYL
Ga0066688_109675882	3300005178	Soil	MTKSRPTIELRAVESSAVRAQIDRAKHAEREGRWADACASYEALIRDPDA
Ga0066675_102730362	3300005187	Soil	MTRSRPTIELKALESSTVRESIDRAKKAERDGRWADACAIYESLVREPDANVDTRLAALRWLGRAYLEQG
Ga0070680_1000134448	3300005336	Corn Rhizosphere	MMNRRPTIELKAAESSVVRDSIERAKQAEREGRWADACSVYEQLVRNPDAHASTRLAVLRWLGRAYMEQGNRGA
Ga0068868_1010300112	3300005338	Miscanthus Rhizosphere	MTNRPTIELKAVESSSVRENIDLAKQAEREGRWADACGIYE
Ga0070691_100606803	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MTNRHTIELKAVESSAVRENIDLAKKAEREGRWADACAIYETLVRDPNANATTRLAALRW
Ga0070687_1010336882	3300005343	Switchgrass Rhizosphere	MTNRPTIELKAVESSTVRENIDLAKQAEREGRWADACGIYERMVRD
Ga0070673_1001339321	3300005364	Switchgrass Rhizosphere	MSKSRPTIELKAVESSTVRQSIDRAKAAERDGRWGDACAVYEALVRDPDAHASTRLAALRWLGRAYLEQ
Ga0070711_1003276692	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MINRPTIELKAVESSTVREYIDLAKAAEHEGRWGDACVLYERLVRDPGALA
Ga0070662_1015843192	3300005457	Corn Rhizosphere	LKAVESSTVRESIDRAKQAEREGRWAEACSIYEALVRDPAAHASTRLAALRWLGRAYLE
Ga0068867_1005990721	3300005459	Miscanthus Rhizosphere	MTNRHTIELKAVESSVVRENIDRAKKAEREGRWADACAIYETLVRD
Ga0070672_1007706391	3300005543	Miscanthus Rhizosphere	MTNRHTIELKAVESSAVRENIDLAKKAEREGRWADACA
Ga0070693_1001397162	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LKAAESSVVRDSIERAKQAEREGRWADACSVYEQLVRNPDAHASTRLAVLRWLGRAYMEQGNRGAALD
Ga0070704_1007250882	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MMNRRPTIELKAAESSVVRDSIERAKQAEREGRWADACSLYEQLVRNPDAHASTRLAVLRWLGRAYMEQGNRGA
Ga0066701_100354121	3300005552	Soil	MTNRRPTVELKAVESSTVRESIDRAKRAEREGRWADACAEYEQLVRD
Ga0066703_100799891	3300005568	Soil	MTKSRPTIELRAVESSAVRAQIDRAKHAEREGRWAD
Ga0066708_100038348	3300005576	Soil	MTNSRPTIELMAVESSAVRESIDRAKHAERDGRWADACAIYETLVRDPDANSDTRLAA
Ga0068866_100363021	3300005718	Miscanthus Rhizosphere	MTNRHTIELKAVESSVVRENIDRAKKAEREGRWADACAIYETLVRDPNANATTR
Ga0075288_10416812	3300005874	Rice Paddy Soil	MTNRPTVELKAVESSAVRESIDRAKQAEREGRWAEA
Ga0066798_100586302	3300005980	Soil	MTNHRPTVELKAVESSSVRESIDRAKHAERDGRWADACAVYESLVRDPGTMPTTRLAALRWLGRA
Ga0070716_1004114982	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTNQRPTIELRAVESSAVRESIDRAKQAERDGHWAEACAIYESLVRDPDANSN
Ga0070712_1018331462	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTLRPPTVELPAADSPAVREAIDRAKQAEREGRWADACALYELLVRDPDAHPHTRLAALRWLGRAYLEQ
Ga0075434_1000282227	3300006871	Populus Rhizosphere	MTNRPTIELKAVESSTVRENIDLAKQAEREGRWADACGIYERMVRDPSTQAATRL
Ga0075426_100205811	3300006903	Populus Rhizosphere	MINRPTIELKAVESSTVREYIDLAKAAEHEGRWGDACVLYERLVR
Ga0079218_109706812	3300007004	Agricultural Soil	MTNRRPTVEVKAAESAAIRDSIERAKHAEREGRWAEACAIYE
Ga0075435_1003999002	3300007076	Populus Rhizosphere	MINRPTIELKAVESSTVREYIDLAKAAEHEGRWGD
Ga0104322_1359791	3300007819	Permafrost Soil	MTNLRPTVELKAVESSTVRESIDRAKQAERDGRWADACAIYENLLRDPGTLATTRL
Ga0066710_1022736752	3300009012	Grasslands Soil	MTNRRPTVELKAVESSTVRESIDRAKRAEREGRWAD
Ga0099829_114610051	3300009038	Vadose Zone Soil	MTNRRPTVELRAVESSTVRDSIDRAKQAERDGRWADACAVYESLVR
Ga0134111_104034452	3300010329	Grasslands Soil	MTNSRPTVELKAVESSAVRDSIERAKRAEHEGRWADACAIYETLVRNPDALAN
Ga0134128_123463971	3300010373	Terrestrial Soil	MTNLRPTVEVKALESSAVRESIDRAKQAERHGRWADACAIYQNLVRDP
Ga0105239_113824012	3300010375	Corn Rhizosphere	MTNLRPTVELKAVESSAVRESIDRAKQAERDGRWADACAIYESLVRD
Ga0126317_108114512	3300011332	Soil	MVKSRPTIELKAVESSTVRQSIDRAKNAEREGRWSEACAIYETLVRDPAANATTRLAALRWLGRGYLEQGNRG
Ga0120156_10587312	3300011996	Permafrost	MTLRRPTVEVKAVESTAVNESVDRAKLAEREGRWADACAIYEQLVRNPHVHASTRLAVLRWLGRA
Ga0120114_10592461	3300011998	Permafrost	MTHRRPATESRSADSTAVKESVDRAKLAEREGRWADACALYEQLVRNPDVHASTRLA
Ga0120148_10044001	3300011999	Permafrost	MTTARPTVEIRAVESPAVKECIDRAKQAEREGRWADACALYEQLVRDPAAHAHTRLAVLRWLGRAYLEQGNRG
Ga0120148_10301831	3300011999	Permafrost	MASRRSPTESRSAESTAVTESVNRAKLAERDGRWVDACAIYEELVRNPDVHASTRLAVLRWLGRAYMEQG
Ga0120134_10256661	3300012004	Permafrost	MNLRRPTSELKAVESSAVNESVDRAKLAEREGRWADACTIYERLVRNPDVHASTRLAVLR
Ga0137382_102384671	3300012200	Vadose Zone Soil	MTNHRPTIELKALESSTVRDAIDRAKHAEREGRWADACALYEELVRDPGANAN
Ga0137382_109152141	3300012200	Vadose Zone Soil	MMNRRPTVEVRAVESSAVRESIDRAKHAEREGRWADA
Ga0137399_108195203	3300012203	Vadose Zone Soil	MINRRPTVEVRAVESSAVRESIDRAKHAEREGRWAEACAVYEQLVRDPDALSTTRLAALRWLGRAYLEQG
Ga0137376_101888753	3300012208	Vadose Zone Soil	MTNRRPTIELKAAESPAIKETIERAKHAEREGHWAEACAIYEQLVRDPAAHANTRLAALRWLGRAYLEQGNRGAAL
Ga0137377_102623123	3300012211	Vadose Zone Soil	MTNHRPTVEIRAVESPAVKESIDRAKQAEREGRWADACALYERLVRDPEAHAQTRLAVLRWLGRA
Ga0136614_101170271	3300012684	Polar Desert Sand	MIPARPTVQIRAAESPAVREMMDRAKKCERDGRWADACALYEALIRNPEVRTPTRLGALRWLARAFSSAGCSR*
Ga0157283_101374421	3300012907	Soil	MTNRHTIELKAVESSVVRENIDRAKKAEREGRWADACAIYETLVRDPNANATTRLAA
Ga0157373_101319593	3300013100	Corn Rhizosphere	MINRPTIELKAVESSTVREYIDLAKAAEHEGRWGDACGLYERLVRDPG
Ga0157373_112675681	3300013100	Corn Rhizosphere	MTNRRPTIELKAGESPAIKETIERAKHAEREGRWAEACTIYEQLVRDPAAHPNTRLA
Ga0157370_111277822	3300013104	Corn Rhizosphere	MTNLRPTVELKAVESSAVRESIDRAKQAERDGRWADACAIYESLVRDPGTLASTRLAALRWLGRAYLEQGNRG
Ga0157372_108941731	3300013307	Corn Rhizosphere	MTNRPTVELKAVESSTVRESIDRAKQAEREGRWAEACSIYEAL
Ga0157372_112505271	3300013307	Corn Rhizosphere	MMNRRPTIELKAAESSVVRDSIERAKQAEREGRWADAC
Ga0120127_100095512	3300013503	Permafrost	MTNLRPTVELKAVESSAVRESIDRAKQAERDGRWADAGAIY
Ga0120123_10770462	3300013770	Permafrost	MTNRRPTVELRAVESSTVRDSIDRAKQAERDGRWADACAVYESLVRDPD
Ga0120109_11363921	3300014052	Permafrost	MTHRRPATESRSADSTAVKESVDRAKLAEREGRWADACAI
Ga0182000_105228582	3300014487	Soil	MTNRPTIELKAVESSTVRENIDLAKKAEREGRWADACAIYERMVRDPSTQAGTRLAALRWLG
Ga0167652_10043101	3300015164	Glacier Forefield Soil	MSLRRPTTELKALESTAVNETVDRAKLAEREGRWADACAIYEQLVRNPDVHASTRL
Ga0163161_117983942	3300017792	Switchgrass Rhizosphere	MTNRHTIELKAVESSVVRENIDRAKKAEREGRWADACAI
Ga0184604_100344012	3300018000	Groundwater Sediment	MTNRRPTIELKAAESPAIKETIERAKHAEREGRWAEACTIYEQLIRDPGAHPNTRLAALRWLGRAYV
Ga0184608_101017462	3300018028	Groundwater Sediment	MTNLRPTIELKAAESSAIKETIERAKHAEREGRWA
Ga0184621_102891831	3300018054	Groundwater Sediment	LKAAESSAIKETIERAKHAEREGHWAEACAIYEQLVRDPAAHANTRLAALRWLGRAYLEQGNRGAALDVL
Ga0184618_100653931	3300018071	Groundwater Sediment	MTKLWSTIELKAAESPAIKESIERAKHAEREGRWADACALYEGLIRDPDAHANTR
Ga0184618_104069082	3300018071	Groundwater Sediment	MELKAAESPAIRNSIDSAKHAEREGRWADACALYERLVRDPDANADTRLAALRWLGRAYLEQG
Ga0066662_111399581	3300018468	Grasslands Soil	MTKSRPTIELRAVESSAVRAQIDRAKHAEREGRWADACASYEALIRDPDANPDTRLAALRWLGRA
Ga0193720_10158402	3300019868	Soil	MTNRRPTIELKAAESSAIKETIERAKHAEREGRWAEACAIYEELVRDPAA
Ga0193746_10319602	3300019870	Soil	MTNLRPTVELKAVESSAVRDSIDRAKQAERDGRWADA
Ga0193730_10364911	3300020002	Soil	MTNRRPTVELRAVESSTVRDSIDRAKQAERDGRWADACAVYETLVRDPDTLATTRLAALRWL
Ga0193735_10244701	3300020006	Soil	MTNRSTIELKAFASPDIKKSIELAKNAEHEGRWAEACVLYEGLVRNPDADANTRLAVLR
Ga0193734_10094731	3300020015	Soil	MTNLRPTIELKAAESSAIKETIERAKHAEREGHWAEACAIYEQLVRDPAAHANTRLAALRWLGRA
Ga0193733_11452792	3300020022	Soil	MTNLRPTVELKAVESSAVRESIDRAKQAERDGRWADACAIYENLVRDPGTLATTR
Ga0193733_11826491	3300020022	Soil	MTNRSTIELKAFASPAIKKSIELAKNAEHEGRWAEACALYETLVRNPDADANTRLAALRWLGRAYLEQGNRG
Ga0193716_11980941	3300020061	Soil	MTNHRPTIELKAVESSSVRESIDRAKHAEREGRWADACTVYENLVRDPDTLATTRIA
Ga0210381_102918651	3300021078	Groundwater Sediment	MTNLRPTIELKAAESSAIKETIERAKHAEREGRWAEACAIYEKLVRDP
Ga0193719_103106612	3300021344	Soil	MGALRDDRCAVMTNLRPTIELKAVESSAVRESIDLAKQAERDGRWADACAVYEALVRDPSTLATT
Ga0193719_104414691	3300021344	Soil	LRVVMTNLRPTVELKAVESSAVRESIDRAKQAERDGRWADACAIYENLVRDPGTLATTRLAALRWL
Ga0193699_104195782	3300021363	Soil	MTLRRPTAEVKAVESTAVNESVDRAKLAEREGRWADACGIYELLVRNPH
Ga0193750_10768112	3300021413	Soil	VELKAVESTAVNESVDRAKLAEREGRWADACAIYERLVRNPDVHASTRLAVLRWLGRAYMEQ
Ga0222622_103344041	3300022756	Groundwater Sediment	MTNLRPTIELKAAESSAIKETIERAKHAEREGRWAEACA
Ga0193714_10319642	3300023058	Soil	MTNRSTIELKAFASPDIKKSIELAKNAEHEGRWAEACALYESLVRDPEADSNTRLAVL
Ga0208355_10575361	3300025581	Arctic Peat Soil	MSNQRHTVELKAVESSAVRESIDRAKQAERDGRWADACAVYESLVRDPATMATTRLAALRWLGRAY
Ga0207642_101028472	3300025899	Miscanthus Rhizosphere	VESSTVRESIDRAKQAEHDGRWADACAIYEALVRDPSANANTRLAALR
Ga0207685_107214542	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTNRRPTIELRAVESSTVRENIDRAKHAEREGRWADACGIY
Ga0207663_102844151	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MINRPTIELKAVESSTVREYIDLAKAAEHEGRWGDACVLYERLVRDPGALAHTRLAALRW
Ga0207660_100550941	3300025917	Corn Rhizosphere	MTNRRPTIELRAVESSTVRENIDRAKHAEREGRWADACGIYEALVRDPGANASTRLAALRWLGRAYLEQGNRGAAL
Ga0207660_107428211	3300025917	Corn Rhizosphere	MTNLRPTVELKAVESSAVRESIDRAKQAERDGRWADACAIYESLVRDPGTLASTRLAALRWLGR
Ga0207706_108480362	3300025933	Corn Rhizosphere	MTNRHTIELKAVESSVVRENIDRAKKAEREGRWADACAIYETLVRDPNANATTRLAALRRLGRAYLEQGN
Ga0207706_113227112	3300025933	Corn Rhizosphere	MTNRPTVELKAVESSTVRESIDRAKQAEREGRWAEACSIYEALVRDPAAHASTRLAALRWLGRAYLE
Ga0207708_111724151	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSRSRPTIELKAVESSTVRESIDRAKHAEHDGRWADACAIYEALVRDPAANASTRLA
Ga0209238_10933331	3300026301	Grasslands Soil	MTNRPTIELKAVESSAIRDHIDRAKQAEREGRWADACEVYENLV
Ga0209239_13740872	3300026310	Grasslands Soil	MTNRRPTVELKAVESSTVRESIDRAKRAEREGRWADACAEYEQLVRDCD
Ga0209686_10375863	3300026315	Soil	MTRSRPTIELKAVESSAVRESIDRAKKAEREGRWADACAIYESLVRDPG
Ga0209472_12494552	3300026323	Soil	MTNRPTIELKAVESSAIRDHIDRAKQAEREGRWADACEVYENLVRDPEANVSTRLAALRWLGRAYLEQGNRAA
Ga0210000_10301982	3300027462	Arabidopsis Thaliana Rhizosphere	MTNSRPTIELKAAESPAVKQSIERAKHAEHEGRWADACAIYERLVRDPAAHANTRLAALR
Ga0209220_10481161	3300027587	Forest Soil	MSPRRSAEDSKSVESTAVNESVDRAKLAEREGRWADACAIYEELVRNPHVHASTRLAVLRWLGRSYMEQGN
Ga0209076_11667172	3300027643	Vadose Zone Soil	MSLRRATVQVKAVESTAVNQSVDRAKLAEREGRWTDACAIYEQLVRNPHVHASTRLAVLRWLGRAYMEQG
Ga0307276_100988092	3300028705	Soil	MTNRRPTIELKAAESPAIKETIERAKHAEREGHWAEACAIY
Ga0307276_101567682	3300028705	Soil	MTNRPTVELKAVESSTVRESIDLAKKAEREARWGDACAIYEKLVRDPG
Ga0307311_102499772	3300028716	Soil	MTNRTPTIESKAAESSAIKNTIDRAKHAERQGRWADACSIYEHLVRD
Ga0307301_101140011	3300028719	Soil	MTNRRPTIELKAAESSAIKETIERAKHAEREGHWAEACAIYEQLVRDPAA
Ga0307280_103254742	3300028768	Soil	MTTARPTVEIRAVESPAVKECMDRAKQAEREGRWADACTLYEQLVRDPDAHAHT
Ga0307282_104666852	3300028784	Soil	MTNRSTIELKAFASPDIKKSIELAKNAEHEGRWAEACVLYEGLVRNPDADANT
Ga0307287_100866072	3300028796	Soil	MTNRRPTIELKAAESSAIKETIERAKHAEREGHWAEAC
Ga0307286_101581341	3300028876	Soil	MTNRRPTIELKAAESPAIKETIERAKHAEREGHWAEACAIYEQLVRDPAAH
Ga0170824_1179660802	3300031231	Forest Soil	LRVVMTNLRPTVEVKAVESSAVRESIDRAKQAERDGRWADA
Ga0307469_111217092	3300031720	Hardwood Forest Soil	MTNQRPTIELRAVESSAVRESIDRAKHAERDGHWAEACAIYESLVRDPEANSNTRLAALRWLGRA
Ga0307473_107687641	3300031820	Hardwood Forest Soil	MTKSRPTIELRAVESSAVRAEIDRAKHAEREGRWADACASYENLIRDPDANPETRLAALR
Ga0310904_114442141	3300031854	Soil	MSRSRPTIELKAVESSTVRESIDRAKQAEHEGRWADACAIYEALVRDPS
Ga0310900_103962561	3300031908	Soil	MSRSRPTIELKAVESSTVRESIDRAKQAEHEGRWADACAIYEALVRD
Ga0307416_1019106051	3300032002	Rhizosphere	MTNSRPTIELKAAESPAIKQSIERAKHAEHEGRWAEACAIYERLVRDPEAHANTRLAALRWL
Ga0310810_108162871	3300033412	Soil	MINRPTIELKAVESSTVREYIDLAKAAEHEGRWGDACVLYERLVRDPGALAHTRLAALRWLGRAYLEAG
Ga0310811_108987352	3300033475	Soil	MTNLRPTVELKAVESSAVRESIDRAKQAERDGRWG
Ga0364934_0223545_2_193	3300034178	Sediment	MTNRRPTIELKAAESSAIKESIDRAKHAEHEGRWADACAIYERLVRDPDAHSNTRLAVLRWLGR
Ga0372943_0555631_585_749	3300034268	Soil	MTNLRPTVELKAVESSAVRESIDRAKHAEREGRWAEACAIYEELVRDPGAHGTTR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068272

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences